CmoCh02G008820 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G008820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr02: 5461802 .. 5464490 (-)
RNA-Seq Expression	CmoCh02G008820
Synteny	CmoCh02G008820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCCCCTGTTTCCGCATATCTGGATTTGCAGAAAGATCGGCCTTAATTCAACTCTACTCTCTCGATTCTTTGCAATTAATGGATCCTAAACTCTCCCGGATTCCAGGTATTGATCCGTTTTGTTTTTTGTTATCTCATTCATTTCTGCTTGATTTCGTTACTGATTTCTCTCAAATTTGCTTCAAATCGTCAGTGAAACCTGTTTCTTCTAAACCGAAATTCATCCGAAAGCCAGCCTGTGAAGGGCCCCAAATCACCCCCCTTCAACCTCCGATTTCCAGGTACTACACTTTATTATTATTGTCAATTTCGTTCCGAATTTCCTTGTTGAATCATGTTCTTCTGTAGTAGAGTATGAATCTTATTGTTACCATTAGGCAGAAACGAGTTTTCGGAATTGTTCGGAGCTCAAACATTCCAATCAAATCAGTAAATGAAAATCCCTTAGCTAAGCCCTTAATTGGAGCTGTTAAGAAACAACCAAAATCCACTCGATTAACTCAAATCGCGGTCAATGCTACTACTGATCAGAAGATCAGTGAAAAGTTGAATCCGAGGCCGAAGAAGAAGAGCCTTAGCACCAAACAGCAAGTTATGGAAACGGCCATAAAGGATCTGCGTGTTACGAACGACGTTGTGGAGCCTCAGACGCCGGTGGCTAGGCCTCGTTTGCATAAGATGAGAAACGCTGGCACCCCTTATCATACTGCGGAAAAATGCAGTAATTGTCGTTTTGACAAGATGGAGACTTCGTCATATTGGGTTGCTCAGATCAAATTGGCTGAATCCGTCGGGAAGCATTTTGTGTCAGCTGATTTCTTTCGCCTTGCTTATGTCTGCAATGCCGAGGTAGTGTAAATGACATATTCGAACATCTTTATCTTTACCTCTGATCATATCTAGAAGGGCTTATAGCATTAGTAAAGCTGGAAAACGTACTTTGATTTTGACCATTTTTGCAAAAGGCTGTTAATGGCATGTCTTTAGAGAGATTCTTTCTATATGCCCATATGGGTTTGGTAATGCATTTATCTCATATTGTGAGATCCGATCAGTTAGATTCCATATTAGTTGGTCTCGATCCCATATTAGTTGGAGAGAGGAACGAATAGCAGTAAAAACGTTGAACTTTGAAGGAATGGATTATGAGATCCACATCGATTGGGATGAAAACGAAATATACTTCACAAGGGTATGAAAACCTCTTTTTAACGGCCGTGTTTTAAAATTTTTGAGTGAAAACTCGAAAGAAAAAGTCCAAAAAAAACAATATCAATCCGTAGTAGTATAATCCTCCAATAAGGAGTTTTATTAAAGAGGATCTTATCTTGTGAAACGTCTAACTGGATAAGTATCTTCTTTTTTCTAATTTCATGTTCATCACCTTTCCACTCTTGAATTTGTTGCCACTGTGCCATCTATTCTTAAAATACGACTAATTGTTGGCCATAAGAACAAGAGTCTTCCTGAATTTTTCTCCTTGATGTTTTGGGTCTGCTCAGAACTCAGTTTTTACCTTCCCATTTATATTGATATCTGGTCTATTGCAACAGCCGATCAAGAACCTCAAGGTCGAGCTAAAGCGTTACTTGACTCGGCATGAACATCTATCTATGAACACTGAGTGGAAGGATGTGAGTCTTAGCTACGGCTTACTTCAAGATGAAAACATTAGTGGCCCCCACGATCCGTCCACTAAAATTTGTGACAGTGAACTCAACGAAGGTAATCAGACTACGGCAATCGAATCTAGGACCCCAGAATTCAGTAGCAGTGAATTCGATAAAGATGAGATTGTGGGAACTGATGTTGGTGAGCTGGGAACCGAGACATGCCAAAGATGTCCAAGTTCTTTGCCTATGGAACCAGAACAGACCCATCAAACATGACACCGGAATTTGATTTTGAAGCCTTAGTTCAGCTTGTGTTCTATAAATGCATCCAATTTTGTGCTTTCCATTGCCATTTTCACATTCTATTTTGTATACTAGGCAAATGATTTAAGGATTGTTTGATGTTCATCAAATCATATACTATACGGATTTGTGTCCACTTGTCACTAGGAGTGTAAAGTGATTGGATGGGGTTGGTTTGAGGTCGAGCCAATGAAATCGGTGCTCGAAAGACGACATTCAAAAGTACATACAAAATCACTCATAAATTTTATGGTTTAAGGTGATCTAAGACTCTAGTACTGACTCGAGAGTTAGAGTGTAGGTAGCTTAACACTACACTCGTGTTCACCTTTTTTTTCTTTTTCAATAATGCAGAACCAAATTGAAACTACCCGACATGGATTGATTTGGTTGGATCGAATGGTGTCGAGTTTTGTTTGGCTCCTAAGCTGTTACATGGTAGGTAGTAAGAATCAAAGATTAGGCTAAGTTTGCTTGAACAGAGTCAAGTGAGTCCATCAATCAGCCTCGGGCGCTCACTAAGAAAGCAAAGTTGGACCCATTATAGGAAAATAGAAAGGACATCACATAATTGTCCTTTATAATCGGTCCCCTCCCCATTTTGCAAGGCTTATGCGCATACAAAACACCCCTATTTAATTTGATTGATCCAAACACACTGTCAACACCTTGTCCCCTACCCGCCACACCACCACCTCATTTGTTGTCGCAGTCGGCCCACTCTTAACAGTGTTAGAACCAAAATGAACATTAACGAAAACTACATATAA

mRNA sequence

TCTCTCCCCTGTTTCCGCATATCTGGATTTGCAGAAAGATCGGCCTTAATTCAACTCTACTCTCTCGATTCTTTGCAATTAATGGATCCTAAACTCTCCCGGATTCCAGTGAAACCTGTTTCTTCTAAACCGAAATTCATCCGAAAGCCAGCCTGTGAAGGGCCCCAAATCACCCCCCTTCAACCTCCGATTTCCAGGCAGAAACGAGTTTTCGGAATTGTTCGGAGCTCAAACATTCCAATCAAATCAGTAAATGAAAATCCCTTAGCTAAGCCCTTAATTGGAGCTGTTAAGAAACAACCAAAATCCACTCGATTAACTCAAATCGCGGTCAATGCTACTACTGATCAGAAGATCAGTGAAAAGTTGAATCCGAGGCCGAAGAAGAAGAGCCTTAGCACCAAACAGCAAGTTATGGAAACGGCCATAAAGGATCTGCGTGTTACGAACGACGTTGTGGAGCCTCAGACGCCGGTGGCTAGGCCTCGTTTGCATAAGATGAGAAACGCTGGCACCCCTTATCATACTGCGGAAAAATGCAGTAATTGTCGTTTTGACAAGATGGAGACTTCGTCATATTGGGTTGCTCAGATCAAATTGGCTGAATCCGTCGGGAAGCATTTTGTGTCAGCTGATTTCTTTCGCCTTGCTTATGTCTGCAATGCCGAGCCGATCAAGAACCTCAAGGTCGAGCTAAAGCGTTACTTGACTCGGCATGAACATCTATCTATGAACACTGAGTGGAAGGATGTGAGTCTTAGCTACGGCTTACTTCAAGATGAAAACATTAGTGGCCCCCACGATCCGTCCACTAAAATTTGTGACAGTGAACTCAACGAAGGTAATCAGACTACGGCAATCGAATCTAGGACCCCAGAATTCAGTAGCAGTGAATTCGATAAAGATGAGATTGTGGGAACTGATGTTGAGTCAAGTGAGTCCATCAATCAGCCTCGGGCGCTCACTAAGAAAGCAAATCGGCCCACTCTTAACAGTGTTAGAACCAAAATGAACATTAACGAAAACTACATATAA

Coding sequence (CDS)

ATGGATCCTAAACTCTCCCGGATTCCAGTGAAACCTGTTTCTTCTAAACCGAAATTCATCCGAAAGCCAGCCTGTGAAGGGCCCCAAATCACCCCCCTTCAACCTCCGATTTCCAGGCAGAAACGAGTTTTCGGAATTGTTCGGAGCTCAAACATTCCAATCAAATCAGTAAATGAAAATCCCTTAGCTAAGCCCTTAATTGGAGCTGTTAAGAAACAACCAAAATCCACTCGATTAACTCAAATCGCGGTCAATGCTACTACTGATCAGAAGATCAGTGAAAAGTTGAATCCGAGGCCGAAGAAGAAGAGCCTTAGCACCAAACAGCAAGTTATGGAAACGGCCATAAAGGATCTGCGTGTTACGAACGACGTTGTGGAGCCTCAGACGCCGGTGGCTAGGCCTCGTTTGCATAAGATGAGAAACGCTGGCACCCCTTATCATACTGCGGAAAAATGCAGTAATTGTCGTTTTGACAAGATGGAGACTTCGTCATATTGGGTTGCTCAGATCAAATTGGCTGAATCCGTCGGGAAGCATTTTGTGTCAGCTGATTTCTTTCGCCTTGCTTATGTCTGCAATGCCGAGCCGATCAAGAACCTCAAGGTCGAGCTAAAGCGTTACTTGACTCGGCATGAACATCTATCTATGAACACTGAGTGGAAGGATGTGAGTCTTAGCTACGGCTTACTTCAAGATGAAAACATTAGTGGCCCCCACGATCCGTCCACTAAAATTTGTGACAGTGAACTCAACGAAGGTAATCAGACTACGGCAATCGAATCTAGGACCCCAGAATTCAGTAGCAGTGAATTCGATAAAGATGAGATTGTGGGAACTGATGTTGAGTCAAGTGAGTCCATCAATCAGCCTCGGGCGCTCACTAAGAAAGCAAATCGGCCCACTCTTAACAGTGTTAGAACCAAAATGAACATTAACGAAAACTACATATAA

Protein sequence

MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNENPLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLRVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPHDPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDVESSESINQPRALTKKANRPTLNSVRTKMNINENYI

Homology

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BLAST of CmoCh02G008820 vs. ExPASy TrEMBL
Match: A0A6J1H140 (uncharacterized protein LOC111459426 OS=Cucurbita moschata OX=3662 GN=LOC111459426 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 6.7e-155
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN
Sbjct: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR 120
           PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR
Sbjct: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR 120

Query: 121 VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180
           VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH
Sbjct: 121 VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180

Query: 181 FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH 240
           FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH
Sbjct: 181 FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH 240

Query: 241 DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV
Sbjct: 241 DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 282

[Close]

BLAST of CmoCh02G008820 vs. ExPASy TrEMBL
Match: A0A6J1K637 (uncharacterized protein LOC111491034 OS=Cucurbita maxima OX=3661 GN=LOC111491034 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.7e-143
Identity = 264/283 (93.29%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKLSRIPVKPVSSKPKFIRKPACE PQIT LQPPISRQKRVFGIVRSSNIPIKSVNEN
Sbjct: 1   MDPKLSRIPVKPVSSKPKFIRKPACEAPQITALQPPISRQKRVFGIVRSSNIPIKSVNEN 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQ-KISEKLNPRPKKKSLSTKQQVMETAIKDL 120
           PLAKPLIGAVKKQPKSTRLTQIAVNATTDQ KI+EKLNP+PKKKS STKQQ M  AIKDL
Sbjct: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKKITEKLNPKPKKKSPSTKQQFMGMAIKDL 120

Query: 121 RVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           RV NDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK
Sbjct: 121 RVMNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180

Query: 181 HFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP 240
           HFVSADFFRLAYVC+AEP +NLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP
Sbjct: 181 HFVSADFFRLAYVCSAEPFRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP 240

Query: 241 HDPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           H+PSTKICDSEL++ NQ TAIESRTPEFS SEFDKDEIVGTDV
Sbjct: 241 HNPSTKICDSELDQDNQATAIESRTPEFSGSEFDKDEIVGTDV 283

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BLAST of CmoCh02G008820 vs. ExPASy TrEMBL
Match: A0A6J1J9A3 (uncharacterized protein LOC111483750 OS=Cucurbita maxima OX=3661 GN=LOC111483750 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123
Identity = 227/282 (80.50%), Postives = 249/282 (88.30%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKL++IP K +SSKPKFIRKP+ E P+IT  QPPISRQKRVFG VRSSNIPIK VNEN
Sbjct: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEN 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR 120
           PL KPLIGA+KKQPKSTRL QIAVN T DQKI+EKLNPRPKKKS S KQQV ETA+KDLR
Sbjct: 61  PLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDLR 120

Query: 121 VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180
           V NDVVEP TPV RPRL K +NAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GKH
Sbjct: 121 VQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGKH 180

Query: 181 FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH 240
           FVSADFFRLAY+CNAEPI+NL+VELKRYLTRHEHLSMNTEWKDVS SYGL+QD++  GP 
Sbjct: 181 FVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNGGPK 240

Query: 241 DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           +PST+IC SE+N+ +Q  A+ES TPE SSS+ DKDEIVG DV
Sbjct: 241 NPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADV 282

[Close]

BLAST of CmoCh02G008820 vs. ExPASy TrEMBL
Match: A0A6J1FXU3 (uncharacterized protein LOC111448733 OS=Cucurbita moschata OX=3662 GN=LOC111448733 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.3e-123
Identity = 228/282 (80.85%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKL++IP K +SSKPKFIRKP+ E P+IT  QPPISRQKRVFG VRSSNIPIK VNE 
Sbjct: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEK 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR 120
           PLAKPLIGA+KKQPKSTRL QIAVN T DQKI+EKLNPRPKKKS S KQQV ET +KDLR
Sbjct: 61  PLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETGLKDLR 120

Query: 121 VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180
           V NDVVEP TPV RPR  K +NAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GKH
Sbjct: 121 VQNDVVEPHTPVMRPRFLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGKH 180

Query: 181 FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH 240
           FVSADFFRLAYVCNAEPI+NLKVELKRYLTRHEHLSMNTEWKDVSLSYGL+QD++  GP 
Sbjct: 181 FVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLIQDDDNGGPK 240

Query: 241 DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           +PST+IC SE+N+ +Q  A+ES TPE SSS+ DKDEIVG DV
Sbjct: 241 NPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADV 282

[Close]

BLAST of CmoCh02G008820 vs. ExPASy TrEMBL
Match: A0A6J1CFV0 (uncharacterized protein LOC111011051 OS=Momordica charantia OX=3673 GN=LOC111011051 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 8.5e-110
Identity = 216/284 (76.06%), Postives = 237/284 (83.45%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPK ++ PVK ++SKPKF RKP  E PQI   QP ISRQKRVFG VRSSNIPIK+VNE 
Sbjct: 1   MDPKATQFPVKSLASKPKFTRKPVSEAPQIPVHQPTISRQKRVFGTVRSSNIPIKTVNEK 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR 120
           PLAKP  GAVKKQ KSTRLTQIAVN T DQKI+EKLNPR KKKS   KQ    TA+KDLR
Sbjct: 61  PLAKPSNGAVKKQLKSTRLTQIAVNVTADQKINEKLNPRQKKKSPGIKQPASGTALKDLR 120

Query: 121 VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180
           V NDVVEPQTPVA PRL K++N GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAE+VGKH
Sbjct: 121 VENDVVEPQTPVAVPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAEAVGKH 180

Query: 181 FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLL--QDENISG 240
           FVSADFFRLAYVCNAEPI+NLKVELKRYLTRHEHLS +TEWKDVSLSYGLL  QD+N  G
Sbjct: 181 FVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSAHTEWKDVSLSYGLLQVQDDNNGG 240

Query: 241 PHDPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
             +PS +I  +ELN+ +Q  A ES TPE SSS+ D+D+IVGTDV
Sbjct: 241 RQNPSIEISGNELNK-DQIPATESGTPEMSSSDVDQDDIVGTDV 283

[Close]

BLAST of CmoCh02G008820 vs. NCBI nr
Match: XP_022958101.1 (uncharacterized protein LOC111459426 [Cucurbita moschata])

HSP 1 Score: 556.6 bits (1433), Expect = 1.4e-154
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN
Sbjct: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR 120
           PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR
Sbjct: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKKSLSTKQQVMETAIKDLR 120

Query: 121 VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180
           VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH
Sbjct: 121 VTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180

Query: 181 FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH 240
           FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH
Sbjct: 181 FVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGPH 240

Query: 241 DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV
Sbjct: 241 DPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 282

[Close]

BLAST of CmoCh02G008820 vs. NCBI nr
Match: KAG6605538.1 (hypothetical protein SDJN03_02855, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.1 bits (1359), Expect = 5.3e-146
Identity = 270/283 (95.41%), Postives = 273/283 (96.47%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKLSRIPVKPVSSKPKFIRKPACE PQIT LQPPISRQKRVFGIVRSSNIPIKSVNEN
Sbjct: 75  MDPKLSRIPVKPVSSKPKFIRKPACEAPQITALQPPISRQKRVFGIVRSSNIPIKSVNEN 134

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQ-KISEKLNPRPKKKSLSTKQQVMETAIKDL 120
           P  KPLIGAVKKQPKSTRLTQIAVNATTDQ KI+EKLNPRPKKKS STKQ VMETAIKDL
Sbjct: 135 PFVKPLIGAVKKQPKSTRLTQIAVNATTDQKKITEKLNPRPKKKSPSTKQPVMETAIKDL 194

Query: 121 RVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           RVTNDVVEPQTPVARPRLHKMRN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK
Sbjct: 195 RVTNDVVEPQTPVARPRLHKMRNTGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 254

Query: 181 HFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP 240
           HFVSADFFRLAYVCNAEPI+NL VELKRYLTRHEHL MNTEWKDVSLSYGLLQDENISGP
Sbjct: 255 HFVSADFFRLAYVCNAEPIRNLTVELKRYLTRHEHLYMNTEWKDVSLSYGLLQDENISGP 314

Query: 241 HDPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           H+PSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV
Sbjct: 315 HNPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 357

[Close]

BLAST of CmoCh02G008820 vs. NCBI nr
Match: KAG7013905.1 (hypothetical protein SDJN02_24074, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.1 bits (1359), Expect = 5.3e-146
Identity = 270/283 (95.41%), Postives = 273/283 (96.47%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKLSRIPVKPVSSKPKFIRKPACE PQIT LQPPISRQKRVFGIVRSSNIPIKSVNEN
Sbjct: 1   MDPKLSRIPVKPVSSKPKFIRKPACEAPQITALQPPISRQKRVFGIVRSSNIPIKSVNEN 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQ-KISEKLNPRPKKKSLSTKQQVMETAIKDL 120
           P  KPLIGAVKKQPKSTRLTQIAVNATTDQ KI+EKLNPRPKKKS STKQ VMETAIKDL
Sbjct: 61  PFVKPLIGAVKKQPKSTRLTQIAVNATTDQKKITEKLNPRPKKKSPSTKQPVMETAIKDL 120

Query: 121 RVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           RVTNDVVEPQTPVARPRLHKMRN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK
Sbjct: 121 RVTNDVVEPQTPVARPRLHKMRNTGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180

Query: 181 HFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP 240
           HFVSADFFRLAYVCNAEPI+NL VELKRYLTRHEHL MNTEWKDVSLSYGLLQDENISGP
Sbjct: 181 HFVSADFFRLAYVCNAEPIRNLTVELKRYLTRHEHLYMNTEWKDVSLSYGLLQDENISGP 240

Query: 241 HDPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           H+PSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV
Sbjct: 241 HNPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283

[Close]

BLAST of CmoCh02G008820 vs. NCBI nr
Match: XP_023534467.1 (uncharacterized protein LOC111796018 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.3 bits (1357), Expect = 9.0e-146
Identity = 271/288 (94.10%), Postives = 276/288 (95.83%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKLSRIPVKPVSSKPKFIRKPACE PQIT LQPPISRQKRVFGIVRSSNIPIKSVNEN
Sbjct: 1   MDPKLSRIPVKPVSSKPKFIRKPACEAPQITALQPPISRQKRVFGIVRSSNIPIKSVNEN 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQ-KISEKLNPRPKKKSLSTKQQVMETAIKDL 120
           PLAKPLIGAVKKQPKSTRLTQIAVNAT DQ KI+EKLNPRPKKKS STKQQ METAIKDL
Sbjct: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATADQKKITEKLNPRPKKKSPSTKQQFMETAIKDL 120

Query: 121 RVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           RV NDVVEPQTPVARPRLHKMRNAGTPY TAEKCSNCRFDKMETSSYWVAQIKLAESVGK
Sbjct: 121 RVMNDVVEPQTPVARPRLHKMRNAGTPYQTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180

Query: 181 HFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP 240
           HFVSADFFRLAY+CNAEPI+NLKVELKRYLTRHEHLSM TEWKDVSLSYGLLQDENISGP
Sbjct: 181 HFVSADFFRLAYICNAEPIRNLKVELKRYLTRHEHLSMKTEWKDVSLSYGLLQDENISGP 240

Query: 241 HDPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDVESSES 288
           H+PSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV   E+
Sbjct: 241 HNPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDVGELET 288

[Close]

BLAST of CmoCh02G008820 vs. NCBI nr
Match: XP_022995529.1 (uncharacterized protein LOC111491034 [Cucurbita maxima])

HSP 1 Score: 516.5 bits (1329), Expect = 1.6e-142
Identity = 264/283 (93.29%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MDPKLSRIPVKPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNEN 60
           MDPKLSRIPVKPVSSKPKFIRKPACE PQIT LQPPISRQKRVFGIVRSSNIPIKSVNEN
Sbjct: 1   MDPKLSRIPVKPVSSKPKFIRKPACEAPQITALQPPISRQKRVFGIVRSSNIPIKSVNEN 60

Query: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQ-KISEKLNPRPKKKSLSTKQQVMETAIKDL 120
           PLAKPLIGAVKKQPKSTRLTQIAVNATTDQ KI+EKLNP+PKKKS STKQQ M  AIKDL
Sbjct: 61  PLAKPLIGAVKKQPKSTRLTQIAVNATTDQKKITEKLNPKPKKKSPSTKQQFMGMAIKDL 120

Query: 121 RVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           RV NDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK
Sbjct: 121 RVMNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180

Query: 181 HFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP 240
           HFVSADFFRLAYVC+AEP +NLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP
Sbjct: 181 HFVSADFFRLAYVCSAEPFRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENISGP 240

Query: 241 HDPSTKICDSELNEGNQTTAIESRTPEFSSSEFDKDEIVGTDV 283
           H+PSTKICDSEL++ NQ TAIESRTPEFS SEFDKDEIVGTDV
Sbjct: 241 HNPSTKICDSELDQDNQATAIESRTPEFSGSEFDKDEIVGTDV 283

[Close]

BLAST of CmoCh02G008820 vs. TAIR 10
Match: AT5G62550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 7.6e-10
Identity = 59/241 (24.48%), Postives = 105/241 (43.57%), Query Frame = 0


Query: 53  PIKSVNENPLAKPLIG--AVKKQPKSTRLTQIAVNATTDQKIS-------EKLNPR---- 112
           P++S   +   KP +   +    P+  R+      +TT   +S        KL PR    
Sbjct: 25  PLRSALRSKEGKPPVPDFSASSMPRRARVVSAVSQSTTVLDLSGKKSVDRTKLPPRRLSI 84

Query: 113 PKKKSLSTKQQVMETAIKDLRVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFD 172
           P K + ++  + + +++  L      V+P+     PR           +     +  + +
Sbjct: 85  PNKPTSNSSVKSVSSSVTSL----SEVKPKRSRIVPRSFNETTTPVSSNLRSSVTRKKVE 144

Query: 173 KMETSSYWVAQIKLAESVGKHFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNT 232
            + +S+YW+  IKLAESV KH +S  FF+LA     EP+  +K ELK Y  R+    +  
Sbjct: 145 DLSSSTYWLTHIKLAESVAKHSISLGFFKLALHAGCEPLDKMKEELKLYARRNNMDGLAD 204

Query: 233 EWKDVSLSYGLLQDENISGPHDPSTKICDSELNEGNQTTAIES--RTPEFS--SSEFDKD 277
             K++S  Y + ++ N     + S+ + +      N    ++S   TP  S  +SE  KD
Sbjct: 205 AMKELSELYNISEESNQVQVSETSSVVAEETAMSLNNDNDVQSSFSTPGNSNITSEITKD 261

The following BLAST results are available for this feature:

BLAST of CmoCh02G008820 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G008820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H140	6.7e-155	100.00	uncharacterized protein LOC111459426 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]
A0A6J1K637	7.7e-143	93.29	uncharacterized protein LOC111491034 OS=Cucurbita maxima OX=3661 GN=LOC111491034...	[more]
A0A6J1J9A3	1.4e-123	80.50	uncharacterized protein LOC111483750 OS=Cucurbita maxima OX=3661 GN=LOC111483750...	[more]
A0A6J1FXU3	2.3e-123	80.85	uncharacterized protein LOC111448733 OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]
A0A6J1CFV0	8.5e-110	76.06	uncharacterized protein LOC111011051 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]

BLAST of CmoCh02G008820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958101.1	1.4e-154	100.00	uncharacterized protein LOC111459426 [Cucurbita moschata]	[more]
KAG6605538.1	5.3e-146	95.41	hypothetical protein SDJN03_02855, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7013905.1	5.3e-146	95.41	hypothetical protein SDJN02_24074, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023534467.1	9.0e-146	94.10	uncharacterized protein LOC111796018 [Cucurbita pepo subsp. pepo]	[more]
XP_022995529.1	1.6e-142	93.29	uncharacterized protein LOC111491034 [Cucurbita maxima]	[more]

BLAST of CmoCh02G008820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62550.1	7.6e-10	24.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..218
None	No IPR available	PANTHER	PTHR34468	MICROTUBULE-ASSOCIATED FUTSCH-LIKE PROTEIN	coord: 1..284
None	No IPR available	PANTHER	PTHR34468:SF3	MEDIATOR OF DNA DAMAGE CHECKPOINT PROTEIN 1-LIKE	coord: 1..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G008820.1	CmoCh02G008820.1	mRNA