CmoCh01G018370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G018370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein SOB FIVE-LIKE 5
Location	Cmo_Chr01: 13424222 .. 13425328 (-)
RNA-Seq Expression	CmoCh01G018370
Synteny	CmoCh01G018370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAAAGAGAAAAAGGGAAGTTTTTGTTATATAACCATTTCAATTAGCATCACTTCTTCTGCTACCTCTCAAAGCCTAAACCACTGAGTTTCCACCATGAATGATTGGTCTGCTACACATTATTGCAGAGGAGGGGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCTGGTGGCGGGGTGGGTGAGAATTACAGGGAAATAGAAGCAAAAGTAAGAGCAGAGAAGGATGAAGAAGAAGAAGATCTGTCAATGGTGTCTGATGCTTCCTCAGGTCCACCAAATTACAATGAAGAATGCTTTTACAATAATGGGGATTCAGCTTCAGAATCAGCAATGAATTGTAGCCGGGAGGAGAAAAAGAAGAGCAAGAAGGGCAAACAAAATGGCAGAAATGACCAACATTCTTATCTCGATGACACTGCTAGCTCCACGATATATGGCTATGGCTATGGCTATGGCTATGGCAAAGCAAGTGTAAAGAACATTTCCGTTACATTTTTATCTCTAAATTCCAGAAGAAATGGATGAATCTTATGCTGTTCATTGTATATTATGCAGAAAATTAATGGAGCATCAAGCAAAGAAGCATTGGAGACGAATGCAATAGAACTTTCTCAGGGATTCTCCGCAACCCACGTTAAGGTAATTTGATGAAATCATAAGATTGAGCAAGTTTTTGTATGCATTGTTAACTAAAAAAGTGAAACTTTTGAACACAGAGAAAACCTGCGGTGAAGAAACGCTTCGGCTTTTATCGCTCTGAAAGATCAGCACCCGAAGAATGAGGGTATTACCAATTCCGCCGCAGAAGAATGATAACGACATGTTATTTATGTATATAAGGAACATTGTTCCTTTTGTTATTATTTTTTCGTTTCAATTTAATTTTCCCCCAATGTGTTAGCTGTGTGCTTTCTCTTTTACACGTTCTTGTCATTGCAATGGGAAAGTGGAAGCACTAAAAATGGACCCAAAAAAATCGAGAAAGAAAAGAAAAGAAAAGAAAAGTCCTCTCTCGTTCACTAAATAGTGCTCATCGTGTCAACCATGAAGTTACCATCACGTTTACAATGCCTTCGTTTTGATTTACTCCAGCT

mRNA sequence

AGAGAAAGAGAAAAAGGGAAGTTTTTGTTATATAACCATTTCAATTAGCATCACTTCTTCTGCTACCTCTCAAAGCCTAAACCACTGAGTTTCCACCATGAATGATTGGTCTGCTACACATTATTGCAGAGGAGGGGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCTGGTGGCGGGGTGGGTGAGAATTACAGGGAAATAGAAGCAAAAGTAAGAGCAGAGAAGGATGAAGAAGAAGAAGATCTGTCAATGGTGTCTGATGCTTCCTCAGGTCCACCAAATTACAATGAAGAATGCTTTTACAATAATGGGGATTCAGCTTCAGAATCAGCAATGAATTGTAGCCGGGAGGAGAAAAAGAAGAGCAAGAAGGGCAAACAAAATGGCAGAAATGACCAACATTCTTATCTCGATGACACTGCTAGCTCCACGATATATGGCTATGGCTATGGCTATGGCTATGGCAAAGCAAGTAAAATTAATGGAGCATCAAGCAAAGAAGCATTGGAGACGAATGCAATAGAACTTTCTCAGGGATTCTCCGCAACCCACGTTAAGAGAAAACCTGCGGTGAAGAAACGCTTCGGCTTTTATCGCTCTGAAAGATCAGCACCCGAAGAATGAGGGTATTACCAATTCCGCCGCAGAAGAATGATAACGACATGTTATTTATGTATATAAGGAACATTGTTCCTTTTGTTATTATTTTTTCGTTTCAATTTAATTTTCCCCCAATGTGTTAGCTGTGTGCTTTCTCTTTTACACGTTCTTGTCATTGCAATGGGAAAGTGGAAGCACTAAAAATGGACCCAAAAAAATCGAGAAAGAAAAGAAAAGAAAAGAAAAGTCCTCTCTCGTTCACTAAATAGTGCTCATCGTGTCAACCATGAAGTTACCATCACGTTTACAATGCCTTCGTTTTGATTTACTCCAGCT

Coding sequence (CDS)

ATGAATGATTGGTCTGCTACACATTATTGCAGAGGAGGGGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCTGGTGGCGGGGTGGGTGAGAATTACAGGGAAATAGAAGCAAAAGTAAGAGCAGAGAAGGATGAAGAAGAAGAAGATCTGTCAATGGTGTCTGATGCTTCCTCAGGTCCACCAAATTACAATGAAGAATGCTTTTACAATAATGGGGATTCAGCTTCAGAATCAGCAATGAATTGTAGCCGGGAGGAGAAAAAGAAGAGCAAGAAGGGCAAACAAAATGGCAGAAATGACCAACATTCTTATCTCGATGACACTGCTAGCTCCACGATATATGGCTATGGCTATGGCTATGGCTATGGCAAAGCAAGTAAAATTAATGGAGCATCAAGCAAAGAAGCATTGGAGACGAATGCAATAGAACTTTCTCAGGGATTCTCCGCAACCCACGTTAAGAGAAAACCTGCGGTGAAGAAACGCTTCGGCTTTTATCGCTCTGAAAGATCAGCACCCGAAGAATGA

Protein sequence

MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDASSGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYGYGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE

Homology

[Close]

BLAST of CmoCh01G018370 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.4e-11
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 0


Query: 12  GGESGWTMYLDQSYTS--------GGGVGENYREIEA----KVRAEKDEEEEDLSMVSDA 71
           G ESGWT+YLDQS +S          G     R  ++     V  E++EEE+DLSM+SDA
Sbjct: 7   GCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDA 66

Query: 72  SSGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGY 131
           SSGP N +EE      DS  +  +N    +K+  ++ K+      +S LDDTASS ++ +
Sbjct: 67  SSGPRNISEE------DSVKK--INIVGLKKQCKREKKRRDYEKMNSLLDDTASSPLFNF 126

Query: 132 GYGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSE 173
            +         + G   ++    + ++ SQGFSAT  + K A +++ G+   E
Sbjct: 127 PHML----QKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQCGYLHME 167

[Close]

BLAST of CmoCh01G018370 vs. ExPASy Swiss-Prot
Match: B6IDH8 (Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05
Identity = 43/122 (35.25%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 3   DWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDASSG 62
           D+S   Y   G+SGWTMYL      G     +    +      K E +ED SMVSDASSG
Sbjct: 2   DFSDLDYSDAGDSGWTMYL------GHSSSVSLHHFDYHNGETKQEHDEDSSMVSDASSG 61

Query: 63  PPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQ------HSYLDDTASSTI 119
           PP Y EE  +   D   ++     + + K   K K+    +Q      +S  DDTASS  
Sbjct: 62  PPYYCEETVHE--DHLQQNTQYWCKSKSKNKNKNKKKVHEEQGYSERFNSSFDDTASSLP 115

[Close]

BLAST of CmoCh01G018370 vs. ExPASy TrEMBL
Match: A0A6J1FLQ4 (uncharacterized protein LOC111446559 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446559 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120
           SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG
Sbjct: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 179
           YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE
Sbjct: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 178

[Close]

BLAST of CmoCh01G018370 vs. ExPASy TrEMBL
Match: A0A6J1FRE9 (uncharacterized protein LOC111446559 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446559 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.2e-91
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120
           SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG
Sbjct: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 179
           YGYGYGK  KINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE
Sbjct: 121 YGYGYGK--KINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 176

[Close]

BLAST of CmoCh01G018370 vs. ExPASy TrEMBL
Match: A0A6J1IZJ4 (uncharacterized protein LOC111481310 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481310 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.7e-87
Identity = 169/178 (94.94%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKD EEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKD-EEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120
           SGPPNYNEECFYNNG SASESA+NCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG
Sbjct: 61  SGPPNYNEECFYNNGFSASESAINCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 179
           YGYGYGKASKINGASS E LE N+IELSQGFSATH KRKPAVKKRFGFY SERSAPEE
Sbjct: 121 YGYGYGKASKINGASSNEELEANSIELSQGFSATHFKRKPAVKKRFGFYCSERSAPEE 177

[Close]

BLAST of CmoCh01G018370 vs. ExPASy TrEMBL
Match: A0A6J1IWT5 (uncharacterized protein LOC111481310 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481310 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84
Identity = 167/178 (93.82%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKD EEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKD-EEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120
           SGPPNYNEECFYNNG SASESA+NCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG
Sbjct: 61  SGPPNYNEECFYNNGFSASESAINCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 179
           YGYGYGK  KINGASS E LE N+IELSQGFSATH KRKPAVKKRFGFY SERSAPEE
Sbjct: 121 YGYGYGK--KINGASSNEELEANSIELSQGFSATHFKRKPAVKKRFGFYCSERSAPEE 175

[Close]

BLAST of CmoCh01G018370 vs. ExPASy TrEMBL
Match: A0A6J1CDG6 (uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010447 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.0e-55
Identity = 130/191 (68.06%), Postives = 146/191 (76.44%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTS-----GGGVGENYREIEAKVRAEKDEEEEDLSM 60
           MNDWS+ HYC GGESGWTMYLDQSY S     GGGVGENYRE EAKVR E+++EEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPNY---NEECFYNNG-----DSASESAMNCSREEKKKSKKGKQNGRNDQHSY 120
           VSDASSGPP+Y   NE   YNNG      SA+ESA NC +EEKK  KKGK++GRN QHSY
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANC-KEEKK--KKGKKHGRNQQHSY 120

Query: 121 LDDTASSTIYGYGYGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFG 179
           LDDTASS +      YGYGKASKIN A S EA E NA++ SQGFSATH KRK +++K  G
Sbjct: 121 LDDTASSPV------YGYGKASKINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMG 180

[Close]

BLAST of CmoCh01G018370 vs. NCBI nr
Match: XP_022941182.1 (uncharacterized protein LOC111446559 isoform X1 [Cucurbita moschata])

HSP 1 Score: 352.4 bits (903), Expect = 2.2e-93
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120
           SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG
Sbjct: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 179
           YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE
Sbjct: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 178

[Close]

BLAST of CmoCh01G018370 vs. NCBI nr
Match: XP_022941183.1 (uncharacterized protein LOC111446559 isoform X2 [Cucurbita moschata])

HSP 1 Score: 344.7 bits (883), Expect = 4.6e-91
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120
           SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG
Sbjct: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 179
           YGYGYGK  KINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE
Sbjct: 121 YGYGYGK--KINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 176

[Close]

BLAST of CmoCh01G018370 vs. NCBI nr
Match: KAG7037756.1 (hypothetical protein SDJN02_01387, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341.7 bits (875), Expect = 3.9e-90
Identity = 177/186 (95.16%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120
           SGPPNYNEECFYNNG SASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG
Sbjct: 61  SGPPNYNEECFYNNGYSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGY--------GYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSE 179
           YGY        GYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSE
Sbjct: 121 YGYGYGYGYGNGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSE 180

[Close]

BLAST of CmoCh01G018370 vs. NCBI nr
Match: KAG6608419.1 (hypothetical protein SDJN03_01761, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 341.3 bits (874), Expect = 5.1e-90
Identity = 176/182 (96.70%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTI---- 120
           SGPPNYNEECFYNNG SASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTI    
Sbjct: 61  SGPPNYNEECFYNNGYSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAP 179
           YGYGYGYGYGKASKINGASS EALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAP
Sbjct: 121 YGYGYGYGYGKASKINGASSNEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAP 180

[Close]

BLAST of CmoCh01G018370 vs. NCBI nr
Match: XP_023524402.1 (uncharacterized protein LOC111788307 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 174/180 (96.67%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDAS 60
           MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKD EEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKD-EEEDLSMVSDAS 60

Query: 61  SGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTI--YG 120
           SGPPNYNEECFYNNG SASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTI  YG
Sbjct: 61  SGPPNYNEECFYNNGYSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGYG 120

Query: 121 YGYGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSERSAPEE 179
           YGYGYGYGKASKINGASS EALETNAIELSQGFSATHVKRKPAVKKRF FYRSERSAPEE
Sbjct: 121 YGYGYGYGKASKINGASSNEALETNAIELSQGFSATHVKRKPAVKKRFDFYRSERSAPEE 179

[Close]

BLAST of CmoCh01G018370 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 4.6e-12
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 0


Query: 12  GGESGWTMYLDQSYTS--------GGGVGENYREIEA----KVRAEKDEEEEDLSMVSDA 71
           G ESGWT+YLDQS +S          G     R  ++     V  E++EEE+DLSM+SDA
Sbjct: 7   GCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDA 66

Query: 72  SSGPPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQHSYLDDTASSTIYGY 131
           SSGP N +EE      DS  +  +N    +K+  ++ K+      +S LDDTASS ++ +
Sbjct: 67  SSGPRNISEE------DSVKK--INIVGLKKQCKREKKRRDYEKMNSLLDDTASSPLFNF 126

Query: 132 GYGYGYGKASKINGASSKEALETNAIELSQGFSATHVKRKPAVKKRFGFYRSE 173
            +         + G   ++    + ++ SQGFSAT  + K A +++ G+   E
Sbjct: 127 PHML----QKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQCGYLHME 167

[Close]

BLAST of CmoCh01G018370 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 43/122 (35.25%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 3   DWSATHYCRGGESGWTMYLDQSYTSGGGVGENYREIEAKVRAEKDEEEEDLSMVSDASSG 62
           D+S   Y   G+SGWTMYL      G     +    +      K E +ED SMVSDASSG
Sbjct: 2   DFSDLDYSDAGDSGWTMYL------GHSSSVSLHHFDYHNGETKQEHDEDSSMVSDASSG 61

Query: 63  PPNYNEECFYNNGDSASESAMNCSREEKKKSKKGKQNGRNDQ------HSYLDDTASSTI 119
           PP Y EE  +   D   ++     + + K   K K+    +Q      +S  DDTASS  
Sbjct: 62  PPYYCEETVHE--DHLQQNTQYWCKSKSKNKNKNKKKVHEEQGYSERFNSSFDDTASSLP 115

The following BLAST results are available for this feature:

BLAST of CmoCh01G018370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	6.4e-11	33.53	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]
B6IDH8	3.1e-05	35.25	Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1	[more]

BLAST of CmoCh01G018370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLQ4	1.1e-93	100.00	uncharacterized protein LOC111446559 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FRE9	2.2e-91	98.88	uncharacterized protein LOC111446559 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IZJ4	9.7e-87	94.94	uncharacterized protein LOC111481310 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IWT5	2.0e-84	93.82	uncharacterized protein LOC111481310 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CDG6	2.0e-55	68.06	uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmoCh01G018370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941182.1	2.2e-93	100.00	uncharacterized protein LOC111446559 isoform X1 [Cucurbita moschata]	[more]
XP_022941183.1	4.6e-91	98.88	uncharacterized protein LOC111446559 isoform X2 [Cucurbita moschata]	[more]
KAG7037756.1	3.9e-90	95.16	hypothetical protein SDJN02_01387, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6608419.1	5.1e-90	96.70	hypothetical protein SDJN03_01761, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023524402.1	1.4e-87	96.67	uncharacterized protein LOC111788307 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh01G018370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	4.6e-12	33.53	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G58460.1	2.2e-06	35.25	unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..109
None	No IPR available	PANTHER	PTHR33347:SF40	SUBFAMILY NOT NAMED	coord: 1..174
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 1..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G018370.1	CmoCh01G018370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process