CmoCh02G003930 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G003930
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr02: 2027396 .. 2031085 (+)
RNA-Seq ExpressionCmoCh02G003930
SyntenyCmoCh02G003930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCCTCCACCATCTCCTGGAACTCCTCGTTGCTCATTCCATCTTCCGGATACGAGATTTGTTCTGTTCCTTCACTCAATCGGACGATTTTTTTGCTTTTTTCTGTTTCTGATCGGCTCAGTTTGCTGTGCGGATTCTCTCGCTGTACCACCGCTATTTTCTCCGACTGACTCCTACGATAATGTTTGATTTCTTCAGGATTACCGATTTTCTTTATCGCGATTGAGGCGTTGCCGCTTCCGCTATCGATCTGCTTGATTCGGTACTTGATGGAGGCGTCGCCATGGACGTTTCCGCTTCCGCTTCCGCTATCGATCTGCTTGATTCGATAATCGATGGAGGCGTCGCCTTGGACGTTGCCGCTGCCGCTATCGGTCTGCTTGATTCGGTACTTGATCTCGGCGCGACGAGTTCTTTGATTCTTCTCGCTGTTTTGGATGAACTCCTCGTAAAGATCGGCAACCGAATTCTTCTTGCTCAGATCCGTACCAGAGAACTGTCCCGATTTAGCGAACAGAGTGATGACTATCGCGTTTCCGATCAGAAACACGAAGCGAGGACTAATCAAAGTCATCGACAAGCACCGGAAGTACTCTCCAGAATTCTTGAAGGCGCTCGGCAGATGGATAGATAATTTCGAGATCACGACGAGAATCAAACACAACTCGATGAACCGAAACAGGTTAGCAATTTTCCTGAGCTGTCGATACTTAAGAATCGCGTTCATCTTCTCCGTTCTTATGTCGCAGAAACCGACAGACTCCATTTCCAGAAACAACAAAATCAATCCAGTGAAAACAACAACAACAACAACAACAGAATTTACAAAGACGATCAGGTAAAATCAAATCAATGTCACTGGTAAACAAATTCCTTCTCCGTCAAATTCATCGATCCAACCCCAACAATCATCTCCAGTGGAATCACTTCCAGGAAACTGGACGGTGCTGCAAAGAAATTTGGCGATTGGAAGCATGGAAACAGAGAGAAAATCAACAAGACAAAATTTGAGGAACAAAGAAAAACAGAGTAATCTCCACTTTTTTTTTTTTTTTTTGTTCTTCCTTCTTTTTCTCTTCAACTAGTTTTATTGTTCTTTTTTCTATAAACGCTTTAGTTTCAATGTGTTTTGATAGAAGTAGGATTGGTATTTATAGTCACATAAAATTAATTTTTCCTCTTTAATTAATATATATTCCAATTACTTTATTTTCTGTCTTTAAAAAATTATGCAATTTGAAGCCTTTTGTCTAGAACACCATTTTTAAATTATTTATTAAACATTATTAATGGAATAGAATAAATCCATGGCCATAAAAGGTAGACAGCCCAGTCCTTGGAGATTATATTTTAAAGAATAAATAAATGTTTGTTGATATTAGGATAATAATTTTTTCTTTACTTCTCTTTATTCCAAAAAAAAAATTGATTTCCAAGAATTATTAAAGTAAATTAGAATGTTATCCATTTTTTAATATTTGATTTTAATATTTCAACGTCAATTTTGTAAAAAAATATATATTTTTATTAACTTGGTTTTTTAAAATTTCTATTTAAGTTAAAAAAGAAGTGAAAAATTATTTTAAAATATTAATGGATTTTTAGATTTTTTTTTTTTTTTTTTGTATAATTGCTGACTAGGCAAACAGATATTAGTTGAAAAATGCCAAGTGGACAAAAGGTGAAACAGTTGGAAATATGGAATCCAAGTGGAGATGCCACATTCACTTTCTTACTCACTAAGAAAATGACACGTGGCGCGTTCTTATTCAACCAATGAGTCCTTTTGGGAATTTCTTTTTGCCCTTTATTAGCCTTTTAATTGCCATTCAATTTACACTTATGTCCCGTCCGTCAGTCCCATCTGACACACGGTGACAACTAGTCGCTATCGTTTGTGGATGCCACGTGCTACGTATTTCCACTCTATTGTTAAATTAAAGAATAAAATTAAAAAAAGAAAATATACGCTAAATTAACAAAAAAAAAATTAATTCTTATAAATAATTTTAAAAGTTTAAATAATTCTTTTAAATTTCTAAAAAAAAATAATTATTTTTATTTTTATTTTTATCCCTTTCAAAAATACTCTTTAATTTTCAAAATTATTTCAAATATACATTTAATACTCTTAAATTTTTTTTCAAATTTTTAAAAACACCTTTAAACTAACCAAAAAAACTCTACCTTAGTAATATTAAAAAATTCGAATTCATAGACAACTTTCATCCATGCTGGTAAAGATTTTTCTGAACCTTTTTTATAACCGTAAATGATTTTTTAAATATAGTACGACAAACATATTTTTTAAATTTTTAAAAAAGTTGAAGGGTATTAATAAAATTTTTAAAAGTTGAAACACTCTTAAAAATTCAAAAATATTTTGAAATAAAATACCAGTTCTATCTAAAGCTAACAGTAGGGTATTTTTTTAGACAAATATAAAAGTTAGTCATCCGACTCAAATTCAACGAGCAAACATATTAGTACTTGATCAATAAGTGAATAGGACGATCCAAAAAAAATCAACCAGTAAAAACCCAAAACTTATATACTCTAGAGATAATCTAAGAATAAATATTAAATAACGTGATCGATGAAACAATGATTAAAATCATTTAAAATTCTAAACATTAGAAAATAACAACACCCATATAAAATAAAATAAAATAAAAAAGTATTTGATAGATTTAATTTTTAAAAATTAAAAACTATGAAATAGAATTTAAATCTACCTTTAAATTATAATAAGATTTAAATAGTTGTTTTTTTTTTTATGGAGAGATTAAAAGGAAAAAGACAAATAAGGACAAATATAATAATGGTTAACATTATCCATTTCTTTATCCAATGAAGAATTTTAAAATAATTAAAAATAATAATAATTATAATAATAATAATTTGGGAGAAAAATCCAAATAGCAATAATTGAAGATATTGGAAGGATGATTTAGCATTTCTATATCATTTTCTTTTCTAATCATTTGGTTCCTTAAACAAATCTAACATTTCACCGCTCAAGCTTATCGCTACAAAATATTTTTCGTTTTAGTTCGTTACGTATCGTTTTCAACATCACGGTTTTAAAATATGTTTACTAAGGAGAGGTTTTTACACCTTTATAAGGAACGTTTCGTTCTCCTTTCCAATCAACATAGGATCTTATAATAAAACGGACAATATCTACTAGCGGTGAGTTTTACATGTATTAAACCTTGCACCAACAGATATCTACCAAATGATCATCAACCTTCGTAGGGTCTCTTCCCTCACCTCTTGACTGCTTCGATTTTGATTCGAATCATCCATCTATTTCTTTAAAAACACATTGCCGACAGTATTTCCTACCATCGTAGGAGACACACCGTCTACGTAGAATCAACAATTTTTTTTTGTGGGTTAGGTTGAGTCGAGTTGGATCTCTGTCACCAAACCGGCAAACCCATGTAGAAACGAGAAACCACATAAATCTAGCCCATCCTTGAAGCCAAGCCCATCAAATGCATGACCCAAGTTCGTGCTCGAGAGCCCAACAAGAGTAAGGTTCAATAGACGAATTCAAAAACGCCCCACGCAAAAACATAAAGTCGTGCTAAAAAAATAGGTCATTACATTTAATAAAAATATGTTTGGACTAAAAGTGTTTTTTTTTTTTTTTTCTTTTTGCATTTAAAGATATTAAGTAA

mRNA sequence

ATGAACGCCTCCACCATCTCCTGGAACTCCTCGTTGCTCATTCCATCTTCCGGATACGAGATTTGTTCTGTTCCTTCACTCAATCGGACGATTTTTTTGCTTTTTTCTGTTTCTGATCGGCTCAGTTTGCTGTGCGGATTCTCTCGCTGCGTTGCCGCTTCCGCTATCGATCTGCTTGATTCGGTACTTGATGGAGGCGTCGCCATGGACGTTTCCGCTTCCGCTTCCGCTATCGATCTGCTTGATTCGATAATCGATGGAGGCGTCGCCTTGGACGTTGCCGCTGCCGCTATCGGTCTGCTTGATTCGGTACTTGATCTCGGCGCGACGAGTTCTTTGATTCTTCTCGCTGTTTTGGATGAACTCCTCGTAAAGATCGGCAACCGAATTCTTCTTGCTCAGATCCGTACCAGAGAACTGTCCCGATTTAGCGAACAGAGTGATGACTATCGCGTTTCCGATCAGAAACACGAAGCGAGGACTAATCAAAGTCATCGACAAGCACCGGAAAAACCGACAGACTCCATTTCCAGAAACAACAAAATCAATCCAGTGAAAACAACAACAACAACAACAACAGAATTTACAAAGACGATCAGGAAACTGGACGGTGCTGCAAAGAAATTTGGCGATTGGAAGCATGGAAACAGAGAGAAAATCAACAAGACAAAATTTGAGGAACAAAGAAAAACAGAAAGTAGGATTGTATTTCCTACCATCCCCATCCTTGAAGCCAAGCCCATCAAATGCATGACCCAAGTTCGTGCTCGAGAGCCCAACAAGAATATTAAGTAA

Coding sequence (CDS)

ATGAACGCCTCCACCATCTCCTGGAACTCCTCGTTGCTCATTCCATCTTCCGGATACGAGATTTGTTCTGTTCCTTCACTCAATCGGACGATTTTTTTGCTTTTTTCTGTTTCTGATCGGCTCAGTTTGCTGTGCGGATTCTCTCGCTGCGTTGCCGCTTCCGCTATCGATCTGCTTGATTCGGTACTTGATGGAGGCGTCGCCATGGACGTTTCCGCTTCCGCTTCCGCTATCGATCTGCTTGATTCGATAATCGATGGAGGCGTCGCCTTGGACGTTGCCGCTGCCGCTATCGGTCTGCTTGATTCGGTACTTGATCTCGGCGCGACGAGTTCTTTGATTCTTCTCGCTGTTTTGGATGAACTCCTCGTAAAGATCGGCAACCGAATTCTTCTTGCTCAGATCCGTACCAGAGAACTGTCCCGATTTAGCGAACAGAGTGATGACTATCGCGTTTCCGATCAGAAACACGAAGCGAGGACTAATCAAAGTCATCGACAAGCACCGGAAAAACCGACAGACTCCATTTCCAGAAACAACAAAATCAATCCAGTGAAAACAACAACAACAACAACAACAGAATTTACAAAGACGATCAGGAAACTGGACGGTGCTGCAAAGAAATTTGGCGATTGGAAGCATGGAAACAGAGAGAAAATCAACAAGACAAAATTTGAGGAACAAAGAAAAACAGAAAGTAGGATTGTATTTCCTACCATCCCCATCCTTGAAGCCAAGCCCATCAAATGCATGACCCAAGTTCGTGCTCGAGAGCCCAACAAGAATATTAAGTAA

Protein sequence

MNASTISWNSSLLIPSSGYEICSVPSLNRTIFLLFSVSDRLSLLCGFSRCVAASAIDLLDSVLDGGVAMDVSASASAIDLLDSIIDGGVALDVAAAAIGLLDSVLDLGATSSLILLAVLDELLVKIGNRILLAQIRTRELSRFSEQSDDYRVSDQKHEARTNQSHRQAPEKPTDSISRNNKINPVKTTTTTTTEFTKTIRKLDGAAKKFGDWKHGNREKINKTKFEEQRKTESRIVFPTIPILEAKPIKCMTQVRAREPNKNIK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G003930.1CmoCh02G003930.1mRNA