CmoCh02G007780 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G007780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein plastid transcriptionally active 16, chloroplastic
Location	Cmo_Chr02: 4838010 .. 4841458 (-)
RNA-Seq Expression	CmoCh02G007780
Synteny	CmoCh02G007780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACTGGTTTTGAGGATGTGGGGGCTGTTTGTGTAAGACTTCAATCCAATTCTCAGTCATGGATATGAGAAAAACCTGAAGAAGAGTGGAGACCACAAACTAACCACCGTTCCTTCTCTGTAGTCTCCTTGTTCCAATGGCGGCGATCATAAACTCCAATTCGTTTATCTTAACCACAGCCCCAAACGCCCGCCGTAGCTTTGACAACAACAGCCGTAGGCAGTTTTCCGTCTACGCCAAGAGTTCTGGAACATTCGCTTCGTTTCGCTTGGGGAAATCGAGCAATGGATCGCCATCGTCCGATGGCGCTCCGGCTGAAGATTCCGGTAATTCGAATCCGTTTCGTTTCAACTTCGGAAAGATACCGGATGTGAAGTCTCTGATTCCGGTTGTTAGTGATACTTCGTCTGGTTTGTCATTCGGAAACGCGAGGCGGAAGGATCCTAATACGGTGTTTGTCGCTGGCGCTTCTGGTCAGGCTGGCATTCGATTGGCGCAGACGCTGTTGCGTGAAGGTTTTAGTGTCCGTGCTGGTGTGCCGGAGCTTGATGCTGCTCAAGAATTGGCTCGTCTTGCTGCCAAGTATAAGGTTAGTTCAGAACGAATTTTGTATCTGAGAACGGACGATATGAGGATTTGAACGACATGTGGATTTCGTTGTTTTCTGAATTGATAATTTTACTCTCGCATCTAATCGTTTAGTGTAAGGTCAGAATGAATTTTGTATGTGAGAGTGGAAGATGTGAGAATGTCATTGTGTTCTGAATTGATAATTCTGCTCTCGAATCTTGTTCTCAAGTATAATTAGGTCAGATTGGATTTTGTATTTGAGATTGGAAGTTCTAAGGATTCGTTGTTTTCTGAATTGATAATTCTACTCTGCATCTGGTTCAGTTATTGATTTTGACGATAACATTGTGCATTTTATTAATCGAACAATGAAGGTCATATCTAATGAAGAATCGAAGCGATTAAACGCAGTCGAATCCTCCTTTCAAGATGCCGAATCGATAGCCAAGGCGATCGGAAACGCCAGTAAAGTTGTAGTCACTATTGGCGCTGGAGAAAACGGTCCGACCTCCGAAGTTACCACATCGGACGCATTGCAAGTAATTCAGGCAGCACAGCTCGCCGGAGTAGGCCATGTGGCCATCGTCTACGATGGCAACGCATCAAACTCCTCCACAAACAATGTACTCGACGGCCTTTCGTCATTCTTCAACAACCTGTTCTCCCGATCTCAGGAGTTGTCCGTAGTGGAGCTCTTGCAGAAAATAGTTGAAACCGATGTCAGCTATACGTTCATCAAGGCAAATTTGGTAGAAGACTTTGAGCCTGAACGGGCCTATAATGTCGTCGTCAGAGCAGAAGGAAGCGCTAGTTCAAACGACTACAAAGTAATGTAATGTATGACATAATTGTCAAATAGTGTTGAACAGCTCTTTCCCTTTCTCTGTTCTTGAGAAGGATCATGCTTCCTAATTTTGACTTCAAAATTACTTTCAGGTGGCCAAGTCACGGATAGCATCGCTGGTGGCCGGCGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTACCTTGCATTTTACTGCACTCACAATTTTTAAGCATAGCCATTGCTTAAATTATTGATTCAGCATTTTACTTCTGATCCTTAAGGTTGTGGAAGTTTATTCTACTCCATCAGCACTCTCAAGTTCAGTAGAGCAACTTTTCAGGTAAGTTCTTTTCTTTTCTCCCCTTTTTGCATCATGTTTCTTTAACAATTATTATTGTTCATATACACCATCTCATATCTTTACAAAATTAAATCTCACATGATGTTGATGATATTTTTTTTTCATTTCTTTGTTTCGAATCTTTATTATCTCTATCAGGTTGAGTCTCAAATTTTATTAGTTTAAGTTTTTGGATTTTAACACTATTGAATCTATAATTTTGAAATGATAAACGTTAAATTTACGTTTAGTTCTAAACTTTTTATTTGTTGAGTTAATTTTTAAACTAGGGTAATTCGTTTTTATATTTTTTTTTATTATAGGTAATAGAACCCAAAACTTTAAAAATGTCTAATAAGTACATAACTTATGTGTTAAATATTTTATATACGGATAATGTTAAAAGAAAACTATATGATTTAATAGATACACAATTAAATTTTATACTTTTAATTTTGTATTTAAGAGACGATAATTAAAAAAAAACTATTAAATATAAAATCAAAAAATTGACACAAAAATAAAAATTCAAAATTTAAGACTAACAAACACACGTTTAAAAGTTAGAAAGTTAGAAGATTAATATATATATATATATATATATATATTAATTTTAGGAACCAAATTAAGACAAATTTGAATTCTATGAACTAAATTTGTGATCTTAGTCTTTCTAAAACCGAGAATTGTGTGTTGAAGATTCTATGGTTTCATAAAGCATTGTGATTAGAAGATTGATTGTTTTGGTATAAATTGGTATCAGCGCCATTCCCACGGATGGGAGAAGACAGGCTTATGCTGAAGCACAGGCCAAGGCAAAAGCAGAGGAAGAAGCCATAAGAACTGCAGAGAAAGCTCGTGAAGAGGCAGAGGCCGCAAAGAAACAACAACTTGAGGCTGCCAAAGCTGAAAAGACAGCCCAAGCTGCTGCTGCTGCTGCTGTTGCCGAAGAATCCCAGAAGCAAGAATCTGATGAAGTAGCCTTCTTCAACACCTTATTGAACAAAGCCAAGGATTTCAGTTCAGAGCAATCCCAAAAGCTCAAAAAGCTCTCAGAAAAAGAACCCAAGGCACCCACTAAACCCAAAGCCGAAGAGGCGCCAGAGAAGGTCGACAGTGCAGCAGGCAGTTTAGTCAACAACTTTTTAAGCAAAGCCAAGGGCTTCGGCTCGCAGCAGCCATGGGATAAACTAGCTTTTCAACTACCAAAACAACCTGAGGAATCAAATGTTCAGATAGCCACAGTGAGAGGACAGGCTAAGGCTCGATCTCTGCCATCAAAGAAAGCAGCCGTGAGACAAGCAATGACCAATTCCAAGCCCTCGTTTGCAGCCAAATCAAAAGAAAACTCAAAGCCTAAAGCCAAAGAGGAGGCAAAAGCAGAGGTAAGGAAGGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTTGATGATGATTAGGAAGAAGAAAATTATATTATTGATTGTTTCTGACTTTTATGGCTGATGATAGAACTCTTTGAAGAGCTTATTTTTATTTGTGTATGTATTTCCATTGTAATCTATGCATGTATCTGTTTCACGAGGGTTGGTTACCTGATTTTACGAGTTTCAGCAAAGAATATGTGAGCCTGTCGTGTGATTGTAACATTCTATTGTTTTTCCTATAATTGTGAACGCAATTATCCAACTCTTGTAAATGGGTCTCTACTCAAATTAATTTAATAGGGTTTATGCTTTTTATGA

mRNA sequence

TACTGGTTTTGAGGATGTGGGGGCTGTTTGTGTAAGACTTCAATCCAATTCTCAGTCATGGATATGAGAAAAACCTGAAGAAGAGTGGAGACCACAAACTAACCACCGTTCCTTCTCTGTAGTCTCCTTGTTCCAATGGCGGCGATCATAAACTCCAATTCGTTTATCTTAACCACAGCCCCAAACGCCCGCCGTAGCTTTGACAACAACAGCCGTAGGCAGTTTTCCGTCTACGCCAAGAGTTCTGGAACATTCGCTTCGTTTCGCTTGGGGAAATCGAGCAATGGATCGCCATCGTCCGATGGCGCTCCGGCTGAAGATTCCGGTAATTCGAATCCGTTTCGTTTCAACTTCGGAAAGATACCGGATGTGAAGTCTCTGATTCCGGTTGTTAGTGATACTTCGTCTGGTTTGTCATTCGGAAACGCGAGGCGGAAGGATCCTAATACGGTGTTTGTCGCTGGCGCTTCTGGTCAGGCTGGCATTCGATTGGCGCAGACGCTGTTGCGTGAAGGTTTTAGTGTCCGTGCTGGTGTGCCGGAGCTTGATGCTGCTCAAGAATTGGCTCGTCTTGCTGCCAAGTATAAGGTCATATCTAATGAAGAATCGAAGCGATTAAACGCAGTCGAATCCTCCTTTCAAGATGCCGAATCGATAGCCAAGGCGATCGGAAACGCCAGTAAAGTTGTAGTCACTATTGGCGCTGGAGAAAACGGTCCGACCTCCGAAGTTACCACATCGGACGCATTGCAAGTAATTCAGGCAGCACAGCTCGCCGGAGTAGGCCATGTGGCCATCGTCTACGATGGCAACGCATCAAACTCCTCCACAAACAATGTACTCGACGGCCTTTCGTCATTCTTCAACAACCTGTTCTCCCGATCTCAGGAGTTGTCCGTAGTGGAGCTCTTGCAGAAAATAGTTGAAACCGATGTCAGCTATACGTTCATCAAGGCAAATTTGGTAGAAGACTTTGAGCCTGAACGGGCCTATAATGTCGTCGTCAGAGCAGAAGGAAGCGCTAGTTCAAACGACTACAAAGTGGCCAAGTCACGGATAGCATCGCTGGTGGCCGGCGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTTGTGGAAGTTTATTCTACTCCATCAGCACTCTCAAGTTCAGTAGAGCAACTTTTCAGCGCCATTCCCACGGATGGGAGAAGACAGGCTTATGCTGAAGCACAGGCCAAGGCAAAAGCAGAGGAAGAAGCCATAAGAACTGCAGAGAAAGCTCGTGAAGAGGCAGAGGCCGCAAAGAAACAACAACTTGAGGCTGCCAAAGCTGAAAAGACAGCCCAAGCTGCTGCTGCTGCTGCTGTTGCCGAAGAATCCCAGAAGCAAGAATCTGATGAAGTAGCCTTCTTCAACACCTTATTGAACAAAGCCAAGGATTTCAGTTCAGAGCAATCCCAAAAGCTCAAAAAGCTCTCAGAAAAAGAACCCAAGGCACCCACTAAACCCAAAGCCGAAGAGGCGCCAGAGAAGGTCGACAGTGCAGCAGGCAGTTTAGTCAACAACTTTTTAAGCAAAGCCAAGGGCTTCGGCTCGCAGCAGCCATGGGATAAACTAGCTTTTCAACTACCAAAACAACCTGAGGAATCAAATGTTCAGATAGCCACAGTGAGAGGACAGGCTAAGGCTCGATCTCTGCCATCAAAGAAAGCAGCCGTGAGACAAGCAATGACCAATTCCAAGCCCTCGTTTGCAGCCAAATCAAAAGAAAACTCAAAGCCTAAAGCCAAAGAGGAGGCAAAAGCAGAGGTAAGGAAGGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTTGATGATGATTAGGAAGAAGAAAATTATATTATTGATTGTTTCTGACTTTTATGGCTGATGATAGAACTCTTTGAAGAGCTTATTTTTATTTGTGTATGTATTTCCATTGTAATCTATGCATGTATCTGTTTCACGAGGGTTGGTTACCTGATTTTACGAGTTTCAGCAAAGAATATGTGAGCCTGTCGTGTGATTGTAACATTCTATTGTTTTTCCTATAATTGTGAACGCAATTATCCAACTCTTGTAAATGGGTCTCTACTCAAATTAATTTAATAGGGTTTATGCTTTTTATGA

Coding sequence (CDS)

ATGGCGGCGATCATAAACTCCAATTCGTTTATCTTAACCACAGCCCCAAACGCCCGCCGTAGCTTTGACAACAACAGCCGTAGGCAGTTTTCCGTCTACGCCAAGAGTTCTGGAACATTCGCTTCGTTTCGCTTGGGGAAATCGAGCAATGGATCGCCATCGTCCGATGGCGCTCCGGCTGAAGATTCCGGTAATTCGAATCCGTTTCGTTTCAACTTCGGAAAGATACCGGATGTGAAGTCTCTGATTCCGGTTGTTAGTGATACTTCGTCTGGTTTGTCATTCGGAAACGCGAGGCGGAAGGATCCTAATACGGTGTTTGTCGCTGGCGCTTCTGGTCAGGCTGGCATTCGATTGGCGCAGACGCTGTTGCGTGAAGGTTTTAGTGTCCGTGCTGGTGTGCCGGAGCTTGATGCTGCTCAAGAATTGGCTCGTCTTGCTGCCAAGTATAAGGTCATATCTAATGAAGAATCGAAGCGATTAAACGCAGTCGAATCCTCCTTTCAAGATGCCGAATCGATAGCCAAGGCGATCGGAAACGCCAGTAAAGTTGTAGTCACTATTGGCGCTGGAGAAAACGGTCCGACCTCCGAAGTTACCACATCGGACGCATTGCAAGTAATTCAGGCAGCACAGCTCGCCGGAGTAGGCCATGTGGCCATCGTCTACGATGGCAACGCATCAAACTCCTCCACAAACAATGTACTCGACGGCCTTTCGTCATTCTTCAACAACCTGTTCTCCCGATCTCAGGAGTTGTCCGTAGTGGAGCTCTTGCAGAAAATAGTTGAAACCGATGTCAGCTATACGTTCATCAAGGCAAATTTGGTAGAAGACTTTGAGCCTGAACGGGCCTATAATGTCGTCGTCAGAGCAGAAGGAAGCGCTAGTTCAAACGACTACAAAGTGGCCAAGTCACGGATAGCATCGCTGGTGGCCGGCGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTTGTGGAAGTTTATTCTACTCCATCAGCACTCTCAAGTTCAGTAGAGCAACTTTTCAGCGCCATTCCCACGGATGGGAGAAGACAGGCTTATGCTGAAGCACAGGCCAAGGCAAAAGCAGAGGAAGAAGCCATAAGAACTGCAGAGAAAGCTCGTGAAGAGGCAGAGGCCGCAAAGAAACAACAACTTGAGGCTGCCAAAGCTGAAAAGACAGCCCAAGCTGCTGCTGCTGCTGCTGTTGCCGAAGAATCCCAGAAGCAAGAATCTGATGAAGTAGCCTTCTTCAACACCTTATTGAACAAAGCCAAGGATTTCAGTTCAGAGCAATCCCAAAAGCTCAAAAAGCTCTCAGAAAAAGAACCCAAGGCACCCACTAAACCCAAAGCCGAAGAGGCGCCAGAGAAGGTCGACAGTGCAGCAGGCAGTTTAGTCAACAACTTTTTAAGCAAAGCCAAGGGCTTCGGCTCGCAGCAGCCATGGGATAAACTAGCTTTTCAACTACCAAAACAACCTGAGGAATCAAATGTTCAGATAGCCACAGTGAGAGGACAGGCTAAGGCTCGATCTCTGCCATCAAAGAAAGCAGCCGTGAGACAAGCAATGACCAATTCCAAGCCCTCGTTTGCAGCCAAATCAAAAGAAAACTCAAAGCCTAAAGCCAAAGAGGAGGCAAAAGCAGAGGTAAGGAAGGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTTGATGATGATTAG

Protein sequence

MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPAEDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLAQTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGNASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLSSFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSNDYKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQAKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFGSQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKENSKPKAKEEAKAEVRKVFGGLFKQETIYVDDD

Homology

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BLAST of CmoCh02G007780 vs. ExPASy Swiss-Prot
Match: Q9STF2 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC16 PE=1 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 5.6e-133
Identity = 311/576 (53.99%), Postives = 394/576 (68.40%), Query Frame = 0


Query: 6   NSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPAEDSGN 65
           +S SF LTTAP     F N  + + +V+AK +    +F+LGK + G   S+G        
Sbjct: 4   SSTSFPLTTAPPQGVRF-NRRKPRLTVWAKQT----AFQLGK-TKGDDDSEG----KQKG 63

Query: 66  SNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLAQTLLR 125
            NPF+F+FGK+PD+KSLIPVV++ S+GL FGN R+KDP T+FVAGA+GQAGIR+AQTLL+
Sbjct: 64  KNPFQFDFGKLPDMKSLIPVVTNPSTGLVFGNNRKKDPGTIFVAGATGQAGIRIAQTLLQ 123

Query: 126 EGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGNASKVV 185
            GFSVRAGVP+L AAQ+LAR+AA YK++SN+E KRLNAV+S FQDAESIAKAIGNA+KVV
Sbjct: 124 RGFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQSPFQDAESIAKAIGNATKVV 183

Query: 186 VTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLSSFFNN 245
           VT+GA ENGP ++V+TSDAL V+QAA+LAGV HVAIVYDG  S  ST NVLDG++SFF N
Sbjct: 184 VTVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTIS-GSTYNVLDGITSFFGN 243

Query: 246 LFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAE------GSASSN 305
           LF++SQ L++ +L++K+ +TDV+YT IK +L EDF PE+AYNVVV AE      GS+SS 
Sbjct: 244 LFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNVVVSAEGSNSGSGSSSSE 303

Query: 306 DYKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEA 365
            YKV K +IASLVA +F+NTAVAENKVVEV + PSA S  V++LFS IP DGRR+ YA+A
Sbjct: 304 AYKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPEDGRRKVYADA 363

Query: 366 QAKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAF 425
            A+ +AEEEA   A+KARE AEAAK                                   
Sbjct: 364 IARERAEEEAKVAADKAREAAEAAK----------------------------------- 423

Query: 426 FNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGF 485
                        E  ++++KLSEKE +A +   AE+A +K D A G  V+   +KAK  
Sbjct: 424 -------------EFEKQMQKLSEKEAEAAS--LAEDAQQKAD-AVGVTVDGLFNKAKDI 483

Query: 486 GSQQPWDKLAFQ----LPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAA 545
            S   W+KL  Q    +    E   VQ+ATVRGQAKAR+LP KKA V+Q  ++    FA+
Sbjct: 484 SSGLSWNKLGSQFATAIQNASETPKVQVATVRGQAKARNLPPKKAVVKQRPSS---PFAS 510

Query: 546 KSKENSKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           K KE  +PK  E+   EVRKVFGGLFKQETIY+DDD
Sbjct: 544 KPKE-ERPKKPEK---EVRKVFGGLFKQETIYIDDD 510

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BLAST of CmoCh02G007780 vs. ExPASy Swiss-Prot
Match: Q8H0U5 (Protein TIC 62, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC62 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 3.8e-04
Identity = 89/355 (25.07%), Postives = 156/355 (43.94%), Query Frame = 0


Query: 97  NARRKDPNTVFVAGASGQAGIRLAQTLLREGFSVRAGVPELDAAQELARLAAKYKVISNE 156
           N   K+ + VFVAGA+G+ G R  + LL+ GF VRAGV     A  L +   + K+ + +
Sbjct: 75  NLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTD 134

Query: 157 ES----KRLNAVESSFQDAESIAKAIGNASKVVVTIGAGENGPTSEVTTSDALQVIQAAQ 216
           E     ++L  VE   +  +SI  A+GNAS ++  IGA E    S++T    +  +    
Sbjct: 135 EGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEK-EISDITGPYRIDYLATKN 194

Query: 217 LAGVGHVAIVYDGNASNSSTNNVLDGLSSFFNNLF------SRSQELSVVELLQKIVETD 276
           L      A V +     S   N   G  +   NLF       R  E       + ++E+ 
Sbjct: 195 LVDAATSAKVNNFILVTSLGTNKF-GFPAAILNLFWGVLCWKRKAE-------EALIESG 254

Query: 277 VSYTFIKANLVEDFEPERAY----NVVVRAEGSASSNDYKVAKSRIASLVAGVFSNTAVA 336
           ++Y  ++   +E   P  AY    N+ +  + +      +V+  ++A L+A +  N  ++
Sbjct: 255 LNYAIVRPGGME--RPTDAYKETHNLTLALDDTLFGG--QVSNLQVAELLACMAKNPQLS 314

Query: 337 ENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQAKAKAEEEAIRTAEKAREEAEA 396
            +K+VEV +  +A  + +E+L   IP+   ++ Y      + A +E      K   +   
Sbjct: 315 FSKIVEVVAETTAPLTPIEKLLEKIPS---KRPYVPPPKASVATKEVKPVPTKPVTQEPT 374

Query: 397 AKKQQLEAAKAEKTAQAAAAAAVAE-ESQKQESDEVAFFNTLLNKAKDFSSEQSQ 437
           A K+  EA   EK  +    +  A  E  K  +  +    T ++ AK    + +Q
Sbjct: 375 APKED-EAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQ 412

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BLAST of CmoCh02G007780 vs. ExPASy TrEMBL
Match: A0A6J1G4Z0 (protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450967 PE=4 SV=1)

HSP 1 Score: 1016.9 bits (2628), Expect = 3.3e-293
Identity = 571/571 (100.00%), Postives = 571/571 (100.00%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120
           EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA
Sbjct: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180
           QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240

Query: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300
           SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND
Sbjct: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300

Query: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360
           YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF 420
           AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF
Sbjct: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF 420

Query: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG 480
           NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG
Sbjct: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG 480

Query: 481 SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540
           SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN
Sbjct: 481 SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540

Query: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 571

[Close]

BLAST of CmoCh02G007780 vs. ExPASy TrEMBL
Match: A0A6J1KZG1 (protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499653 PE=4 SV=1)

HSP 1 Score: 981.1 bits (2535), Expect = 2.0e-282
Identity = 553/571 (96.85%), Postives = 560/571 (98.07%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120
           EDSGNSNP+RFNFGKIPDVKSLIPVVS+TSSGLSFGN+RRKDPNTVFVAGASGQAGIRLA
Sbjct: 61  EDSGNSNPYRFNFGKIPDVKSLIPVVSETSSGLSFGNSRRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180
           QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDG+S
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGIS 240

Query: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300
           SFFNNLFSRSQ LSVVELLQKIVETD+SYTFIKANL EDFEPERAYNVVV AEGSASSND
Sbjct: 241 SFFNNLFSRSQALSVVELLQKIVETDLSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360
           YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSA SSSVEQLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF 420
           AKAKAEEEAIRTAE+AREEAEAAKKQQLEAAKAEKTAQ   AAAVAEESQKQESDEVAFF
Sbjct: 361 AKAKAEEEAIRTAEQAREEAEAAKKQQLEAAKAEKTAQ---AAAVAEESQKQESDEVAFF 420

Query: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG 480
           NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEK DSAAGSLVNNFLSKAKGFG
Sbjct: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKADSAAGSLVNNFLSKAKGFG 480

Query: 481 SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540
            QQPW+KLAFQLPKQ EESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN
Sbjct: 481 LQQPWEKLAFQLPKQSEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540

Query: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           SKPK KEEAKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 SKPKPKEEAKAEVRKVFGGLFKQETIYVDDD 568

[Close]

BLAST of CmoCh02G007780 vs. ExPASy TrEMBL
Match: A0A6J1D3Q1 (protein plastid transcriptionally active 16, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017020 PE=4 SV=1)

HSP 1 Score: 813.5 bits (2100), Expect = 5.5e-232
Identity = 475/576 (82.47%), Postives = 513/576 (89.06%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAII SNSFILTTAPN RRSF ++ RRQF+VYA+ SGTF S RLGKSSNGSPSSD AP 
Sbjct: 1   MAAIITSNSFILTTAPNTRRSFKSH-RRQFAVYARRSGTFGSLRLGKSSNGSPSSDDAPP 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSD-TSSGLSFGNARRKDPNTVFVAGASGQAGIRL 120
           E+SGNSNPFRFNFGK+PD+KSLIPVVS+ +SSGLSFGNARRKDPNTVFVAGA+GQAGIRL
Sbjct: 61  EESGNSNPFRFNFGKVPDMKSLIPVVSNPSSSGLSFGNARRKDPNTVFVAGATGQAGIRL 120

Query: 121 AQTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIG 180
           AQTLLREGFSVRAGVPELDAAQELARLAAKY VISNEESKRLNAVES+FQDAESIAKAIG
Sbjct: 121 AQTLLREGFSVRAGVPELDAAQELARLAAKYMVISNEESKRLNAVESTFQDAESIAKAIG 180

Query: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGL 240
           NA KVVVTIGA ENGPTSEVTTSDALQVIQAAQLAGV HVAIVYDG+A NSST NVLDGL
Sbjct: 181 NAGKVVVTIGAAENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGSALNSSTYNVLDGL 240

Query: 241 SSFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSN 300
           SSFFNNLFSRSQ+LSV ELLQKIVETDV YTFIK NLVEDF PER YNVVV AEGSASSN
Sbjct: 241 SSFFNNLFSRSQQLSVSELLQKIVETDVGYTFIKTNLVEDFAPERTYNVVVGAEGSASSN 300

Query: 301 DYKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEA 360
           DYKVAKS+IASLVAGVFSNTAVAENKVVEVYS+PSA SSSVEQLFSAIP DGRR+AYAEA
Sbjct: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVEQLFSAIPKDGRREAYAEA 360

Query: 361 QAKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAF 420
           QAKAKAEEEAIR AEKAR+EAEAAKK++ + AK   + +AA A++    +  +ESD++AF
Sbjct: 361 QAKAKAEEEAIRAAEKARQEAEAAKKKEEQVAK-RLSEKAAKASSPPPAAAAEESDQIAF 420

Query: 421 FNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGF 480
           FNT LNKAKDFSSEQSQKLKKL+EKEP+AP+K KAEE  E    +AGS VNNF SKAK  
Sbjct: 421 FNTFLNKAKDFSSEQSQKLKKLTEKEPQAPSKAKAEEEAE----SAGSFVNNFFSKAKDL 480

Query: 481 GSQQPWDKLAFQLPKQP-EESNVQIATVRGQAKARSLPSKKAAVRQAMT--NSKPSFAAK 540
           GS QPW+KLAFQL K P EESNVQ+ATVRGQAKAR+LPSKKAAVRQ  T  NSKP FA K
Sbjct: 481 GSAQPWEKLAFQLQKPPSEESNVQVATVRGQAKARALPSKKAAVRQPQTNSNSKPPFAVK 540

Query: 541 SKENSKPKAKEE-AKAEVRKVFGGLFKQETIYVDDD 572
           +KENSKPK KEE +KAEVRKVFGGLF QET+YVDDD
Sbjct: 541 AKENSKPKGKEEGSKAEVRKVFGGLFSQETLYVDDD 570

[Close]

BLAST of CmoCh02G007780 vs. ExPASy TrEMBL
Match: A0A0A0KC77 (NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G188160 PE=4 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 1.9e-229
Identity = 465/588 (79.08%), Postives = 510/588 (86.73%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAIINSNSFILTT PN RRSF ++ RRQ +V+AK+SG+F+SFRLGKSSN SPSSD AP 
Sbjct: 1   MAAIINSNSFILTTTPNTRRSFKSH-RRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPV 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120
           EDSGNSNPFRF+FGK+PDVKSLIPVVS+ SSGLSFG++RRKD NTVFVAGA+GQAGIRLA
Sbjct: 61  EDSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240
           ASKVVVTIG GENGPTSEVTTSDALQVIQAAQLAGV HVA+VYDGNAS+SST NVLDGLS
Sbjct: 181 ASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLS 240

Query: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300
           SFFNNLFSRSQ LSVVELLQKIVETD+ YTFIK NLVEDF PERAYNVVV+AEGSASSND
Sbjct: 241 SFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSND 300

Query: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360
           YKVA+S+IASLVAGVFSNTAVAENKVVEVYS+PSA SSSV+QLFS IPTDGRRQAYAEA+
Sbjct: 301 YKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYAEAK 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQK--------Q 420
           AKAKAEEEAIR AE AREEAEA KKQ++EAAK+++ ++ AA    +  S          +
Sbjct: 361 AKAKAEEEAIRIAENAREEAEATKKQEVEAAKSKRLSEKAATQPSSSSSSSSSSSSPPAE 420

Query: 421 ESDEVAFFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNF 480
           ESD++AFFN+ LNKAKDFSSEQSQKLKKLSEKEP        +E  E+    AG+LVNNF
Sbjct: 421 ESDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEP--------QETEEESPDTAGNLVNNF 480

Query: 481 LSKAKGFGSQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAM-TNSKP 540
            +KAKGFGS QPW+KL+FQL K  EESN QIATVRGQAKAR+LP KKA++RQ   TNSKP
Sbjct: 481 FNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKP 540

Query: 541 SFAAKSKENSKPK--------AKEEAKAEVRKVFGGLFKQETIYVDDD 572
           SF  K KENSKPK        AKEE KAEVRKVFGGLFKQETIYVDD+
Sbjct: 541 SFGLKQKENSKPKAAATAAAAAKEETKAEVRKVFGGLFKQETIYVDDE 579

[Close]

BLAST of CmoCh02G007780 vs. ExPASy TrEMBL
Match: A0A5D3CYY3 (Protein plastid transcriptionally active 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00290 PE=4 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 6.9e-227
Identity = 465/592 (78.55%), Postives = 505/592 (85.30%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSP-SSDGAP 60
           MAAIINSNSFILTT PNARRSF  + RRQF+V+AK+SG+F+SFRLGKSSN SP SSD  P
Sbjct: 1   MAAIINSNSFILTTTPNARRSFKTHDRRQFAVHAKNSGSFSSFRLGKSSNESPSSSDDPP 60

Query: 61  AEDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRL 120
            EDSGNSNPFRF FGK+PDVKSLIPVVS+ SSGLSFGN+RRKD NTVFVAGA+GQAGIRL
Sbjct: 61  LEDSGNSNPFRFPFGKVPDVKSLIPVVSEPSSGLSFGNSRRKDSNTVFVAGATGQAGIRL 120

Query: 121 AQTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIG 180
           AQTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIG
Sbjct: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180

Query: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGL 240
           NASKVVVTIGAGENGPTSEVTTSDALQVIQAA+LAGV HVA+VYDGN S+SST NVLDGL
Sbjct: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAELAGVSHVAVVYDGNTSSSSTYNVLDGL 240

Query: 241 SSFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSN 300
           SSFFNNLFSRSQ LSVVELLQKI ETD+ YTFIK NLVEDF PERAYNVVV+AEGSASSN
Sbjct: 241 SSFFNNLFSRSQPLSVVELLQKIAETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300

Query: 301 DYKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEA 360
           DYKVAKS+IASLVAGVFSNTAVAENKVVEVYS+PSA SSSV+QLFS IPTDGRRQAYAE 
Sbjct: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSASSSSVDQLFSVIPTDGRRQAYAE- 360

Query: 361 QAKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQK-------- 420
            AKAKAEEEA+R AEKAREEAEA KKQ++EAAK+++ ++ AA    +  S          
Sbjct: 361 -AKAKAEEEAMRIAEKAREEAEATKKQEVEAAKSKRPSEKAATQPSSSSSSSSSFSSSPP 420

Query: 421 -----QESDEVAFFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAG 480
                QESD++AFFN+ LNKAKDFSSEQS KLKKLSEKEP        +E  E+    A 
Sbjct: 421 PPPLAQESDQIAFFNSFLNKAKDFSSEQSLKLKKLSEKEP--------QETEEESPDTAA 480

Query: 481 SLVNNFLSKAKGFGSQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAM 540
           +LVNNF +KAKGFGS QPW+KL+FQL K  EESN QIATVRGQAKAR+LP KKA++RQ  
Sbjct: 481 NLVNNFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQ 540

Query: 541 -TNSKPSFAAKSKENSKPK------AKEEAKAEVRKVFGGLFKQETIYVDDD 572
            TNSKPSF  K KENSKPK      AKEE KAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 KTNSKPSFGLKQKENSKPKAAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 582

[Close]

BLAST of CmoCh02G007780 vs. NCBI nr
Match: XP_022946936.1 (protein plastid transcriptionally active 16, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1016.9 bits (2628), Expect = 6.7e-293
Identity = 571/571 (100.00%), Postives = 571/571 (100.00%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120
           EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA
Sbjct: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180
           QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240

Query: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300
           SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND
Sbjct: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300

Query: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360
           YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF 420
           AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF
Sbjct: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF 420

Query: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG 480
           NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG
Sbjct: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG 480

Query: 481 SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540
           SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN
Sbjct: 481 SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540

Query: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 571

[Close]

BLAST of CmoCh02G007780 vs. NCBI nr
Match: KAG7035386.1 (Protein plastid transcriptionally active 16, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 993.4 bits (2567), Expect = 8.0e-286
Identity = 561/571 (98.25%), Postives = 563/571 (98.60%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120
           EDSGNSNPFRF+FGKIPDVKSLIPVVSDTSSGLSFGNAR KDPNTVFVAGASGQAGIRLA
Sbjct: 61  EDSGNSNPFRFDFGKIPDVKSLIPVVSDTSSGLSFGNARGKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180
           QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240

Query: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300
           SFFNNLFSRSQ LSVVELLQKIVETDVSYTFIKANL EDFEPERAYNVVV AEGSASSND
Sbjct: 241 SFFNNLFSRSQALSVVELLQKIVETDVSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360
           YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSA SSSVEQLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF 420
           AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQ  AAAAVAEESQKQESDEVAFF
Sbjct: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQ--AAAAVAEESQKQESDEVAFF 420

Query: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG 480
           NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEK DSAAGSLVNNFLSKAKGFG
Sbjct: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKADSAAGSLVNNFLSKAKGFG 480

Query: 481 SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540
           SQQPWDKLAFQ+PKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN
Sbjct: 481 SQQPWDKLAFQIPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540

Query: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 569

[Close]

BLAST of CmoCh02G007780 vs. NCBI nr
Match: KAG6605438.1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 991.9 bits (2563), Expect = 2.3e-285
Identity = 560/569 (98.42%), Postives = 561/569 (98.59%), Query Frame = 0


Query: 3   AIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPAED 62
           AIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPAED
Sbjct: 2   AIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPAED 61

Query: 63  SGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLAQT 122
           SGNSNPFRF+FGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLAQT
Sbjct: 62  SGNSNPFRFDFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLAQT 121

Query: 123 LLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGNAS 182
           LLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGNAS
Sbjct: 122 LLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGNAS 181

Query: 183 KVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLSSF 242
           KVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLSSF
Sbjct: 182 KVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLSSF 241

Query: 243 FNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSNDYK 302
           FNNLFSRSQ LSVVELLQKIVETDVSYTFIKANL EDFEPERAYNVVV AEGSASSNDYK
Sbjct: 242 FNNLFSRSQALSVVELLQKIVETDVSYTFIKANLAEDFEPERAYNVVVGAEGSASSNDYK 301

Query: 303 VAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQAK 362
           VAKSRIASLVAGVFSNTAVAENKVVEVYSTPSA SSSVEQLFSAIPTDGRRQAYAEAQAK
Sbjct: 302 VAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQAK 361

Query: 363 AKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFFNT 422
           AKAEEEAIRTAEK REEAEAAKKQQLEAAKAEKTAQ  AAAAVAEESQKQESDEVAFFNT
Sbjct: 362 AKAEEEAIRTAEKGREEAEAAKKQQLEAAKAEKTAQ--AAAAVAEESQKQESDEVAFFNT 421

Query: 423 LLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFGSQ 482
           LLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEK DSAAGSLVNNFLSKAKGFGSQ
Sbjct: 422 LLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKTDSAAGSLVNNFLSKAKGFGSQ 481

Query: 483 QPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKENSK 542
           QPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKENSK
Sbjct: 482 QPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKENSK 541

Query: 543 PKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           PKAKEEAKAEVRKVFGGLFKQETIYVDDD
Sbjct: 542 PKAKEEAKAEVRKVFGGLFKQETIYVDDD 568

[Close]

BLAST of CmoCh02G007780 vs. NCBI nr
Match: XP_023532201.1 (protein plastid transcriptionally active 16, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 991.1 bits (2561), Expect = 3.9e-285
Identity = 561/573 (97.91%), Postives = 564/573 (98.43%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120
           EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA
Sbjct: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180
           QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNAS SSTNNVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASKSSTNNVLDGLS 240

Query: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300
           SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANL EDFEPERAYNVVV AEGSASSND
Sbjct: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360
           YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSA SSSVEQLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQ--AAAAAAVAEESQKQESDEVA 420
           AKA+AEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQ  AAAAAAV+EESQKQESDEVA
Sbjct: 361 AKAQAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAAAVSEESQKQESDEVA 420

Query: 421 FFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKG 480
           FFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEK DSAAGSLVNNFLSKAKG
Sbjct: 421 FFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKADSAAGSLVNNFLSKAKG 480

Query: 481 FGSQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSK 540
           FGSQQPW+KLAFQLPK  EESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSK
Sbjct: 481 FGSQQPWEKLAFQLPKLSEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSK 540

Query: 541 ENSKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           ENSKPKAKEEAKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 ENSKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 573

[Close]

BLAST of CmoCh02G007780 vs. NCBI nr
Match: XP_023007046.1 (protein plastid transcriptionally active 16, chloroplastic [Cucurbita maxima])

HSP 1 Score: 981.1 bits (2535), Expect = 4.1e-282
Identity = 553/571 (96.85%), Postives = 560/571 (98.07%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60
           MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120
           EDSGNSNP+RFNFGKIPDVKSLIPVVS+TSSGLSFGN+RRKDPNTVFVAGASGQAGIRLA
Sbjct: 61  EDSGNSNPYRFNFGKIPDVKSLIPVVSETSSGLSFGNSRRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180
           QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDG+S
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGIS 240

Query: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300
           SFFNNLFSRSQ LSVVELLQKIVETD+SYTFIKANL EDFEPERAYNVVV AEGSASSND
Sbjct: 241 SFFNNLFSRSQALSVVELLQKIVETDLSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360
           YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSA SSSVEQLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAFF 420
           AKAKAEEEAIRTAE+AREEAEAAKKQQLEAAKAEKTAQ   AAAVAEESQKQESDEVAFF
Sbjct: 361 AKAKAEEEAIRTAEQAREEAEAAKKQQLEAAKAEKTAQ---AAAVAEESQKQESDEVAFF 420

Query: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGFG 480
           NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEK DSAAGSLVNNFLSKAKGFG
Sbjct: 421 NTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKADSAAGSLVNNFLSKAKGFG 480

Query: 481 SQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540
            QQPW+KLAFQLPKQ EESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN
Sbjct: 481 LQQPWEKLAFQLPKQSEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAAKSKEN 540

Query: 541 SKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           SKPK KEEAKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 SKPKPKEEAKAEVRKVFGGLFKQETIYVDDD 568

[Close]

BLAST of CmoCh02G007780 vs. TAIR 10
Match: AT3G46780.1 (plastid transcriptionally active 16 )

HSP 1 Score: 476.1 bits (1224), Expect = 4.0e-134
Identity = 311/576 (53.99%), Postives = 394/576 (68.40%), Query Frame = 0


Query: 6   NSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPAEDSGN 65
           +S SF LTTAP     F N  + + +V+AK +    +F+LGK + G   S+G        
Sbjct: 4   SSTSFPLTTAPPQGVRF-NRRKPRLTVWAKQT----AFQLGK-TKGDDDSEG----KQKG 63

Query: 66  SNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLAQTLLR 125
            NPF+F+FGK+PD+KSLIPVV++ S+GL FGN R+KDP T+FVAGA+GQAGIR+AQTLL+
Sbjct: 64  KNPFQFDFGKLPDMKSLIPVVTNPSTGLVFGNNRKKDPGTIFVAGATGQAGIRIAQTLLQ 123

Query: 126 EGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGNASKVV 185
            GFSVRAGVP+L AAQ+LAR+AA YK++SN+E KRLNAV+S FQDAESIAKAIGNA+KVV
Sbjct: 124 RGFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQSPFQDAESIAKAIGNATKVV 183

Query: 186 VTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLSSFFNN 245
           VT+GA ENGP ++V+TSDAL V+QAA+LAGV HVAIVYDG  S  ST NVLDG++SFF N
Sbjct: 184 VTVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTIS-GSTYNVLDGITSFFGN 243

Query: 246 LFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAE------GSASSN 305
           LF++SQ L++ +L++K+ +TDV+YT IK +L EDF PE+AYNVVV AE      GS+SS 
Sbjct: 244 LFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNVVVSAEGSNSGSGSSSSE 303

Query: 306 DYKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEA 365
            YKV K +IASLVA +F+NTAVAENKVVEV + PSA S  V++LFS IP DGRR+ YA+A
Sbjct: 304 AYKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPEDGRRKVYADA 363

Query: 366 QAKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAAVAEESQKQESDEVAF 425
            A+ +AEEEA   A+KARE AEAAK                                   
Sbjct: 364 IARERAEEEAKVAADKAREAAEAAK----------------------------------- 423

Query: 426 FNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLSKAKGF 485
                        E  ++++KLSEKE +A +   AE+A +K D A G  V+   +KAK  
Sbjct: 424 -------------EFEKQMQKLSEKEAEAAS--LAEDAQQKAD-AVGVTVDGLFNKAKDI 483

Query: 486 GSQQPWDKLAFQ----LPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAMTNSKPSFAA 545
            S   W+KL  Q    +    E   VQ+ATVRGQAKAR+LP KKA V+Q  ++    FA+
Sbjct: 484 SSGLSWNKLGSQFATAIQNASETPKVQVATVRGQAKARNLPPKKAVVKQRPSS---PFAS 510

Query: 546 KSKENSKPKAKEEAKAEVRKVFGGLFKQETIYVDDD 572
           K KE  +PK  E+   EVRKVFGGLFKQETIY+DDD
Sbjct: 544 KPKE-ERPKKPEK---EVRKVFGGLFKQETIYIDDD 510

[Close]

BLAST of CmoCh02G007780 vs. TAIR 10
Match: AT3G18890.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 2.7e-05
Identity = 89/355 (25.07%), Postives = 156/355 (43.94%), Query Frame = 0


Query: 97  NARRKDPNTVFVAGASGQAGIRLAQTLLREGFSVRAGVPELDAAQELARLAAKYKVISNE 156
           N   K+ + VFVAGA+G+ G R  + LL+ GF VRAGV     A  L +   + K+ + +
Sbjct: 75  NLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTD 134

Query: 157 ES----KRLNAVESSFQDAESIAKAIGNASKVVVTIGAGENGPTSEVTTSDALQVIQAAQ 216
           E     ++L  VE   +  +SI  A+GNAS ++  IGA E    S++T    +  +    
Sbjct: 135 EGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEK-EISDITGPYRIDYLATKN 194

Query: 217 LAGVGHVAIVYDGNASNSSTNNVLDGLSSFFNNLF------SRSQELSVVELLQKIVETD 276
           L      A V +     S   N   G  +   NLF       R  E       + ++E+ 
Sbjct: 195 LVDAATSAKVNNFILVTSLGTNKF-GFPAAILNLFWGVLCWKRKAE-------EALIESG 254

Query: 277 VSYTFIKANLVEDFEPERAY----NVVVRAEGSASSNDYKVAKSRIASLVAGVFSNTAVA 336
           ++Y  ++   +E   P  AY    N+ +  + +      +V+  ++A L+A +  N  ++
Sbjct: 255 LNYAIVRPGGME--RPTDAYKETHNLTLALDDTLFGG--QVSNLQVAELLACMAKNPQLS 314

Query: 337 ENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQAKAKAEEEAIRTAEKAREEAEA 396
            +K+VEV +  +A  + +E+L   IP+   ++ Y      + A +E      K   +   
Sbjct: 315 FSKIVEVVAETTAPLTPIEKLLEKIPS---KRPYVPPPKASVATKEVKPVPTKPVTQEPT 374

Query: 397 AKKQQLEAAKAEKTAQAAAAAAVAE-ESQKQESDEVAFFNTLLNKAKDFSSEQSQ 437
           A K+  EA   EK  +    +  A  E  K  +  +    T ++ AK    + +Q
Sbjct: 375 APKED-EAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQ 412

[Close]

BLAST of CmoCh02G007780 vs. TAIR 10
Match: AT2G34460.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 2.3e-04
Identity = 66/253 (26.09%), Postives = 119/253 (47.04%), Query Frame = 0


Query: 106 VFVAGASGQAGIRLAQTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVE 165
           VFVAGA+GQ G R+ + LL  GF+V+AGV +++ A+            S ++   L  V 
Sbjct: 49  VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAK-----------TSFKDDPSLQIVR 108

Query: 166 SSFQDA-ESIAKAIGNASKVVVTIGAGENG----PTSEVTTSDALQVIQAAQLAGVGHVA 225
           +   +  + +A+ IG+ S+ V+       G       +V     + ++ A +  GV    
Sbjct: 109 ADVTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFV 168

Query: 226 IVYDGNASNSSTNNVLDGLSSFFNNLFSRSQELSVVELLQK---IVETDVSYTFIKANLV 285
           +V     + ++   +L+  +  F NLF     L++V  LQ    I ++ ++YT ++   +
Sbjct: 169 LVSSILVNGAAMGQILNP-AYLFLNLFG----LTLVAKLQAEKYIKKSGINYTIVRPGGL 228

Query: 286 EDFEPERAYNVVVRAEGSASSNDYKVAKSRIASLVAGVFSNTAVAEN---KVVEVYSTPS 345
           ++  P    NVV+  E +     Y+ + SR   LVA V     + E    KVVE+ +   
Sbjct: 229 KNDPP--TGNVVMEPEDTL----YEGSISR--DLVAEVAVEALLQEESSFKVVEIVARAE 277

Query: 346 ALSSSVEQLFSAI 348
           A   S + LF+++
Sbjct: 289 APKRSYKDLFASV 277

The following BLAST results are available for this feature:

BLAST of CmoCh02G007780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF2	5.6e-133	53.99	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic OS=Arabidopsis thalia...	[more]
Q8H0U5	3.8e-04	25.07	Protein TIC 62, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC62 PE=1 SV=1	[more]

BLAST of CmoCh02G007780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4Z0	3.3e-293	100.00	protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita moschata...	[more]
A0A6J1KZG1	2.0e-282	96.85	protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita maxima O...	[more]
A0A6J1D3Q1	5.5e-232	82.47	protein plastid transcriptionally active 16, chloroplastic OS=Momordica charanti...	[more]
A0A0A0KC77	1.9e-229	79.08	NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1881...	[more]
A0A5D3CYY3	6.9e-227	78.55	Protein plastid transcriptionally active 16 OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmoCh02G007780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946936.1	6.7e-293	100.00	protein plastid transcriptionally active 16, chloroplastic [Cucurbita moschata]	[more]
KAG7035386.1	8.0e-286	98.25	Protein plastid transcriptionally active 16, chloroplastic [Cucurbita argyrosper...	[more]
KAG6605438.1	2.3e-285	98.42	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic, partial [Cucurbita a...	[more]
XP_023532201.1	3.9e-285	97.91	protein plastid transcriptionally active 16, chloroplastic [Cucurbita pepo subsp...	[more]
XP_023007046.1	4.1e-282	96.85	protein plastid transcriptionally active 16, chloroplastic [Cucurbita maxima]	[more]

BLAST of CmoCh02G007780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46780.1	4.0e-134	53.99	plastid transcriptionally active 16	[more]
AT3G18890.1	2.7e-05	25.07	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G34460.1	2.3e-04	26.09	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 356..403
None	No IPR available	GENE3D	3.40.50.720		coord: 90..342 e-value: 1.4E-18 score: 69.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 521..536
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..462
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 506..549
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..388
None	No IPR available	PANTHER	PTHR47711	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC	coord: 1..437 coord: 434..571
IPR016040	NAD(P)-binding domain	PFAM	PF13460	NAD_binding_10	coord: 110..318 e-value: 3.9E-17 score: 62.7
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 104..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G007780.1	CmoCh02G007780.1	mRNA