CmoCh02G013400 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G013400
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase
LocationCmo_Chr02: 7984894 .. 7987077 (-)
RNA-Seq ExpressionCmoCh02G013400
SyntenyCmoCh02G013400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCATGTTCCTAGTCAAAGGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGTTGGAAGCCTTCACTCCCGAAAGAGAGAATTCATTTGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAACTCTATGGCCTCTCACATGTTCAATGAAGGCAAGCATTAATAGTGTGTGTATTGTTACTCCTGTCACTAATAGTTGCTTGCACTTGTTTTCTTCAGAAGTCGTTTTTGCACTTACGCATTACAATATCCTTCTTCAAGAGAATGAAAAACAAACAATCCTACGTGCTTGTTTATCGAAATCAATTTCAACATTCTTTGATTCCCACCTGTGCTTGCTATTCTATGTGGAGTTTTTTCCTTGGGAAAATGAAAAGTGAAGTTAACAACATGGCTAGCTACCTTATGGCTTATATACTTATAAAGTTTACTTTTAAATGATATAATTCTTGGATATAAGATGAATTATCAGATTGTTATCGAATAAGAAATGTAACCACTAATGTTTTTAGATTCACCATTCTTTTCTCAAAAACTATCAAGAATTGTTTTTCATTTTCAAACCCGTGCATTGAATGCTTTTAATGTTTGTCAGCTATACTTGGAGAGCATATGAATTTGATCTGTTGTTTCATTTCCTCCACTTTTTCCAATGTTAGCTTGAAAGGAAAAATCTTAGACTCCAAGTATTGTGGGGCTTATCCAAAAAATACATTTATAGCCGAGGTCAGACAATAGTATGTAGATAATTCAATTAGCTAGGGTTCCATACATGTGGTTAACAAGAATAAAATGATTCATTGATGCCAAATCAATGTACCTACCTTTCATAATGGTTGAATGATGTGATATTCCTCATAGTATCAGGCTGTTAACTGTTTATTTGTAGAGCTGATTTTTGGTCATTGTTTATCCTAAATTCTTTACTACCTTACCCCCACTTAGATATTTTCCTTTTCATTGCTAAATTCGTCATTATATCATTTAGATGGTTGTATCAATTCTCCATGGCATGGGAAGGATTTTGCCTTTTCTTGTCAAACAAAGTTTTTGTAATTCCTGTAGTGAGAAATATGTTTGTTTAACATAGGTCAAGGGGGTGATGCCACAAGATCATACTTTCAAGGACAGAGACCTAATTCAAAATTGGTTCTTGAGAAAGGAAGTAATAGCGACCCCAGATCTCAATCCCATGGAAAAAACATGGAAAATAGGTTTGGGGATGGTCTGTTGCCACAGAATTTTGACGGTCTTGAGCAGAAATTTATCGATGACATAATCAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGGTATATTTGTATATTCCCGTTTCACTTTCGTTATTATGAGCTGCATTCTTGCTTTTTCTTATCGTCTTTACCAAACATACTTCATTTTGATGCACATCTTCAGAGAATTATGGCAATCAATGCTCAGTATGAGGAACAATTGGCAGCACTTCGAGCTCGGCATGCTGGTCGTCGGGACGAGTTGCTTCAAAGGGAATCAAGTGCACGACAACATCAGTACCAGAAAGGAATAATGGATCATTACATGAATGGGGGCATTGGCCCCGGTGATCCTCGTGGCAATAGTGGAGTTACAAACTTACCTGCGCCTGGACAAGCACATCAAAATTATGAATCTGAACATTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGGAATTCTGGATGGGATCCTAATTTGGACGCTAGAGGGGCATATCCTGGGGGACGAGTTTATGAGACTGGCTCGCGGTACTACTAAACAAAGTTGCATACATAAGATATGCTTGCTGCTTTATTATATCCTCCGTGTGGAATAGGCTCCATAACTAGTGATAGTGCTGTAATTTCACTATAGTTCTGCATTTTTACATTTGTCCGATTAGGCTTCCTTATCTAACATATTAGTTCTGTATTTTTTCCTAAAGTTCTGCATTTTTATGTTGCATGTTTTTTCTCTCTATAAAAGCTCATGATCTATGACATCTCTGGATCTCCATTTTTGTCGACTGGAACAAATCAATATTCAAATTGTAGCTTCCTCGAGCTTTGATTGGAAATAGTAGCTTCCCATGACCTGATTGATGAGCTTTTATTGTGATTATGTTGCCGC

mRNA sequence

ATGCATCATGTTCCTAGTCAAAGGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGTTGGAAGCCTTCACTCCCGAAAGAGAGAATTCATTTGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAACTCTATGGCCTCTCACATGTTCAATGAAGGTCAAGGGGGTGATGCCACAAGATCATACTTTCAAGGACAGAGACCTAATTCAAAATTGGTTCTTGAGAAAGGAAGTAATAGCGACCCCAGATCTCAATCCCATGGAAAAAACATGGAAAATAGGTTTGGGGATGGTCTGTTGCCACAGAATTTTGACGGTCTTGAGCAGAAATTTATCGATGACATAATCAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGAGAATTATGGCAATCAATGCTCAGTATGAGGAACAATTGGCAGCACTTCGAGCTCGGCATGCTGGTCGTCGGGACGAGTTGCTTCAAAGGGAATCAAGTGCACGACAACATCAGTACCAGAAAGGAATAATGGATCATTACATGAATGGGGGCATTGGCCCCGGTGATCCTCGTGGCAATAGTGGAGTTACAAACTTACCTGCGCCTGGACAAGCACATCAAAATTATGAATCTGAACATTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGGAATTCTGGATGGGATCCTAATTTGGACGCTAGAGGGGCATATCCTGGGGGACGAGTTTATGAGACTGGCTCGCGGTACTACTAAACAAAGTTGCATACATAAGATATGCTTGCTGCTTTATTATATCCTCCGTGTGGAATAGGCTCCATAACTAGTGATAGTGCTGTAATTTCACTATAGTTCTGCATTTTTACATTTGTCCGATTAGGCTTCCTTATCTAACATATTAGTTCTGTATTTTTTCCTAAAGTTCTGCATTTTTATGTTGCATGTTTTTTCTCTCTATAAAAGCTCATGATCTATGACATCTCTGGATCTCCATTTTTGTCGACTGGAACAAATCAATATTCAAATTGTAGCTTCCTCGAGCTTTGATTGGAAATAGTAGCTTCCCATGACCTGATTGATGAGCTTTTATTGTGATTATGTTGCCGC

Coding sequence (CDS)

ATGCATCATGTTCCTAGTCAAAGGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGTTGGAAGCCTTCACTCCCGAAAGAGAGAATTCATTTGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAACTCTATGGCCTCTCACATGTTCAATGAAGGTCAAGGGGGTGATGCCACAAGATCATACTTTCAAGGACAGAGACCTAATTCAAAATTGGTTCTTGAGAAAGGAAGTAATAGCGACCCCAGATCTCAATCCCATGGAAAAAACATGGAAAATAGGTTTGGGGATGGTCTGTTGCCACAGAATTTTGACGGTCTTGAGCAGAAATTTATCGATGACATAATCAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGAGAATTATGGCAATCAATGCTCAGTATGAGGAACAATTGGCAGCACTTCGAGCTCGGCATGCTGGTCGTCGGGACGAGTTGCTTCAAAGGGAATCAAGTGCACGACAACATCAGTACCAGAAAGGAATAATGGATCATTACATGAATGGGGGCATTGGCCCCGGTGATCCTCGTGGCAATAGTGGAGTTACAAACTTACCTGCGCCTGGACAAGCACATCAAAATTATGAATCTGAACATTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGGAATTCTGGATGGGATCCTAATTTGGACGCTAGAGGGGCATATCCTGGGGGACGAGTTTATGAGACTGGCTCGCGGTACTACTAA

Protein sequence

MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFNEGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQHQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGWDPNLDARGAYPGGRVYETGSRYY
Homology
[Close]
BLAST of CmoCh02G013400 vs. ExPASy TrEMBL
Match: A0A6J1H5U1 (uncharacterized protein LOC111459838 OS=Cucurbita moschata OX=3662 GN=LOC111459838 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN
Sbjct: 20  MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 79

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
           EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF
Sbjct: 80  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 139

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ
Sbjct: 140 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 199

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW
Sbjct: 200 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 259

Query: 241 DPNLDARGAYPGGRVYETGSRYY 264
           DPNLDARGAYPGGRVYETGSRYY
Sbjct: 260 DPNLDARGAYPGGRVYETGSRYY 282

[Close]
BLAST of CmoCh02G013400 vs. ExPASy TrEMBL
Match: A0A6J1K145 (uncharacterized protein LOC111490759 OS=Cucurbita maxima OX=3661 GN=LOC111490759 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN
Sbjct: 20  MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 79

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
           EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF
Sbjct: 80  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 139

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ
Sbjct: 140 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 199

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW
Sbjct: 200 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 259

Query: 241 DPNLDARGAYPGGRVYETGSRYY 264
           DPNLDARGAYPGGRVY+TGSRYY
Sbjct: 260 DPNLDARGAYPGGRVYDTGSRYY 282

[Close]
BLAST of CmoCh02G013400 vs. ExPASy TrEMBL
Match: A0A6J1DFR7 (uncharacterized protein LOC111020662 OS=Momordica charantia OX=3673 GN=LOC111020662 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 238/263 (90.49%), Postives = 251/263 (95.44%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQ VEQSHPDPFEGRLEAFTPERE+S+VASKNEDQWRW+RDESKM NSMASHMFN
Sbjct: 20  MHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWDRDESKMSNSMASHMFN 79

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
           EGQGGDATRSYFQGQRPN KLV+EKGSNSDPRSQSHGKNME+RFG+GLLPQNFDGLEQKF
Sbjct: 80  EGQGGDATRSYFQGQRPNPKLVIEKGSNSDPRSQSHGKNMESRFGEGLLPQNFDGLEQKF 139

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHR+RI+AINAQYEEQLAALRARHAGRRDELL+RESS RQ
Sbjct: 140 IDDIIKLAKEQNDAEDEENARHRDRIIAINAQYEEQLAALRARHAGRRDELLRRESSVRQ 199

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKG++DHY NGGIGPGDPRGNSGVT L A GQAHQNY+SEHFDSFRERARFLGNS  
Sbjct: 200 HQYQKGMVDHYPNGGIGPGDPRGNSGVTALAAAGQAHQNYDSEHFDSFRERARFLGNSAR 259

Query: 241 DPNLDARGAYPGGRVYETGSRYY 264
           DPNLD RG YPGGRVY+TGSRYY
Sbjct: 260 DPNLDPRGPYPGGRVYDTGSRYY 282

[Close]
BLAST of CmoCh02G013400 vs. ExPASy TrEMBL
Match: A0A5A7V7U3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001140 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.6e-132
Identity = 241/265 (90.94%), Postives = 249/265 (93.96%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQ VEQSHPDPFEGRLEAFTPERE+S+VASKNEDQWRWERDESKMPNSM SHMFN
Sbjct: 53  MHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMTSHMFN 112

Query: 61  E--GQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQ 120
           E  GQGGDATRSYFQGQRPN KL LEKGSNSDPRSQSHGKNME+RFGDG LPQNFDGLEQ
Sbjct: 113 EGQGQGGDATRSYFQGQRPNPKLGLEKGSNSDPRSQSHGKNMESRFGDGPLPQNFDGLEQ 172

Query: 121 KFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSA 180
           KFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHAGRRDELL+RES+A
Sbjct: 173 KFIDDIIKLTKEQNDAEDEENARHRERILAINAQYEEQLAALRVRHAGRRDELLRRESTA 232

Query: 181 RQHQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNS 240
           RQHQYQKGIMDHY NGGIGPGDPRGNSGVTNL A GQAHQNYESEHFDSFRERARFLGNS
Sbjct: 233 RQHQYQKGIMDHYPNGGIGPGDPRGNSGVTNLAASGQAHQNYESEHFDSFRERARFLGNS 292

Query: 241 GWDPNLDARGAYPGGRVYETGSRYY 264
             DPNLD RG+YPGGRVY+T SRYY
Sbjct: 293 ARDPNLDPRGSYPGGRVYDTVSRYY 317

[Close]
BLAST of CmoCh02G013400 vs. ExPASy TrEMBL
Match: A0A5D3BAP0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00380 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.6e-132
Identity = 241/265 (90.94%), Postives = 249/265 (93.96%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQ VEQSHPDPFEGRLEAFTPERE+S+VASKNEDQWRWERDESKMPNSM SHMFN
Sbjct: 40  MHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMTSHMFN 99

Query: 61  E--GQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQ 120
           E  GQGGDATRSYFQGQRPN KL LEKGSNSDPRSQSHGKNME+RFGDG LPQNFDGLEQ
Sbjct: 100 EGQGQGGDATRSYFQGQRPNPKLGLEKGSNSDPRSQSHGKNMESRFGDGPLPQNFDGLEQ 159

Query: 121 KFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSA 180
           KFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHAGRRDELL+RES+A
Sbjct: 160 KFIDDIIKLTKEQNDAEDEENARHRERILAINAQYEEQLAALRVRHAGRRDELLRRESTA 219

Query: 181 RQHQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNS 240
           RQHQYQKGIMDHY NGGIGPGDPRGNSGVTNL A GQAHQNYESEHFDSFRERARFLGNS
Sbjct: 220 RQHQYQKGIMDHYPNGGIGPGDPRGNSGVTNLAASGQAHQNYESEHFDSFRERARFLGNS 279

Query: 241 GWDPNLDARGAYPGGRVYETGSRYY 264
             DPNLD RG+YPGGRVY+T SRYY
Sbjct: 280 ARDPNLDPRGSYPGGRVYDTVSRYY 304

[Close]
BLAST of CmoCh02G013400 vs. NCBI nr
Match: XP_022958684.1 (uncharacterized protein LOC111459838 [Cucurbita moschata] >XP_022958685.1 uncharacterized protein LOC111459838 [Cucurbita moschata])

HSP 1 Score: 532.3 bits (1370), Expect = 2.3e-147
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN
Sbjct: 20  MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 79

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
           EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF
Sbjct: 80  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 139

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ
Sbjct: 140 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 199

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW
Sbjct: 200 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 259

Query: 241 DPNLDARGAYPGGRVYETGSRYY 264
           DPNLDARGAYPGGRVYETGSRYY
Sbjct: 260 DPNLDARGAYPGGRVYETGSRYY 282

[Close]
BLAST of CmoCh02G013400 vs. NCBI nr
Match: KAG6605960.1 (hypothetical protein SDJN03_03277, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.2 bits (1367), Expect = 5.1e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN
Sbjct: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
           EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF
Sbjct: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ
Sbjct: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW
Sbjct: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240

Query: 241 DPNLDARGAYPGGRVYETGSRYY 264
           DPNLDARGAYPGGRVY+TGSRYY
Sbjct: 241 DPNLDARGAYPGGRVYDTGSRYY 263

[Close]
BLAST of CmoCh02G013400 vs. NCBI nr
Match: XP_022995120.1 (uncharacterized protein LOC111490759 [Cucurbita maxima] >XP_022995121.1 uncharacterized protein LOC111490759 [Cucurbita maxima])

HSP 1 Score: 531.2 bits (1367), Expect = 5.1e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN
Sbjct: 20  MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 79

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
           EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF
Sbjct: 80  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 139

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ
Sbjct: 140 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 199

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW
Sbjct: 200 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 259

Query: 241 DPNLDARGAYPGGRVYETGSRYY 264
           DPNLDARGAYPGGRVY+TGSRYY
Sbjct: 260 DPNLDARGAYPGGRVYDTGSRYY 282

[Close]
BLAST of CmoCh02G013400 vs. NCBI nr
Match: XP_023532076.1 (uncharacterized protein LOC111794350 [Cucurbita pepo subsp. pepo] >XP_023532077.1 uncharacterized protein LOC111794350 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 4.4e-146
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN
Sbjct: 20  MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 79

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
           EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF
Sbjct: 80  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 139

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ
Sbjct: 140 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 199

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPA GQAHQNYESEHFDSFRERARFLGNSGW
Sbjct: 200 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAAGQAHQNYESEHFDSFRERARFLGNSGW 259

Query: 241 DPNLDARGAYPGGRVYETGSRYY 264
           DPNLDARGAYPGGRVY+TGSRYY
Sbjct: 260 DPNLDARGAYPGGRVYDTGSRYY 282

[Close]
BLAST of CmoCh02G013400 vs. NCBI nr
Match: KAG7035910.1 (hypothetical protein SDJN02_02710, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 246/260 (94.62%), Postives = 248/260 (95.38%), Query Frame = 0 

Query: 1   MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFN 60
           MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPN MASH+  
Sbjct: 24  MHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNPMASHI-- 83

Query: 61  EGQGGDATRSYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 120
                    SYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF
Sbjct: 84  ---------SYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKF 143

Query: 121 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 180
           IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ
Sbjct: 144 IDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQ 203

Query: 181 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 240
           HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW
Sbjct: 204 HQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAPGQAHQNYESEHFDSFRERARFLGNSGW 263

Query: 241 DPNLDARGAYPGGRVYETGS 261
           DPNLDARGAYPGGRVY+TGS
Sbjct: 264 DPNLDARGAYPGGRVYDTGS 272

[Close]
BLAST of CmoCh02G013400 vs. TAIR 10
Match: AT5G22040.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-52
Identity = 125/269 (46.47%), Postives = 177/269 (65.80%), Query Frame = 0 

Query: 8   RVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFNEGQGG-D 67
           +++  H D F+G+LEAFTPER+  +  S+ E QWRWERD   M   MA+ ++NEGQ G D
Sbjct: 20  QIQDPHSD-FQGQLEAFTPERDQPYSDSQAEGQWRWERDGPNMSRPMATAVYNEGQQGVD 79

Query: 68  ATRSYFQGQRPNSKLVLEKGSNSDPRSQ-SHGKNMENRFGDGLLPQNFDGLEQKFIDDII 127
           ++R+Y++GQ  + K  +EK   SDPR+Q  H +N +  + +    Q F+GLEQKF+DDI 
Sbjct: 80  SSRTYYRGQ-IDPKSGMEK-QGSDPRAQPQHQENPKTGYDNNRGVQTFEGLEQKFMDDIT 139

Query: 128 KLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQHQYQK 187
           +LAK+Q +AED E ARHRE+I  INA+YEEQLA LRARH G+R+E++++ES ARQ Q+++
Sbjct: 140 RLAKDQIEAEDAEIARHREKINTINARYEEQLATLRARHTGKREEIMRKESLARQQQFKQ 199

Query: 188 ---GIMDHYMNGGIG------PGDPRGNSGVTNLPA--PGQAHQNYESEHFDSFRERARF 247
              G+MD Y    +G       G P+G  G    PA       ++Y S+ F+++ ERARF
Sbjct: 200 QTMGMMDQYHPNVVGQANLMPSGHPQGYIGSAQDPAAVADAPPRSYGSDRFEAYGERARF 259

Query: 248 LGNSGWDPNLDARGAYPGGRVYETGSRYY 264
            G +  D   + RG YPGG VY+T SR+Y
Sbjct: 260 QGGNR-DHGFEPRGPYPGGNVYDTSSRFY 284

[Close]
BLAST of CmoCh02G013400 vs. TAIR 10
Match: AT5G22040.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-52
Identity = 125/269 (46.47%), Postives = 177/269 (65.80%), Query Frame = 0 

Query: 8   RVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFNEGQGG-D 67
           +++  H D F+G+LEAFTPER+  +  S+ E QWRWERD   M   MA+ ++NEGQ G D
Sbjct: 20  QIQDPHSD-FQGQLEAFTPERDQPYSDSQAEGQWRWERDGPNMSRPMATAVYNEGQQGVD 79

Query: 68  ATRSYFQGQRPNSKLVLEKGSNSDPRSQ-SHGKNMENRFGDGLLPQNFDGLEQKFIDDII 127
           ++R+Y++GQ  + K  +EK   SDPR+Q  H +N +  + +    Q F+GLEQKF+DDI 
Sbjct: 80  SSRTYYRGQ-IDPKSGMEK-QGSDPRAQPQHQENPKTGYDNNRGVQTFEGLEQKFMDDIT 139

Query: 128 KLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQHQYQK 187
           +LAK+Q +AED E ARHRE+I  INA+YEEQLA LRARH G+R+E++++ES ARQ Q+++
Sbjct: 140 RLAKDQIEAEDAEIARHREKINTINARYEEQLATLRARHTGKREEIMRKESLARQQQFKQ 199

Query: 188 ---GIMDHYMNGGIG------PGDPRGNSGVTNLPA--PGQAHQNYESEHFDSFRERARF 247
              G+MD Y    +G       G P+G  G    PA       ++Y S+ F+++ ERARF
Sbjct: 200 QTMGMMDQYHPNVVGQANLMPSGHPQGYIGSAQDPAAVADAPPRSYGSDRFEAYGERARF 259

Query: 248 LGNSGWDPNLDARGAYPGGRVYETGSRYY 264
            G +  D   + RG YPGG VY+T SR+Y
Sbjct: 260 QGGNR-DHGFEPRGPYPGGNVYDTSSRFY 284

[Close]
BLAST of CmoCh02G013400 vs. TAIR 10
Match: AT5G22040.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-52
Identity = 125/269 (46.47%), Postives = 177/269 (65.80%), Query Frame = 0 

Query: 8   RVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHMFNEGQGG-D 67
           +++  H D F+G+LEAFTPER+  +  S+ E QWRWERD   M   MA+ ++NEGQ G D
Sbjct: 20  QIQDPHSD-FQGQLEAFTPERDQPYSDSQAEGQWRWERDGPNMSRPMATAVYNEGQQGVD 79

Query: 68  ATRSYFQGQRPNSKLVLEKGSNSDPRSQ-SHGKNMENRFGDGLLPQNFDGLEQKFIDDII 127
           ++R+Y++GQ  + K  +EK   SDPR+Q  H +N +  + +    Q F+GLEQKF+DDI 
Sbjct: 80  SSRTYYRGQ-IDPKSGMEK-QGSDPRAQPQHQENPKTGYDNNRGVQTFEGLEQKFMDDIT 139

Query: 128 KLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQHQYQK 187
           +LAK+Q +AED E ARHRE+I  INA+YEEQLA LRARH G+R+E++++ES ARQ Q+++
Sbjct: 140 RLAKDQIEAEDAEIARHREKINTINARYEEQLATLRARHTGKREEIMRKESLARQQQFKQ 199

Query: 188 ---GIMDHYMNGGIG------PGDPRGNSGVTNLPA--PGQAHQNYESEHFDSFRERARF 247
              G+MD Y    +G       G P+G  G    PA       ++Y S+ F+++ ERARF
Sbjct: 200 QTMGMMDQYHPNVVGQANLMPSGHPQGYIGSAQDPAAVADAPPRSYGSDRFEAYGERARF 259

Query: 248 LGNSGWDPNLDARGAYPGGRVYETGSRYY 264
            G +  D   + RG YPGG VY+T SR+Y
Sbjct: 260 QGGNR-DHGFEPRGPYPGGNVYDTSSRFY 284

[Close]
BLAST of CmoCh02G013400 vs. TAIR 10
Match: AT3G62330.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.1e-05
Identity = 44/188 (23.40%), Postives = 84/188 (44.68%), Query Frame = 0 

Query: 28  RENSFVASKNEDQWRWERDESKMPNSMASHMFNEGQGGDATRSYFQG------------- 87
           R++ FV ++  ++ R   ++  +P        ++     +T S   G             
Sbjct: 232 RQDKFVDNRFREETRVRENQRNVPRGSPQAYGSDRARSRSTHSKSPGRPRYSGWDKPYDR 291

Query: 88  QRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKFIDDIIKLAKEQNDA 147
           Q+P       +  + +    S    + ++F     PQ  + LE ++  D ++L K+++  
Sbjct: 292 QKPEVSGYRSERWDQERMGGSSDIQVSHQFERPPFPQTLEELELEYTRDALELEKKRDKE 351

Query: 148 EDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQHQYQKGIMDHYMNG 203
           EDEEN +HRE I  +   Y ++LA LR  +A + D+ LQ ++  RQ Q ++       N 
Sbjct: 352 EDEENNKHRETIRELRESYMKKLAGLRGMNAKQWDDFLQLDAQRRQQQARQ------QNS 411

The following BLAST results are available for this feature:
BLAST of CmoCh02G013400 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G013400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H5U11.1e-147100.00uncharacterized protein LOC111459838 OS=Cucurbita moschata OX=3662 GN=LOC1114598... [more]
A0A6J1K1452.5e-14799.62uncharacterized protein LOC111490759 OS=Cucurbita maxima OX=3661 GN=LOC111490759... [more]
A0A6J1DFR71.3e-13290.49uncharacterized protein LOC111020662 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A5A7V7U36.6e-13290.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BAP06.6e-13290.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CmoCh02G013400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958684.12.3e-147100.00uncharacterized protein LOC111459838 [Cucurbita moschata] >XP_022958685.1 unchar... [more]
KAG6605960.15.1e-14799.62hypothetical protein SDJN03_03277, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022995120.15.1e-14799.62uncharacterized protein LOC111490759 [Cucurbita maxima] >XP_022995121.1 uncharac... [more]
XP_023532076.14.4e-14699.24uncharacterized protein LOC111794350 [Cucurbita pepo subsp. pepo] >XP_023532077.... [more]
KAG7035910.11.3e-13494.62hypothetical protein SDJN02_02710, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh02G013400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22040.12.3e-5246.47unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT5G22040.22.3e-5246.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G22040.32.3e-5246.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G62330.16.1e-0523.40Zinc knuckle (CCHC-type) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR34210OS01G0252900 PROTEINcoord: 1..263
NoneNo IPR availablePANTHERPTHR34210:SF1SUBFAMILY NOT NAMEDcoord: 1..263

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G013400.1CmoCh02G013400.1mRNA