CmoCh03G005700 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCCCACCTTCCCTCCTCCATTGCTTCCTTCCATAACGCAACCCATCTCATGATATTTGGCCATCATTTTTGACACCTTCCATTCCATCGCTCTTCCCTCTCACGCCAAGATCCAAAATCTGCAAATCAATCCCAGTTTCATTTCTCCAAATGATTCAGCTATTGTTCACGCTGATTGCATCGGAGATGCTTCTCATACTGCTCTTCTCCTTCAAGACCCCTCTCAGGAAGCTTGTCATATTGGCCGTCGATCGGATGAAGCGCGGACGCGGTCCCATTATGGTGAAAACCGTCGCCGGAACTGTTCTTATAGTTCTCCTTTCCAGTCTTAACAGTATGGTTACGATCCAGAAACGTTGGGTTGATGACGGTGCCGTCACCCCCACCGATCAGGTTCTCATGGTCAGACACCTTCTCGAGGCCACGCTCATGGGTAAACCCAACCTTTTCATTTTCTTCCGTGTTTCGATTCAAGATTTCCGACCTATCCATGTCTTTTCCCCTCATTGGTTTCCCCGTGTCTGAATTTGGCCTTGCCTTTTAGAATGTGGATTAGTTCTGGGAATGATTTGTCTGAAATCGTTGAGGAATTGCGCCCAAATTTAGAATGCGCTCGATTTGATTTCATTTGATTAAGCGGATTTGAATTGCGTATTTAGTTTCTAATGAATTTGGTGCTGTGGTATTCTGAGCTCATCAATTCAATCTTGCTTCACTGTTTCATTAGAGTGACATTAGCTCGTTAAATCATACGCATTCTTAATCGGTCTGCTTTGGCTATCCTTATGCATTAATTTAGAGCGTTTTTGTACAGAAGGATTGAGCATCTTGCCTTCACTTTATTACATAATTAAATAGATAGTTGATGGCTCTCTTCTTAGGTTATGAAAGCTTGTTATTTCTTTCAAGAACCCTTTAGTTTTGAATGGTGAAGGAGCTTGAAGTAGGTGAACAATTTGGTTGCAGGGGGGTCTCTATTCCTGGCACTTATGATTGATAGATTACATCATTACATGAGAGAGTTGCATATACGAAGAAAAGGCATGGAAGTCATAAAAAAGCAGAGCAGAGCGATGGAGGAAGGGAAAGTTAGCAGCAAGTCAGAGGAGATCAAAGCATTGGAAGAAGAGAGAACCAACCTGCAGACCAAACTCAAACACTTGGAATTGGAACTTGAGTCGAAGGCAAAAGATGTAAGTGCTTCAGAAGCCAATGTAGTTGCTCTAAGGAAGCAATCTGAAGGATTATTGCTTGAGTATGACCGTTTAGTTGAGGAAAACCAGAACCTTCGTAGCCAATTGCAATCCGTGGATCGCAGATTGTCTCGGTCGGGCAGCAAGAAGAACTCTTAAGGAACTGAATCTCACTTCTTCAAGTACAAAGGTAAAGCACTGAAACAAGAATGGATTCTCACTCAAAACTGAAAAGAATTGTGATAAATTTCATGTTTATTATAGAGAATATCTTCGCTTCTGTCATTCCTCTGTCTGTAGCTGCTTCTTTTTTCATTATATAAATATACCATGAAGAATTTGGCCTCTCAAAAACATAAGAATACATATTCTAAGGCAGACTCTAGTCTCCAGACAAGATATTCAGCTCAAATAAACAGAGATTCATCAACATCTTCACATTTTCATGATAAATCCAAATGTTTTCAATATATCTTAAGAAGGTAACACGAATTGAACCCCCACTGGCTAGAAACACAAGAA CGCCCACCTTCCCTCCTCCATTGCTTCCTTCCATAACGCAACCCATCTCATGATATTTGGCCATCATTTTTGACACCTTCCATTCCATCGCTCTTCCCTCTCACGCCAAGATCCAAAATCTGCAAATCAATCCCAGTTTCATTTCTCCAAATGATTCAGCTATTGTTCACGCTGATTGCATCGGAGATGCTTCTCATACTGCTCTTCTCCTTCAAGACCCCTCTCAGGAAGCTTGTCATATTGGCCGTCGATCGGATGAAGCGCGGACGCGGTCCCATTATGGTGAAAACCGTCGCCGGAACTGTTCTTATAGTTCTCCTTTCCAGTCTTAACAGTATGGTTACGATCCAGAAACGTTGGGTTGATGACGGTGCCGTCACCCCCACCGATCAGGTTCTCATGGTCAGACACCTTCTCGAGGCCACGCTCATGGGGGGGTCTCTATTCCTGGCACTTATGATTGATAGATTACATCATTACATGAGAGAGTTGCATATACGAAGAAAAGGCATGGAAGTCATAAAAAAGCAGAGCAGAGCGATGGAGGAAGGGAAAGTTAGCAGCAAGTCAGAGGAGATCAAAGCATTGGAAGAAGAGAGAACCAACCTGCAGACCAAACTCAAACACTTGGAATTGGAACTTGAGTCGAAGGCAAAAGATGTAAGTGCTTCAGAAGCCAATGTAGTTGCTCTAAGGAAGCAATCTGAAGGATTATTGCTTGAGTATGACCGTTTAGTTGAGGAAAACCAGAACCTTCGTAGCCAATTGCAATCCGTGGATCGCAGATTGTCTCGGTCGGGCAGCAAGAAGAACTCTTAAGGAACTGAATCTCACTTCTTCAAGTACAAAGGTAAAGCACTGAAACAAGAATGGATTCTCACTCAAAACTGAAAAGAATTGTGATAAATTTCATGTTTATTATAGAGAATATCTTCGCTTCTGTCATTCCTCTGTCTGTAGCTGCTTCTTTTTTCATTATATAAATATACCATGAAGAATTTGGCCTCTCAAAAACATAAGAATACATATTCTAAGGCAGACTCTAGTCTCCAGACAAGATATTCAGCTCAAATAAACAGAGATTCATCAACATCTTCACATTTTCATGATAAATCCAAATGTTTTCAATATATCTTAAGAAGGTAACACGAATTGAACCCCCACTGGCTAGAAACACAAGAA ATGATTCAGCTATTGTTCACGCTGATTGCATCGGAGATGCTTCTCATACTGCTCTTCTCCTTCAAGACCCCTCTCAGGAAGCTTGTCATATTGGCCGTCGATCGGATGAAGCGCGGACGCGGTCCCATTATGGTGAAAACCGTCGCCGGAACTGTTCTTATAGTTCTCCTTTCCAGTCTTAACAGTATGGTTACGATCCAGAAACGTTGGGTTGATGACGGTGCCGTCACCCCCACCGATCAGGTTCTCATGGTCAGACACCTTCTCGAGGCCACGCTCATGGGGGGGTCTCTATTCCTGGCACTTATGATTGATAGATTACATCATTACATGAGAGAGTTGCATATACGAAGAAAAGGCATGGAAGTCATAAAAAAGCAGAGCAGAGCGATGGAGGAAGGGAAAGTTAGCAGCAAGTCAGAGGAGATCAAAGCATTGGAAGAAGAGAGAACCAACCTGCAGACCAAACTCAAACACTTGGAATTGGAACTTGAGTCGAAGGCAAAAGATGTAAGTGCTTCAGAAGCCAATGTAGTTGCTCTAAGGAAGCAATCTGAAGGATTATTGCTTGAGTATGACCGTTTAGTTGAGGAAAACCAGAACCTTCGTAGCCAATTGCAATCCGTGGATCGCAGATTGTCTCGGTCGGGCAGCAAGAAGAACTCTTAA MIQLLFTLIASEMLLILLFSFKTPLRKLVILAVDRMKRGRGPIMVKTVAGTVLIVLLSSLNSMVTIQKRWVDDGAVTPTDQVLMVRHLLEATLMGGSLFLALMIDRLHHYMRELHIRRKGMEVIKKQSRAMEEGKVSSKSEEIKALEEERTNLQTKLKHLELELESKAKDVSASEANVVALRKQSEGLLLEYDRLVEENQNLRSQLQSVDRRLSRSGSKKNS Homology
BLAST of CmoCh03G005700 vs. ExPASy Swiss-Prot
Match: P51572 (B-cell receptor-associated protein 31 OS=Homo sapiens OX=9606 GN=BCAP31 PE=1 SV=3) HSP 1 Score: 51.2 bits (121), Expect = 1.7e-05 Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of CmoCh03G005700 vs. ExPASy Swiss-Prot
Match: Q5R8H3 (B-cell receptor-associated protein 31 OS=Pongo abelii OX=9601 GN=BCAP31 PE=2 SV=3) HSP 1 Score: 51.2 bits (121), Expect = 1.7e-05 Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of CmoCh03G005700 vs. ExPASy TrEMBL
Match: A0A6J1GEM5 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111453269 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CmoCh03G005700 vs. ExPASy TrEMBL
Match: A0A6J1IQW5 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111477947 PE=3 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 4.2e-103 Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of CmoCh03G005700 vs. ExPASy TrEMBL
Match: A0A5D3CMI8 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006320 PE=3 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92 Identity = 197/222 (88.74%), Postives = 211/222 (95.05%), Query Frame = 0
BLAST of CmoCh03G005700 vs. ExPASy TrEMBL
Match: A0A1S3AZQ0 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo OX=3656 GN=LOC103484623 PE=3 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92 Identity = 197/222 (88.74%), Postives = 211/222 (95.05%), Query Frame = 0
BLAST of CmoCh03G005700 vs. ExPASy TrEMBL
Match: A0A0A0KHS8 (Endoplasmic reticulum transmembrane protein OS=Cucumis sativus OX=3659 GN=Csa_6G513570 PE=3 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 4.8e-91 Identity = 194/222 (87.39%), Postives = 209/222 (94.14%), Query Frame = 0
BLAST of CmoCh03G005700 vs. NCBI nr
Match: XP_022950080.1 (B-cell receptor-associated protein 31-like [Cucurbita moschata]) HSP 1 Score: 392.1 bits (1006), Expect = 3.2e-105 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CmoCh03G005700 vs. NCBI nr
Match: KAG7033957.1 (B-cell receptor-associated protein 31 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 391.0 bits (1003), Expect = 7.0e-105 Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CmoCh03G005700 vs. NCBI nr
Match: KAG6603787.1 (B-cell receptor-associated protein 31, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 389.0 bits (998), Expect = 2.7e-104 Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CmoCh03G005700 vs. NCBI nr
Match: XP_022977723.1 (B-cell receptor-associated protein 31-like [Cucurbita maxima]) HSP 1 Score: 384.0 bits (985), Expect = 8.6e-103 Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of CmoCh03G005700 vs. NCBI nr
Match: XP_023544282.1 (B-cell receptor-associated protein 31-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102 Identity = 219/222 (98.65%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of CmoCh03G005700 vs. TAIR 10
Match: AT1G11905.1 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 230.3 bits (586), Expect = 1.5e-60 Identity = 124/222 (55.86%), Postives = 179/222 (80.63%), Query Frame = 0
BLAST of CmoCh03G005700 vs. TAIR 10
Match: AT5G42570.1 (B-cell receptor-associated 31-like ) HSP 1 Score: 221.1 bits (562), Expect = 9.0e-58 Identity = 125/209 (59.81%), Postives = 161/209 (77.03%), Query Frame = 0
BLAST of CmoCh03G005700 vs. TAIR 10
Match: AT1G11905.2 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 208.0 bits (528), Expect = 7.9e-54 Identity = 117/222 (52.70%), Postives = 174/222 (78.38%), Query Frame = 0
BLAST of CmoCh03G005700 vs. TAIR 10
Match: AT5G48660.1 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-34 Identity = 95/214 (44.39%), Postives = 145/214 (67.76%), Query Frame = 0
BLAST of CmoCh03G005700 vs. TAIR 10
Match: AT3G07190.1 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 136.3 bits (342), Expect = 2.9e-32 Identity = 94/214 (43.93%), Postives = 140/214 (65.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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