CmoCh02G008440 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G008440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NOT2 / NOT3 / NOT5 family
Location	Cmo_Chr02: 5127592 .. 5140178 (-)
RNA-Seq Expression	CmoCh02G008440
Synteny	CmoCh02G008440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGTTTACTTAATGTACTGTCCGCAATCTACATTTTTCTTTAAGATTGCATTGGAACATGTGTATTGGGTTGAGTTACATATTATTTCTTGAAGTTTATTACAGATACTGTCATGCGTTACAGATTCTGTGCAGTGGCATTGACCTTTCAGAAACTAAGAAATCCTAACCCTAGTTGTTGTTGTTTTTAAGTTCATAGTCTAGTTAGGATTTCAGTTTTAATTGGCTCAACATTTTTTTGTTAGGTAAGAACGTATCTCTTTCAATTATAGAAATTCCATTCAATTGTTTCCATTGTTCTCATTTGGTTTTTGGTTGTTCTAGGTTAATTGAATCTTATTTTTATAACAATCTGCTAAATGAGCACGTGCCTTTATTGTGTTAACTTATTTTGACATAGTCATGTGCATTTTTGTTGATGTTGGTGCTGTTTCACGTGCCTTCATTCTTTATGATAAATAATTTATCTTCTTCTTCCTTTTATGTTGATACATTGAAATTCTACTGTTAACTTTTGTGATTCAAGTTCAAATTTGCACAATGATACATGATTTTTAAATTTTCAAAGCTCTTGTTATTCGCAGTCATCTGTTAATGGATCAGCTTCAAATCTTCCAGATGGTACTGGGCGATCTTTTGCTAACTCATTTTCTGGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCCGGTAGGTGCATGTGTCTTAGAGTTGTGTAGTTTTCACTCAAATTTATGAAATTGAGAGGTCTCAATTTCAGGAACTATCCAAGGGTTGCACAACATTCACGGAAACTTCAATCTTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGAACAATTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGGTATCTTTCAAAGTCAGGCTATTTATTCGTAATTACCATCAGTTTCACCTGTAGTTTCTTTGAGTTGCATTTATTGTGCTCACAAAAGATTAGCGGCTGCATGATAACATATTTTAGACATTTTATCACTCTGGTAAGCAAAGACGAGCATGCTTATTTATGATTAATTCTGAAGTACTGTTGTAATTATCACTATAGAAGAGATTTACCATCTAGTAACTGTGTTGAGGAAGAAATGATGGAGAGCTGCTTTACAAATCAGACATCAGATCATGATTTTTATAATTAGCATGGTATAGGGTTTTCTGGGCATGAAATGACATCTTTAATAGATCTAGAAGCAATGAAAGTGAAACCCTAATCTTATCCTCTCAAAACCCCTCATAATTGTTTATGTGCTTTCACTACATTTTGACTGTTGCGTTCTCTTCTGTAGTTATCTCATGGCAGCTCTCACGGACATTCAGGAGTCACAAATAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAGTAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTCTGTCTACTTCTGCTGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGTGTATCCCCAATTTTGGGAAATGCAGGTCCTCGGATCACAAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTACTGGCGGGGGTTTGTCATTACCTGGTCTTGCTTCTCGTCTAAACCTTGGTGCGAATAGTGGATCTGGAAGCTTAACTGTGCAGGGACAAAACCGTTTAATGAGTGGTGTGCTTCCACAAGGTACAATCCCAATTCCTTGAATTTGTGCGCAAAATACCTATTTTATGAGGCTATATTGAATGGAAATGCATTCATTACTATGTTTTAGTTAAAAATGTTCTATGCTACTTTTTCGTATATGACATTTTCTTGCTTCAGGATCTCAACAGGTTATTTCTATGTTAAGTAATTCTTATCCAAGTGCTGGAGGTCCACTTTCCCAAAACCACATACAGAATGTGAATAGTCTGAATTCTCTAGGGATGTTGAATGATGTGAACTCCAGTGACAATTCCCCTTTTGACATTAATGATTTTCCTCAGTTGACAAGTCGTCCAAGTTCTGCAGGAGGGCCTCAAGGACAATTGAGTTAGTAACTAGACATTGTTGGTTTTGTTTGTTTTTTTTTTCTTTTTCTCTCTTCGCCAATTTTGATTGTTAGAAATGTCATGTAATTGTTTCAGGTTCCCTGAGAAAGCAGGGCCTTAGTCCTATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAGTGAAGACTTCCCAGCATTATCTAGATTTAAAGGTGCAAATCCCTTCTTTGCTTCTACTAGGTTTCATTCATGTAAATCATAAGCCAAAACTTTGTTTACTGCTCTCTACCCTATTCTTTTTAAGATTAAATACAACAATTTTGGATAACTGTTGTTGGGAATTATCTCAGTTGACCATGAGCAATAGCTTAATAGATTTAGTAGAATTTCAGATTTCGTTTTTCAAGTTTTCCCTTGCAATTATTAAGCTCAAGATCATCTTCATGGAGAGTTCTATTTTTCTGTCATCTGTTTGGATTTTAAATTCATAGCACATAGTAATGTCTTGCATACTTTGAATATGAAACAGAACACTTTCCATCATTGATTATAGTTCTAGATCTTGTGCAGGTGGCAATGTTGATTATGGCATGGACATTCATCAGAAAGATCAACATGAAAATTCTGTACCTATCATGCAGTCTCAGCAGTTCTCTGTGGGAACTCCTACTCTCTCATCTTCTGACTATCCTCATTTGGTGATGTGCTGCTTAACAACTTTTCCCTTGTTTTGATCTTCAGATTGGGAGATCTGCTGGATTTAACCTAGGGAGCACATACTCACATCGACCCCAGCAGCAGCAGCAACATTCTCCTGCAGTCAGCAACAGCACGGTGTCCTTTCCGCCTGCTAATAATCAGGATCTCCTCCATTTACATGGTTCAGATATATTTCCATCTTCACATGCTGCATCCTATCACCAGCAGGTGTGCAATTCTATTAATGCAATTCTAAAGGAAGTAAATATTTTTACCTTGCAGGCATAATCAAACTGTTCCTTTACTTAGATATTTCCATTCTTGGTGTTTTATCAACTGAAATACAGTCTCAACCTTTTATTCTCAAGTATTAAAAAATACATACTCAATGGGTTTAAATGTTTCGTAGATCAATCAGTTGCCTGTATGTCTTAATGTCTTCCCCATTGAATTTTTTCAATATCAACATTTCATTTTCATATTCAGTCTAGTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAACTCAGTGTCTGGAATGGGTTATGACCAACTTATTCAGCAATATCAGCAGCATCACAGTCAACCGCAGTTCCGGTTGCAACATATGTCTGGTGTTAGCCAATCATTTAGAGATCAAGGGATGAAGTCTATGCAGGCAGCTCAATCTTCTCCTGACCCATTCGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCGCTCGGGATTGATTTGACCACGTTAGGATTAAATTTGAATTCAGCAGATAACCTTCACAAGACTTTTGGTTCCCCGTGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTTCTCTACATGTGAGTCTCTTCTCCTTTCCTCTCCCAGTCAACCTTCCTGCAGTTTTTATTTTTTTTTCTGAACTGATCATTGTTTTGGTTGACTACAGCAAGGATACTTCTCAAAATTCACTTTGGAAACGCTGTTTTATATATTTTTCAGGTGTGGTATATTTAAATAATTTGAACGTATTAATTTTGTAATCTTAATACATATTATTCTGATCTGTCTCGTTCTTCAGCATGCCCAAAGATGAAGCTCAGTTGTATGCTGCAAATGAACTGTAAGCTCTTATTATATATACCTACTGTGCAGTTTGTTATTTTCACCAAAGTTATATAAAGATAGTTGTGGGTAGAATTTCCCCTAAGGGCGATGTTGCCAACATTTTTTTGTTTGGTAGTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTCTGGTTCATTCGGGTCTCTAATATGGAACCGCTTGTGAAAACTAGCTCGTACGAGAGAGGATCTTATCTCTGTTTTGACCCTCACACATTTGAAACTGTCCGCAAGGTTTGGAGTTTAATCTATATTTTTTCATTGAAATGAGTTGATGATAGACCCAACCATTGCCGCTGATGTTACGTTGAATTGTGTTCAGGATAATTTTGTGCTTCACTACGAGATGGTGGAAAAGAGACCAGCTCTACCGCAACATTAGCCATTTTCTTTTTCCTTTTTATTAAATGTAAAAAGGTAATTTGTGGATTTTTGTGTTATTAGCCATAGCTGTGTTTGTAGAAGTAATATTTTGTTAAATTTGATAATTTTATATCCATTCTGATGTGGGCCCCCTTGTTATTGTAATGAGCCGTTTTTGCTTCCCGGAAAAAGACAACTGTAGCGAGGCATATGTTTGATCACCCGTCGTTCTACATGATTATATATTTGGTTATTAGCTTAGTTTAGTTTGTTCAACTTTATCATATTAATAATAGTAATACCCAATTGATTAAATACCTTACTGTGGTGATTATGTGGTTATGGGTTTGGATTCACTTCAATATGTTTACTCTCACCAGTACTCCACAAATCCCATTATGGTTTGTGCATTAAATTAATTTTATTCCTAGTTATTTTCTTAATTTTACTTTCGTTTTTTTTTCTTTTCTCTATTACTTTTCTTTATTGTTTCTTAAGAAAGGTTAGAGTCATAGTGATATAATTTTTTTATGAGATATATTTGATAGAAAAATAATAATTATTAGTTGAAGAAAGATTAAAAGAAAAAGTGATTTTTCTTATATAAATGAAAACCAAATTTTAAAACTGGTATATCATAAAATTTTAAATTAAATCATACTGTAATAAGAACTAAAATTAATAAATTTTAATTAATATGTCCTTAACCTGTTCTTTTCACAGGTCATAGCTCGAATTAGTTCTTATTGATTAACTTTAAATAAAAATATTTAAATTTTTAATCATTCTCACAACAGATAAATATGATTTAAATTAATAATTTTTAACATAATTCAGTTTTTTTAAATCAAAATCAAAATTTTAACATATTTATTTCGTTTAATAATATTTAAGAGTGAAAAAAAAAATTAAAATTATAGTTTTTTAATTGAATTAAAAAAAGAAAAGTCTATTTAGTATTATAATTTTTAAAATATAATTAATTTAAAATTAATTGTAGTAGTTTGGAGATTTATGAGAATCTAACGTTATTATTACAGAACAAATAAAAAGAGAGGGAAACTGTTTTGGTGGGTAAAGTTTCCGACTTTCTCTGTGATTCTCTTTCCCTCTCTCTTCCATTAGATTTAGGGCACACCAACACAATCTTTGTTACTCGACCACACATCTCTCCGATCATTATTCTGGTACTTTTTCATCTCTGATTTCTTTGATACAGACCAATTCCTTTCCATTTGTCATGAGTTCGATCTCCGATCTTCTCTCATTCTCATATCTTTCATATCCCTTCTTCTTCGTCCGCACCCTTCTTATTTTATTCTGTTCATCTATCAATTTCCATCCATTCTAGGGTTCCACGACATTCTTCAAAAGTTCGTGTTGTTTCTTGTTCTACTCTGAAGGATTCTTCAGTCCGAAGTAGTGTTGGAACTGCTTTTGGGCTAGAAGAATCAGTGCAGAAACACTGCTGCACTTCTTGGTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTGATATATCTATACCTAGAACTTCCCTGTAGTTCTCTTGGAGCTCCTGAATATGCTCCTCTTAACTTATATATTTGTTTATGGAAAATTCTCAAGATCATCCATGTCGTATCCCGCTTCAGGCTTGCTTGCAATTCCTGTAGAGCTACTGACACCATCCTATAGCTTCGAGTCAGTCTCATGTTACTTTTAGTAGTTCAACAGGACTTCATTCAGGTTAAACCTATGGGTTTCTTATGGAGGTTTGGTTCTAATACTTTGCATTTCGATTCCACTTCTCTCGCTAGACAGTTTTAGAAGCTGCCTGTACTCCAGTGACTGAAATTGAATGTGAGATGACAGAAAAATACTCGGTTCTAAAAGCGGCCTTGGACTTGTAATTGTCTTTTTGAGTCTACAAGGGAATGGTAATATGTCTGGAACATATCCGTACTCCTTGGTTTACCTATTATAGGCCCTGCAGTCGAATTGGGTTTATTTTTGGTGTTTTTACCTTACTTCTGAGCTAACTCTTAAATATAATTTTATTTTCAAACAGCTTCTCTATCTTCTGGCTCCCCAAAGACTGGAACAGCAGTTGTTTTTGACGAAGGAATGAAATTTGCCTAATTCTTTTTACGCCTACCTCATGCCATGTCGGGTTTACTTAATGTATTGTCTGCTATCTATGTATCTATTTGTCTACGATTGCATTGGGACGTGTATGGAGTTGAGTTGCAGATAAAAAAAAAATTACAAATGCTTTCATTTCTTATCTGGTTCTGTGCAGTACTCATTGACCCTCACGTATAGATTGGGGACCTTGTAGGAGAAATTCCAAATCTTGGGGTGTGCGTGTGTGTTGTTTTTCCATTTTTTTTTTTTAAATTTAATTTAAACTTCATGTAGGATTTTCATTGTAATTGGTTCAAGATTTTCATAGTATCCTTCTTTGTTGGGCTTTCTTTTTGTATGCCCTTGTATTTTTTCATTTTTATCAATGAAAGTTTGGTTTCATCTAAAAAAGGTGGTTCAATATTTTCTTGTTGGATACAAATGTCATTCTTTTTATTGTTGAGATTCCATTTTAATTGAATTCCTAATTCTTATTAGATTTCCGACTGATCTTGGTTGATTTAATCTTATGTTTAGAACTATCAGCCACATAAGCACGTGCATTTGATGTGTTAGCTTGTTTTGACGTAGTAGCCTGTTTTATGTGCTGCTCTCATTCCTTGTAAATGATTTATCATCCTCACGGTTTTATGTTGATGCATTATAATTCTACTGTAAAATTGTGTGTCAAGTTTAAAATTGCTCATGAAAACATGGTTTACTTATTGCCAAAGCTTTTGTTATTTGCAGTCATCTCTTAATGGATCGGCTTCAAATATCCCAGATGGTGCTGGGCGATCTTTTGCTACCTCATTTTCTAGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCTGGTGGGTGCATATTCCTGGAGTCTCTGTAGTTAGTTTTCTTTCAAATTTATGAAACTTAGAGGTCTCAATTTTCAGGAACCATTCAAGGGTTGCATAACATTCATGGAAGCTTCAATATTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGTACACTTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTCTCTCAGGTATTTTTCCAAGTGCAGGCTATTTATTCATAATTCAATGTCATCTTTATTAATTGAGATCATGAGCATGAGTTTTCTCTGAAGTTTTTTTGAGTCAAGTTTATGGTGCTCAACAAGAATTAGCCGTTTATGAAGTTTTTTCTATATGATCACTCTGCCTAGCAAATACAATCACTCTTTTATGATTAATTTTGAAAGACTAGACAATTATTGTTATAAAAGAAATTGACCAGTTAATAGCTTTGTCGATGAATGAATGATTGAGAGTTACATAGCGAATAGGATATCGGATCGTAGTGTTTATGATTTGACTTGATATTGGACTTTTTTTAGTTCATAGCTTTACCTTTTTTTTTTATTTATTTACAAACTCTTGTAATTGTTTATGTGCTTTCACTCCATTTTTACTGTTTTCTTTTCTTCTTTAGTTGTCTCACAGCAGCTCTCATGGGCACTCAGGAGTTGCAAATAGAGGAGTTATGAGTGTTGTAGGAAATCCTGGATTTAGTAGCAGCACAAATGCAGTTGGTGGTTCTATTCCTGGGATTCTGTCCAGTTCTGCCGGTATTGGTAATCGAAATGCTGTTCCAGGGTTGGGTGGATCTCCAATTTTGGGAAATGTAGGTCCTCGGATCACTAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGAAGTATAACTACTGGCGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTTAACCTTGGTGCAAATAATGGATCTGGAAGTTTATCTGTACAAGGACAAAACCGTTTGATGAGTGGTGCCCTTCCACAAGGTACAATCCCTTGAATTTCTATATGAATGCTTTTGTAATTATTCATAGTAATATTATATCCTCCCTTTTGTACTACTTTCTCTAAAATAAAAGGAACATATTGGAAATGAATCATTTTGTTTTGTTTGAAAGAGTGATGTGCGACATGTGGAAGCTATTTACTCATTTTACTTTGTTTTCTAGTACTATTTTATTCTATGTTCATATTTATGTGTTATTATTATTATTAATATTTAAAATTTTACTTAAGAAACTAGAGAACTTTATTGAACTGCCAAGCAACAAAAAACAAGGGAGATACCCCTGCTCAGCCAATGGTTACAAAATAGAAGTGCAATTTGCAGAAATATGCACAAAATGCTACAAAATTTATGTGTGATGTATATGTTATTTATGATAGAGTTGCGCTTGTTTACTTTAGTCTGATTAATATTTTAATTCTTATGCTATACTGACCAAATAATGGAAATGCATTCATTACTATGCTTGTATTTATATATGTATATTTATATGATATGTGTGTATATATATATATATATATATATATATATATATGTATGTGTATGTATGCATGTATGTGCTACCTTGTATACAAGTGTTCGTTGCTATTTTGACGTAGATGACATTTCTTGCTTCAGGATCTCAACAGGTCATTTCTATGTTGGGTAATTCTTATCCTAGTGCTGGAGGTCCCCTTTCCCAAAGCCACATGCAGAGTGTGAATAGTCTGAGCTCTCTGGGGATGTTGAATGATGTGATCTCTAATGACAATTCTCCTTTTGATATCAACGATTTCCCTCAGTTGAGTAGTCGTCCAAGTTCTGCAGGAGGTGCTCAAGGACAATTAAGTTAGTAACTAGACATTGATGAATTTTTTTTTAATAAATAATTTCAGTTATTATTATTATTATTATTGTATATCTCTGCAACAATTTTGACCATTAGAAATGTCATGTAAACATTTCAGGTTCGCTGAGAAAACAAGGTCTTAGTCCTATTGCCCAACAAAACCATGAGTTCAGCATTCAGAATGAAGACTTTCCAGCGTTACCTAGATTTAAAGGTGCAAATCCTTTTGTTTCCAGTCGGATGCATTCATGTAACTCATAAGACATAGCTTCGGTTTTTTCCTCTAATTTTTTTCAAGAATAAGTACAGTAACTTTGGAAAACTATTGCTTGTAAATATCCTAGCTGACCATGGTAGTTATAGCTGAAAAGATTAAATAGAATTTCAAATTCATTATTCAAGTAGGCAATTGCAATTATTAAGCTCAGCTGCTACTTGGTGACTTCTGACTTGTTTTTCTTTTTTCAGCTTGAATTATCAATTACATACACTAACCTTTTGCGTACTTTGGATTTAAAACACTTCCTTTTATTGGTTATAGTTCTAGATCTTGTGCAGGTGGCAATGCTGATTATGGGATGGATATTCATCAGACAGACCAACATGAAAATTCTATGCCTATGATGCAGTCTCAGCAGTTCTCTGTGGGCACTCTTTTGCTCTCTCTTCTGCTGACTATCTCATACGGTCATGGCCGAGCTAGTAAGCATTGTTAACATTTCTGTTTTTATCTTCAGATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCGCCTGCAAACAATCAGGATCTTCTTCATTTACATGGTTCTGATATGTTCCCATCTTCACATGCTGCATCCTATCACCAGCAGGTGTGCTTTTTTATCACTGTAAATGAAGATTCCCCCCCTTGCATTGAAGTTTTCACTTTGCAGGCATAAGGAATTGACCAATATATTTTTATTCTTGGTGTCTTTATTAACTTGAAAGCCAATCATTCCCATGTATTATATGAATTGAACGGGTGTAAATGTTTTGTAGATCAATTATAGCCTATGTCTTAAATCTCTTTTCCAATGAAGTTTTTCAACATCAACATGCCTTTGTTTTTCTTCAGTCTATTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAGTTCGGGTTCTGGAATGGGTTATGACCAACTTATCCAGCAATATCAGCAGCATCACGGTCAATCTCAGTTCCGATTGCAACCTTTGTCTGGTGTTAGCCAGTCATTTAGAGATCAGGGCTTGAAATATATGCAGTCAGCTCAATCTTCTCCTGATCCATTCGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCTCTCGGAATTGATTTGACCACGTTAGGATTAAATTTGAATTCATCAGATAACCTTCACAAGACTTTTGGCTCCCCTTGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTCCATGTAAGGTTCTTTACCTTTTACATCCTCCTCCTAGTCTATGTGAAACTTTCAACAGGTTCTTCTCAACTAATATTTTTTTTGTTAACTGCAGCAAGGATACTTCTCAAAATTTACTCTTGAGACACTTTTTTATATATTTTTTAGGTACGGTATATAAATACTTCAACGCTCTTTTTCTCCTTTTTTTAAACTTTTGTTATATAATTCTGCTCTGTCTTGTCCTGCAGCATGCCAAAAGATGAAGCTCAGTTGTATGCGTCAAATGAACTGTAAGTCTTATTATTGACTCTGTGCGGTTTGTTATTTTGACCATAAGTAATTTATGGGCGTGACTTAAGCTTGGACCAACCTTTTTTTGTATAGTTATAATAGAGGCTGGTTTTATCACAAAGAACAACGTTTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAACACTTACGAGAGAGGATCGTACCTCTGTTTAGACCCCCAAACATTTGAAACCGTCCGCAAGGTTTGTACTTTGTCAATACTTTTCATTGAAATGACCTATACCACTGCTGCCCCGTATTCCCATTGTGCTCATGTTGCGTCCATTGGCTTCAGGATAATTTTGTTCTTCACTACGAGATGGTAGAAAAGAGACCAGCTCTACCACAACATTAATTTTTGTTTTTAATAAAAAATGTAAAGGTAATTCGTGGATTCTTCACATGTAAGCCTTAGTTCTATTTGTAGAATTAATAGTTTGTAATTTGGTAAGCGTAATTGATCATGTAGGCCCTTGTAATTGTAATAAGCCGATTTATTGGGTTTCTTCTCTGCTGTTTTACAAGATACACTAGCTTAGCTTGAACATCGTTTATCTTATGAAGAGCTGTCACATAATTTCTATATTGATTTTAAAAATGAGTTCAGCATAGCATTTCTAGAACTGATGCTCCTTAATTCCAATGAAGTAGGACCCTGCTGTTGCTCGTTTGAACAACATCCTGCCAATCAATGTAAGTCCATTCTTCTACCTTGTTTTGAAACTGTTTTTTATTTTTATTCTTTTTGTTTTTAGAACTGTTTTTAAAATCTATATGTTTGATGACTTGTAAATGTAGATTTTTATGTTTCTATGTGAATAGAATAACTTTTTTTGATCTGAAAAATAGTGTTTTTTTTTTTTTTTAATTTCTACAGGAACACACTAAATTTGAAAGTTTAAATATTTTTACAGGAAAATAGTGTTTATAGATTTGTAACAAATTTAAATATTTTGAAAGTTTTCAATTTTACATCTAATAGATTTATGAGTTGTTATTGTGCAAGTTGAGGATCAATCAGACAAAAACGGGAGTCGTCGGAGACATGGATGTGGACGGAGAAGACTTTTCCTTTCTCCATCCTGCCTCGTGAACGTCCCTTTTAAATGTGTCTCAAGATGTGGTTTTATCACTGGTAGCTTGAATGTGTTTGAGACAATGTTACATTTTCGACATATAGTCAAACATCGTTGACCGGTTTTAGGGTTCTCACTACACATACAGCAGATGATCGAGCTTTGAGCCTCGTTTAAGTTAATAACACAGGAAATGAAAGAAAGTGGATAGTGAAAACCAAAGCACCCTACTACAGAACACTGTAAATAAGGGTCAGCCCACAAAACAGAGAATTCAAAGTCATTCATATCAACTACAGTACAGATTTACAGGTGAGATTATAAAGGCAGAGCAGGAAGCAGGAAGCAGGAAGCAGGAGCAGCCATGGCCTATGGATCACTGA

mRNA sequence

ATGTCGGGTTTACTTAATTCATCTGTTAATGGATCAGCTTCAAATCTTCCAGATGGTACTGGGCGATCTTTTGCTAACTCATTTTCTGGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCCGGAACTATCCAAGGGTTGCACAACATTCACGGAAACTTCAATCTTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGAACAATTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGTTATCTCATGGCAGCTCTCACGGACATTCAGGAGTCACAAATAGAGGAGGATTGGGTGTATCCCCAATTTTGGGAAATGCAGGTCCTCGGATCACAAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGAAGTATAACTACTGGCGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTTAACCTTGGTGCAAATAATGGATCTGGAAGTTTATCTGTACAAGGACAAAACCGTTTGATGAGTGGTGCCCTTCCACAAGGATCTCAACAGGTCATTTCTATGTTGGGTAATTCTTATCCTAGTGCTGGAGGTCCCCTTTCCCAAAGCCACATGCAGAGTGTGAATAGTCTGAGCTCTCTGGGGATGTTGAATGATGTGATCTCTAATGACAATTCTCCTTTTGATATCAACGATTTCCCTCAGTTGAGTAGTCGTCCAAGTTCTGCAGGAGGTGCTCAAGGACAATTAAGTTCGCTGAGAAAACAAGGTCTTAGTCCTATTGCCCAACAAAACCATGAGTTCAGCATTCAGAATGAAGACTTTCCAGCGTTACCTAGATTTAAAGGTGCAAATCCTTTTGTTTCCAGTCGGATGCATTCATGTGGCAATGCTGATTATGGGATGGATATTCATCAGACAGACCAACATGAAAATTCTATGCCTATGATGCAGTCTCAGCAGTTCTCTATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCGCCTGCAAACAATCAGGATCTTCTTCATTTACATGGTTCTGATATGTTCCCATCTTCACATGCTGCATCCTATCACCAGCAGTCTATTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAGTTCGGGTTCTGGAATGGGTTATGACCAACTTATCCAGCAATATCAGCAGCATCACGGTCAATCTCAGTTCCGATTGCAACCTTTGTCTGGTGTTAGCCAGTCATTTAGAGATCAGGGCTTGAAATATATGCAGTCAGCTCAATCTTCTCCTGATCCATTCGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCTCTCGGAATTGATTTGACCACGTTAGGATTAAATTTGAATTCATCAGATAACCTTCACAAGACTTTTGGCTCCCCTTGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTCCATCAAGGATACTTCTCAAAATTTACTCTTGAGACACTTTTTTATATATTTTTTAGCATGCCAAAAGATGAAGCTCAGTTGTATGCGTCAAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACAACGTTTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAACACTTACGAGAGAGGATCGTACCTCTGTTTAGACCCCCAAACATTTGAAACCGTCCGCAAGGACCCTGCTGTTGCTCGTTTGAACAACATCCTGCCAATCAATTACAGATTTACAGGTGAGATTATAAAGGCAGAGCAGGAAGCAGGAAGCAGGAAGCAGGAGCAGCCATGGCCTATGGATCACTGA

Coding sequence (CDS)

ATGTCGGGTTTACTTAATTCATCTGTTAATGGATCAGCTTCAAATCTTCCAGATGGTACTGGGCGATCTTTTGCTAACTCATTTTCTGGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCCGGAACTATCCAAGGGTTGCACAACATTCACGGAAACTTCAATCTTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGAACAATTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGTTATCTCATGGCAGCTCTCACGGACATTCAGGAGTCACAAATAGAGGAGGATTGGGTGTATCCCCAATTTTGGGAAATGCAGGTCCTCGGATCACAAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGAAGTATAACTACTGGCGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTTAACCTTGGTGCAAATAATGGATCTGGAAGTTTATCTGTACAAGGACAAAACCGTTTGATGAGTGGTGCCCTTCCACAAGGATCTCAACAGGTCATTTCTATGTTGGGTAATTCTTATCCTAGTGCTGGAGGTCCCCTTTCCCAAAGCCACATGCAGAGTGTGAATAGTCTGAGCTCTCTGGGGATGTTGAATGATGTGATCTCTAATGACAATTCTCCTTTTGATATCAACGATTTCCCTCAGTTGAGTAGTCGTCCAAGTTCTGCAGGAGGTGCTCAAGGACAATTAAGTTCGCTGAGAAAACAAGGTCTTAGTCCTATTGCCCAACAAAACCATGAGTTCAGCATTCAGAATGAAGACTTTCCAGCGTTACCTAGATTTAAAGGTGCAAATCCTTTTGTTTCCAGTCGGATGCATTCATGTGGCAATGCTGATTATGGGATGGATATTCATCAGACAGACCAACATGAAAATTCTATGCCTATGATGCAGTCTCAGCAGTTCTCTATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCGCCTGCAAACAATCAGGATCTTCTTCATTTACATGGTTCTGATATGTTCCCATCTTCACATGCTGCATCCTATCACCAGCAGTCTATTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAGTTCGGGTTCTGGAATGGGTTATGACCAACTTATCCAGCAATATCAGCAGCATCACGGTCAATCTCAGTTCCGATTGCAACCTTTGTCTGGTGTTAGCCAGTCATTTAGAGATCAGGGCTTGAAATATATGCAGTCAGCTCAATCTTCTCCTGATCCATTCGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCTCTCGGAATTGATTTGACCACGTTAGGATTAAATTTGAATTCATCAGATAACCTTCACAAGACTTTTGGCTCCCCTTGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTCCATCAAGGATACTTCTCAAAATTTACTCTTGAGACACTTTTTTATATATTTTTTAGCATGCCAAAAGATGAAGCTCAGTTGTATGCGTCAAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACAACGTTTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAACACTTACGAGAGAGGATCGTACCTCTGTTTAGACCCCCAAACATTTGAAACCGTCCGCAAGGACCCTGCTGTTGCTCGTTTGAACAACATCCTGCCAATCAATTACAGATTTACAGGTGAGATTATAAAGGCAGAGCAGGAAGCAGGAAGCAGGAAGCAGGAGCAGCCATGGCCTATGGATCACTGA

Protein sequence

MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGLGVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLSSLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKDPAVARLNNILPINYRFTGEIIKAEQEAGSRKQEQPWPMDH

Homology

[Close]

BLAST of CmoCh02G008440 vs. ExPASy Swiss-Prot
Match: Q52JK6 (Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana OX=4100 GN=VIP2 PE=1 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 1.5e-222
Identity = 412/600 (68.67%), Postives = 471/600 (78.50%), Query Frame = 0


Query: 60  MSGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG- 119
           M G LTSRN+ INNVPS GVQQ    +S GRF  NNLP ALSQ+  G+SHGHSG+T+RG 
Sbjct: 1   MQGTLTSRNTAINNVPSSGVQQSGNNLSGGRFVPNNLPSALSQIPQGNSHGHSGMTSRGG 60

Query: 120 -------------------------------------GLGVSPILGNAGPRITSSMGNMV 179
                                                GLGVSPILGNAGPR+T+S+GN+V
Sbjct: 61  TSVVGNPGYSSNTNGVGGSIPGILPTFAAIGNRSSVPGLGVSPILGNAGPRMTNSVGNIV 120

Query: 180 SGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLG 239
            GGNIGRSI++G GLS+PGLASRLN+ AN+GSG+L+VQG NRLMSG L Q S QV+SMLG
Sbjct: 121 GGGNIGRSISSGAGLSVPGLASRLNMNANSGSGNLNVQGPNRLMSGVLQQASPQVLSMLG 180

Query: 240 NSYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQL 299
           NSYP AGGPLSQ+H+Q++ + +S+G+LNDV SND SPFDINDFPQLSSRPSSAGG QGQL
Sbjct: 181 NSYP-AGGPLSQNHVQAIGNFNSMGLLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGQL 240

Query: 300 SSLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQ- 359
            SLRKQGLSPI QQN EFSIQNEDFPALP FKG            GNADY MD HQ +Q 
Sbjct: 241 GSLRKQGLSPIVQQNQEFSIQNEDFPALPGFKG------------GNADYAMDPHQKEQL 300

Query: 360 HENSMPMMQSQQFSIGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPANNQDLLHL 419
           H+N++ MMQ Q FS+GRSAGFNLG TY S+RPQQQ QH+P+VS+  VSFS  NNQDLL L
Sbjct: 301 HDNTLSMMQQQHFSMGRSAGFNLGGTYSSNRPQQQLQHAPSVSSGGVSFSNINNQDLLSL 360

Query: 420 HGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMG-YDQLIQQYQQHHGQSQFRLQ 479
           HGSD+F SSH +SY QQ  GPPGIGLRPL+S  + SG+G YDQLIQQYQQH GQSQFRLQ
Sbjct: 361 HGSDVFQSSH-SSYQQQGGGPPGIGLRPLNSSGTVSGIGSYDQLIQQYQQHQGQSQFRLQ 420

Query: 480 PLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLN 539
            +S + Q FRDQ LK MQS Q +PDPFG+LGLLSVIR+SDPDL SLALGIDLTTLGLNLN
Sbjct: 421 QMSTLGQPFRDQSLKSMQS-QVAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLN 480

Query: 540 SSDNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPK 599
           S++NL+KTFGSPWSDEPAKGDP+F VPQCY  K PP L+Q YFSKF L+TLFYIF+SMPK
Sbjct: 481 SAENLYKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKFQLDTLFYIFYSMPK 540

Query: 600 DEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           DEAQLYA+NELYNRGWFYH+E R WF+RV+NMEPLVKTN YERGSY+C DP T+ET+ KD
Sbjct: 541 DEAQLYAANELYNRGWFYHREHRLWFMRVANMEPLVKTNAYERGSYICFDPNTWETIHKD 585

[Close]

BLAST of CmoCh02G008440 vs. ExPASy Swiss-Prot
Match: Q9FPW4 (Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 GN=VIP2 PE=1 SV=2)

HSP 1 Score: 677.6 bits (1747), Expect = 1.5e-193
Identity = 386/660 (58.48%), Postives = 466/660 (70.61%), Query Frame = 0


Query: 5   LNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGAL 64
           L+SS+NGSASNLPDG+GRSF  S+SGQSGA SP FHH+G +QGLHNIHGN+N+ NM G L
Sbjct: 4   LHSSLNGSASNLPDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTL 63

Query: 65  TSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG------ 124
           TSRNS++N++PS GVQQP G+ SSGRFASNNLPV LSQLSHGSSHGHSG+ NRG      
Sbjct: 64  TSRNSSMNSIPSAGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNRGLNVVGN 123

Query: 125 -------------------------------GLGVSPILGNAGPRITSSMGNMVSGGNIG 184
                                          G+G+S +LGN+GPRIT+SMGNMV GGN+G
Sbjct: 124 PGFSSNANGVGGSIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNLG 183

Query: 185 RSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSA 244
           R+I++ GGLS+PGL+SRLNL AN+GSG L+VQGQNR+M G LPQGS QV+SMLGNSY + 
Sbjct: 184 RNISS-GGLSIPGLSSRLNLAANSGSG-LNVQGQNRMMGGVLPQGS-QVMSMLGNSYHTG 243

Query: 245 GGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDI-NDFPQLSSRPSSAGGAQGQLSSLRK 304
           GGPLSQ+H+QSVN++    ML+D   ND+S FDI NDFPQL+SRP SAGG QG L SLRK
Sbjct: 244 GGPLSQNHVQSVNNM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLRK 303

Query: 305 QGLS-PIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQ-HENS 364
           QGL  P+ QQN EFSIQNEDFPALP +KG            GN++Y MD+HQ +Q H+N+
Sbjct: 304 QGLGVPLVQQNQEFSIQNEDFPALPGYKG------------GNSEYPMDLHQKEQLHDNA 363

Query: 365 MPMMQSQQFSIGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSD 424
           M MM SQ FS+GRS GFNLG+TY SHRPQQQ QH+ +                       
Sbjct: 364 MSMMHSQNFSMGRSGGFNLGATYSSHRPQQQPQHTSSTG--------------------- 423

Query: 425 MFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGV 484
                          G  G+GLRPLSSP++ S +GYDQLIQQYQQH  QSQF +Q +S +
Sbjct: 424 ---------------GLQGLGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQQMSSI 483

Query: 485 SQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNL 544
           +Q FRD  +K   S QS  DPF LLGLL V+  S+P+L SLALGIDLTTLGL+LNS+ NL
Sbjct: 484 NQ-FRDSEMK---STQSEADPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNL 543

Query: 545 HKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQL 604
           +KTF SPW++EPAK + +F VP CY    PP L +  F +F+ E LFY F+SMPKDEAQL
Sbjct: 544 YKTFASPWTNEPAKSEVEFTVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQL 601

Query: 605 YASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKDPAVAR 624
           YA++ELY RGWFYHKE R WF RV   EPLV+  TYERG+Y  LDP +F+TVRK+  V +
Sbjct: 604 YAADELYERGWFYHKELRVWFFRVG--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVIK 601

[Close]

BLAST of CmoCh02G008440 vs. ExPASy Swiss-Prot
Match: Q9NZN8 (CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 5.4e-31
Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 463 DPFGLLGLLSVIRL--SDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAK-GD 522
           D FG++GLL+ IR   +DP +  LALG DLTTLGLNLNS +NL+  F SPW+  P +  D
Sbjct: 353 DQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQD 412

Query: 523 PDFNVPQCYL--IKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYH 582
            DF+VP  YL  I     L      ++  + LFY+++    D  QL A+ EL+NR W YH
Sbjct: 413 IDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYH 472

Query: 583 KEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           KE+R W  R   MEP +KTNTYERG+Y   D   +  V K+
Sbjct: 473 KEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKE 513

[Close]

BLAST of CmoCh02G008440 vs. ExPASy Swiss-Prot
Match: Q8C5L3 (CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-25
Identity = 144/546 (26.37%), Postives = 218/546 (39.93%), Query Frame = 0


Query: 90  RFASNNLPVALSQLSHGSSHGHSGVTNRGGLGVSPILGNAGPR---ITSSMGNMVSGGNI 149
           R  SNN P     LS G+    S VT   G+    +     P    +  +  NM++   +
Sbjct: 87  RGMSNNTPQLNRSLSQGTQL-PSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQV 146

Query: 150 GRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPS 209
           G+ I         G+ SR N  +++G GS      NR     +    QQ           
Sbjct: 147 GQGI---------GIPSRTNSMSSSGLGS-----PNRSSPSIICMPKQQPSRQPFTVNSM 206

Query: 210 AGGPLSQSHMQSVNSLSSLGMLNDVISNDN-SPFDINDFPQLS--SRPSSAGGAQGQLSS 269
           +G  ++++    +N+  S  + N    ++N +  D++DFP L+  +R   +G     ++ 
Sbjct: 207 SGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINP 266

Query: 270 LRKQG------LSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQ 329
           L  +         P  +Q+ +FSI NEDFPALP                           
Sbjct: 267 LAGRAPYVGMVTKPANEQSQDFSIHNEDFPALP--------------------------- 326

Query: 330 TDQHENSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLL 389
                                     GS+Y         +  + SN + S    ++ D  
Sbjct: 327 --------------------------GSSYK---DPTSSNDDSKSNLSTSGKTTSSTD-- 386

Query: 390 HLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRL 449
                  FP   +++                                   Q++ Q +  +
Sbjct: 387 ----GPKFPGDKSST----------------------------------TQNNNQQKKGI 446

Query: 450 QPLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRL--SDPDLASLALGIDLTTLGL 509
           Q L     +   QG+          D FG++GLL+ IR   +DP +  LALG DLTTLGL
Sbjct: 447 QVLPDGRVTNIPQGM--------VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGL 506

Query: 510 NLNSSDNLHKTFGSPWSDEPAK-GDPDFNVPQCYL--IKPPPTLHQGYFSKFTLETLFYI 569
           NLNS +NL+  F SPW+  P +  D DF+VP  YL  I     L      ++  + LFY+
Sbjct: 507 NLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYL 513

Query: 570 FFSMPKDEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTF 619
           ++    D  QL A+ EL+NR W YHKE+R W  R   MEP +KTNTYERG+Y   D   +
Sbjct: 567 YYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNW 513

[Close]

BLAST of CmoCh02G008440 vs. ExPASy Swiss-Prot
Match: P87240 (General negative regulator of transcription subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=not2 PE=1 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 9.9e-25
Identity = 66/168 (39.29%), Postives = 97/168 (57.74%), Query Frame = 0


Query: 458 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLN--SSDNLHKT-FGSPWSDE 517
           A  +   + L  LL +IR+ D ++++L LG DL  LG +L     D L  T   SPW++ 
Sbjct: 123 ADENAKQYMLESLLPIIRMEDSEMSTLQLGCDLAALGFDLAPVEEDRLISTNLFSPWAEL 182

Query: 518 PAK---GDPDFNVPQCYL-IKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELY 577
             K     P F +P CY  + PPP + + +  +F+ ETLFYIF++MP+D  Q  A+ EL 
Sbjct: 183 NTKKPVSQPMFKLPACYKNVNPPPAISKIF--QFSDETLFYIFYTMPRDVMQEAAAQELT 242

Query: 578 NRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           NR W +HKE R W   V  M+PL +T  +ERG Y+  DP  ++ ++KD
Sbjct: 243 NRNWRFHKELRVWLTPVPGMKPLQRTPQFERGYYMFFDPIHWKRIKKD 288

[Close]

BLAST of CmoCh02G008440 vs. ExPASy TrEMBL
Match: A0A6J1G5Z5 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451093 PE=3 SV=1)

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 594/656 (90.55%), Postives = 599/656 (91.31%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSS+NGSASN+PDG GRSFA SFS QSGAASPVFHHSGTIQGLHNIHG+FN+QNM
Sbjct: 1   MSGLLNSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG-- 120
           SGALTSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSH SSHGHSGV NRG  
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGVM 120

Query: 121 ------------------------------------GLGVSPILGNAGPRITSSMGNMVS 180
                                               GLG SPILGN GPRITSSMGNMVS
Sbjct: 121 SVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRITSSMGNMVS 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240
           GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN
Sbjct: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240

Query: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300
           SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS
Sbjct: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300

Query: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHE 360
           SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG            GNADYGMDIHQTDQHE
Sbjct: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG------------GNADYGMDIHQTDQHE 360

Query: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420
           NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS
Sbjct: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420

Query: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480
           DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG
Sbjct: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480

Query: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540
           VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN
Sbjct: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540

Query: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600
           LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ
Sbjct: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600

Query: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD
Sbjct: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 644

[Close]

BLAST of CmoCh02G008440 vs. ExPASy TrEMBL
Match: A0A6J1L4Y9 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499942 PE=3 SV=1)

HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 582/656 (88.72%), Postives = 596/656 (90.85%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSS+NGSASNLPDG GRSFA SFS QSGAASPVFHHSGTIQGLHNIHG+FN+QNM
Sbjct: 1   MSGLLNSSLNGSASNLPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG-- 120
           SGALTSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSH SSHGHSGV NRG  
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGM 120

Query: 121 ------------------------------------GLGVSPILGNAGPRITSSMGNMVS 180
                                               GLGVSPILGN GPRITSSMGNMVS
Sbjct: 121 SVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGVSPILGNVGPRITSSMGNMVS 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240
           GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN
Sbjct: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240

Query: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300
           SYPSAGGPLSQSH+QSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS
Sbjct: 241 SYPSAGGPLSQSHVQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300

Query: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHE 360
           SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG            GNADYGM+IHQTDQHE
Sbjct: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG------------GNADYGMEIHQTDQHE 360

Query: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420
           +SMP MQ+QQFSIGRSAGFNLGS+Y+HRPQQQQQHSPAVSNS+VSFSPANNQDLLHLHGS
Sbjct: 361 SSMPTMQAQQFSIGRSAGFNLGSSYAHRPQQQQQHSPAVSNSSVSFSPANNQDLLHLHGS 420

Query: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480
           DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG
Sbjct: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480

Query: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540
           VSQSFRDQGLK MQ+AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN
Sbjct: 481 VSQSFRDQGLKSMQTAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540

Query: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600
           LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ
Sbjct: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600

Query: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           LYASNELYNRGWFYHKEQR WFIRVS++EPLVKTNTYERGSYLC DPQTFETVRKD
Sbjct: 601 LYASNELYNRGWFYHKEQRSWFIRVSHIEPLVKTNTYERGSYLCFDPQTFETVRKD 644

[Close]

BLAST of CmoCh02G008440 vs. ExPASy TrEMBL
Match: A0A6J1G5W2 (probable NOT transcription complex subunit VIP2 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 1104.7 bits (2856), Expect = 0.0e+00
Identity = 566/618 (91.59%), Postives = 587/618 (94.98%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM
Sbjct: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL 120
           SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL 120

Query: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQG 180
           GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGAN+GSGSL+VQG
Sbjct: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQG 180

Query: 181 QNRLMSGALPQGSQQVISMLGNSYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFD 240
           QNRLMSG LPQGSQQVISML NSYPSAGGPLSQ+H+Q+VNSL+SLGMLNDV S+DNSPFD
Sbjct: 181 QNRLMSGVLPQGSQQVISMLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFD 240

Query: 241 INDFPQLSSRPSSAGGAQGQLSSLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVS 300
           INDFPQL+SRPSSAGG QGQLSSLRKQGLSPI QQN EFSIQ+EDFPAL RFKG      
Sbjct: 241 INDFPQLTSRPSSAGGPQGQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKG------ 300

Query: 301 SRMHSCGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA 360
                 GN DYGMDIHQ DQHENS+P+MQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA
Sbjct: 301 ------GNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA 360

Query: 361 VSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYD 420
           VSNSTVSF PANNQDLLHLHGSD+FPSSHAASYHQQS GPPGIGLRPLSSP+S SGMGYD
Sbjct: 361 VSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIGLRPLSSPNSVSGMGYD 420

Query: 421 QLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPD 480
           QLIQQYQQHH Q QFRLQ +SGVSQSFRDQG+K MQ+AQSSPDPFGLLGLLSVIRLSDPD
Sbjct: 421 QLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPD 480

Query: 481 LASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGY 540
           LASLALGIDLTTLGLNLNS+DNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LHQGY
Sbjct: 481 LASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGY 540

Query: 541 FSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYE 600
           FSKFTLETLFYIFFSMPKDEAQLYA+NELYNRGWFYHKE RFWFIRVSNMEPLVKT++YE
Sbjct: 541 FSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYE 600

Query: 601 RGSYLCLDPQTFETVRKD 619
           RGSYLC DP TFETVRKD
Sbjct: 601 RGSYLCFDPHTFETVRKD 606

[Close]

BLAST of CmoCh02G008440 vs. ExPASy TrEMBL
Match: A0A6J1KYQ8 (probable NOT transcription complex subunit VIP2 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111499941 PE=3 SV=1)

HSP 1 Score: 1096.6 bits (2835), Expect = 0.0e+00
Identity = 561/618 (90.78%), Postives = 585/618 (94.66%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSSVNGSASNLPDG+GRSFANSFSGQSGAASPVFHHSG+IQGLHNIHGNFNLQNM
Sbjct: 1   MSGLLNSSVNGSASNLPDGSGRSFANSFSGQSGAASPVFHHSGSIQGLHNIHGNFNLQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL 120
           SGALTSRNSTINNVPSGGVQQPTG ISSGRFASNNLPVALSQLSHGSSHGHSGV NRGGL
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGAISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGL 120

Query: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQG 180
           GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGAN+GSGSL+VQG
Sbjct: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQG 180

Query: 181 QNRLMSGALPQGSQQVISMLGNSYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFD 240
           QNRLMSG LPQGSQQVISML NSYPSAGGPLSQ+H+Q+VNSL+SLGMLNDV ++DNSPFD
Sbjct: 181 QNRLMSGVLPQGSQQVISMLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNASDNSPFD 240

Query: 241 INDFPQLSSRPSSAGGAQGQLSSLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVS 300
           INDFPQL+SRPSSAGG QGQLSSLRKQGLSPI QQN EFSIQ+EDFPAL RFKG      
Sbjct: 241 INDFPQLTSRPSSAGGPQGQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKG------ 300

Query: 301 SRMHSCGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA 360
                 GN DYGMDIHQ DQHENS+P+MQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA
Sbjct: 301 ------GNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA 360

Query: 361 VSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYD 420
           VSNSTVSF PANNQDLLHLHGSD+FPSSHAASYHQQS GPPGIGLRPLSSP+S SGMGYD
Sbjct: 361 VSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIGLRPLSSPNSVSGMGYD 420

Query: 421 QLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPD 480
           QLIQQYQQHH Q QFRLQ +SGVSQSFRDQG+K MQ+AQSSPDPFGLLGLLSVIRLSDPD
Sbjct: 421 QLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPD 480

Query: 481 LASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGY 540
           LASLALGIDLTTLGLNLNS+DNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LHQGY
Sbjct: 481 LASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGY 540

Query: 541 FSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYE 600
           FSKFTLETLFYIFFSMPKDEAQLYA+NELYNRGWFYHKE RFWFIRVSNMEPLVKT++YE
Sbjct: 541 FSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYE 600

Query: 601 RGSYLCLDPQTFETVRKD 619
           RGSYLC DP TFETVRKD
Sbjct: 601 RGSYLCFDPHTFETVRKD 606

[Close]

BLAST of CmoCh02G008440 vs. ExPASy TrEMBL
Match: A0A6J1G5I6 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 1085.9 bits (2807), Expect = 0.0e+00
Identity = 566/656 (86.28%), Postives = 587/656 (89.48%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM
Sbjct: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG-- 120
           SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG  
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGI 120

Query: 121 ------------------------------------GLGVSPILGNAGPRITSSMGNMVS 180
                                               GLGVSPILGNAGPRITSSMGNMVS
Sbjct: 121 SVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVS 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240
           GGNIGRSITTGGGLSLPGLASRLNLGAN+GSGSL+VQGQNRLMSG LPQGSQQVISML N
Sbjct: 181 GGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSN 240

Query: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300
           SYPSAGGPLSQ+H+Q+VNSL+SLGMLNDV S+DNSPFDINDFPQL+SRPSSAGG QGQLS
Sbjct: 241 SYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQGQLS 300

Query: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHE 360
           SLRKQGLSPI QQN EFSIQ+EDFPAL RFKG            GN DYGMDIHQ DQHE
Sbjct: 301 SLRKQGLSPIVQQNQEFSIQSEDFPALSRFKG------------GNVDYGMDIHQKDQHE 360

Query: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420
           NS+P+MQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSF PANNQDLLHLHGS
Sbjct: 361 NSVPIMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGS 420

Query: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480
           D+FPSSHAASYHQQS GPPGIGLRPLSSP+S SGMGYDQLIQQYQQHH Q QFRLQ +SG
Sbjct: 421 DIFPSSHAASYHQQSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSG 480

Query: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540
           VSQSFRDQG+K MQ+AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNS+DN
Sbjct: 481 VSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADN 540

Query: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600
           LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LHQGYFSKFTLETLFYIFFSMPKDEAQ
Sbjct: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQ 600

Query: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           LYA+NELYNRGWFYHKE RFWFIRVSNMEPLVKT++YERGSYLC DP TFETVRKD
Sbjct: 601 LYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFETVRKD 644

[Close]

BLAST of CmoCh02G008440 vs. NCBI nr
Match: XP_022947130.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 594/656 (90.55%), Postives = 599/656 (91.31%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSS+NGSASN+PDG GRSFA SFS QSGAASPVFHHSGTIQGLHNIHG+FN+QNM
Sbjct: 1   MSGLLNSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG-- 120
           SGALTSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSH SSHGHSGV NRG  
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGVM 120

Query: 121 ------------------------------------GLGVSPILGNAGPRITSSMGNMVS 180
                                               GLG SPILGN GPRITSSMGNMVS
Sbjct: 121 SVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRITSSMGNMVS 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240
           GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN
Sbjct: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240

Query: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300
           SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS
Sbjct: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300

Query: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHE 360
           SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG            GNADYGMDIHQTDQHE
Sbjct: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG------------GNADYGMDIHQTDQHE 360

Query: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420
           NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS
Sbjct: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420

Query: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480
           DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG
Sbjct: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480

Query: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540
           VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN
Sbjct: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540

Query: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600
           LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ
Sbjct: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600

Query: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD
Sbjct: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 644

[Close]

BLAST of CmoCh02G008440 vs. NCBI nr
Match: XP_023532183.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 587/656 (89.48%), Postives = 597/656 (91.01%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSS+NGSASN+PDG GRSFA SFS QSGAASPVFHHSGTIQGLHNIHG+FN+QNM
Sbjct: 1   MSGLLNSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG-- 120
           SGALTSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSH SSHGHSGV NRG  
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGM 120

Query: 121 ------------------------------------GLGVSPILGNAGPRITSSMGNMVS 180
                                               GLG SPILGN GPR+TSSMGNMVS
Sbjct: 121 SVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRLTSSMGNMVS 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240
           GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN
Sbjct: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240

Query: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300
           SYPSAGGPLSQ+H+QSVNSL+SLGMLNDVISNDNSPFDINDFPQLSSRPSSAGG+QGQLS
Sbjct: 241 SYPSAGGPLSQNHVQSVNSLNSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGSQGQLS 300

Query: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHE 360
           SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG            GNADYGMDIHQTDQHE
Sbjct: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG------------GNADYGMDIHQTDQHE 360

Query: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420
           NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS
Sbjct: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420

Query: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480
           DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG
Sbjct: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480

Query: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540
           VSQSFRDQGLK MQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN
Sbjct: 481 VSQSFRDQGLKSMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540

Query: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600
           LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ
Sbjct: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600

Query: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLC DPQTFETVRKD
Sbjct: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCFDPQTFETVRKD 644

[Close]

BLAST of CmoCh02G008440 vs. NCBI nr
Match: XP_023532184.1 (probable NOT transcription complex subunit VIP2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1120.9 bits (2898), Expect = 0.0e+00
Identity = 586/656 (89.33%), Postives = 596/656 (90.85%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSS+NGSASN+PDG GRSFA SFS QSGAASPVFHHSGTIQGLHNIHG+FN+QNM
Sbjct: 1   MSGLLNSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG-- 120
           SGALTSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSH SSHGHSGV NRG  
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGM 120

Query: 121 ------------------------------------GLGVSPILGNAGPRITSSMGNMVS 180
                                               GLG SPILGN GPR+TSSMGNMVS
Sbjct: 121 SVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRLTSSMGNMVS 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240
           GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN
Sbjct: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240

Query: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300
           SYPSAGGPLSQ+H+QSVNSL+SLGMLNDVISNDNSPFDINDFPQLSSRPSSAGG+QGQLS
Sbjct: 241 SYPSAGGPLSQNHVQSVNSLNSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGSQGQLS 300

Query: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHE 360
           SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG            GNADYGMDIHQTDQHE
Sbjct: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG------------GNADYGMDIHQTDQHE 360

Query: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420
           NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS
Sbjct: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420

Query: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480
           DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG
Sbjct: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480

Query: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540
           VSQSFRDQGLK MQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN
Sbjct: 481 VSQSFRDQGLKSMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540

Query: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600
           LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH GYFSKFTLETLFYIFFSMPKDEAQ
Sbjct: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH-GYFSKFTLETLFYIFFSMPKDEAQ 600

Query: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLC DPQTFETVRKD
Sbjct: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCFDPQTFETVRKD 643

[Close]

BLAST of CmoCh02G008440 vs. NCBI nr
Match: XP_023007444.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 582/656 (88.72%), Postives = 596/656 (90.85%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSS+NGSASNLPDG GRSFA SFS QSGAASPVFHHSGTIQGLHNIHG+FN+QNM
Sbjct: 1   MSGLLNSSLNGSASNLPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG-- 120
           SGALTSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSH SSHGHSGV NRG  
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGM 120

Query: 121 ------------------------------------GLGVSPILGNAGPRITSSMGNMVS 180
                                               GLGVSPILGN GPRITSSMGNMVS
Sbjct: 121 SVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGVSPILGNVGPRITSSMGNMVS 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240
           GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN
Sbjct: 181 GGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGN 240

Query: 241 SYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300
           SYPSAGGPLSQSH+QSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS
Sbjct: 241 SYPSAGGPLSQSHVQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLS 300

Query: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQHE 360
           SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG            GNADYGM+IHQTDQHE
Sbjct: 301 SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKG------------GNADYGMEIHQTDQHE 360

Query: 361 NSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGS 420
           +SMP MQ+QQFSIGRSAGFNLGS+Y+HRPQQQQQHSPAVSNS+VSFSPANNQDLLHLHGS
Sbjct: 361 SSMPTMQAQQFSIGRSAGFNLGSSYAHRPQQQQQHSPAVSNSSVSFSPANNQDLLHLHGS 420

Query: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480
           DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG
Sbjct: 421 DMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSG 480

Query: 481 VSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540
           VSQSFRDQGLK MQ+AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN
Sbjct: 481 VSQSFRDQGLKSMQTAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDN 540

Query: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600
           LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ
Sbjct: 541 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQ 600

Query: 601 LYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKD 619
           LYASNELYNRGWFYHKEQR WFIRVS++EPLVKTNTYERGSYLC DPQTFETVRKD
Sbjct: 601 LYASNELYNRGWFYHKEQRSWFIRVSHIEPLVKTNTYERGSYLCFDPQTFETVRKD 644

[Close]

BLAST of CmoCh02G008440 vs. NCBI nr
Match: XP_022947129.1 (probable NOT transcription complex subunit VIP2 isoform X4 [Cucurbita moschata])

HSP 1 Score: 1104.7 bits (2856), Expect = 0.0e+00
Identity = 566/618 (91.59%), Postives = 587/618 (94.98%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM
Sbjct: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL 120
           SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL
Sbjct: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL 120

Query: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQG 180
           GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGAN+GSGSL+VQG
Sbjct: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQG 180

Query: 181 QNRLMSGALPQGSQQVISMLGNSYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFD 240
           QNRLMSG LPQGSQQVISML NSYPSAGGPLSQ+H+Q+VNSL+SLGMLNDV S+DNSPFD
Sbjct: 181 QNRLMSGVLPQGSQQVISMLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFD 240

Query: 241 INDFPQLSSRPSSAGGAQGQLSSLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGANPFVS 300
           INDFPQL+SRPSSAGG QGQLSSLRKQGLSPI QQN EFSIQ+EDFPAL RFKG      
Sbjct: 241 INDFPQLTSRPSSAGGPQGQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKG------ 300

Query: 301 SRMHSCGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA 360
                 GN DYGMDIHQ DQHENS+P+MQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA
Sbjct: 301 ------GNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPA 360

Query: 361 VSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYD 420
           VSNSTVSF PANNQDLLHLHGSD+FPSSHAASYHQQS GPPGIGLRPLSSP+S SGMGYD
Sbjct: 361 VSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIGLRPLSSPNSVSGMGYD 420

Query: 421 QLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPD 480
           QLIQQYQQHH Q QFRLQ +SGVSQSFRDQG+K MQ+AQSSPDPFGLLGLLSVIRLSDPD
Sbjct: 421 QLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPD 480

Query: 481 LASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGY 540
           LASLALGIDLTTLGLNLNS+DNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LHQGY
Sbjct: 481 LASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGY 540

Query: 541 FSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYE 600
           FSKFTLETLFYIFFSMPKDEAQLYA+NELYNRGWFYHKE RFWFIRVSNMEPLVKT++YE
Sbjct: 541 FSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYE 600

Query: 601 RGSYLCLDPQTFETVRKD 619
           RGSYLC DP TFETVRKD
Sbjct: 601 RGSYLCFDPHTFETVRKD 606

[Close]

BLAST of CmoCh02G008440 vs. TAIR 10
Match: AT1G07705.2 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 808.5 bits (2087), Expect = 3.9e-234
Identity = 434/624 (69.55%), Postives = 509/624 (81.57%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MS LLNSS+NGS SNL DG+GR+F +SFSGQSGAASPVFHH+G+IQGLHNIHGNFN+ N+
Sbjct: 1   MSSLLNSSINGSTSNLSDGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNL 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL 120
           +G+L SRNS++N VPS GVQQ  G+IS+GRFAS+N+PVALSQ+SHGSSHGHSG+TNRGGL
Sbjct: 61  AGSLGSRNSSLNGVPSAGVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGL 120

Query: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQG 180
           GVSPILGN G R+TSSMGNMV GG +GR++++GGGLS+P L SRLNL  N+GSG++   G
Sbjct: 121 GVSPILGNVGSRMTSSMGNMVGGGTMGRTLSSGGGLSIPSLGSRLNLAVNSGSGNI---G 180

Query: 181 QNRLMSGALPQGSQQVISMLGNSYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFD 240
           QNR+M G LPQGS QV+SMLGNSYPSAGG LSQ+H+Q++NSLSS+G+LND+ SND SPFD
Sbjct: 181 QNRMMGGVLPQGSPQVLSMLGNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFD 240

Query: 241 I-NDFPQLSSRPSSAGGAQGQLSSLRKQGL--SPIAQQNHEFSIQNEDFPALPRFKGANP 300
           I NDFPQL+SRPSSA G+QGQL S  KQGL  SPI QQN EFSIQNEDFPALP +KG+  
Sbjct: 241 INNDFPQLTSRPSSA-GSQGQLGSRLKQGLGISPIVQQNQEFSIQNEDFPALPGYKGS-- 300

Query: 301 FVSSRMHSCGNADYGMDIHQTDQ-HENSMPMMQSQQFSIGRSAGFNLGSTY-SHRPQQQQ 360
                     +ADY MD+H  +Q HENS+ MMQSQQ S+GRS GFNLG  Y SHRPQQQQ
Sbjct: 301 ----------SADYPMDLHHKEQLHENSVLMMQSQQLSMGRSGGFNLGGAYTSHRPQQQQ 360

Query: 361 QHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGS 420
           QH+ AVS+S VS           LHGSD+F SSH   YH Q+ G PGIGLR ++S +S +
Sbjct: 361 QHAQAVSSSGVS-----------LHGSDIFSSSH-PPYHSQTGGAPGIGLRSMNSANSIT 420

Query: 421 GMGYD-QLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVI 480
           GMGYD QLIQQYQ     +Q+RLQ +S  SQ FRD GLK MQS QS+PD FGLLGLLSVI
Sbjct: 421 GMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDVGLKSMQSTQSNPDRFGLLGLLSVI 480

Query: 481 RLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP 540
           ++SDPDL SLALGIDLTTLGLNLNS++NLHKTFGSPWS+EP+K DP+F+VPQCY  K PP
Sbjct: 481 KMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWSNEPSKVDPEFSVPQCYYAKNPP 540

Query: 541 TLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLV 600
            LHQG F+K  +ETLFY+F+SMPKDEAQLYA+NELYNRGWFYHKE R WFIR+   EPLV
Sbjct: 541 PLHQGLFAKLLVETLFYVFYSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRIG--EPLV 593

Query: 601 KTNTYERGSYLCLDPQTFETVRKD 619
           KTN YERGSY C DP +FE V+K+
Sbjct: 601 KTNAYERGSYHCFDPNSFEIVQKE 593

[Close]

BLAST of CmoCh02G008440 vs. TAIR 10
Match: AT1G07705.1 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 731.5 bits (1887), Expect = 6.0e-211
Identity = 399/575 (69.39%), Postives = 470/575 (81.74%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MS LLNSS+NGS SNL DG+GR+F +SFSGQSGAASPVFHH+G+IQGLHNIHGNFN+ N+
Sbjct: 1   MSSLLNSSINGSTSNLSDGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNL 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGL 120
           +G+L SRNS++N VPS GVQQ  G+IS+GRFAS+N+PVALSQ+SHGSSHGHSG+TNRGGL
Sbjct: 61  AGSLGSRNSSLNGVPSAGVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGL 120

Query: 121 GVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQG 180
           GVSPILGN G R+TSSMGNMV GG +GR++++GGGLS+P L SRLNL  N+GSG++   G
Sbjct: 121 GVSPILGNVGSRMTSSMGNMVGGGTMGRTLSSGGGLSIPSLGSRLNLAVNSGSGNI---G 180

Query: 181 QNRLMSGALPQGSQQVISMLGNSYPSAGGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFD 240
           QNR+M G LPQGS QV+SMLGNSYPSAGG LSQ+H+Q++NSLSS+G+LND+ SND SPFD
Sbjct: 181 QNRMMGGVLPQGSPQVLSMLGNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFD 240

Query: 241 I-NDFPQLSSRPSSAGGAQGQLSSLRKQGL--SPIAQQNHEFSIQNEDFPALPRFKGANP 300
           I NDFPQL+SRPSSA G+QGQL S  KQGL  SPI QQN EFSIQNEDFPALP +KG+  
Sbjct: 241 INNDFPQLTSRPSSA-GSQGQLGSRLKQGLGISPIVQQNQEFSIQNEDFPALPGYKGS-- 300

Query: 301 FVSSRMHSCGNADYGMDIHQTDQ-HENSMPMMQSQQFSIGRSAGFNLGSTY-SHRPQQQQ 360
                     +ADY MD+H  +Q HENS+ MMQSQQ S+GRS GFNLG  Y SHRPQQQQ
Sbjct: 301 ----------SADYPMDLHHKEQLHENSVLMMQSQQLSMGRSGGFNLGGAYTSHRPQQQQ 360

Query: 361 QHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGS 420
           QH+ AVS+S VS           LHGSD+F SSH   YH Q+ G PGIGLR ++S +S +
Sbjct: 361 QHAQAVSSSGVS-----------LHGSDIFSSSH-PPYHSQTGGAPGIGLRSMNSANSIT 420

Query: 421 GMGYD-QLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQSSPDPFGLLGLLSVI 480
           GMGYD QLIQQYQ     +Q+RLQ +S  SQ FRD GLK MQS QS+PD FGLLGLLSVI
Sbjct: 421 GMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDVGLKSMQSTQSNPDRFGLLGLLSVI 480

Query: 481 RLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP 540
           ++SDPDL SLALGIDLTTLGLNLNS++NLHKTFGSPWS+EP+K DP+F+VPQCY  K PP
Sbjct: 481 KMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWSNEPSKVDPEFSVPQCYYAKNPP 540

Query: 541 TLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNEL 570
            LHQG F+K  +ETLFY+F+SMPKDEAQLYA+NEL
Sbjct: 541 PLHQGLFAKLLVETLFYVFYSMPKDEAQLYAANEL 546

[Close]

BLAST of CmoCh02G008440 vs. TAIR 10
Match: AT5G59710.1 (VIRE2 interacting protein 2 )

HSP 1 Score: 677.6 bits (1747), Expect = 1.0e-194
Identity = 386/660 (58.48%), Postives = 466/660 (70.61%), Query Frame = 0


Query: 5   LNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGAL 64
           L+SS+NGSASNLPDG+GRSF  S+SGQSGA SP FHH+G +QGLHNIHGN+N+ NM G L
Sbjct: 4   LHSSLNGSASNLPDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTL 63

Query: 65  TSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRG------ 124
           TSRNS++N++PS GVQQP G+ SSGRFASNNLPV LSQLSHGSSHGHSG+ NRG      
Sbjct: 64  TSRNSSMNSIPSAGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNRGLNVVGN 123

Query: 125 -------------------------------GLGVSPILGNAGPRITSSMGNMVSGGNIG 184
                                          G+G+S +LGN+GPRIT+SMGNMV GGN+G
Sbjct: 124 PGFSSNANGVGGSIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNLG 183

Query: 185 RSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSA 244
           R+I++ GGLS+PGL+SRLNL AN+GSG L+VQGQNR+M G LPQGS QV+SMLGNSY + 
Sbjct: 184 RNISS-GGLSIPGLSSRLNLAANSGSG-LNVQGQNRMMGGVLPQGS-QVMSMLGNSYHTG 243

Query: 245 GGPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDI-NDFPQLSSRPSSAGGAQGQLSSLRK 304
           GGPLSQ+H+QSVN++    ML+D   ND+S FDI NDFPQL+SRP SAGG QG L SLRK
Sbjct: 244 GGPLSQNHVQSVNNM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLRK 303

Query: 305 QGLS-PIAQQNHEFSIQNEDFPALPRFKGANPFVSSRMHSCGNADYGMDIHQTDQ-HENS 364
           QGL  P+ QQN EFSIQNEDFPALP +KG            GN++Y MD+HQ +Q H+N+
Sbjct: 304 QGLGVPLVQQNQEFSIQNEDFPALPGYKG------------GNSEYPMDLHQKEQLHDNA 363

Query: 365 MPMMQSQQFSIGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSD 424
           M MM SQ FS+GRS GFNLG+TY SHRPQQQ QH+ +                       
Sbjct: 364 MSMMHSQNFSMGRSGGFNLGATYSSHRPQQQPQHTSSTG--------------------- 423

Query: 425 MFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGV 484
                          G  G+GLRPLSSP++ S +GYDQLIQQYQQH  QSQF +Q +S +
Sbjct: 424 ---------------GLQGLGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQQMSSI 483

Query: 485 SQSFRDQGLKYMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNL 544
           +Q FRD  +K   S QS  DPF LLGLL V+  S+P+L SLALGIDLTTLGL+LNS+ NL
Sbjct: 484 NQ-FRDSEMK---STQSEADPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNL 543

Query: 545 HKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQL 604
           +KTF SPW++EPAK + +F VP CY    PP L +  F +F+ E LFY F+SMPKDEAQL
Sbjct: 544 YKTFASPWTNEPAKSEVEFTVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQL 601

Query: 605 YASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQTFETVRKDPAVAR 624
           YA++ELY RGWFYHKE R WF RV   EPLV+  TYERG+Y  LDP +F+TVRK+  V +
Sbjct: 604 YAADELYERGWFYHKELRVWFFRVG--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVIK 601

[Close]

BLAST of CmoCh02G008440 vs. TAIR 10
Match: AT5G18230.1 (transcription regulator NOT2/NOT3/NOT5 family protein )

HSP 1 Score: 52.0 bits (123), Expect = 2.1e-06
Identity = 30/97 (30.93%), Postives = 46/97 (47.42%), Query Frame = 0


Query: 515 PAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGW 574
           PA     F   Q  +I  P    +     +  +TLF+ F+       Q  A+ EL  + W
Sbjct: 718 PAITPQTFPQTQAPIINNPLLWERLGSDAYGTDTLFFAFYYQQNSYQQYLAAKELKKQSW 777

Query: 575 FYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQT 612
            YH++   WF R  + EP + T+ YE+G+Y+  D QT
Sbjct: 778 RYHRKFNTWFQR--HKEPKIATDEYEQGAYVYFDFQT 812

[Close]

BLAST of CmoCh02G008440 vs. TAIR 10
Match: AT5G18230.2 (transcription regulator NOT2/NOT3/NOT5 family protein )

HSP 1 Score: 52.0 bits (123), Expect = 2.1e-06
Identity = 30/97 (30.93%), Postives = 46/97 (47.42%), Query Frame = 0


Query: 515 PAKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGW 574
           PA     F   Q  +I  P    +     +  +TLF+ F+       Q  A+ EL  + W
Sbjct: 720 PAITPQTFPQTQAPIINNPLLWERLGSDAYGTDTLFFAFYYQQNSYQQYLAAKELKKQSW 779

Query: 575 FYHKEQRFWFIRVSNMEPLVKTNTYERGSYLCLDPQT 612
            YH++   WF R  + EP + T+ YE+G+Y+  D QT
Sbjct: 780 RYHRKFNTWFQR--HKEPKIATDEYEQGAYVYFDFQT 814

The following BLAST results are available for this feature:

BLAST of CmoCh02G008440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q52JK6	1.5e-222	68.67	Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthami...	[more]
Q9FPW4	1.5e-193	58.48	Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9NZN8	5.4e-31	46.58	CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 S...	[more]
Q8C5L3	1.2e-25	26.37	CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 ...	[more]
P87240	9.9e-25	39.29	General negative regulator of transcription subunit 2 OS=Schizosaccharomyces pom...	[more]

BLAST of CmoCh02G008440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5Z5	0.0e+00	90.55	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1L4Y9	0.0e+00	88.72	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1G5W2	0.0e+00	91.59	probable NOT transcription complex subunit VIP2 isoform X4 OS=Cucurbita moschata...	[more]
A0A6J1KYQ8	0.0e+00	90.78	probable NOT transcription complex subunit VIP2 isoform X4 OS=Cucurbita maxima O...	[more]
A0A6J1G5I6	0.0e+00	86.28	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata...	[more]

BLAST of CmoCh02G008440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947130.1	0.0e+00	90.55	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata]	[more]
XP_023532183.1	0.0e+00	89.48	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita pepo subsp...	[more]
XP_023532184.1	0.0e+00	89.33	probable NOT transcription complex subunit VIP2 isoform X2 [Cucurbita pepo subsp...	[more]
XP_023007444.1	0.0e+00	88.72	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita maxima]	[more]
XP_022947129.1	0.0e+00	91.59	probable NOT transcription complex subunit VIP2 isoform X4 [Cucurbita moschata]	[more]

BLAST of CmoCh02G008440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07705.2	3.9e-234	69.55	NOT2 / NOT3 / NOT5 family	[more]
AT1G07705.1	6.0e-211	69.39	NOT2 / NOT3 / NOT5 family	[more]
AT5G59710.1	1.0e-194	58.48	VIRE2 interacting protein 2	[more]
AT5G18230.1	2.1e-06	30.93	transcription regulator NOT2/NOT3/NOT5 family protein	[more]
AT5G18230.2	2.1e-06	30.93	transcription regulator NOT2/NOT3/NOT5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038635	CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily	GENE3D	2.30.30.1020		coord: 456..642 e-value: 9.3E-59 score: 200.1
IPR007282	NOT2/NOT3/NOT5, C-terminal	PFAM	PF04153	NOT2_3_5	coord: 505..618 e-value: 1.2E-27 score: 96.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..418
None	No IPR available	PANTHER	PTHR23326:SF15	NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED	coord: 2..122 coord: 120..622
IPR040168	Not2/Not3/Not5	PANTHER	PTHR23326	CCR4 NOT-RELATED	coord: 2..122 coord: 120..622

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G008440.1	CmoCh02G008440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0030015	CCR4-NOT core complex