CmoCh01G003620 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G003620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cmo_Chr01: 1760893 .. 1764078 (-)
RNA-Seq Expression	CmoCh01G003620
Synteny	CmoCh01G003620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATACCAAATTCCGGCAACCCCAATCTTGGATTTCTCGACGGCTCCCTGAAAGGAACGAAAATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGCTTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCACTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCCGTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCAGTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCTGCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTGGGCTCTCAGGTAATCTCTCCAACAATTTCCTGATTTATGAACTTCCTGGTCCATTTCTTTGATTTTTGTTTGAATTTTGTGGTGCTTTTTAGTGGGTTTGAATTATGAGGTTTTGGTTTCTGGCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGGTTCTGTCACTGCTGGTATTTTCTGCATCATTTTACTTTTATCATGAAATCCTTGATTATTTTTTTTTTTCTGACTTATGCATTATAGTTCTGTTCTAAAGTAGTTGGATTGGAAGGATACTCTCGTAGAATCTTTATGGTTCAAACCTGCTTCCCTGCATTCTTTTATAATGGTTTTAGTTTTGAAATCAAATGAGTTTCTTATTGCTCCAATGCGCTCGTATGTAGAATGGAAATTGCATAGTTCAACTTTTTTTACTTAAATGAGTTCAACTGCCTTCTGTGTTGATCAAGTTCAGATAATACAACAACAATTTCTCTTTCAGCCTTTCACCCCCTTTGCATTGAATGTAGTTCTCAATCCAAGATAAACATATTTCAAAATTGTGGAATCATTGAAACCTTTAAGATGCAGTGTCGTCGGAGATTGAGAAAAAATCAAGTTACATGGGTTTTGACTTGATTATTCTCACTTTGGAAGTAGCTTGGGAACTGCCATATTTGAGTAAGGATCATAATTCGTCTAGTTGTGAGGCAAGAGTGTCTGTTATTGGTTGTGTTTTTGTATTTTGTTTTGTGAATGAAATATTATGAGACCAATTCATGTGTTCGAATCCGCGAACCGCTTGATATGCTTAGTTTTCAAAAATATTCTTATTTATCAGGTGTTCAGTTGGCTAGTTTTTACTTTTTAGCACCATGGACGTAACTTTTGCCATCGACCAAATAAAAATTATTGTATGTGGTGTGGTATTTATGGGGCAAGAGCTTGGATGATATGCGTATAACCTGATTCAAGTTCATAACAGATTCTCGGTGTGGGGCTGGTTTCATTTCTCCAACGGTCTTAAGAAAGATGTTATAAAGAAAAAATTTGTAACATCCATTCTATAGCCAGTCCAGTTTCCTCCCGGATGCCTCGGTATTCATTTGTAGTAACTTTGGCAGATGAAACCACGTACCTACCGAAGCAGTTGTCTATTCCATTGTTTCTCATAACTAAAAACTGCCCTTCTTTTGTTTGTTTATATTATGTTCCTTGGTCTCTTCATTCTTCAATCATATAAAGGGCTTCTCAAGTACATCTTTGGAATTCCACGTTTTTTTTTTCTTTTGGGCTATCTCTAATGTTGAAGGGTGTCATTTCAATCCATGTTTGTTGCTCGACATTTTTTTTGGCTGCATGTAGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGGAGAGTGAGTAGTAGACTATTATTTTCTGTGCTTTGATGTCAAGTGAATGCCATTTTGTCCACCGTGATTGTAATTTTTGTTTCACCTTCCAATTAAGTAATTCCTGATTGTTTCATAATTTAGTTGTTATGAACTCGATTTATGTGTGTGAACTTGTATATGAGGTCGCAACGTTTTGGTGTTATGCATATAAGAGCAGCATGGAATCAAATACAGGAAACTTCCCCAAAATTTATACCTATTGACATTGCCTGTTGATCTATGTGATAAGTTGATTTGAGCTTCCACTTATGGTCTCCCCGAATCGCTTTGTAATTCGCTGGTTAACCCGTCCATGCCAGGCGACAGATATGAGCATCCGGCTACGAGAGATGGCGTATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAGGAAAACCATTGGAGCAGGTTTGCGTCTACATTGTGTCTTTAACTATCTATCTGGTTCTCAGTTTCTTGCTCGAACCCTCTTGATGTTTACGAGTTTTCGTTTGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGAAGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCAGGACTCATTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTATGGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAACCAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGCGCAGTCCCCAGCCAGAAACAGAAGAACCAAGTCCTAAATGACAGGACACCCGCCCTGTTCTTCCATTGTTGTATCCTACTTTGTTCTTTCCATTCTCAAATAGCTCCTTCTCTGTAAGATCTTAAAGGTTATTATTACCAATCAGTTAAAACCAGTTATAGGTTTTGGAAAATTCAAGAGTCCAAGCAGTCGATATCTGAATCCATGTCGAAACCTCAGTACGACATTAACGGTGAGACTTAGTTTTGTAAAGGCTCAGATCCACCGCTAGCAGATATTGTCCTCTTTAGGCTTTCCTGTTCGGGTTTCCCCTTGAGACTTTATAAAATGTGTCTGTTAGGGGAAGGTTTCTACACCTTTATAAATGGTGTTTTGTTCTCCTCACTAACTAATATGGGACATCACAATCCACCCCCTTCGGGGCCCAACGTTCTTAC

mRNA sequence

GATACCAAATTCCGGCAACCCCAATCTTGGATTTCTCGACGGCTCCCTGAAAGGAACGAAAATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGCTTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCACTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCCGTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCAGTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCTGCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGGTTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGGAGAGCGACAGATATGAGCATCCGGCTACGAGAGATGGCGTATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAGGAAAACCATTGGAGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGAAGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCAGGACTCATTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTATGGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAACCAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGCGCAGTCCCCAGCCAGAAACAGAAGAACCAAGTCCTAAATGACAGGACACCCGCCCTGTTCTTCCATTGTTGTATCCTACTTTGTTCTTTCCATTCTCAAATAGCTCCTTCTCTGTAAGATCTTAAAGGTTATTATTACCAATCAGTTAAAACCAGTTATAGGTTTTGGAAAATTCAAGAGTCCAAGCAGTCGATATCTGAATCCATGTCGAAACCTCAGTACGACATTAACGGTGAGACTTAGTTTTGTAAAGGCTCAGATCCACCGCTAGCAGATATTGTCCTCTTTAGGCTTTCCTGTTCGGGTTTCCCCTTGAGACTTTATAAAATGTGTCTGTTAGGGGAAGGTTTCTACACCTTTATAAATGGTGTTTTGTTCTCCTCACTAACTAATATGGGACATCACAATCCACCCCCTTCGGGGCCCAACGTTCTTAC

Coding sequence (CDS)

ATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGCTTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCACTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCCGTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCAGTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCTGCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGGTTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGGAGAGCGACAGATATGAGCATCCGGCTACGAGAGATGGCGTATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAGGAAAACCATTGGAGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGAAGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCAGGACTCATTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTATGGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAACCAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGCGCAGTCCCCAGCCAGAAACAGAAGAACCAAGTCCTAAATGA

Protein sequence

MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

Homology

[Close]

BLAST of CmoCh01G003620 vs. ExPASy Swiss-Prot
Match: Q9SXJ6 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 3.8e-113
Identity = 205/273 (75.09%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 49  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLR 108
           RI K+     V++S+S S P R+TLSSNWDV      S A +P+ LP FEELDTTNMLLR
Sbjct: 33  RIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLR 92

Query: 109 QRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKA 168
           QRI+FLGSQVDDMTAD +ISQLL LDAED  +DI L INSPGGS+TAGMGIYDAMK CKA
Sbjct: 93  QRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKA 152

Query: 169 DVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYH 228
           DVSTVC+GLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGG+AT+MSIR+REM YH
Sbjct: 153 DVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYH 212

Query: 229 KIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANP 288
           KIKLNKI SRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI +  P
Sbjct: 213 KIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTP 272

Query: 289 PPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY 318
           PPKT+VWDLWK+EG++K   NLPSE  + QNGY
Sbjct: 273 PPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of CmoCh01G003620 vs. ExPASy Swiss-Prot
Match: Q3MFR5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.5e-58
Identity = 116/187 (62.03%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 97  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 156
           D  + LLR+RIIFLG QVD   A+ I++QLLFLDAEDP KDI L INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 157 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 216
           D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ R+MIHQPLG A G+ATD+ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 217 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLI 276
           + RE+ YHK +LN  L+  TG+P+E+I  DT+RD FM+P EA++YGLID+VID    G  
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHAAG-S 197

Query: 277 APIAEAN 284
            P+A  N
Sbjct: 198 RPVAMVN 203

[Close]

BLAST of CmoCh01G003620 vs. ExPASy Swiss-Prot
Match: Q8YXH5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.9e-58
Identity = 112/173 (64.74%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 97  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 156
           D  + LLR+RI+FLG QVD   A+ I++QLLFLDAEDP KDI L INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 157 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 216
           D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ R+MIHQPLG A G+ATD+ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 217 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID 270
           + RE+ YHK +LN  L+  TG+P+E+I  DT+RD FM+P EAK+YGLID+VID
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVID 190

[Close]

BLAST of CmoCh01G003620 vs. ExPASy Swiss-Prot
Match: O34125 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-57
Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 97  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 156
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 157 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 216
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A D+ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 217 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI 269
           + RE+ YHK  LN +L++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

[Close]

BLAST of CmoCh01G003620 vs. ExPASy Swiss-Prot
Match: Q5N1P6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-57
Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 97  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 156
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 157 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 216
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A D+ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 217 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI 269
           + RE+ YHK  LN +L++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

[Close]

BLAST of CmoCh01G003620 vs. ExPASy TrEMBL
Match: A0A6J1G9P1 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111452225 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 3.7e-188
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 337
           KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

[Close]

BLAST of CmoCh01G003620 vs. ExPASy TrEMBL
Match: A0A6J1KEX5 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111492640 PE=3 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 4.5e-186
Identity = 332/336 (98.81%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           MELSFTYA SPSLHSRLMC+NHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MELSFTYAASPSLHSRLMCYNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSSPLRRTLSSNWDVLGNYSAAS PALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRRTLSSNWDVLGNYSAASTPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLA+GSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 337
           KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

[Close]

BLAST of CmoCh01G003620 vs. ExPASy TrEMBL
Match: A0A6J1CQN6 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111013299 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.2e-156
Identity = 290/338 (85.80%), Postives = 305/338 (90.24%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           ME+SFTY PSPS   RLM F+HGVL+S FP+ TP KHSHG NSS N  R  KS P+  VK
Sbjct: 1   MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VK 60

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSS +RRTLSSNWDVL N+SA SAP+L RFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAED TKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAF
Sbjct: 121 FIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAF 180

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 240

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWK+EGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR 300

Query: 301 KAKKNLPSETKILQNGY---QGSDEERSPQPETEEPSP 336
           KAKKNLPSE KILQNGY   QG+DEER  Q ETEEPSP
Sbjct: 301 KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP 335

[Close]

BLAST of CmoCh01G003620 vs. ExPASy TrEMBL
Match: A0A1S3C615 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103496858 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.6e-154
Identity = 289/340 (85.00%), Postives = 308/340 (90.59%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGV-LASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAA 60
           MELSFT+APSPS +  L  F+HG+  +S  P+STP  HSHG N +SN FRIR  SVPV  
Sbjct: 1   MELSFTHAPSPSPYG-LKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLN 60

Query: 61  VKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMT 120
              SLSSS LRRTLSSNWDVL NYSA+SAP+LPRFEELDTTNMLLRQRIIFLGSQVDD+T
Sbjct: 61  -HPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVT 120

Query: 121 ADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMG 180
           ADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVST+C+GLAASMG
Sbjct: 121 ADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMG 180

Query: 181 AFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGK 240
           AFLLA+GSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGK
Sbjct: 181 AFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGK 240

Query: 241 PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEG 300
           PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTRVWDLWK+EG
Sbjct: 241 PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEG 300

Query: 301 SRKAKKNLPSETKILQNGYQ---GSDEERSPQPETEEPSP 336
           SRKAKKNLPSE+KIL+NGYQ   GSDEER  Q ETEEPSP
Sbjct: 301 SRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSP 338

[Close]

BLAST of CmoCh01G003620 vs. ExPASy TrEMBL
Match: A0A0A0LA84 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G363170 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 5.1e-153
Identity = 285/340 (83.82%), Postives = 305/340 (89.71%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAAV 60
           MELSFT+APSPS +  L   +HG  +S FP+STP KHSHG N +SNAFRIR  SVPV   
Sbjct: 1   MELSFTHAPSPSPYG-LKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVN- 60

Query: 61  KASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTA 120
             S SSS LRRTLSSNWDV  NYS +SA +LPRFEELDTTNMLLRQRIIFLGSQVDDMTA
Sbjct: 61  HPSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTA 120

Query: 121 DFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGA 180
           DFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGA
Sbjct: 121 DFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGA 180

Query: 181 FLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKP 240
           FLLA+GSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKP
Sbjct: 181 FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP 240

Query: 241 LEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGS 300
           +EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTR+WDLWK+EGS
Sbjct: 241 IEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGS 300

Query: 301 RKAKKNLPSETKILQNGY----QGSDEERSPQPETEEPSP 336
           RKAKKNLPSE+KIL+NGY    QGSD+ER  Q ETEEPSP
Sbjct: 301 RKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSP 338

[Close]

BLAST of CmoCh01G003620 vs. NCBI nr
Match: XP_022948597.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 667.2 bits (1720), Expect = 7.7e-188
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 337
           KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

[Close]

BLAST of CmoCh01G003620 vs. NCBI nr
Match: KAG6606994.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 664.5 bits (1713), Expect = 5.0e-187
Identity = 334/336 (99.40%), Postives = 335/336 (99.70%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 337
           KAKKNLPSETKILQNGYQGSDEE SPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEESSPQPETEEPSPK 336

[Close]

BLAST of CmoCh01G003620 vs. NCBI nr
Match: KAG7036696.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 664.5 bits (1713), Expect = 5.0e-187
Identity = 334/336 (99.40%), Postives = 335/336 (99.70%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 94

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 95  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 154

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 155 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 214

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 215 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 274

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Sbjct: 275 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 334

Query: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 337
           KAKKNLPSETKILQNGYQGSDEE SPQPETEEPSPK
Sbjct: 335 KAKKNLPSETKILQNGYQGSDEESSPQPETEEPSPK 370

[Close]

BLAST of CmoCh01G003620 vs. NCBI nr
Match: XP_022997788.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 660.2 bits (1702), Expect = 9.4e-186
Identity = 332/336 (98.81%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           MELSFTYA SPSLHSRLMC+NHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MELSFTYAASPSLHSRLMCYNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSSPLRRTLSSNWDVLGNYSAAS PALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRRTLSSNWDVLGNYSAASTPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLA+GSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 337
           KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

[Close]

BLAST of CmoCh01G003620 vs. NCBI nr
Match: XP_023522581.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.1 bits (1699), Expect = 2.1e-185
Identity = 331/336 (98.51%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60
           M+LSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MDLSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           ASLSSSPLR TLSSNWDVLGNYSAASAP+LPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRPTLSSNWDVLGNYSAASAPSLPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300
           EQIELDTDRDNFMNPWEAK YGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKVYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 337
           KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

[Close]

BLAST of CmoCh01G003620 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 409.5 bits (1051), Expect = 2.7e-114
Identity = 205/273 (75.09%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 49  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLR 108
           RI K+     V++S+S S P R+TLSSNWDV      S A +P+ LP FEELDTTNMLLR
Sbjct: 33  RIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLR 92

Query: 109 QRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKA 168
           QRI+FLGSQVDDMTAD +ISQLL LDAED  +DI L INSPGGS+TAGMGIYDAMK CKA
Sbjct: 93  QRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKA 152

Query: 169 DVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYH 228
           DVSTVC+GLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGG+AT+MSIR+REM YH
Sbjct: 153 DVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYH 212

Query: 229 KIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANP 288
           KIKLNKI SRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI +  P
Sbjct: 213 KIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTP 272

Query: 289 PPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY 318
           PPKT+VWDLWK+EG++K   NLPSE  + QNGY
Sbjct: 273 PPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of CmoCh01G003620 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-53
Identity = 119/262 (45.42%), Postives = 166/262 (63.36%), Query Frame = 0


Query: 28  PFPVSTPFKHSHGANSSS----NAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYS 87
           P  VS+    S  A+SSS    N   ++ +  ++    + S SPLR    +N  +  + +
Sbjct: 12  PSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLR---FANASIEMSQT 71

Query: 88  AASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLIN 147
             SA    R  E D   +LLR+RI+FLGS +DD  AD I+SQLL LDA+DP KDIKL IN
Sbjct: 72  QESA---IRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFIN 131

Query: 148 SPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP 207
           SPGGS++A M IYD ++L +ADVST+ +G+AAS  + +L AG+KGKRF MPN R+MIHQP
Sbjct: 132 SPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQP 191

Query: 208 LGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGL 267
           LG A G+A D+ I+ +E+ ++K  +  I++  T +  EQ+  D DRD +M+P EA EYGL
Sbjct: 192 LGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGL 251

Query: 268 IDEVIDDGKPGLIAPIAEANPP 286
           ID VID      + P+ +   P
Sbjct: 252 IDGVIDGDSIIPLEPVPDRVKP 267

[Close]

BLAST of CmoCh01G003620 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 205.7 bits (522), Expect = 5.9e-53
Identity = 108/205 (52.68%), Postives = 137/205 (66.83%), Query Frame = 0


Query: 76  WDVLGNYSAASAPALPRFEE------------LDTTNMLLRQRIIFLGSQVDDMTADFII 135
           W +  +    S+P  P + +                + L + RII  G  VDD  A+ I+
Sbjct: 81  WSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIV 140

Query: 136 SQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLA 195
           +QLL+LDA DPTKDI + +NSPGGSVTAGM I+D M+  + DVSTVC+GLAASMGAFLL+
Sbjct: 141 AQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS 200

Query: 196 AGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQI 255
           AG+KGKR+ +PN R+MIHQPLG A G  TD+ I+  EM +HK  LN  L+  TG+ LE+I
Sbjct: 201 AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKI 260

Query: 256 ELDTDRDNFMNPWEAKEYGLIDEVI 269
             DTDRD FM+  EAKEYGLID VI
Sbjct: 261 NQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of CmoCh01G003620 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 168.7 bits (426), Expect = 8.0e-42
Identity = 80/174 (45.98%), Postives = 125/174 (71.84%), Query Frame = 0


Query: 97  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 156
           D  + LL++RII +   ++D T+  +++QLL+L++E+P+K I + +NSPGG VTAG+ IY
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107

Query: 157 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 216
           D M+  ++ +ST+C+G AASM + LLAAG+KG+R  +PN  VMIHQP G   G+A D++I
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167

Query: 217 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD 271
             +++      LN++  + TG+PL+ +  + DRD+FM P EAK +G+IDEVID+
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

[Close]

BLAST of CmoCh01G003620 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-35
Identity = 75/174 (43.10%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 96  LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGI 155
           LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI + +N PGGS  + + I
Sbjct: 95  LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAI 154

Query: 156 YDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMS 215
           YD M   K  V TV  G+AAS GA LLA G KG R+ MPN RVMIHQP    GG   D+ 
Sbjct: 155 YDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVR 214

Query: 216 IRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID 270
            ++ E    + K++++ +  TG+PLE+++  T+RD F++  EA E+GLID +++
Sbjct: 215 RQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 268

The following BLAST results are available for this feature:

BLAST of CmoCh01G003620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXJ6	3.8e-113	75.09	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis t...	[more]
Q3MFR5	3.5e-58	62.03	ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strai...	[more]
Q8YXH5	5.9e-58	64.74	ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
O34125	1.7e-57	63.37	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]
Q5N1P6	1.7e-57	63.37	ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain AT...	[more]

BLAST of CmoCh01G003620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9P1	3.7e-188	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KEX5	4.5e-186	98.81	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1CQN6	2.2e-156	85.80	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3C615	4.6e-154	85.00	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LA84	5.1e-153	83.82	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of CmoCh01G003620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948597.1	7.7e-188	100.00	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita mosch...	[more]
KAG6606994.1	5.0e-187	99.40	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, partial [Cucurb...	[more]
KAG7036696.1	5.0e-187	99.40	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, partial [Cucurb...	[more]
XP_022997788.1	9.4e-186	98.81	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita maxim...	[more]
XP_023522581.1	2.1e-185	98.51	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita pepo ...	[more]

BLAST of CmoCh01G003620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66670.1	2.7e-114	75.09	CLP protease proteolytic subunit 3	[more]
AT5G45390.1	3.5e-53	45.42	CLP protease P4	[more]
AT1G02560.1	5.9e-53	52.68	nuclear encoded CLP protease 5	[more]
AT5G23140.1	8.0e-42	45.98	nuclear-encoded CLP protease P7	[more]
AT1G11750.1	2.5e-35	43.10	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 97..112 score: 46.25 coord: 137..157 score: 63.57 coord: 168..185 score: 69.03 coord: 189..208 score: 52.0 coord: 246..265 score: 58.0
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 53..271 score: 37.187035
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 97..267 e-value: 2.1464E-103 score: 298.972
None	No IPR available	GENE3D	3.90.226.10		coord: 89..272 e-value: 5.9E-72 score: 243.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..323
None	No IPR available	PANTHER	PTHR10381:SF50	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 3, CHLOROPLASTIC	coord: 69..315
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 96..269 e-value: 3.8E-74 score: 248.5
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 69..315
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 168..179
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 190..203
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 95..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G003620.1	CmoCh01G003620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity