CmoCh01G009410 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G009410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	cationic amino acid transporter 1-like
Location	Cmo_Chr01: 5546740 .. 5547576 (-)
RNA-Seq Expression	CmoCh01G009410
Synteny	CmoCh01G009410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAACCAAACAGTGACGCCGGTGGTGGAGAAGGGATCAGAAGAAAATCTTGTGGTTGTTCGAAGCAAGATTTTCTACCAGAGGAGTCGTTTAAGAGTTGGGGAAATTACACCAAAGCGTTGAAGGCGACGCCGGCCCGGCTCTTGGATCGGCTCACGGCCAGGTCCGGGGAGCACATTGAGCTCGTCGAGATGAAGGCTCGCAACCAGCACGAGATGAAGAAGAGCCTCACATGGTGGGACCTTATGTGGTTCGGTATCGGCGCTGTCATCGGCACCGGAATATTCGTCCTCACCGGTCTTGAGACTAAGAAACACGCCGGCCCAGCTGTCGTCTTGTCTCATGTTGCCTCCGACGTCTTCGCCATGCTTTCAGTCTTCTGTTACACTGAATTTGCCGTGGAGATCCCAACAGCTGGTACGTGCATTTTTCTATTTGGTCTCTATTTGTCGTCAAAATATTATATATTTTTTTTAAATTAATTTCTATTTTGACTCTGTTATAAAAATTTATACATTTATTCTTGTATTTTTTCGATGATATATTAATTTTCTATTAATTATTTTATTTTTTTAAATTAATGAATTAAGGTTTACTAATTCTTTTCTCCCTCTTGACTATAGTTTAAATTTCATTAGAGATTCTCTCCGTCCTTTGAAAAGAATTATACCTTTTAACTTTTATAAAAAAAAATTCAAAAATATTTTTAAACTTATATAGGAATGGAGACGGTATATATATTTCTTATAGATTATCTCCCTTTTTAATCGTAAGAGTACTAATAGTAATTTATATATATTTTATAGTTAAGAATATTAATGTTAGGTGCATGA

mRNA sequence

ATGGGTCAACCAAACAGTGACGCCGGTGGTGGAGAAGGGATCAGAAGAAAATCTTGTGGTTGTTCGAAGCAAGATTTTCTACCAGAGGAGTCGTTTAAGAGTTGGGGAAATTACACCAAAGCGTTGAAGGCGACGCCGGCCCGGCTCTTGGATCGGCTCACGGCCAGGTCCGGGGAGCACATTGAGCTCGTCGAGATGAAGGCTCGCAACCAGCACGAGATGAAGAAGAGCCTCACATGGTGGGACCTTATGTGGTTCGGTATCGGCGCTGTCATCGGCACCGGAATATTCGTCCTCACCGGTCTTGAGACTAAGAAACACGCCGGCCCAGCTGTCGTCTTGTCTCATGTTGCCTCCGACGTCTTCGCCATGCTTTCAGTCTTCTGTTACACTGAATTTGCCGTGGAGATCCCAACAGCTGGTGCATGA

Coding sequence (CDS)

ATGGGTCAACCAAACAGTGACGCCGGTGGTGGAGAAGGGATCAGAAGAAAATCTTGTGGTTGTTCGAAGCAAGATTTTCTACCAGAGGAGTCGTTTAAGAGTTGGGGAAATTACACCAAAGCGTTGAAGGCGACGCCGGCCCGGCTCTTGGATCGGCTCACGGCCAGGTCCGGGGAGCACATTGAGCTCGTCGAGATGAAGGCTCGCAACCAGCACGAGATGAAGAAGAGCCTCACATGGTGGGACCTTATGTGGTTCGGTATCGGCGCTGTCATCGGCACCGGAATATTCGTCCTCACCGGTCTTGAGACTAAGAAACACGCCGGCCCAGCTGTCGTCTTGTCTCATGTTGCCTCCGACGTCTTCGCCATGCTTTCAGTCTTCTGTTACACTGAATTTGCCGTGGAGATCCCAACAGCTGGTGCATGA

Protein sequence

MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYTEFAVEIPTAGA

Homology

[Close]

BLAST of CmoCh01G009410 vs. ExPASy Swiss-Prot
Match: Q84MA5 (Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-51
Identity = 96/136 (70.59%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 6   SDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEHIELVE 65
           +  GG +G+RR+ C C+K DFLPEESF+S GNY KALK TP+R +DR+  RS +  E+ E
Sbjct: 2   ASGGGDDGLRRRGCSCTKDDFLPEESFQSMGNYLKALKETPSRFMDRIMTRSLDSDEINE 61

Query: 66  MKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAML 125
           MKAR+ HEMKK+LTWWDLMWFGIGAVIG+GIFVLTGLE + H+GPAVVLS+V S V AML
Sbjct: 62  MKARSGHEMKKTLTWWDLMWFGIGAVIGSGIFVLTGLEARNHSGPAVVLSYVVSGVSAML 121

Query: 126 SVFCYTEFAVEIPTAG 142
           SVFCYTEFAVEIP AG
Sbjct: 122 SVFCYTEFAVEIPVAG 137

[Close]

BLAST of CmoCh01G009410 vs. ExPASy Swiss-Prot
Match: O64759 (Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-38
Identity = 78/130 (60.00%), Postives = 97/130 (74.62%), Query Frame = 0


Query: 12  EGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQ 71
           EG  R     SK+DF PEESF+S+G+Y  AL  T +R  +RL +RS +  E  E+K +++
Sbjct: 2   EGEERGYWRWSKRDFFPEESFQSFGSYRAALSQTCSRFKNRLVSRSDDENERFELKKQSE 61

Query: 72  HEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYT 131
           HEMK+ LTWWDL+WFG G+VIG GIFVLTG E  + AGPA+VLS+V S + AMLSVFCYT
Sbjct: 62  HEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYT 121

Query: 132 EFAVEIPTAG 142
           EFAVEIP AG
Sbjct: 122 EFAVEIPVAG 131

[Close]

BLAST of CmoCh01G009410 vs. ExPASy Swiss-Prot
Match: Q9SHH0 (Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=CAT8 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.5e-31
Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 15  RRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQHEM 74
           RR      KQDF PE SF+S+  Y  AL AT  RL DRL +RS +  EL   +  +++ M
Sbjct: 22  RRSYWRWRKQDFFPEFSFQSFSTYKSALSATCPRLADRLLSRSSDAYELDAARRESENPM 81

Query: 75  KKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYTEFA 134
           ++ LTWWDL+W   G+V+G+G+FV+TG E +  AGPAVVLS+  S V A+LSV CY EF 
Sbjct: 82  RRCLTWWDLLWLSFGSVVGSGVFVITGQEARVGAGPAVVLSYAISGVSALLSVLCYAEFG 141

Query: 135 VEIPTAG 142
           VEIP AG
Sbjct: 142 VEIPVAG 148

[Close]

BLAST of CmoCh01G009410 vs. ExPASy Swiss-Prot
Match: Q9LZ20 (Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAT6 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.6e-20
Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 31  SFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQHEMKKSLTWWDLMWFGIGA 90
           SF S   Y  +L ATP+RL  R  + S    E+  ++A +  +M+++L W+DL+  GIG 
Sbjct: 14  SFSSLRVYLNSLSATPSRLSRRAISVSTSSDEMSRVRAVSGEQMRRTLRWYDLIGLGIGG 73

Query: 91  VIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYTEFAVEIPTAG 142
           ++G G+FV TG  ++  AGP++V+S+  + + A+LS FCYTEFAV +P AG
Sbjct: 74  MVGAGVFVTTGRASRLDAGPSIVVSYAIAGLCALLSAFCYTEFAVHLPVAG 124

[Close]

BLAST of CmoCh01G009410 vs. ExPASy Swiss-Prot
Match: Q9SQZ0 (Cationic amino acid transporter 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAT7 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.0e-20
Identity = 46/113 (40.71%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 29  EESFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQHEMKKSLTWWDLMWFGI 88
           + SF S   Y  +L  TP+R   R  + S  + E+  ++A +  +M+++L W+DL+  GI
Sbjct: 11  DTSFSSLRVYLNSLSDTPSRFSRRAVSVSTSYDEMSRVRAVSGEQMRRTLRWYDLIGLGI 70

Query: 89  GAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYTEFAVEIPTAG 142
           G +IG G+FV TG  ++ +AGP++V+S+  + + A+LS FCYTEFAV +P AG
Sbjct: 71  GGMIGAGVFVTTGRASRLYAGPSIVVSYAIAGLCALLSAFCYTEFAVHLPVAG 123

[Close]

BLAST of CmoCh01G009410 vs. ExPASy TrEMBL
Match: A0A6J1EWH9 (cationic amino acid transporter 1-like OS=Cucurbita moschata OX=3662 GN=LOC111438895 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.5e-74
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH
Sbjct: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD
Sbjct: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120

Query: 121 VFAMLSVFCYTEFAVEIPTA 141
           VFAMLSVFCYTEFAVEIPTA
Sbjct: 121 VFAMLSVFCYTEFAVEIPTA 140

[Close]

BLAST of CmoCh01G009410 vs. ExPASy TrEMBL
Match: A0A6J1I7L0 (cationic amino acid transporter 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472000 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.5e-69
Identity = 129/141 (91.49%), Postives = 134/141 (95.04%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           M QPN DAGGGEGI+R+SCGCSKQDFLPEESFKSWGNYTKALKATP RLLDRLTARSGEH
Sbjct: 1   MSQPNGDAGGGEGIKRRSCGCSKQDFLPEESFKSWGNYTKALKATPTRLLDRLTARSGEH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IEL+EMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  IELIEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVISG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIPTAG
Sbjct: 121 VSAMLSVFCYTEFAVEIPTAG 141

[Close]

BLAST of CmoCh01G009410 vs. ExPASy TrEMBL
Match: A0A6J1GTG0 (cationic amino acid transporter 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457315 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.5e-69
Identity = 130/141 (92.20%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGE IRR+SCGCSKQDFLPEESFKSWGNYT+ALKATPARLLDRLTARSG+H
Sbjct: 1   MGQPNSDAGGGEEIRRRSCGCSKQDFLPEESFKSWGNYTRALKATPARLLDRLTARSGDH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IELVEMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  IELVEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVVSG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIP AG
Sbjct: 121 VSAMLSVFCYTEFAVEIPAAG 141

[Close]

BLAST of CmoCh01G009410 vs. ExPASy TrEMBL
Match: A0A6J1GVW5 (cationic amino acid transporter 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457315 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.5e-69
Identity = 130/141 (92.20%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGE IRR+SCGCSKQDFLPEESFKSWGNYT+ALKATPARLLDRLTARSG+H
Sbjct: 1   MGQPNSDAGGGEEIRRRSCGCSKQDFLPEESFKSWGNYTRALKATPARLLDRLTARSGDH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IELVEMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  IELVEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVVSG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIP AG
Sbjct: 121 VSAMLSVFCYTEFAVEIPAAG 141

[Close]

BLAST of CmoCh01G009410 vs. ExPASy TrEMBL
Match: A0A6J1K040 (cationic amino acid transporter 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490398 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.1e-68
Identity = 130/141 (92.20%), Postives = 134/141 (95.04%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGE IRR+SCGCSKQDFLPEESFKSWGNYT+ALKATPARLLDRLTARSGEH
Sbjct: 1   MGQPNSDAGGGEEIRRRSCGCSKQDFLPEESFKSWGNYTEALKATPARLLDRLTARSGEH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
            ELVEMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  TELVEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVVSG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIP AG
Sbjct: 121 VSAMLSVFCYTEFAVEIPAAG 141

[Close]

BLAST of CmoCh01G009410 vs. NCBI nr
Match: XP_022932491.1 (cationic amino acid transporter 1-like [Cucurbita moschata])

HSP 1 Score: 288.5 bits (737), Expect = 3.1e-74
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH
Sbjct: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD
Sbjct: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120

Query: 121 VFAMLSVFCYTEFAVEIPTA 141
           VFAMLSVFCYTEFAVEIPTA
Sbjct: 121 VFAMLSVFCYTEFAVEIPTA 140

[Close]

BLAST of CmoCh01G009410 vs. NCBI nr
Match: XP_023541264.1 (cationic amino acid transporter 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 8.8e-69
Identity = 130/141 (92.20%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGEGIR++SCGCSKQDFLPEESFKSWGNY KALKATPARLLDRLTARSG+H
Sbjct: 1   MGQPNSDAGGGEGIRKRSCGCSKQDFLPEESFKSWGNYAKALKATPARLLDRLTARSGDH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IELVEMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  IELVEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVVSG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIP AG
Sbjct: 121 VSAMLSVFCYTEFAVEIPAAG 141

[Close]

BLAST of CmoCh01G009410 vs. NCBI nr
Match: XP_022955316.1 (cationic amino acid transporter 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 130/141 (92.20%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGE IRR+SCGCSKQDFLPEESFKSWGNYT+ALKATPARLLDRLTARSG+H
Sbjct: 1   MGQPNSDAGGGEEIRRRSCGCSKQDFLPEESFKSWGNYTRALKATPARLLDRLTARSGDH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IELVEMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  IELVEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVVSG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIP AG
Sbjct: 121 VSAMLSVFCYTEFAVEIPAAG 141

[Close]

BLAST of CmoCh01G009410 vs. NCBI nr
Match: XP_022955314.1 (cationic amino acid transporter 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 130/141 (92.20%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           MGQPNSDAGGGE IRR+SCGCSKQDFLPEESFKSWGNYT+ALKATPARLLDRLTARSG+H
Sbjct: 1   MGQPNSDAGGGEEIRRRSCGCSKQDFLPEESFKSWGNYTRALKATPARLLDRLTARSGDH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IELVEMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  IELVEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVVSG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIP AG
Sbjct: 121 VSAMLSVFCYTEFAVEIPAAG 141

[Close]

BLAST of CmoCh01G009410 vs. NCBI nr
Match: XP_022973462.1 (cationic amino acid transporter 1-like [Cucurbita maxima])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 129/141 (91.49%), Postives = 134/141 (95.04%), Query Frame = 0


Query: 1   MGQPNSDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEH 60
           M QPN DAGGGEGI+R+SCGCSKQDFLPEESFKSWGNYTKALKATP RLLDRLTARSGEH
Sbjct: 1   MSQPNGDAGGGEGIKRRSCGCSKQDFLPEESFKSWGNYTKALKATPTRLLDRLTARSGEH 60

Query: 61  IELVEMKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASD 120
           IEL+EMKAR+QHEMKKSLTWWDLMWFGIGAVIG GIFVLTGLETKKHAGPAVVLS+V S 
Sbjct: 61  IELIEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAVVLSYVISG 120

Query: 121 VFAMLSVFCYTEFAVEIPTAG 142
           V AMLSVFCYTEFAVEIPTAG
Sbjct: 121 VSAMLSVFCYTEFAVEIPTAG 141

[Close]

BLAST of CmoCh01G009410 vs. TAIR 10
Match: AT4G21120.1 (amino acid transporter 1 )

HSP 1 Score: 204.1 bits (518), Expect = 7.3e-53
Identity = 96/136 (70.59%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 6   SDAGGGEGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEHIELVE 65
           +  GG +G+RR+ C C+K DFLPEESF+S GNY KALK TP+R +DR+  RS +  E+ E
Sbjct: 2   ASGGGDDGLRRRGCSCTKDDFLPEESFQSMGNYLKALKETPSRFMDRIMTRSLDSDEINE 61

Query: 66  MKARNQHEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAML 125
           MKAR+ HEMKK+LTWWDLMWFGIGAVIG+GIFVLTGLE + H+GPAVVLS+V S V AML
Sbjct: 62  MKARSGHEMKKTLTWWDLMWFGIGAVIGSGIFVLTGLEARNHSGPAVVLSYVVSGVSAML 121

Query: 126 SVFCYTEFAVEIPTAG 142
           SVFCYTEFAVEIP AG
Sbjct: 122 SVFCYTEFAVEIPVAG 137

[Close]

BLAST of CmoCh01G009410 vs. TAIR 10
Match: AT2G34960.1 (cationic amino acid transporter 5 )

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-39
Identity = 78/130 (60.00%), Postives = 97/130 (74.62%), Query Frame = 0


Query: 12  EGIRRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQ 71
           EG  R     SK+DF PEESF+S+G+Y  AL  T +R  +RL +RS +  E  E+K +++
Sbjct: 2   EGEERGYWRWSKRDFFPEESFQSFGSYRAALSQTCSRFKNRLVSRSDDENERFELKKQSE 61

Query: 72  HEMKKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYT 131
           HEMK+ LTWWDL+WFG G+VIG GIFVLTG E  + AGPA+VLS+V S + AMLSVFCYT
Sbjct: 62  HEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYT 121

Query: 132 EFAVEIPTAG 142
           EFAVEIP AG
Sbjct: 122 EFAVEIPVAG 131

[Close]

BLAST of CmoCh01G009410 vs. TAIR 10
Match: AT1G17120.1 (cationic amino acid transporter 8 )

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-32
Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 15  RRKSCGCSKQDFLPEESFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQHEM 74
           RR      KQDF PE SF+S+  Y  AL AT  RL DRL +RS +  EL   +  +++ M
Sbjct: 22  RRSYWRWRKQDFFPEFSFQSFSTYKSALSATCPRLADRLLSRSSDAYELDAARRESENPM 81

Query: 75  KKSLTWWDLMWFGIGAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYTEFA 134
           ++ LTWWDL+W   G+V+G+G+FV+TG E +  AGPAVVLS+  S V A+LSV CY EF 
Sbjct: 82  RRCLTWWDLLWLSFGSVVGSGVFVITGQEARVGAGPAVVLSYAISGVSALLSVLCYAEFG 141

Query: 135 VEIPTAG 142
           VEIP AG
Sbjct: 142 VEIPVAG 148

[Close]

BLAST of CmoCh01G009410 vs. TAIR 10
Match: AT5G04770.1 (cationic amino acid transporter 6 )

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21
Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 31  SFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQHEMKKSLTWWDLMWFGIGA 90
           SF S   Y  +L ATP+RL  R  + S    E+  ++A +  +M+++L W+DL+  GIG 
Sbjct: 14  SFSSLRVYLNSLSATPSRLSRRAISVSTSSDEMSRVRAVSGEQMRRTLRWYDLIGLGIGG 73

Query: 91  VIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYTEFAVEIPTAG 142
           ++G G+FV TG  ++  AGP++V+S+  + + A+LS FCYTEFAV +P AG
Sbjct: 74  MVGAGVFVTTGRASRLDAGPSIVVSYAIAGLCALLSAFCYTEFAVHLPVAG 124

[Close]

BLAST of CmoCh01G009410 vs. TAIR 10
Match: AT3G10600.1 (cationic amino acid transporter 7 )

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-21
Identity = 46/113 (40.71%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 29  EESFKSWGNYTKALKATPARLLDRLTARSGEHIELVEMKARNQHEMKKSLTWWDLMWFGI 88
           + SF S   Y  +L  TP+R   R  + S  + E+  ++A +  +M+++L W+DL+  GI
Sbjct: 11  DTSFSSLRVYLNSLSDTPSRFSRRAVSVSTSYDEMSRVRAVSGEQMRRTLRWYDLIGLGI 70

Query: 89  GAVIGTGIFVLTGLETKKHAGPAVVLSHVASDVFAMLSVFCYTEFAVEIPTAG 142
           G +IG G+FV TG  ++ +AGP++V+S+  + + A+LS FCYTEFAV +P AG
Sbjct: 71  GGMIGAGVFVTTGRASRLYAGPSIVVSYAIAGLCALLSAFCYTEFAVHLPVAG 123

The following BLAST results are available for this feature:

BLAST of CmoCh01G009410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MA5	1.0e-51	70.59	Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 S...	[more]
O64759	2.2e-38	60.00	Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 S...	[more]
Q9SHH0	4.5e-31	51.97	Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LZ20	4.6e-20	42.34	Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9SQZ0	6.0e-20	40.71	Cationic amino acid transporter 7, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CmoCh01G009410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWH9	1.5e-74	100.00	cationic amino acid transporter 1-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1I7L0	9.5e-69	91.49	cationic amino acid transporter 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114720...	[more]
A0A6J1GTG0	9.5e-69	92.20	cationic amino acid transporter 1-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1GVW5	9.5e-69	92.20	cationic amino acid transporter 1-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K040	2.1e-68	92.20	cationic amino acid transporter 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114903...	[more]

BLAST of CmoCh01G009410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932491.1	3.1e-74	100.00	cationic amino acid transporter 1-like [Cucurbita moschata]	[more]
XP_023541264.1	8.8e-69	92.20	cationic amino acid transporter 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955316.1	2.0e-68	92.20	cationic amino acid transporter 1-like isoform X2 [Cucurbita moschata]	[more]
XP_022955314.1	2.0e-68	92.20	cationic amino acid transporter 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022973462.1	2.0e-68	91.49	cationic amino acid transporter 1-like [Cucurbita maxima]	[more]

BLAST of CmoCh01G009410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21120.1	7.3e-53	70.59	amino acid transporter 1	[more]
AT2G34960.1	1.6e-39	60.00	cationic amino acid transporter 5	[more]
AT1G17120.1	3.2e-32	51.97	cationic amino acid transporter 8	[more]
AT5G04770.1	3.3e-21	42.34	cationic amino acid transporter 6	[more]
AT3G10600.1	4.3e-21	40.71	cationic amino acid transporter 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1740.10	Amino acid/polyamine transporter I	coord: 72..142 e-value: 5.5E-15 score: 56.9
None	No IPR available	PANTHER	PTHR43243	INNER MEMBRANE TRANSPORTER YGJI-RELATED	coord: 14..141
None	No IPR available	PANTHER	PTHR43243:SF1	CATIONIC AMINO ACID TRANSPORTER 1	coord: 14..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G009410.1	CmoCh01G009410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity