CmoCh01G008880 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G008880
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionAnkyrin repeat-containing protein
LocationCmo_Chr01: 4846164 .. 4847168 (+)
RNA-Seq ExpressionCmoCh01G008880
SyntenyCmoCh01G008880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAGCCATGGCAAGTAGGCTTGAGGAAGAAGCACCCAACCAAATTGGAAATGGTGGAGAAGATCAGAACAAGGAGGAGACTTGGCAGAAGAGAGATAGAGAGTATCTGTTGATAGTAGTAACATTCATGGCAACCGTTGCTTTCCAAGCCGGGGTGAGCCCTCCTGGTGGTGTCTGGCAACAAGACGATAAGAACTCGAGGTATGTAACAATAGAGAGAAGAGATATAAGAAAAAAAAAATCTTATAAATACTCATAAGATGTATGCTCTATTAATATCGATGAATAGAAATGAAAATTATTGTGCTTAATGTTAAATTTTTTTGTGACTAAATTATGTGGGCGCATAAGTATTGTAGCTGGGACATCGATAATGGCCACAAAATTCCCAGCTGAGTTCACCACATTCGTCGTTGGCGTAACAGTGTGCATGATAGTTTCAATGTTGCAATTTATAGTGCTGTTTGTTGAGTTGCCAAGCGACACACCCTCACTTTCGAGGAAATATCTGTACTACACTTTGTTCTTCGCATTAGGCAGCATGCTCTCGTCTTATGTATCATCGGTAAAAGCTTATACGCCGGAGTCGATGAGAACCCAGACCATCACTGTTCTTGCTCTTACTATTGGAATTGGTGTTGTTTTAGTGGGGATTTCATTGTTCAAACAGAAGATACAGCAGAAATGTATGCGTTAACTGTTCAGTGGACAATATCATGAGAGCTTAAGCTCAAAGTGGACAATATCATACCATTGTGGATAGTTGTGTTCATCCAACACAAAGCAGGTCTCGAAGAACAAGCACCCCAACACATGGCCCAAAGCCTATGTGTTTGTCAAACCAGGTTCTTGAAAAAATTCTTAGGGCGAGCTACAACCTATCTAACTTCACCTTCTTACCTTGGTTCTTGCACAAATTCTTCAAGAATGGATTAAAGCTCTTGTATTATCATATGTATGAGAATTTGGCACCTACGCATATGTATTCAAACACATTGAAGGCAC

mRNA sequence

CTCAGCCATGGCAAGTAGGCTTGAGGAAGAAGCACCCAACCAAATTGGAAATGGTGGAGAAGATCAGAACAAGGAGGAGACTTGGCAGAAGAGAGATAGAGAGTATCTGTTGATAGTAGTAACATTCATGGCAACCGTTGCTTTCCAAGCCGGGGTGAGCCCTCCTGGTGGTGTCTGGCAACAAGACGATAAGAACTCGAGTATTGTAGCTGGGACATCGATAATGGCCACAAAATTCCCAGCTGAGTTCACCACATTCGTCGTTGGCGTAACAGTGTGCATGATAGTTTCAATGTTGCAATTTATAGTGCTGTTTGTTGAGTTGCCAAGCGACACACCCTCACTTTCGAGGAAATATCTGTACTACACTTTGTTCTTCGCATTAGGCAGCATGCTCTCGTCTTATGTATCATCGGTAAAAGCTTATACGCCGGAGTCGATGAGAACCCAGACCATCACTGTTCTTGCTCTTACTATTGGAATTGGTGTTGTTTTAGTGGGGATTTCATTGTTCAAACAGAAGATACAGCAGAAATGTATGCGTTAACTGTTCAGTGGACAATATCATGAGAGCTTAAGCTCAAAGTGGACAATATCATACCATTGTGGATAGTTGTGTTCATCCAACACAAAGCAGGTCTCGAAGAACAAGCACCCCAACACATGGCCCAAAGCCTATGTGTTTGTCAAACCAGGTTCTTGAAAAAATTCTTAGGGCGAGCTACAACCTATCTAACTTCACCTTCTTACCTTGGTTCTTGCACAAATTCTTCAAGAATGGATTAAAGCTCTTGTATTATCATATGTATGAGAATTTGGCACCTACGCATATGTATTCAAACACATTGAAGGCAC

Coding sequence (CDS)

ATGGCAAGTAGGCTTGAGGAAGAAGCACCCAACCAAATTGGAAATGGTGGAGAAGATCAGAACAAGGAGGAGACTTGGCAGAAGAGAGATAGAGAGTATCTGTTGATAGTAGTAACATTCATGGCAACCGTTGCTTTCCAAGCCGGGGTGAGCCCTCCTGGTGGTGTCTGGCAACAAGACGATAAGAACTCGAGTATTGTAGCTGGGACATCGATAATGGCCACAAAATTCCCAGCTGAGTTCACCACATTCGTCGTTGGCGTAACAGTGTGCATGATAGTTTCAATGTTGCAATTTATAGTGCTGTTTGTTGAGTTGCCAAGCGACACACCCTCACTTTCGAGGAAATATCTGTACTACACTTTGTTCTTCGCATTAGGCAGCATGCTCTCGTCTTATGTATCATCGGTAAAAGCTTATACGCCGGAGTCGATGAGAACCCAGACCATCACTGTTCTTGCTCTTACTATTGGAATTGGTGTTGTTTTAGTGGGGATTTCATTGTTCAAACAGAAGATACAGCAGAAATGTATGCGTTAA

Protein sequence

MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
Homology
BLAST of CmoCh01G008880 vs. ExPASy TrEMBL
Match: A0A6J1GBC1 (uncharacterized protein LOC111452618 OS=Cucurbita moschata OX=3662 GN=LOC111452618 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
           MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD
Sbjct: 14  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 73

Query: 61  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120
           DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY
Sbjct: 74  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 133

Query: 121 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR 180
           TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
Sbjct: 134 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR 192

BLAST of CmoCh01G008880 vs. ExPASy TrEMBL
Match: A0A6J1I8P6 (uncharacterized protein LOC111471995 OS=Cucurbita maxima OX=3661 GN=LOC111471995 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.4e-79
Identity = 159/176 (90.34%), Postives = 166/176 (94.32%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
           MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQD
Sbjct: 1   MASRLEEEAPNQIGNGREDQNKEETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQD 60

Query: 61  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120
           DKNSSIVAGTSIMATKFPAEFTTF+VGVTVCMIVSMLQFIVL  ELPSDTPSLSRKYLYY
Sbjct: 61  DKNSSIVAGTSIMATKFPAEFTTFIVGVTVCMIVSMLQFIVLLNELPSDTPSLSRKYLYY 120

Query: 121 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK 177
           TLFFALGSMLSSYVSSVKAYTPE M  + +TVL  +IG GVVLVGISLFKQKI++K
Sbjct: 121 TLFFALGSMLSSYVSSVKAYTPEPMIPRAVTVLVFSIGSGVVLVGISLFKQKIEKK 176

BLAST of CmoCh01G008880 vs. ExPASy TrEMBL
Match: A0A5A7VFP9 (Ankyrin repeat-containing protein ITN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00240 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.2e-25
Identity = 72/173 (41.62%), Postives = 110/173 (63.58%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQ-NKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQ 60
           MASR+EE+    I    E+Q + E++WQK D E L++++TF+ T++FQAG +PPGGVWQ 
Sbjct: 1   MASRVEEDEETTI--AAENQTSSEKSWQKTDIELLMVIITFIGTISFQAGTNPPGGVWQD 60

Query: 61  DDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLY 120
             +     AG SIMA+K P++F  F+VGV+  M++S  Q + L  ELP +  S SR ++Y
Sbjct: 61  GSE-----AGKSIMASKNPSQFLVFIVGVSTAMVLSAAQLMTLMNELPYNKLSDSRNFIY 120

Query: 121 YTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQK 173
            +L F + ++  +Y SSV A TP SM  +  T L   + +G V++ I ++ QK
Sbjct: 121 CSLGFIITALGFAYGSSVTALTPSSMIDEVKTALLTVLAVGAVVIAIVIYIQK 166

BLAST of CmoCh01G008880 vs. ExPASy TrEMBL
Match: A0A0A0KFJ5 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363010 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.1e-24
Identity = 72/172 (41.86%), Postives = 107/172 (62.21%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
           MASR+EE+            + E+T QK D E L++++TF+ T++FQAG +PPGGVWQ+ 
Sbjct: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60

Query: 61  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120
            +     AG SIMA+K P++F  F+VGVTV M++S  Q + L  ELP +  S SR ++Y 
Sbjct: 61  PE-----AGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYC 120

Query: 121 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQK 173
           +L   + ++  +Y SS+ A TP SM  +   VL   + IGVV+V I ++ QK
Sbjct: 121 SLGITITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQK 167

BLAST of CmoCh01G008880 vs. ExPASy TrEMBL
Match: A0A0A0KGU1 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.0e-24
Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 0

Query: 17  GEDQNK---EETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIM 76
           G ++NK      W + D ++L++V TF+ATVAFQ G +PPGGVWQ+DDK     AG SIM
Sbjct: 23  GHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIM 82

Query: 77  ATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVE---LPSDTPSLSRKYLYYTLFFALGSML 136
           ATK P++F  F+V +T C + S +QF VLF++   + +   S SR  LY T+  A+ SM 
Sbjct: 83  ATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMG 142

Query: 137 SSYVSSVKAYTPESMRTQTITVLALT-IGIGVVLVGISLFKQ 172
            +Y  SV+AYTP+S       +  +T +G  + L  IS++ Q
Sbjct: 143 FAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184

BLAST of CmoCh01G008880 vs. NCBI nr
Match: XP_022949196.1 (uncharacterized protein LOC111452618 [Cucurbita moschata])

HSP 1 Score: 341.3 bits (874), Expect = 5.1e-90
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
           MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD
Sbjct: 14  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 73

Query: 61  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120
           DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY
Sbjct: 74  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 133

Query: 121 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR 180
           TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
Sbjct: 134 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR 192

BLAST of CmoCh01G008880 vs. NCBI nr
Match: KAG6607507.1 (hypothetical protein SDJN03_00849, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.4 bits (825), Expect = 2.5e-84
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
           MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD
Sbjct: 1   MASRLEEEAPNQIGNGREDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60

Query: 61  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120
           DKNSS+VAGTSIMATKFPAEFT F+VGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY
Sbjct: 61  DKNSSVVAGTSIMATKFPAEFTIFIVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120

Query: 121 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR 180
           TLFFALGSMLSSYVSSVKAYTP+SMR + ITVLALTIGIG+V VGISLFK+KIQQ+CMR
Sbjct: 121 TLFFALGSMLSSYVSSVKAYTPKSMRPRAITVLALTIGIGLVFVGISLFKRKIQQRCMR 179

BLAST of CmoCh01G008880 vs. NCBI nr
Match: XP_023523646.1 (uncharacterized protein LOC111787821 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 159/176 (90.34%), Postives = 165/176 (93.75%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
           MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQD
Sbjct: 1   MASRLEEEAPNQIGNGREDQNKEETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQD 60

Query: 61  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120
           DKNSSIVAGTSIMATKFP EFTTF+VGVTVCMIVSMLQF VL  ELPSDTPSLSRKYLYY
Sbjct: 61  DKNSSIVAGTSIMATKFPVEFTTFIVGVTVCMIVSMLQFTVLLNELPSDTPSLSRKYLYY 120

Query: 121 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK 177
           TLFFALGSMLSSYVSSVKAYTPE M  + +TVLA +IG G+VLVGISLFKQKIQQK
Sbjct: 121 TLFFALGSMLSSYVSSVKAYTPEPMIPRAVTVLAFSIGTGIVLVGISLFKQKIQQK 176

BLAST of CmoCh01G008880 vs. NCBI nr
Match: XP_022973456.1 (uncharacterized protein LOC111471995 [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 7.0e-79
Identity = 159/176 (90.34%), Postives = 166/176 (94.32%), Query Frame = 0

Query: 1   MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
           MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQD
Sbjct: 1   MASRLEEEAPNQIGNGREDQNKEETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQD 60

Query: 61  DKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYY 120
           DKNSSIVAGTSIMATKFPAEFTTF+VGVTVCMIVSMLQFIVL  ELPSDTPSLSRKYLYY
Sbjct: 61  DKNSSIVAGTSIMATKFPAEFTTFIVGVTVCMIVSMLQFIVLLNELPSDTPSLSRKYLYY 120

Query: 121 TLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK 177
           TLFFALGSMLSSYVSSVKAYTPE M  + +TVL  +IG GVVLVGISLFKQKI++K
Sbjct: 121 TLFFALGSMLSSYVSSVKAYTPEPMIPRAVTVLVFSIGSGVVLVGISLFKQKIEKK 176

BLAST of CmoCh01G008880 vs. NCBI nr
Match: XP_023523647.1 (uncharacterized protein LOC111787821 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.1 bits (331), Expect = 4.7e-27
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0

Query: 1  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQD 60
          MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQD
Sbjct: 1  MASRLEEEAPNQIGNGREDQNKEETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQD 60

Query: 61 DKNSS 66
          DKNSS
Sbjct: 61 DKNSS 65

BLAST of CmoCh01G008880 vs. TAIR 10
Match: AT1G34050.1 (Ankyrin repeat family protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05
Identity = 38/130 (29.23%), Postives = 61/130 (46.92%), Query Frame = 0

Query: 31  REYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTV 90
           R  + IV   +A+VAF  G++PPGGV+Q+        AG ++        F  F +   +
Sbjct: 396 RNTITIVAVLIASVAFTCGINPPGGVYQEGPYKGKSTAGRTL-------AFQVFSISNNI 455

Query: 91  CMIVSMLQFIVLFVELPSDTPSLSR--KYLYYTLFFALGSMLSSYVSSVKAYTP--ESMR 150
            +  S+   I+L   +P  T  L    K  +  L+ A+ SM  +YVS+     P  E  R
Sbjct: 456 ALFTSLCIVILLVSIIPYRTRPLKNFLKLTHRILWVAVASMALAYVSAASIIIPHVEGKR 515

Query: 151 TQTITVLALT 157
               TVL+++
Sbjct: 516 WLFTTVLSIS 518

BLAST of CmoCh01G008880 vs. TAIR 10
Match: AT5G51160.1 (Ankyrin repeat family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.6e-04
Identity = 38/139 (27.34%), Postives = 64/139 (46.04%), Query Frame = 0

Query: 31  REYLLIVVTFMATVAFQAGVSPPGGVWQQD-----DKNSSIV---------AGTSIMATK 90
           R  LL+V + +AT  FQA ++PPGG WQ        +N++ V         AG SIM T 
Sbjct: 271 RSALLVVASLVATATFQASLTPPGGTWQDSSIPAVSQNTTNVNTTNQQAHTAGQSIMGTF 330

Query: 91  FPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSS 150
               FT FV   T+   VS+    +L +  P          L + L   + +M  S+ ++
Sbjct: 331 NGVAFTLFVFFNTIGFSVSLSMLNILTLGFP----------LRFQLQICMIAMYFSHNTT 390

Query: 151 VKAYTPESMRTQTITVLAL 156
           + +  P+ ++   I + ++
Sbjct: 391 MASIAPDHVKLYCILITSI 399

BLAST of CmoCh01G008880 vs. TAIR 10
Match: AT5G50140.1 (Ankyrin repeat family protein )

HSP 1 Score: 41.6 bits (96), Expect = 7.8e-04
Identity = 43/155 (27.74%), Postives = 73/155 (47.10%), Query Frame = 0

Query: 18  EDQNKEETWQ----KRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIM 77
           E + KE+  Q    +  R  + +V   +A+V F  G++PPGGV+Q         AG ++ 
Sbjct: 347 ESRIKEKEMQSEALQNARNTITVVAVLIASVTFTCGLNPPGGVYQDGHFIGKATAGGTV- 406

Query: 78  ATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRKYLYYT---LFFALGSML 137
                  F  F V  ++ +  S+   I+L   +P  T SL + +L  T   ++ A+ +M 
Sbjct: 407 ------AFKVFSVSNSIALFTSLCIVILLLSIIPFRTKSL-KTFLIITHKMIWLAVIAMA 466

Query: 138 SSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVG 166
           S+YV+      P S   +   VL  T+ I  V++G
Sbjct: 467 SAYVAGTCVTLPHSRGNK--WVLKATLVIACVMLG 491

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GBC12.5e-90100.00uncharacterized protein LOC111452618 OS=Cucurbita moschata OX=3662 GN=LOC1114526... [more]
A0A6J1I8P63.4e-7990.34uncharacterized protein LOC111471995 OS=Cucurbita maxima OX=3661 GN=LOC111471995... [more]
A0A5A7VFP96.2e-2541.62Ankyrin repeat-containing protein ITN1-like OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KFJ53.1e-2441.86PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363010 PE=4 SV... [more]
A0A0A0KGU14.0e-2442.59PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV... [more]
Match NameE-valueIdentityDescription
XP_022949196.15.1e-90100.00uncharacterized protein LOC111452618 [Cucurbita moschata][more]
KAG6607507.12.5e-8493.30hypothetical protein SDJN03_00849, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023523646.14.1e-7990.34uncharacterized protein LOC111787821 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022973456.17.0e-7990.34uncharacterized protein LOC111471995 [Cucurbita maxima][more]
XP_023523647.14.7e-2796.92uncharacterized protein LOC111787821 isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G34050.12.4e-0529.23Ankyrin repeat family protein [more]
AT5G51160.14.6e-0427.34Ankyrin repeat family protein [more]
AT5G50140.17.8e-0427.74Ankyrin repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026961PGG domainPFAMPF13962PGGcoord: 25..137
e-value: 4.9E-21
score: 74.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G008880.1CmoCh01G008880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane