CmoCh02G013820 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCCCTCGCACTGCAGACCCCCGCCAAGTCGTAGTCTATCATTCGCCTCCAACAGCGGCTGTTTTCGGAACAACGATTTCTCGTCTTCCCTGAATCCTCATCCAAATTCAAGTGAGTTTCAATCCATTCACCTATTTCTTTAGGATTTAGATACCAGGGATCCTTCTTTGATAAACTGATCTAGGATGGGAGTTGTAATGCTTTAATCATTTATTTTTTTCTGCTTATTCTGCTTCGCGAATGTTGTTGTGCTCGATGTAATCCTAATTCAAATGATTTTCCCCCTTAACTTTTTTTTTTTTTTTCATCTGCCTTGGGATTTTTAAGTTTTTACCTTCGTGTGCGATGTTCGGGGATTTAGATTTATGTGACACTATCGATTGAAATGCGCTATAACTTCCATAATTTACCGTTGAATCATCGATCTCGAAACGGAGAAAAGTTGATGGAATCGATTTTTTTGGTTTTTTCGTGTAGTTCTCATTTTTGTTGCCTATTTTGTGGAAATTAGTACATTTTTCGTTCATCAGTCGGTGGAGATGAGAGATTGCCTTTTCCTTTCAACTAGGGTTAGTCTAACAGAAACTGCTGGGAATTAGTTTTGAATTTCCTGGCTCATTATCGTATATGGGATTTATTAAATTAGTGAAGCAGATGACAATATGTGTAAGAATGGAGATTGATATCATTCTCGCTAGTTATGTATTGATAAGCGACACATATAAAATGTTTCAGTCGGGCTTAGTGTTGATAAAGATACATGAGAAAGTTTAGATATGATTTGAGATCATGTCATAGTTTTTGAATTTTGATATTTTCTGTAATTCATGAATACTTGGAATCAAGCTTTAAAATACAACCAGAAAACTGTAGTAAAAGGGTTGGTTGAACTCATTAAGTAACCCACTACCAACGCCCAAAGCCACCACCGTTTGGACTTTGTAGTGGAATTGGAGCTTGAGTTGAGGCTTACGCCTTTCAAGCCAAGGCCTCAAAGTGCAAGTACAAAGGCTTTTACACTCTACGTTCAGAGGCGTTAGCCTCTTTTTGATGTGTCGTGCTGGAGGTAAGCTCTATTTGGGCCAGAGCATTGATTCCCCATAACGAATAGACTAGCTCGAGATCTCAATTGCCTATCATGTGCTCGAAAAGGTCCCACAGTTCCTACTTAGATTGATTATATTCTTTGTATTGAACATAAAATGAACTTCCATATATGAATATATCATAGGGCGAAGCTGATGTACACCTTAAACGATTTATACCTTGCTTGGAATTGCGAGATGTTCCAAGCGACATTCTGTTATACTTTTAAGTCCCATATTGAGTGATTTTCTCTGTTGTTTGCATCATTTGTTGACTAATTGCTGTTTGAACCTTTGAAAATGAAGAATTGAGCAGTGGGTTCTGATCTATTTGATCCATGGAGTAGTGGGTTCTGATCTAAGCAGTACTTATGGGAACTCCATTGTTTCGCAGGATGTCTGAAGAACCATTTAGGCCACGTGAGAAACTTATTGAAAAGCAAAAATATTTCCAGAGCATCCACAAACACACGTATCTTAAGGGGCCAATGGATAAGGTGACCTCTGTTGCCATTCCACTTGCTTTGGCAGCTTCATCGTTGTATCTTATAGTAAGTTTATTTGTCTCTACACTGCTTGAGGAGATTATTTTTGTTTTCCATTGTGAATAAATTAGTACTGTTTCATGCAGGGACGGGGAATTTATAACATGTCACACGGGATTGGAAAGAAGGAATGATTTCAAAGATCCATCTTAATCTTTATCTAATAATTGCTTAGTTGCAGACTTGGTTACCAATTGGTTTGAATATCAATCTCAGATTCCTTGTTGTGCGTGTGGGATGGTTTGTCTCAGATTATCGTTTTTCCCCCTTTTTAGAAATTGTTTGGTTGAGTTTGCTTTCCAGTTTCCAGTGATCTGATTATTAAGGAGTGAGCAGCATATCCATAATAACTGTTTCTTTGTTCTTTATATAGTAGTTCAAATGTTCGTTAAAGTGATAGGTTCTAGGAAATTTGAATCTATACAAGATTATCCATTGAACGCAGATTTTATAGAGCGGATGAGATATTGAATGAGATATTATGGGTTGGAAAATAAAACACGAA TTCCCCTCGCACTGCAGACCCCCGCCAAGTCGTAGTCTATCATTCGCCTCCAACAGCGGCTGTTTTCGGAACAACGATTTCTCGTCTTCCCTGAATCCTCATCCAAATTCAAGATGTCTGAAGAACCATTTAGGCCACGTGAGAAACTTATTGAAAAGCAAAAATATTTCCAGAGCATCCACAAACACACGTATCTTAAGGGGCCAATGGATAAGGTGACCTCTGTTGCCATTCCACTTGCTTTGGCAGCTTCATCGTTGTATCTTATAGGACGGGGAATTTATAACATGTCACACGGGATTGGAAAGAAGGAATGATTTCAAAGATCCATCTTAATCTTTATCTAATAATTGCTTAGTTGCAGACTTGGTTACCAATTGGTTTGAATATCAATCTCAGATTCCTTGTTGTGCGTGTGGGATGGTTTGTCTCAGATTATCGTTTTTCCCCCTTTTTAGAAATTGTTTGGTTGAGTTTGCTTTCCAGTTTCCAGTGATCTGATTATTAAGGAGTGAGCAGCATATCCATAATAACTGTTTCTTTGTTCTTTATATAGTAGTTCAAATGTTCGTTAAAGTGATAGGTTCTAGGAAATTTGAATCTATACAAGATTATCCATTGAACGCAGATTTTATAGAGCGGATGAGATATTGAATGAGATATTATGGGTTGGAAAATAAAACACGAA ATGTCTGAAGAACCATTTAGGCCACGTGAGAAACTTATTGAAAAGCAAAAATATTTCCAGAGCATCCACAAACACACGTATCTTAAGGGGCCAATGGATAAGGTGACCTCTGTTGCCATTCCACTTGCTTTGGCAGCTTCATCGTTGTATCTTATAGGACGGGGAATTTATAACATGTCACACGGGATTGGAAAGAAGGAATGA MSEEPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPLALAASSLYLIGRGIYNMSHGIGKKE Homology
BLAST of CmoCh02G013820 vs. ExPASy TrEMBL
Match: A0A6J1H2F0 (uncharacterized protein LOC111459482 OS=Cucurbita moschata OX=3662 GN=LOC111459482 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.5e-29 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. ExPASy TrEMBL
Match: A0A6J1K1G6 (uncharacterized protein LOC111491550 OS=Cucurbita maxima OX=3661 GN=LOC111491550 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.9e-29 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. ExPASy TrEMBL
Match: A0A6J1K6C6 (uncharacterized protein LOC111491558 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491558 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.6e-28 Identity = 62/67 (92.54%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. ExPASy TrEMBL
Match: A0A6J1K8A8 (uncharacterized protein LOC111491558 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491558 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.6e-28 Identity = 62/67 (92.54%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. ExPASy TrEMBL
Match: A0A6J1H2N1 (uncharacterized protein LOC111459140 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459140 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.6e-28 Identity = 62/67 (92.54%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. NCBI nr
Match: KAG7035952.1 (hypothetical protein SDJN02_02752, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.7 bits (343), Expect = 7.2e-29 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. NCBI nr
Match: XP_022958178.1 (uncharacterized protein LOC111459482 [Cucurbita moschata]) HSP 1 Score: 136.7 bits (343), Expect = 7.2e-29 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. NCBI nr
Match: XP_022996277.1 (uncharacterized protein LOC111491550 [Cucurbita maxima]) HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. NCBI nr
Match: KAG6606002.1 (hypothetical protein SDJN03_03319, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135.6 bits (340), Expect = 1.6e-28 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. NCBI nr
Match: XP_023532117.1 (uncharacterized protein LOC111794377 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.8 bits (338), Expect = 2.7e-28 Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh02G013820 vs. TAIR 10
Match: AT4G21105.1 (cytochrome-c oxidases;electron carriers ) HSP 1 Score: 115.9 bits (289), Expect = 1.2e-26 Identity = 54/67 (80.60%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CmoCh02G013820 vs. TAIR 10
Match: AT4G21105.2 (cytochrome-c oxidases;electron carriers ) HSP 1 Score: 68.9 bits (167), Expect = 1.7e-12 Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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