CmoCh01G003320 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G003320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Alkylated DNA repair protein alkB-like protein 8
Location	Cmo_Chr01: 1579832 .. 1582063 (+)
RNA-Seq Expression	CmoCh01G003320
Synteny	CmoCh01G003320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTGGATGAAAGGTTGCGACGACTGGAGGGAAATGGGGGAAGAGCTGGATGATGAGCGGGAAATCCTGAAGCAAGTTTTTGGCGATTCTTCTGAAGATGAAGACTGTGAAGATCAAACTGTAATAGGAGATTCAGCATATGAAGGTGGCCACATTCGTAGATGGGAGCAAGCCAAGGAAATCAAAGGTTTATGGCTGTGCAGAAGCTTCCTCTCTCCCCAACAAGAATCATCGCTACTCTCTGCAATCCGAAACGGTTCGTTGTATCGAATCTATCTGTTACTTTCCTGCAATTTCTTATCTCAAGTTGCTTTGAAAGAGAATATCGAAGAAAATTGAATTTCTCTATGTTTTGATCATTCTTCTTCGTATATTGTTTCAAGAGGTTCTGTTTTCGAATTTGATCCCTGAACTTAAGATTCAACTGAAGGAACAATAGGATGGAGTTTTTTTTTTGTTTGTTTAATTTATAAATCTTTGAGAAGAGTTTTTTTTACCCTTCTTTTTGAGATTGTAGATATTTGAACAAGTTTGTGAATGTTTAAGAAACTATTTCTGTGGTAATCTCACATGATTAGAGACTATTTCTGTATTGTTGTTCTTTCAGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGTAACTACAGTTTTAATCTTGATAATTTTATTGGTGATCTATTATATTGATTTTATTTCTAGAAATGAACTCTTCTTGGAGAACTTAATAATGCTGCGCTGTTGCTGGATTTTGTTCTTGAAATGTAGATTTAATAATATCCTTATCTACTGTTACATTATCTGTTCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGCTGAACTTTCAGATTCCATTCATGAGGCAGTGCTTTCAAGTAACCACATGACAGATCCTTTGATTGTAGACCGCCATAATGGAGTTAAGATTGATTGTCCTCTTCCTTCAGATATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAACATGTATCAACCAGGTGAGGTGCGAAGATGCCCATTTCCATTCTATTGATTAGACATTTATTAACCACGATTGGTTGGCTTAGCAGTTCATAAGAGCCATGTTATAAAGAGTTCAGAAGGAATGAGTTCAAGCTAATGTAGTTATTGATTTAGGTTTTAATATTTTCCTGACAACCAAATGTAGTCAGGTGGTTGTTTCATGAAAATAGTCGAGGTACGTGCAAGCTGACTCAAATACTCACAAGTATCATAAAAGGAGAGAGAAAAGAAGATTAGACATCTGTTTGAAGTGAACCTGTAGGCCCATAGCTTTAAGGGCTTCAAGAGGCTGTTTGGATACCTTTTTTTTATGTAGAACCATATAACTTATTTGGTAGGATAATTTTTAAAACACCCCTTGTTTTAGTAGAATGCAATTTTTAGAGTCAGTTTGCAAAACAGTTTCTGCAAACAGAATTTAGAGAACAACGTTTTAGCCGCCTAGATTGTGATGTTCGGTCTGTCAAGATGACGGGTGTATTCTTAACAACTGAAAGAAACAGTTACTCGTATTAGTAATAGCGAGAGGAGAAGAGGAGAGGGAGAGGTCACCTTTTTTTTTTTTTTAATAGCAGTATTATGCCAAAAGTGTAGTATCTTGATTAAGTTATTTCATATCTCTTTTATGAATTCTGTTTTTACTAGTTCACTTATATGATTTGTCCAAATTCTGCACACTTCAACCTCTTTCATGATAGAGTAGATTTCCAAATGTTTTGTTAATCTGATGAAAATGGTTTGTGAATGGCATGGTTAAAACATCTTAGGGTATGATATTCAAGAAAAGTTATATCTGACATTGCTATCTTCATTCACTGTATTTATTTCATTCACTGACATTGTTACAACTTCATTCTAATATTTTTCATAAAGGGGATCTGTGCACATGTTGACCTCATGCGCTTTGAAGATGGAATTGCCATTGTCTCACTCGAGTCACCATGTGTGATGCATTTTACTCGAGTTGATGAAACTTCCCGTAATCCTACTAGCAAGGGAGAAGTCGATGTATCGATGTCAAAAGTGCCCATATACCTAAACCCAGGATCGGTTGTTTTATTGTGGGGTGAAGCTCGGTACCTCTGGAAGCATGAGATAAATCGTAAGCCAGGGTTTCAAATGTGGGAAGGCCAGGAACTCACTCAGGGGAGGCGAACTTCCATCACACTGAGAAAGCTCTGTCAAGTTGATTAA

mRNA sequence

ATGTGCTGGATGAAAGGTTGCGACGACTGGAGGGAAATGGGGGAAGAGCTGGATGATGAGCGGGAAATCCTGAAGCAAGTTTTTGGCGATTCTTCTGAAGATGAAGACTGTGAAGATCAAACTGTAATAGGAGATTCAGCATATGAAGGTGGCCACATTCGTAGATGGGAGCAAGCCAAGGAAATCAAAGGTTTATGGCTGTGCAGAAGCTTCCTCTCTCCCCAACAAGAATCATCGCTACTCTCTGCAATCCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGCTGAACTTTCAGATTCCATTCATGAGGCAGTGCTTTCAAGTAACCACATGACAGATCCTTTGATTGTAGACCGCCATAATGGAGTTAAGATTGATTGTCCTCTTCCTTCAGATATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAACATGTATCAACCAGGTGAGAGTCAGTTTGCAAAACAGTTTCTGCAAACAGAATTTAGAGAACAACGTTTTAGCCGCCTAGATTGTGATGTTCGGTCTGTCAAGATGACGGGTTATTATGCCAAAAGTGTAGGGATCTGTGCACATGTTGACCTCATGCGCTTTGAAGATGGAATTGCCATTGTCTCACTCGAGTCACCATGTGTGATGCATTTTACTCGAGTTGATGAAACTTCCCGTAATCCTACTAGCAAGGGAGAAGTCGATGTATCGATGTCAAAAGTGCCCATATACCTAAACCCAGGATCGGTTGTTTTATTGTGGGGTGAAGCTCGGTACCTCTGGAAGCATGAGATAAATCGTAAGCCAGGGTTTCAAATGTGGGAAGGCCAGGAACTCACTCAGGGGAGGCGAACTTCCATCACACTGAGAAAGCTCTGTCAAGTTGATTAA

Coding sequence (CDS)

ATGTGCTGGATGAAAGGTTGCGACGACTGGAGGGAAATGGGGGAAGAGCTGGATGATGAGCGGGAAATCCTGAAGCAAGTTTTTGGCGATTCTTCTGAAGATGAAGACTGTGAAGATCAAACTGTAATAGGAGATTCAGCATATGAAGGTGGCCACATTCGTAGATGGGAGCAAGCCAAGGAAATCAAAGGTTTATGGCTGTGCAGAAGCTTCCTCTCTCCCCAACAAGAATCATCGCTACTCTCTGCAATCCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGCTGAACTTTCAGATTCCATTCATGAGGCAGTGCTTTCAAGTAACCACATGACAGATCCTTTGATTGTAGACCGCCATAATGGAGTTAAGATTGATTGTCCTCTTCCTTCAGATATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAACATGTATCAACCAGGTGAGAGTCAGTTTGCAAAACAGTTTCTGCAAACAGAATTTAGAGAACAACGTTTTAGCCGCCTAGATTGTGATGTTCGGTCTGTCAAGATGACGGGTTATTATGCCAAAAGTGTAGGGATCTGTGCACATGTTGACCTCATGCGCTTTGAAGATGGAATTGCCATTGTCTCACTCGAGTCACCATGTGTGATGCATTTTACTCGAGTTGATGAAACTTCCCGTAATCCTACTAGCAAGGGAGAAGTCGATGTATCGATGTCAAAAGTGCCCATATACCTAAACCCAGGATCGGTTGTTTTATTGTGGGGTGAAGCTCGGTACCTCTGGAAGCATGAGATAAATCGTAAGCCAGGGTTTCAAATGTGGGAAGGCCAGGAACTCACTCAGGGGAGGCGAACTTCCATCACACTGAGAAAGCTCTGTCAAGTTGATTAA

Protein sequence

MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDVRSVKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD

Homology

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BLAST of CmoCh01G003320 vs. ExPASy Swiss-Prot
Match: Q8RWY1 (Alkylated DNA repair protein ALKBH8 homolog OS=Arabidopsis thaliana OX=3702 GN=ALKBH8 PE=2 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 199 YAKSVGICAHVDL-MRFEDGIAIVSLESPCVMHFTRVD-ETSRNPTSKGEV--DVSMSKV 258
           Y   VG+  H+D    FED I  +SL  PC+M F R    T +  T+  E   D S  K 
Sbjct: 217 YPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTWKASTTDAEKSGDSSCIKK 276

Query: 259 PIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKL 306
            +YL P S++LL GEARY W H I      ++ +       RR S TLRK+
Sbjct: 277 ALYLPPRSMLLLSGEARYAWNHYIPHHKIDKVKDKVIRRSSRRVSFTLRKV 327

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BLAST of CmoCh01G003320 vs. ExPASy Swiss-Prot
Match: Q9UT12 (Uncharacterized protein P8A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP8A3.02c PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.5e-07
Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 164 PGESQFAKQFLQTEFREQRFSRLDCDVRSVKMTGYYAKSVGICAHVDLMRFEDGIAIVSL 223
           P        ++ ++F+++ +   D +   +++   Y    GI  H DL  F DG+AI S 
Sbjct: 91  PAHINCLNDYIPSDFKQRLWKGQDAEAIIMQV---YNPGDGIIPHKDLEMFGDGVAIFSF 150

Query: 224 ESPCVMHFTRVDETSRNPTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPG 283
            S   M FT       +P  K        K  I L  GS++L+ G ARY W HEI  + G
Sbjct: 151 LSNTTMIFT-------HPELK-------LKSKIRLEKGSLLLMSGTARYDWFHEIPFRAG 210

Query: 284 -FQMWEGQE--LTQGRRTSITLRKLCQ 308
            + M +G+E  +++ +R S+T+R++ +
Sbjct: 211 DWVMNDGEEKWVSRSQRLSVTMRRIIE 220

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BLAST of CmoCh01G003320 vs. ExPASy TrEMBL
Match: A0A6J1GAA7 (uncharacterized protein LOC111452220 OS=Cucurbita moschata OX=3662 GN=LOC111452220 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.2e-154
Identity = 272/309 (88.03%), Postives = 272/309 (88.03%), Query Frame = 0


Query: 1   MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK 60
           MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK
Sbjct: 1   MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK 60

Query: 61  EIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL 120
           EIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL
Sbjct: 61  EIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL 120

Query: 121 SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFRE 180
           SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE              
Sbjct: 121 SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE-------------- 180

Query: 181 QRFSRLDCDVRSVKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRN 240
                                  GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRN
Sbjct: 181 -----------------------GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRN 240

Query: 241 PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI 300
           PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI
Sbjct: 241 PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI 272

Query: 301 TLRKLCQVD 310
           TLRKLCQVD
Sbjct: 301 TLRKLCQVD 272

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BLAST of CmoCh01G003320 vs. ExPASy TrEMBL
Match: A0A6J1KDK2 (uncharacterized protein LOC111492881 OS=Cucurbita maxima OX=3661 GN=LOC111492881 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.5e-143
Identity = 258/297 (86.87%), Postives = 259/297 (87.21%), Query Frame = 0


Query: 13  MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 72
           MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL
Sbjct: 1   MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 60

Query: 73  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 132
           SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD
Sbjct: 61  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 120

Query: 133 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDVRS 192
           RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE                          
Sbjct: 121 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE-------------------------- 180

Query: 193 VKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVSMS 252
                      GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETS +PTSKGEVDVSMS
Sbjct: 181 -----------GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSCDPTSKGEVDVSMS 240

Query: 253 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 310
           KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD
Sbjct: 241 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 260

[Close]

BLAST of CmoCh01G003320 vs. ExPASy TrEMBL
Match: A0A0A0KV56 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001660 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 7.3e-122
Identity = 220/297 (74.07%), Postives = 242/297 (81.48%), Query Frame = 0


Query: 13  MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 72
           MGE+LDDE EILKQVFGDSSEDED  D+TV  DS+YE GHI +WEQ K+IKGLWLCR FL
Sbjct: 1   MGEKLDDEVEILKQVFGDSSEDEDFVDETVTNDSSYELGHIHKWEQVKQIKGLWLCRFFL 60

Query: 73  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 132
           SPQQ+SSLLSAIRNEGWFMEASQNQAMRFGNLPTWA ELSDS++EAVLSSNHMTD LIVD
Sbjct: 61  SPQQQSSLLSAIRNEGWFMEASQNQAMRFGNLPTWAVELSDSVYEAVLSSNHMTDTLIVD 120

Query: 133 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDVRS 192
           R+NG KIDCPLPSDILWREPLFDQMIAN+YQPGE                          
Sbjct: 121 RYNGDKIDCPLPSDILWREPLFDQMIANVYQPGE-------------------------- 180

Query: 193 VKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVSMS 252
                      GICAHVDLMRFEDGIAIVSLESPC+MHFT+VD+TS +P+ KGEV++S S
Sbjct: 181 -----------GICAHVDLMRFEDGIAIVSLESPCIMHFTQVDKTSCDPSIKGEVNLSTS 240

Query: 253 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 310
           KVP+YLNPGS+V+LWGEARY WKHEINRKPGFQ+WEGQEL QGRRTSITLRKLC V+
Sbjct: 241 KVPVYLNPGSLVILWGEARYHWKHEINRKPGFQIWEGQELAQGRRTSITLRKLCHVE 260

[Close]

BLAST of CmoCh01G003320 vs. ExPASy TrEMBL
Match: A0A5A7TNC5 (Alkylated DNA repair protein alkB-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00950 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.0e-117
Identity = 214/297 (72.05%), Postives = 236/297 (79.46%), Query Frame = 0


Query: 13  MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 72
           MGE+LDDE EILKQVFGDSSEDED  D+TV  DS++E GHI +WEQ K+IKGLWLCR FL
Sbjct: 1   MGEKLDDEVEILKQVFGDSSEDEDFIDETVTTDSSFELGHIHKWEQVKQIKGLWLCRFFL 60

Query: 73  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 132
           SPQQ+SSLLSAIRNEGWFMEAS+NQAMRFGNLPTWA ELSDS++EAVLSSNH TD  I D
Sbjct: 61  SPQQQSSLLSAIRNEGWFMEASENQAMRFGNLPTWAVELSDSVYEAVLSSNHKTDTSIAD 120

Query: 133 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDVRS 192
            +NG KIDCPLPSDILWREPLFDQMIAN+YQPGE                          
Sbjct: 121 CYNGDKIDCPLPSDILWREPLFDQMIANVYQPGE-------------------------- 180

Query: 193 VKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVSMS 252
                      GICAHVDLMRFEDGIAIVSLESPCVMHFT VDE+S +P+ KGE  +S  
Sbjct: 181 -----------GICAHVDLMRFEDGIAIVSLESPCVMHFTHVDESSCDPSIKGEGILSAL 240

Query: 253 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 310
           KVP+YLNPGS+V+LWGEARYLWKHEINRKPGFQ+WEGQEL+QGRRTSITLRKLC V+
Sbjct: 241 KVPVYLNPGSLVILWGEARYLWKHEINRKPGFQIWEGQELSQGRRTSITLRKLCHVE 260

[Close]

BLAST of CmoCh01G003320 vs. ExPASy TrEMBL
Match: A0A1S3BYI6 (uncharacterized protein LOC103494783 OS=Cucumis melo OX=3656 GN=LOC103494783 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.0e-117
Identity = 214/297 (72.05%), Postives = 236/297 (79.46%), Query Frame = 0


Query: 13  MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 72
           MGE+LDDE EILKQVFGDSSEDED  D+TV  DS++E GHI +WEQ K+IKGLWLCR FL
Sbjct: 1   MGEKLDDEVEILKQVFGDSSEDEDFIDETVTTDSSFELGHIHKWEQVKQIKGLWLCRFFL 60

Query: 73  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 132
           SPQQ+SSLLSAIRNEGWFMEAS+NQAMRFGNLPTWA ELSDS++EAVLSSNH TD  I D
Sbjct: 61  SPQQQSSLLSAIRNEGWFMEASENQAMRFGNLPTWAVELSDSVYEAVLSSNHKTDTSIAD 120

Query: 133 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDVRS 192
            +NG KIDCPLPSDILWREPLFDQMIAN+YQPGE                          
Sbjct: 121 CYNGDKIDCPLPSDILWREPLFDQMIANVYQPGE-------------------------- 180

Query: 193 VKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVSMS 252
                      GICAHVDLMRFEDGIAIVSLESPCVMHFT VDE+S +P+ KGE  +S  
Sbjct: 181 -----------GICAHVDLMRFEDGIAIVSLESPCVMHFTHVDESSCDPSIKGEGILSAL 240

Query: 253 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 310
           KVP+YLNPGS+V+LWGEARYLWKHEINRKPGFQ+WEGQEL+QGRRTSITLRKLC V+
Sbjct: 241 KVPVYLNPGSLVILWGEARYLWKHEINRKPGFQIWEGQELSQGRRTSITLRKLCHVE 260

[Close]

BLAST of CmoCh01G003320 vs. NCBI nr
Match: XP_022948590.1 (uncharacterized protein LOC111452220 [Cucurbita moschata])

HSP 1 Score: 553.9 bits (1426), Expect = 8.7e-154
Identity = 272/309 (88.03%), Postives = 272/309 (88.03%), Query Frame = 0


Query: 1   MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK 60
           MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK
Sbjct: 1   MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK 60

Query: 61  EIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL 120
           EIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL
Sbjct: 61  EIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL 120

Query: 121 SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFRE 180
           SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE              
Sbjct: 121 SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE-------------- 180

Query: 181 QRFSRLDCDVRSVKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRN 240
                                  GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRN
Sbjct: 181 -----------------------GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRN 240

Query: 241 PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI 300
           PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI
Sbjct: 241 PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI 272

Query: 301 TLRKLCQVD 310
           TLRKLCQVD
Sbjct: 301 TLRKLCQVD 272

[Close]

BLAST of CmoCh01G003320 vs. NCBI nr
Match: XP_023524850.1 (uncharacterized protein LOC111788655 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 541.2 bits (1393), Expect = 5.8e-150
Identity = 267/309 (86.41%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 1   MCWMKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK 60
           MCWMKGCDD REMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK
Sbjct: 1   MCWMKGCDDRREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAK 60

Query: 61  EIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL 120
           EI+GLWLCRSFLSPQQESSLL+AIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL
Sbjct: 61  EIRGLWLCRSFLSPQQESSLLAAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVL 120

Query: 121 SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFRE 180
           SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE              
Sbjct: 121 SSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE-------------- 180

Query: 181 QRFSRLDCDVRSVKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRN 240
                                  GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETS +
Sbjct: 181 -----------------------GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSCD 240

Query: 241 PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI 300
           PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI
Sbjct: 241 PTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSI 272

Query: 301 TLRKLCQVD 310
           TLRKLCQVD
Sbjct: 301 TLRKLCQVD 272

[Close]

BLAST of CmoCh01G003320 vs. NCBI nr
Match: KAG6606968.1 (Alkylated DNA repair protein ALKBH8-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.9 bits (1361), Expect = 3.0e-146
Identity = 264/306 (86.27%), Postives = 266/306 (86.93%), Query Frame = 0


Query: 4   MKGCDDWREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIK 63
           MKGCDD REMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIK
Sbjct: 1   MKGCDDRREMGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIK 60

Query: 64  GLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSN 123
           GLWLCRSFLSPQQESSLL+AIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSN
Sbjct: 61  GLWLCRSFLSPQQESSLLAAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSN 120

Query: 124 HMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRF 183
           HMTDPLIVDRH GVKIDCPLPSDILWREPLFDQMIANMYQPGE                 
Sbjct: 121 HMTDPLIVDRHIGVKIDCPLPSDILWREPLFDQMIANMYQPGE----------------- 180

Query: 184 SRLDCDVRSVKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTS 243
                               GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETS +PTS
Sbjct: 181 --------------------GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSCDPTS 240

Query: 244 KGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLR 303
           KGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLR
Sbjct: 241 KGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLR 269

Query: 304 KLCQVD 310
           KLCQVD
Sbjct: 301 KLCQVD 269

[Close]

BLAST of CmoCh01G003320 vs. NCBI nr
Match: XP_022998149.1 (uncharacterized protein LOC111492881 [Cucurbita maxima])

HSP 1 Score: 516.5 bits (1329), Expect = 1.5e-142
Identity = 258/297 (86.87%), Postives = 259/297 (87.21%), Query Frame = 0


Query: 13  MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 72
           MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL
Sbjct: 1   MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 60

Query: 73  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 132
           SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD
Sbjct: 61  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 120

Query: 133 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDVRS 192
           RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE                          
Sbjct: 121 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE-------------------------- 180

Query: 193 VKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVSMS 252
                      GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETS +PTSKGEVDVSMS
Sbjct: 181 -----------GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSCDPTSKGEVDVSMS 240

Query: 253 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 310
           KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD
Sbjct: 241 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 260

[Close]

BLAST of CmoCh01G003320 vs. NCBI nr
Match: XP_023524598.1 (uncharacterized protein LOC111788493 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483.8 bits (1244), Expect = 1.1e-132
Identity = 246/297 (82.83%), Postives = 249/297 (83.84%), Query Frame = 0


Query: 13  MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFL 72
           MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEI+GLWLCRSFL
Sbjct: 1   MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIRGLWLCRSFL 60

Query: 73  SPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 132
           SPQQESSLL+AIRN       S   AMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD
Sbjct: 61  SPQQESSLLAAIRNGSLSRNLS---AMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVD 120

Query: 133 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDVRS 192
           RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE                          
Sbjct: 121 RHNGVKIDCPLPSDILWREPLFDQMIANMYQPGE-------------------------- 180

Query: 193 VKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVSMS 252
                      GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETS +PTSKGEVDVSMS
Sbjct: 181 -----------GICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSCDPTSKGEVDVSMS 240

Query: 253 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 310
           KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD
Sbjct: 241 KVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD 257

[Close]

BLAST of CmoCh01G003320 vs. TAIR 10
Match: AT4G02485.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 2.3e-67
Identity = 150/298 (50.34%), Postives = 179/298 (60.07%), Query Frame = 0


Query: 17  LDDEREILKQVFGDSSEDEDCED----QTV-IGDSAYEGGHIRRWEQAKEIKGLWLCRSF 76
           +D+E E L+  FGDSS+DED  D    +T+ IGDSA        WE+ +EI GLWL R+F
Sbjct: 1   MDEEAENLRAAFGDSSDDEDIADRPGKETIGIGDSAV-------WERVEEINGLWLYRNF 60

Query: 77  LSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIV 136
           LS   +S LLSAI NEGWF+E S NQAMRFG+LP+WA ELSD I E + S          
Sbjct: 61  LSIAHQSHLLSAILNEGWFVEESINQAMRFGDLPSWATELSDLIRETLES---------- 120

Query: 137 DRHNGVKIDCP-LPSDILWREPLFDQMIANMYQPGESQFAKQFLQTEFREQRFSRLDCDV 196
                  +D P L +D+LWREPLFDQ+I N+YQPGE                        
Sbjct: 121 -------VDLPVLSADLLWREPLFDQLIVNLYQPGE------------------------ 180

Query: 197 RSVKMTGYYAKSVGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSRNPTSKGEVDVS 256
                        GICAHVDL+RFEDGIAIVSLESPCVM F        +P  K E +  
Sbjct: 181 -------------GICAHVDLLRFEDGIAIVSLESPCVMRF--------SPAEKNEYEA- 225

Query: 257 MSKVPIYLNPGSVVLLWGEARYLWKHEINRKP-GFQMWEGQELTQGRRTSITLRKLCQ 308
              V + LNPGS++L+ GEARY WKHEINRK  GFQ+WEG+E+ Q RR SITLRKLCQ
Sbjct: 241 ---VDVLLNPGSLILMSGEARYRWKHEINRKQNGFQLWEGEEIDQKRRISITLRKLCQ 225

[Close]

BLAST of CmoCh01G003320 vs. TAIR 10
Match: AT1G31600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 65.5 bits (158), Expect = 8.8e-11
Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 199 YAKSVGICAHVDL-MRFEDGIAIVSLESPCVMHFTRVD-ETSRNPTSKGEV--DVSMSKV 258
           Y   VG+  H+D    FED I  +SL  PC+M F R    T +  T+  E   D S  K 
Sbjct: 302 YPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTWKASTTDAEKSGDSSCIKK 361

Query: 259 PIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKL 306
            +YL P S++LL GEARY W H I      ++ +       RR S TLRK+
Sbjct: 362 ALYLPPRSMLLLSGEARYAWNHYIPHHKIDKVKDKVIRRSSRRVSFTLRKV 412

[Close]

BLAST of CmoCh01G003320 vs. TAIR 10
Match: AT1G31600.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 65.5 bits (158), Expect = 8.8e-11
Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 199 YAKSVGICAHVDL-MRFEDGIAIVSLESPCVMHFTRVD-ETSRNPTSKGEV--DVSMSKV 258
           Y   VG+  H+D    FED I  +SL  PC+M F R    T +  T+  E   D S  K 
Sbjct: 215 YPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTWKASTTDAEKSGDSSCIKK 274

Query: 259 PIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKL 306
            +YL P S++LL GEARY W H I      ++ +       RR S TLRK+
Sbjct: 275 ALYLPPRSMLLLSGEARYAWNHYIPHHKIDKVKDKVIRRSSRRVSFTLRKV 325

[Close]

BLAST of CmoCh01G003320 vs. TAIR 10
Match: AT1G31600.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 65.5 bits (158), Expect = 8.8e-11
Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 199 YAKSVGICAHVDL-MRFEDGIAIVSLESPCVMHFTRVD-ETSRNPTSKGEV--DVSMSKV 258
           Y   VG+  H+D    FED I  +SL  PC+M F R    T +  T+  E   D S  K 
Sbjct: 302 YPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTWKASTTDAEKSGDSSCIKK 361

Query: 259 PIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKL 306
            +YL P S++LL GEARY W H I      ++ +       RR S TLRK+
Sbjct: 362 ALYLPPRSMLLLSGEARYAWNHYIPHHKIDKVKDKVIRRSSRRVSFTLRKV 412

The following BLAST results are available for this feature:

BLAST of CmoCh01G003320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWY1	1.2e-09	38.74	Alkylated DNA repair protein ALKBH8 homolog OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9UT12	7.5e-07	29.25	Uncharacterized protein P8A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]

BLAST of CmoCh01G003320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAA7	4.2e-154	88.03	uncharacterized protein LOC111452220 OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]
A0A6J1KDK2	7.5e-143	86.87	uncharacterized protein LOC111492881 OS=Cucurbita maxima OX=3661 GN=LOC111492881...	[more]
A0A0A0KV56	7.3e-122	74.07	Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A5A7TNC5	7.0e-117	72.05	Alkylated DNA repair protein alkB-like protein 8 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BYI6	7.0e-117	72.05	uncharacterized protein LOC103494783 OS=Cucumis melo OX=3656 GN=LOC103494783 PE=...	[more]

BLAST of CmoCh01G003320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948590.1	8.7e-154	88.03	uncharacterized protein LOC111452220 [Cucurbita moschata]	[more]
XP_023524850.1	5.8e-150	86.41	uncharacterized protein LOC111788655 [Cucurbita pepo subsp. pepo]	[more]
KAG6606968.1	3.0e-146	86.27	Alkylated DNA repair protein ALKBH8-like protein, partial [Cucurbita argyrosperm...	[more]
XP_022998149.1	1.5e-142	86.87	uncharacterized protein LOC111492881 [Cucurbita maxima]	[more]
XP_023524598.1	1.1e-132	82.83	uncharacterized protein LOC111788493 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh01G003320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02485.1	2.3e-67	50.34	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT1G31600.1	8.8e-11	38.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G31600.2	8.8e-11	38.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G31600.3	8.8e-11	38.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037151	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	GENE3D	2.60.120.590		coord: 55..308 e-value: 4.8E-31 score: 109.8
None	No IPR available	PANTHER	PTHR13069	UNCHARACTERIZED	coord: 18..166 coord: 199..307
None	No IPR available	PANTHER	PTHR13069:SF32	ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 8 ISOFORM X1	coord: 18..166
None	No IPR available	PANTHER	PTHR13069:SF32	ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 8 ISOFORM X1	coord: 199..307
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 53..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G003320.1	CmoCh01G003320.1	mRNA