CmoCh02G000890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G000890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Reticulon-like protein
Location	Cmo_Chr02: 469358 .. 471634 (-)
RNA-Seq Expression	CmoCh02G000890
Synteny	CmoCh02G000890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGTTCTTCCTTCAAAATCAAAATCAAAACTCCAACAGTTCTCAAAATCTATGACCCTCTAATCGTTACGATTCAGAAGTAAATTGTTTGAATCTTCTCCATGGATTTCACTCCTCCATCTCACAGATCCGAAACTCGATCTCGCACAAAATCAGCCTCTCGCCTCGCAATCGAAGGCGACGAAATACCCCATTTCTCAGTCGACGCCATTTCTTCACCGCCCAAGAAATCCCCTTCCCCTTCCATACAAGACCTTTTTCTTCTCTCGCCTTCCACTCTCAGAAAATCCAGGTCTCGTCTCGTGGATCGCTTCGAAATGAACGACGAGGTTACAGACGCCGCCGCCGCACGCAGAAGGTGTAAAACTCGCGGCCCCCAAATAGGTTGTGCTTCTCCGAGGAGTGTGAGAAGGTCTAGAAGACGATCGGAAATGGAGATAAGAGAAGAGAAGGATTTGTGTTTGGCGGAAGAGTTCGTGAAGGCTAGAAAACGAAGGCCGAGTGGGAGATCGAAGAAGGAGAAGCTGAGTTTGGTTCCAGTTCCAACGACGCCTGTAAATTCAACTCCAAGTAATTCAAAGATTTCTCTATTCTCCTTTACTTGATATTCTCGATTGATTTGCGTTCTCTTTGTTCTGATTTGGCTCGTATGTGTTCTATAGAACTTGATAATGATGAGAATGGTAATCTGGATCGAATTGGGCAACTCATAACTGATCTGATCATGTGGAAAGATGCGGCGAAATCCAGCCTTTGGTTTGGATTTGGCTCTTTGTTTTTCTTATCCTCTTGCTTTGCTAGAGGAGCTAGCTTCAGGTCTGGCTCTCTAATCCTTAACCATTATAGCTTTCTACGAGTATATGATCATTCAAGAACAGTTCTAATACCGATAATTACAGCATTTTCTCAGCGATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCGAAGGTACAGTTTCTTGACTATAATCAATCGCATCAAAACCCCACCAATCTTCGTTCTTGATTGAATATATGAATTTGTAGGAACAATGTGGAAAAGAAACATAATGACTTCAAGCTTAAAGAAGAGGACATCCTACGCATGGCGAAATTGATTCTTCCAGCTGCAAACTTCGCCATTTCTAAGATAAGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCCTGAAAGTAACCACAAAGCTCCTCATCTTTGATCATTCAATAATTTCTATTAACCAATCATTTGAACGCTTAAATGATCCAAAACTTTCTGGGTTTGCAGGTAGCTCCATTCCTCATATTAGGAGCTGAGTATGGACATCTTATTACACTTAGAAGACTTTGTGCAATTGGTATAAACTATAACAAAGACCATTTCAAAACCTGCTTGAAATTCTCTGTTGATTTAATCTCCATTTGAATACAGGGTTCTTTACCAGTTTCTCTGTGCCAAAGCTATACTCATGTTACCAAATTCAGATTAACAGCAAAGGTAAATAGAAATTCTAGGCACACCCACTTAAAAACATTGCTGCTTCTGCATTTTGTGTTGTAATATGATGCTGATGAAAATCATGGGGTTCGAGTTTTTATAGTCGATGTCGTGAAGCGACGGTTGTTTGAAGCATGGAAAGCTTGCTCACATAAGAAGGTTGTGGTAGGATCAGCAGCCACAGTGTTTTGGAACCTTTCTTCCCTAAAGACCAGAATTTTCACAGGTGAAATTCTTTGAGATGTTGTCAATGTGTTCATTTTCCATTCAGGAAATAATGATTGTTAAGCTGTGTAAGATTTTCTTGTTGCAGCTTTCATAGCTGTAGTTATAGTTCGATACTGCCGGCAATTTATAGTGCTGGCACCGGAAGTTGTAGAAGCACAAGAAGAGGAGAACCAGGCGGTAGTTCTGGTAGAAGGGAAGGAGGAGGAGGAGGAGCAGAGGCAGGCTCTGGTGGTGGCGGAAGCCCATGGCCAGCCTTGATTTTGGCTTTATCATATTGTAATAATAGAAATGGCTGTGTGTTGTGTTCGAGCTTAAATTTCATTGATTGATTCAAACAAACATCTTGTTCTCAGATCAGCAGAAGCTGTACTCTGTCTAAGAAAAGGAAAAGTTCTACAGATCAACGAGTATGAAATGGCTGGTCGGTTAGGATCATCTTAACGAGTCTCGTTTATTGATACTCTTATCACTTTATTTGTTTATGTAAAAAAGCAAAGCTCTATTTATTCATATTGTGTTTTAATGAATTGAGAGTCGAGAGGAAGTAAT

mRNA sequence

AGAGTTCTTCCTTCAAAATCAAAATCAAAACTCCAACAGTTCTCAAAATCTATGACCCTCTAATCGTTACGATTCAGAAGTAAATTGTTTGAATCTTCTCCATGGATTTCACTCCTCCATCTCACAGATCCGAAACTCGATCTCGCACAAAATCAGCCTCTCGCCTCGCAATCGAAGGCGACGAAATACCCCATTTCTCAGTCGACGCCATTTCTTCACCGCCCAAGAAATCCCCTTCCCCTTCCATACAAGACCTTTTTCTTCTCTCGCCTTCCACTCTCAGAAAATCCAGGTCTCGTCTCGTGGATCGCTTCGAAATGAACGACGAGGTTACAGACGCCGCCGCCGCACGCAGAAGGTGTAAAACTCGCGGCCCCCAAATAGGTTGTGCTTCTCCGAGGAGTGTGAGAAGGTCTAGAAGACGATCGGAAATGGAGATAAGAGAAGAGAAGGATTTGTGTTTGGCGGAAGAGTTCGTGAAGGCTAGAAAACGAAGGCCGAGTGGGAGATCGAAGAAGGAGAAGCTGAGTTTGGTTCCAGTTCCAACGACGCCTGTAAATTCAACTCCAAAACTTGATAATGATGAGAATGGTAATCTGGATCGAATTGGGCAACTCATAACTGATCTGATCATGTGGAAAGATGCGGCGAAATCCAGCCTTTGGTTTGGATTTGGCTCTTTGTTTTTCTTATCCTCTTGCTTTGCTAGAGGAGCTAGCTTCAGCATTTTCTCAGCGATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCGAAGGAACAATGTGGAAAAGAAACATAATGACTTCAAGCTTAAAGAAGAGGACATCCTACGCATGGCGAAATTGATTCTTCCAGCTGCAAACTTCGCCATTTCTAAGATAAGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCCTGAAAGTAGCTCCATTCCTCATATTAGGAGCTGAGTATGGACATCTTATTACACTTAGAAGACTTTGTGCAATTGGGTTCTTTACCAGTTTCTCTGTGCCAAAGCTATACTCATGTTACCAAATTCAGATTAACAGCAAAGTCGATGTCGTGAAGCGACGGTTGTTTGAAGCATGGAAAGCTTGCTCACATAAGAAGGTTGTGGTAGGATCAGCAGCCACAGTGTTTTGGAACCTTTCTTCCCTAAAGACCAGAATTTTCACAGCTTTCATAGCTGTAGTTATAGTTCGATACTGCCGGCAATTTATAGTGCTGGCACCGGAAGTTGTAGAAGCACAAGAAGAGGAGAACCAGGCGGTAGTTCTGGTAGAAGGGAAGGAGGAGGAGGAGGAGCAGAGGCAGGCTCTGGTGGTGGCGGAAGCCCATGGCCAGCCTTGATTTTGGCTTTATCATATTGTAATAATAGAAATGGCTGTGTGTTGTGTTCGAGCTTAAATTTCATTGATTGATTCAAACAAACATCTTGTTCTCAGATCAGCAGAAGCTGTACTCTGTCTAAGAAAAGGAAAAGTTCTACAGATCAACGAGTATGAAATGGCTGGTCGGTTAGGATCATCTTAACGAGTCTCGTTTATTGATACTCTTATCACTTTATTTGTTTATGTAAAAAAGCAAAGCTCTATTTATTCATATTGTGTTTTAATGAATTGAGAGTCGAGAGGAAGTAAT

Coding sequence (CDS)

ATGGATTTCACTCCTCCATCTCACAGATCCGAAACTCGATCTCGCACAAAATCAGCCTCTCGCCTCGCAATCGAAGGCGACGAAATACCCCATTTCTCAGTCGACGCCATTTCTTCACCGCCCAAGAAATCCCCTTCCCCTTCCATACAAGACCTTTTTCTTCTCTCGCCTTCCACTCTCAGAAAATCCAGGTCTCGTCTCGTGGATCGCTTCGAAATGAACGACGAGGTTACAGACGCCGCCGCCGCACGCAGAAGGTGTAAAACTCGCGGCCCCCAAATAGGTTGTGCTTCTCCGAGGAGTGTGAGAAGGTCTAGAAGACGATCGGAAATGGAGATAAGAGAAGAGAAGGATTTGTGTTTGGCGGAAGAGTTCGTGAAGGCTAGAAAACGAAGGCCGAGTGGGAGATCGAAGAAGGAGAAGCTGAGTTTGGTTCCAGTTCCAACGACGCCTGTAAATTCAACTCCAAAACTTGATAATGATGAGAATGGTAATCTGGATCGAATTGGGCAACTCATAACTGATCTGATCATGTGGAAAGATGCGGCGAAATCCAGCCTTTGGTTTGGATTTGGCTCTTTGTTTTTCTTATCCTCTTGCTTTGCTAGAGGAGCTAGCTTCAGCATTTTCTCAGCGATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCGAAGGAACAATGTGGAAAAGAAACATAATGACTTCAAGCTTAAAGAAGAGGACATCCTACGCATGGCGAAATTGATTCTTCCAGCTGCAAACTTCGCCATTTCTAAGATAAGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCCTGAAAGTAGCTCCATTCCTCATATTAGGAGCTGAGTATGGACATCTTATTACACTTAGAAGACTTTGTGCAATTGGGTTCTTTACCAGTTTCTCTGTGCCAAAGCTATACTCATGTTACCAAATTCAGATTAACAGCAAAGTCGATGTCGTGAAGCGACGGTTGTTTGAAGCATGGAAAGCTTGCTCACATAAGAAGGTTGTGGTAGGATCAGCAGCCACAGTGTTTTGGAACCTTTCTTCCCTAAAGACCAGAATTTTCACAGCTTTCATAGCTGTAGTTATAGTTCGATACTGCCGGCAATTTATAGTGCTGGCACCGGAAGTTGTAGAAGCACAAGAAGAGGAGAACCAGGCGGTAGTTCTGGTAGAAGGGAAGGAGGAGGAGGAGGAGCAGAGGCAGGCTCTGGTGGTGGCGGAAGCCCATGGCCAGCCTTGA

Protein sequence

MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEAHGQP

Homology

[Close]

BLAST of CmoCh02G000890 vs. ExPASy Swiss-Prot
Match: Q6DR04 (Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.1e-98
Identity = 224/432 (51.85%), Postives = 290/432 (67.13%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPS----IQDLFLLS 60
           M+ TPP H    RS TKSASRL  +    P+ S+D + S P  +P+PS    ++D+ LL 
Sbjct: 1   MESTPPYH----RSNTKSASRLQ-DSSNPPNLSLDLVLSSP-NTPNPSSPVPLRDILLLP 60

Query: 61  PSTLRKSRSRLVDRFEMNDEVTDA-AAARRRCKTRGPQIG-CASPRSVRRSRRRSEMEIR 120
           PS LRKSR+RL DR EM  E  DA A  R+R K +G Q    ASPR+ RRSRRRSE    
Sbjct: 61  PSPLRKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEE 120

Query: 121 EEKDLCLAEEFVK--ARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL 180
           +E +L + EE VK   RKR+ +GR KK+K S  P    P+ S+  L N    +L+ IG++
Sbjct: 121 KEANLVI-EEIVKLPPRKRKTNGRPKKDKQSSAP----PLCSSSDLPNTCQSDLNLIGEI 180

Query: 181 ITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICR 240
           I+DL+MW+D AKS+LWFGFG L FLSSCFA+G +FS+FSA+S LGL+ L  +F+SN++C+
Sbjct: 181 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 240

Query: 241 RNNVEKKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEY 300
           R N + K   F + E+D+LR A+ +LPA NF ISK  ELF GE  MTLKV PFL+LGAEY
Sbjct: 241 RKNEDTK-RAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEY 300

Query: 301 GHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAA 360
           GHLITL RL A GFF SF++PKLYSCY  QI+ KV+ VK R+ EAW  CSHKK++ GSA 
Sbjct: 301 GHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSAV 360

Query: 361 TVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQR 420
           T FWNL+S++TRIF  FI +VI RY RQ + L PE VE  E E +   L + +E   ++ 
Sbjct: 361 TAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVEPVENEQEEETLPQEEETVPQEE 418

Query: 421 QALVVAEAHGQP 425
           + +   E   QP
Sbjct: 421 ETVPQEEEQTQP 418

[Close]

BLAST of CmoCh02G000890 vs. ExPASy Swiss-Prot
Match: Q8LDS3 (Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 332.0 bits (850), Expect = 9.7e-90
Identity = 211/446 (47.31%), Postives = 289/446 (64.80%), Query Frame = 0


Query: 4   TPPSHRSETRSRTKSA-SRLAIEGDEIPHFSVDAISSPPKKS-----PSP---------- 63
           TPPS RS TRS  + A +   +    IP  S+D +   PK +     PSP          
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIP--SLDLVLLSPKNNNGTPYPSPVSLSSPSSPV 65

Query: 64  SIQDLFLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIG---CASPRSVRR 123
           +++++ LLSPS LRKSR+RL +RF+M  E  +AA   RR KT+G Q G     SPR+ RR
Sbjct: 66  TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFRR 125

Query: 124 SRRRSEMEIREEKD-----LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLD 183
           SR RSE  +  +++     +   E+    RK++  GRSKKEK S VP+  +P  S+ +  
Sbjct: 126 SRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQPQ 185

Query: 184 NDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCF-ARGASFSIFSAISQLGL 243
           +   G+L+RI + I+DLIMW+D AKS+LWFGFG + FLS+CF A+G +FS+FSAIS LGL
Sbjct: 186 DVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLGL 245

Query: 244 LFLGLAFVSNSICRRNNVEKKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEM 303
           LFLG++F+SN++ R+   E+   + KL E+D+LR+A+ +LP  N AISK  ELF GE  M
Sbjct: 246 LFLGVSFLSNTL-RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAM 305

Query: 304 TLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAW 363
           TLKVAPF+++GAEYG+LITL RLCA GFF SF++PKLYSCY  Q+N KV+  +RR  EAW
Sbjct: 306 TLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAW 365

Query: 364 KACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQA 418
             C+HKK V GSA T FWNL+SLKTR    FI VV++RY RQ + L  E  E ++++ + 
Sbjct: 366 GVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLDSEDEEEKKQQEKT 425

[Close]

BLAST of CmoCh02G000890 vs. ExPASy Swiss-Prot
Match: Q56X72 (Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 5.0e-38
Identity = 94/276 (34.06%), Postives = 157/276 (56.88%), Query Frame = 0


Query: 139 KEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL--ITDLIMWKDAAKSSLWFGFGSLFF 198
           K   S+   P    +ST +    E+       +L  + DL+MW+D ++S+L FGFG+   
Sbjct: 194 KRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLI 253

Query: 199 LSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNV-EKKHNDFKLKEEDILRMAK 258
           +SS +A   +FS  S ++ +GL++LGL FV  S+  R  V E++H    ++EED+ RM +
Sbjct: 254 ISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLR 313

Query: 259 LILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKL 318
           LI+P  N ++ ++R LF G+   TLK+   L + A  G  ITL  L   GF  +F++PK+
Sbjct: 314 LIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKI 373

Query: 319 YSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIV 378
           +  Y    ++  +   RR  +AW++C+HKK V  +  T+ WNLSS+  R++ AF+ +V  
Sbjct: 374 FISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAF 433

Query: 379 RYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQ 412
           RY +  ++   +  +  E++N+     E  EEE+EQ
Sbjct: 434 RYYQHKMIWTTDQADDDEDDNEE----EEAEEEKEQ 465

[Close]

BLAST of CmoCh02G000890 vs. ExPASy TrEMBL
Match: A0A6J1G5Q6 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451056 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 2.5e-229
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL
Sbjct: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120
           RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120

Query: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180
           LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK
Sbjct: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180

Query: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH 240
           DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH
Sbjct: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH 240

Query: 241 NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300
           NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR
Sbjct: 241 NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300

Query: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360
           LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS
Sbjct: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360

Query: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA 420
           LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA
Sbjct: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA 420

Query: 421 HGQP 425
           HGQP
Sbjct: 421 HGQP 424

[Close]

BLAST of CmoCh02G000890 vs. ExPASy TrEMBL
Match: A0A6J1I617 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469924 PE=4 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 8.5e-222
Identity = 414/431 (96.06%), Postives = 421/431 (97.68%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDL LLSPSTL
Sbjct: 1   MDFTPPSHRSEPRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTD-AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL 120
           RKSRSRLVDRFEMNDEVTD AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL 120

Query: 121 CLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMW 180
           CLAEEFVKARKRRPSGRSKKEKLSLVPVPT+P+NSTPKLDNDENGNLDRIGQLITDLIMW
Sbjct: 121 CLAEEFVKARKRRPSGRSKKEKLSLVPVPTSPINSTPKLDNDENGNLDRIGQLITDLIMW 180

Query: 181 KDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKK 240
           KDA KSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVE+K
Sbjct: 181 KDATKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVERK 240

Query: 241 HNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLR 300
           HNDFKLKE+DILRMAKLILPAANFAI+KIRELFCGEAEMTLKVAPFLILGAEYGHLITLR
Sbjct: 241 HNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLR 300

Query: 301 RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS 360
           RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS
Sbjct: 301 RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS 360

Query: 361 SLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGK------EEEEEQRQ 420
           SLKTRIFTAFIAVVIVRYCRQFIVLAPEVV+AQEEENQAVVLVEGK      EEEEEQ+Q
Sbjct: 361 SLKTRIFTAFIAVVIVRYCRQFIVLAPEVVQAQEEENQAVVLVEGKEEEEEEEEEEEQKQ 420

Query: 421 ALVVAEAHGQP 425
           ALVVAEAHGQP
Sbjct: 421 ALVVAEAHGQP 431

[Close]

BLAST of CmoCh02G000890 vs. ExPASy TrEMBL
Match: A0A6J1FUA5 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448200 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 3.6e-188
Identity = 357/428 (83.41%), Postives = 385/428 (89.95%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           M+FTPPSHRSE RSRTKSA+RLAIE D+IPHFSV+ ISSPP K+ SPSI    LLSPSTL
Sbjct: 1   MEFTPPSHRSEPRSRTKSAARLAIEADQIPHFSVETISSPPNKTHSPSIHQPLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRG---PQIGCASPRSVRRSRRRSEMEIREEK 120
           RKSRSRLVDRFEMNDEV +AAAARRRCKTRG     +GCASPRSVRRSRRRSE+EIREE+
Sbjct: 61  RKSRSRLVDRFEMNDEVMEAAAARRRCKTRGLPFGLLGCASPRSVRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLI 180
           DL LAEEFVK RK+R SGRSKK+KLSLVPVPT P +STPKLDNDENG+LDRI QLITDLI
Sbjct: 121 DLSLAEEFVKTRKKRQSGRSKKDKLSLVPVPTMPSSSTPKLDNDENGSLDRIRQLITDLI 180

Query: 181 MWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVE 240
           MWKDAAKSS WFG GSLFF SSCFARG SFSIFSA+S LGLLFLGLAFVSNSIC+RNNVE
Sbjct: 181 MWKDAAKSSFWFGLGSLFFFSSCFARGVSFSIFSAVSHLGLLFLGLAFVSNSICQRNNVE 240

Query: 241 KKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300
           KKHNDFKLKE+DILRM KL+LPAANF IS I ELFCGEAEMTLKVAPFLILGAEYGHLIT
Sbjct: 241 KKHNDFKLKEDDILRMVKLVLPAANFVISNITELFCGEAEMTLKVAPFLILGAEYGHLIT 300

Query: 301 LRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWN 360
           LRRLCAIGFFTSFSVPKLYSCYQI+INSK D VK+R+FE W+ACSHKKVVVGSAATVFWN
Sbjct: 301 LRRLCAIGFFTSFSVPKLYSCYQIKINSKADAVKQRMFEVWEACSHKKVVVGSAATVFWN 360

Query: 361 LSSLKTRIFTAFIAVVIVRYCRQFIVLA-PEVVEAQEEENQAVVLVEGKEEEEEQRQALV 420
            SSLKTRIFTAFIA+VIVRYCRQFIV + PE V+ QE+E QA+VLVE + +EEEQRQALV
Sbjct: 361 FSSLKTRIFTAFIALVIVRYCRQFIVSSEPEAVDVQEDECQALVLVE-QGKEEEQRQALV 420

Query: 421 VAEAHGQP 425
           VAE H QP
Sbjct: 421 VAEPHRQP 427

[Close]

BLAST of CmoCh02G000890 vs. ExPASy TrEMBL
Match: A0A6J1J6B9 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483853 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 6.1e-188
Identity = 354/428 (82.71%), Postives = 382/428 (89.25%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRS+ RSRTKSA+RLAIE D+IPHFSV+ ISSPP K+ SPSI    LLSPSTL
Sbjct: 1   MDFTPPSHRSDPRSRTKSAARLAIEADQIPHFSVETISSPPNKTHSPSIHQPLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRG---PQIGCASPRSVRRSRRRSEMEIREEK 120
           RKSRSRLVDRFEMNDEV +AAA RRRCKTRG     +GCASPRSVRRSRRRSE+EIREE+
Sbjct: 61  RKSRSRLVDRFEMNDEVMEAAAVRRRCKTRGLPFGLLGCASPRSVRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLI 180
           DL LAEEFVK RK+R SGRSKK+KLSLVPVPT P +STPKLDNDENG+LDRI QLITDLI
Sbjct: 121 DLSLAEEFVKTRKKRQSGRSKKDKLSLVPVPTMPSSSTPKLDNDENGSLDRIRQLITDLI 180

Query: 181 MWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVE 240
           MWKDAAKSS WFG GSLFF SSCFARG SFSIFSA+S LGLLFLGLAFVSNSIC+RNNVE
Sbjct: 181 MWKDAAKSSFWFGLGSLFFFSSCFARGVSFSIFSAVSHLGLLFLGLAFVSNSICQRNNVE 240

Query: 241 KKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300
           KKHNDFKLKE+D+LRM KL+LPAANF IS I ELFCGEAEMTLKVAPFLILGAEYGHLIT
Sbjct: 241 KKHNDFKLKEDDVLRMVKLVLPAANFVISNITELFCGEAEMTLKVAPFLILGAEYGHLIT 300

Query: 301 LRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWN 360
           LRRLCAIGFF SFSVPKLYSCYQI+INSK D VK+ +FE W+ACSHKKVVVGSAATVFWN
Sbjct: 301 LRRLCAIGFFASFSVPKLYSCYQIKINSKADAVKQWMFEVWEACSHKKVVVGSAATVFWN 360

Query: 361 LSSLKTRIFTAFIAVVIVRYCRQFIVLA-PEVVEAQEEENQAVVLVEGKEEEEEQRQALV 420
            SSLKTRIFTAFIA+VIVRYCRQFIV + PE V+ QE+E QA+VLVE  +EEEEQRQALV
Sbjct: 361 FSSLKTRIFTAFIALVIVRYCRQFIVSSEPEAVDVQEDECQALVLVEKAKEEEEQRQALV 420

Query: 421 VAEAHGQP 425
           VAE H QP
Sbjct: 421 VAEPHRQP 428

[Close]

BLAST of CmoCh02G000890 vs. ExPASy TrEMBL
Match: A0A5A7V8Z7 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005310 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 4.0e-187
Identity = 347/425 (81.65%), Postives = 384/425 (90.35%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MD TPPSHRS+ RSR KS+SRLA+E D+ PHFSVDAISSP +K+PSPSIQDL  LSPST+
Sbjct: 1   MDLTPPSHRSDPRSRPKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDLLFLSPSTV 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQI---GCASPRSVRRSRRRSEMEIREEK 120
            KSRSRLVDRFEMNDEV + A +RRRC+ RGPQ+   GC+SPRS+RRSRRRSE+EIREE+
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCSSPRSIRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLI 180
           DLCLAEEFVKARKR+ SGRSKKEKLSLVPVP+TP +STPKLDNDENG+ DRIGQLITDLI
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTPKLDNDENGSFDRIGQLITDLI 180

Query: 181 MWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVE 240
           MWKDAAKSSLWFG GSLFF S+CF RG SFSIFSAISQLGLLFLGLAFVSNSIC+RNNVE
Sbjct: 181 MWKDAAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNNVE 240

Query: 241 KKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300
           KKH DFKLKE+DI  + KL+LPAANFAI KIRELFCGEAEMTLKVAPFLILGAEYGHLIT
Sbjct: 241 KKHKDFKLKEDDIKHLVKLVLPAANFAILKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300

Query: 301 LRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWN 360
           LRRLCAIGFF+SFSVPKLYSCYQIQINSKVD VK+ LFEAW+ACSHKKVV+GSAATVFWN
Sbjct: 301 LRRLCAIGFFSSFSVPKLYSCYQIQINSKVDAVKQWLFEAWEACSHKKVVIGSAATVFWN 360

Query: 361 LSSLKTRIFTAFIAVVIVRYCRQFIVLA-PEVVEAQEEENQAVVLVEGKEEEEEQRQALV 420
            SSLKTRIFTAFI +VIVRYCRQFIV + PE+VE QE+E QA+V+VE K EE++Q+Q  V
Sbjct: 361 FSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIVEVQEDERQALVVVESK-EEDDQKQVQV 420

Query: 421 VAEAH 422
           VAE H
Sbjct: 421 VAEPH 424

[Close]

BLAST of CmoCh02G000890 vs. NCBI nr
Match: XP_022947074.1 (reticulon-like protein B17 [Cucurbita moschata])

HSP 1 Score: 804.3 bits (2076), Expect = 5.1e-229
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL
Sbjct: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120
           RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120

Query: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180
           LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK
Sbjct: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180

Query: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH 240
           DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH
Sbjct: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH 240

Query: 241 NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300
           NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR
Sbjct: 241 NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300

Query: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360
           LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS
Sbjct: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360

Query: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA 420
           LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA
Sbjct: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA 420

Query: 421 HGQP 425
           HGQP
Sbjct: 421 HGQP 424

[Close]

BLAST of CmoCh02G000890 vs. NCBI nr
Match: KAG6604780.1 (Reticulon-like protein B17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 795.4 bits (2053), Expect = 2.4e-226
Identity = 419/424 (98.82%), Postives = 421/424 (99.29%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDL LLSPSTL
Sbjct: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120
           RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120

Query: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180
           LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK
Sbjct: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180

Query: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH 240
           DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLL LGLAFVSNSICRRNNVEKKH
Sbjct: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVEKKH 240

Query: 241 NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300
           NDFKLKE+DILRMAKLILPAANFAI+KIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR
Sbjct: 241 NDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300

Query: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360
           LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS
Sbjct: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360

Query: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA 420
           LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA
Sbjct: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQRQALVVAEA 420

Query: 421 HGQP 425
           HGQP
Sbjct: 421 HGQP 424

[Close]

BLAST of CmoCh02G000890 vs. NCBI nr
Match: KAG7034905.1 (Reticulon-like protein B17 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 790.8 bits (2041), Expect = 5.8e-225
Identity = 419/425 (98.59%), Postives = 421/425 (99.06%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDL LLSPSTL
Sbjct: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120
           RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120

Query: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180
           LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK
Sbjct: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180

Query: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH 240
           DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLL LGLAFVSNSICRRNNVEKKH
Sbjct: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVEKKH 240

Query: 241 NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300
           NDFKLKE+DILRMAKLILPAANFAI+KIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR
Sbjct: 241 NDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300

Query: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360
           LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS
Sbjct: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360

Query: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGK-EEEEEQRQALVVAE 420
           LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGK EEEEEQRQALVVAE
Sbjct: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEEQRQALVVAE 420

Query: 421 AHGQP 425
           AHGQP
Sbjct: 421 AHGQP 425

[Close]

BLAST of CmoCh02G000890 vs. NCBI nr
Match: XP_023533892.1 (reticulon-like protein B17 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 779.6 bits (2012), Expect = 1.3e-221
Identity = 414/428 (96.73%), Postives = 420/428 (98.13%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDL LLSPSTL
Sbjct: 1   MDFTPPSHRSEPRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTD--AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKD 120
           RKSRSRLVDRFEMNDEVTD  AAAARRRCKTRGPQIGCASPRSVRRSRRRSE+EIREEKD
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAAAARRRCKTRGPQIGCASPRSVRRSRRRSELEIREEKD 120

Query: 121 LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIM 180
           LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTP+NSTPKLDNDENGNLDRIGQLITDLIM
Sbjct: 121 LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPINSTPKLDNDENGNLDRIGQLITDLIM 180

Query: 181 WKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEK 240
           WKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEK
Sbjct: 181 WKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEK 240

Query: 241 KHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITL 300
           KHN+FKLKE+DILRMAKLILPAANFAI KIRELFCGEAEMTLKVAPFLILGAEYGHLITL
Sbjct: 241 KHNEFKLKEDDILRMAKLILPAANFAIDKIRELFCGEAEMTLKVAPFLILGAEYGHLITL 300

Query: 301 RRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNL 360
           RRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNL
Sbjct: 301 RRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNL 360

Query: 361 SSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGK--EEEEEQRQALV 420
           SSLKTRIFTAFIAVVIVRYCRQF+VLAPEVVEAQEEENQAVVLVEGK  EEEEEQ+QA V
Sbjct: 361 SSLKTRIFTAFIAVVIVRYCRQFLVLAPEVVEAQEEENQAVVLVEGKEEEEEEEQKQARV 420

Query: 421 VAEAHGQP 425
           VAEAHGQP
Sbjct: 421 VAEAHGQP 428

[Close]

BLAST of CmoCh02G000890 vs. NCBI nr
Match: XP_022971163.1 (reticulon-like protein B17 [Cucurbita maxima])

HSP 1 Score: 779.2 bits (2011), Expect = 1.7e-221
Identity = 414/431 (96.06%), Postives = 421/431 (97.68%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDL LLSPSTL
Sbjct: 1   MDFTPPSHRSEPRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTD-AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL 120
           RKSRSRLVDRFEMNDEVTD AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL 120

Query: 121 CLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMW 180
           CLAEEFVKARKRRPSGRSKKEKLSLVPVPT+P+NSTPKLDNDENGNLDRIGQLITDLIMW
Sbjct: 121 CLAEEFVKARKRRPSGRSKKEKLSLVPVPTSPINSTPKLDNDENGNLDRIGQLITDLIMW 180

Query: 181 KDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKK 240
           KDA KSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVE+K
Sbjct: 181 KDATKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVERK 240

Query: 241 HNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLR 300
           HNDFKLKE+DILRMAKLILPAANFAI+KIRELFCGEAEMTLKVAPFLILGAEYGHLITLR
Sbjct: 241 HNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLR 300

Query: 301 RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS 360
           RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS
Sbjct: 301 RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS 360

Query: 361 SLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGK------EEEEEQRQ 420
           SLKTRIFTAFIAVVIVRYCRQFIVLAPEVV+AQEEENQAVVLVEGK      EEEEEQ+Q
Sbjct: 361 SLKTRIFTAFIAVVIVRYCRQFIVLAPEVVQAQEEENQAVVLVEGKEEEEEEEEEEEQKQ 420

Query: 421 ALVVAEAHGQP 425
           ALVVAEAHGQP
Sbjct: 421 ALVVAEAHGQP 431

[Close]

BLAST of CmoCh02G000890 vs. TAIR 10
Match: AT2G20590.1 (Reticulon family protein )

HSP 1 Score: 361.7 bits (927), Expect = 8.1e-100
Identity = 224/432 (51.85%), Postives = 290/432 (67.13%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPS----IQDLFLLS 60
           M+ TPP H    RS TKSASRL  +    P+ S+D + S P  +P+PS    ++D+ LL 
Sbjct: 1   MESTPPYH----RSNTKSASRLQ-DSSNPPNLSLDLVLSSP-NTPNPSSPVPLRDILLLP 60

Query: 61  PSTLRKSRSRLVDRFEMNDEVTDA-AAARRRCKTRGPQIG-CASPRSVRRSRRRSEMEIR 120
           PS LRKSR+RL DR EM  E  DA A  R+R K +G Q    ASPR+ RRSRRRSE    
Sbjct: 61  PSPLRKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEE 120

Query: 121 EEKDLCLAEEFVK--ARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL 180
           +E +L + EE VK   RKR+ +GR KK+K S  P    P+ S+  L N    +L+ IG++
Sbjct: 121 KEANLVI-EEIVKLPPRKRKTNGRPKKDKQSSAP----PLCSSSDLPNTCQSDLNLIGEI 180

Query: 181 ITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICR 240
           I+DL+MW+D AKS+LWFGFG L FLSSCFA+G +FS+FSA+S LGL+ L  +F+SN++C+
Sbjct: 181 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 240

Query: 241 RNNVEKKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEY 300
           R N + K   F + E+D+LR A+ +LPA NF ISK  ELF GE  MTLKV PFL+LGAEY
Sbjct: 241 RKNEDTK-RAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEY 300

Query: 301 GHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAA 360
           GHLITL RL A GFF SF++PKLYSCY  QI+ KV+ VK R+ EAW  CSHKK++ GSA 
Sbjct: 301 GHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSAV 360

Query: 361 TVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQR 420
           T FWNL+S++TRIF  FI +VI RY RQ + L PE VE  E E +   L + +E   ++ 
Sbjct: 361 TAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVEPVENEQEEETLPQEEETVPQEE 418

Query: 421 QALVVAEAHGQP 425
           + +   E   QP
Sbjct: 421 ETVPQEEEQTQP 418

[Close]

BLAST of CmoCh02G000890 vs. TAIR 10
Match: AT4G28430.1 (Reticulon family protein )

HSP 1 Score: 332.0 bits (850), Expect = 6.9e-91
Identity = 211/446 (47.31%), Postives = 289/446 (64.80%), Query Frame = 0


Query: 4   TPPSHRSETRSRTKSA-SRLAIEGDEIPHFSVDAISSPPKKS-----PSP---------- 63
           TPPS RS TRS  + A +   +    IP  S+D +   PK +     PSP          
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIP--SLDLVLLSPKNNNGTPYPSPVSLSSPSSPV 65

Query: 64  SIQDLFLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIG---CASPRSVRR 123
           +++++ LLSPS LRKSR+RL +RF+M  E  +AA   RR KT+G Q G     SPR+ RR
Sbjct: 66  TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFRR 125

Query: 124 SRRRSEMEIREEKD-----LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLD 183
           SR RSE  +  +++     +   E+    RK++  GRSKKEK S VP+  +P  S+ +  
Sbjct: 126 SRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQPQ 185

Query: 184 NDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCF-ARGASFSIFSAISQLGL 243
           +   G+L+RI + I+DLIMW+D AKS+LWFGFG + FLS+CF A+G +FS+FSAIS LGL
Sbjct: 186 DVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLGL 245

Query: 244 LFLGLAFVSNSICRRNNVEKKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEM 303
           LFLG++F+SN++ R+   E+   + KL E+D+LR+A+ +LP  N AISK  ELF GE  M
Sbjct: 246 LFLGVSFLSNTL-RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAM 305

Query: 304 TLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAW 363
           TLKVAPF+++GAEYG+LITL RLCA GFF SF++PKLYSCY  Q+N KV+  +RR  EAW
Sbjct: 306 TLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAW 365

Query: 364 KACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQA 418
             C+HKK V GSA T FWNL+SLKTR    FI VV++RY RQ + L  E  E ++++ + 
Sbjct: 366 GVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLDSEDEEEKKQQEKT 425

[Close]

BLAST of CmoCh02G000890 vs. TAIR 10
Match: AT2G20590.2 (Reticulon family protein )

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-77
Identity = 179/334 (53.59%), Postives = 229/334 (68.56%), Query Frame = 0


Query: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPS----IQDLFLLS 60
           M+ TPP H    RS TKSASRL  +    P+ S+D + S P  +P+PS    ++D+ LL 
Sbjct: 1   MESTPPYH----RSNTKSASRLQ-DSSNPPNLSLDLVLSSP-NTPNPSSPVPLRDILLLP 60

Query: 61  PSTLRKSRSRLVDRFEMNDEVTDA-AAARRRCKTRGPQIG-CASPRSVRRSRRRSEMEIR 120
           PS LRKSR+RL DR EM  E  DA A  R+R K +G Q    ASPR+ RRSRRRSE    
Sbjct: 61  PSPLRKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEE 120

Query: 121 EEKDLCLAEEFVK--ARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL 180
           +E +L + EE VK   RKR+ +GR KK+K S  P    P+ S+  L N    +L+ IG++
Sbjct: 121 KEANLVI-EEIVKLPPRKRKTNGRPKKDKQSSAP----PLCSSSDLPNTCQSDLNLIGEI 180

Query: 181 ITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICR 240
           I+DL+MW+D AKS+LWFGFG L FLSSCFA+G +FS+FSA+S LGL+ L  +F+SN++C+
Sbjct: 181 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 240

Query: 241 RNNVEKKHNDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEY 300
           R N + K   F + E+D+LR A+ +LPA NF ISK  ELF GE  MTLKV PFL+LGAEY
Sbjct: 241 RKNEDTK-RAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEY 300

Query: 301 GHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSK 327
           GHLITL RL A GFF SF++PKLYSCY  QI+ K
Sbjct: 301 GHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQK 320

[Close]

BLAST of CmoCh02G000890 vs. TAIR 10
Match: AT5G58000.1 (Reticulon family protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-39
Identity = 94/276 (34.06%), Postives = 157/276 (56.88%), Query Frame = 0


Query: 139 KEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL--ITDLIMWKDAAKSSLWFGFGSLFF 198
           K   S+   P    +ST +    E+       +L  + DL+MW+D ++S+L FGFG+   
Sbjct: 194 KRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLI 253

Query: 199 LSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNV-EKKHNDFKLKEEDILRMAK 258
           +SS +A   +FS  S ++ +GL++LGL FV  S+  R  V E++H    ++EED+ RM +
Sbjct: 254 ISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLR 313

Query: 259 LILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKL 318
           LI+P  N ++ ++R LF G+   TLK+   L + A  G  ITL  L   GF  +F++PK+
Sbjct: 314 LIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKI 373

Query: 319 YSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIV 378
           +  Y    ++  +   RR  +AW++C+HKK V  +  T+ WNLSS+  R++ AF+ +V  
Sbjct: 374 FISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAF 433

Query: 379 RYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEQ 412
           RY +  ++   +  +  E++N+     E  EEE+EQ
Sbjct: 434 RYYQHKMIWTTDQADDDEDDNEE----EEAEEEKEQ 465

The following BLAST results are available for this feature:

BLAST of CmoCh02G000890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR04	1.1e-98	51.85	Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1	[more]
Q8LDS3	9.7e-90	47.31	Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2	[more]
Q56X72	5.0e-38	34.06	Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2	[more]

BLAST of CmoCh02G000890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5Q6	2.5e-229	100.00	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451056 PE=4 SV=1	[more]
A0A6J1I617	8.5e-222	96.06	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469924 PE=4 SV=1	[more]
A0A6J1FUA5	3.6e-188	83.41	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448200 PE=4 SV=1	[more]
A0A6J1J6B9	6.1e-188	82.71	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483853 PE=4 SV=1	[more]
A0A5A7V8Z7	4.0e-187	81.65	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8...	[more]

BLAST of CmoCh02G000890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947074.1	5.1e-229	100.00	reticulon-like protein B17 [Cucurbita moschata]	[more]
KAG6604780.1	2.4e-226	98.82	Reticulon-like protein B17, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034905.1	5.8e-225	98.59	Reticulon-like protein B17 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023533892.1	1.3e-221	96.73	reticulon-like protein B17 [Cucurbita pepo subsp. pepo]	[more]
XP_022971163.1	1.7e-221	96.06	reticulon-like protein B17 [Cucurbita maxima]	[more]

BLAST of CmoCh02G000890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20590.1	8.1e-100	51.85	Reticulon family protein	[more]
AT4G28430.1	6.9e-91	47.31	Reticulon family protein	[more]
AT2G20590.2	1.1e-77	53.59	Reticulon family protein	[more]
AT5G58000.1	3.6e-39	34.06	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 391..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..161
None	No IPR available	PANTHER	PTHR46626:SF2	RETICULON-LIKE PROTEIN B17	coord: 1..411
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 174..328 e-value: 4.1E-32 score: 111.3
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 173..334 score: 14.625498
IPR044647	Reticulon-like protein B17/18/21	PANTHER	PTHR46626	RETICULON-LIKE PROTEIN B17	coord: 1..411

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G000890.1	CmoCh02G000890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane