Cmc12g0328021 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGACAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTACCAGTTACAACGGCTACCGTGGAGAGCACATTTTCTGCTACGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTATAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCAATTTCAAAATATGAAATCTCGTAGGGGACAATTATGA ATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGACAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTACCAGTTACAACGGCTACCGTGGAGAGCACATTTTCTGCTACGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTATAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCAATTTCAAAATATGAAATCTCGTAGGGGACAATTATGA ATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGACAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTACCAGTTACAACGGCTACCGTGGAGAGCACATTTTCTGCTACGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTATAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCAATTTCAAAATATGAAATCTCGTAGGGGACAATTATGA MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQL Homology
BLAST of Cmc12g0328021 vs. NCBI nr
Match: XP_008449194.1 (PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo]) HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40 Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 0
BLAST of Cmc12g0328021 vs. NCBI nr
Match: TYK00355.1 (copia-type polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 154.8 bits (390), Expect = 3.9e-34 Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Cmc12g0328021 vs. NCBI nr
Match: KAA0066112.1 (Dimer_Tnp_hAT domain-containing protein [Cucumis melo var. makuwa] >TYK15151.1 Dimer_Tnp_hAT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 139.8 bits (351), Expect = 1.3e-29 Identity = 70/101 (69.31%), Postives = 85/101 (84.16%), Query Frame = 0
BLAST of Cmc12g0328021 vs. NCBI nr
Match: XP_030487038.1 (zinc finger MYM-type protein 1-like [Cannabis sativa]) HSP 1 Score: 139.0 bits (349), Expect = 2.2e-29 Identity = 69/101 (68.32%), Postives = 86/101 (85.15%), Query Frame = 0
BLAST of Cmc12g0328021 vs. NCBI nr
Match: XP_030498012.1 (zinc finger MYM-type protein 1-like [Cannabis sativa]) HSP 1 Score: 138.7 bits (348), Expect = 2.9e-29 Identity = 68/101 (67.33%), Postives = 86/101 (85.15%), Query Frame = 0
BLAST of Cmc12g0328021 vs. ExPASy TrEMBL
Match: A0A1S3BM43 (uncharacterized protein LOC103491145 OS=Cucumis melo OX=3656 GN=LOC103491145 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40 Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 0
BLAST of Cmc12g0328021 vs. ExPASy TrEMBL
Match: A0A5D3BMQ7 (Copia-type polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00190 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34 Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Cmc12g0328021 vs. ExPASy TrEMBL
Match: A0A5A7VCQ2 (Dimer_Tnp_hAT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00160 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.3e-30 Identity = 70/101 (69.31%), Postives = 85/101 (84.16%), Query Frame = 0
BLAST of Cmc12g0328021 vs. ExPASy TrEMBL
Match: A0A443P243 (Dimer_Tnp_hAT domain-containing protein/DUF4371 domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01372400 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 9.1e-29 Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 0
BLAST of Cmc12g0328021 vs. ExPASy TrEMBL
Match: A0A6P5TRY7 (uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28 Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 0
BLAST of Cmc12g0328021 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 95.5 bits (236), Expect = 2.6e-20 Identity = 48/101 (47.52%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of Cmc12g0328021 vs. TAIR 10
Match: AT3G29765.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 93.6 bits (231), Expect = 9.9e-20 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of Cmc12g0328021 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 90.5 bits (223), Expect = 8.4e-19 Identity = 45/97 (46.39%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Cmc12g0328021 vs. TAIR 10
Match: AT2G06541.2 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 90.5 bits (223), Expect = 8.4e-19 Identity = 45/97 (46.39%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Cmc12g0328021 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 9.6e-07 Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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