Cmc12g0325651 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0325651
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RPM1-interacting protein 4-like
Location	CMiso1.1chr12: 15840176 .. 15841683 (-)
RNA-Seq Expression	Cmc12g0325651
Synteny	Cmc12g0325651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGATTAGACGACTCAAATAATAATCTCTTCGAAAGAAACTTATAGCAAACAAACAGAAGATTACCCACAAGAGAAACAAAGCAAAAGCCAAAACACAATAAACACATCGACAGCTAACTTAGAAACCATCGAACTATAATTGTCTGATAAGAAACAAAAAACTTCCAATACCTCCTTACTCCTCCATCTTCTTTTCTTCTCTAACAATACAAATTCTTCCATACTCCGCCGTTCCCGTCATTGCCGTTGCCGCCGCAGCAACCAAGGAGCTGCCACAGCTCATGGCAGTGAGTGTTTTCTTGTTCTTATTTGTTTCTCTTCTTTTTCCAGCAACATAAAAACCAAAACAAAACCCAACTGCGTAAATGATATCGTGGACGTGGAATTATTAATTAGAAGTAAGTTTGTGTCAATCTTCAATTAATTTAATGTAATGGGCAGGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTAGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGGTACCTCCTCTTTTTTCTTTTTCATGTTTCTATTAATTTAGGTTATGTTTCTTAATTATTTGGTCATTTCATGAAAACTTTACATCTTTGGTTTGTAAAATTTGTTAATTTTTTTTTTTAGAAAAAATATATATGAAATTTAAAAGCAAAACAAACAATAAGTTGTAAATTATGAAATGATTTTTAAAGTTTTGTTTTTAAATAGTGAAATAATTATTTTGTTTATTTATGCAGATATGCTGTTGTTTAGGTCCAAATTAGTGAAGCACATCATCACTGCTCCAAGAATAGACTCAAAACGATGCATCCATATTGCTGATTTTTCCACTTTTATAAAATCTAATCTATATCCCTTCTTCTTGTATTTTGATTAAATATCAATAATAATTATACTTAGCTTAAATTATAAATAAAAATTATTATTATA

mRNA sequence

ACGATTAGACGACTCAAATAATAATCTCTTCGAAAGAAACTTATAGCAAACAAACAGAAGATTACCCACAAGAGAAACAAAGCAAAAGCCAAAACACAATAAACACATCGACAGCTAACTTAGAAACCATCGAACTATAATTGTCTGATAAGAAACAAAAAACTTCCAATACCTCCTTACTCCTCCATCTTCTTTTCTTCTCTAACAATACAAATTCTTCCATACTCCGCCGTTCCCGTCATTGCCGTTGCCGCCGCAGCAACCAAGGAGCTGCCACAGCTCATGGCAGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTAGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGATATGCTGTTGTTTAGGTCCAAATTAGTGAAGCACATCATCACTGCTCCAAGAATAGACTCAAAACGATGCATCCATATTGCTGATTTTTCCACTTTTATAAAATCTAATCTATATCCCTTCTTCTTGTATTTTGATTAAATATCAATAATAATTATACTTAGCTTAAATTATAAATAAAAATTATTATTATA

Coding sequence (CDS)

ATGGCAGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTAGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGATATGCTGTTGTTTAGGTCCAAATTAG

Protein sequence

MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIPADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN

Homology

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BLAST of Cmc12g0325651 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 7.5e-123
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 224
           NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 223

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BLAST of Cmc12g0325651 vs. NCBI nr
Match: KAA0054298.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 431.8 bits (1109), Expect = 3.6e-117
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKI 217
           NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK+
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKV 216

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BLAST of Cmc12g0325651 vs. NCBI nr
Match: XP_011660296.1 (RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_007241 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 6.2e-109
Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI+FENARELQAAG+TFDPNDPDTYPP   ANQNS P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           A+HHR+HDG+DSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P TVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ+GGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 223
           + Q+VP LMNQTKQP+TQTTV K+S+ GSTSF SKICCCL P
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYP 222

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BLAST of Cmc12g0325651 vs. NCBI nr
Match: XP_038895249.1 (RPM1-interacting protein 4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 3.1e-92
Identity = 187/228 (82.02%), Postives = 194/228 (85.09%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGV FDPNDPDTYPPA   NQNS P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120
           ADH       D HQRRE+ NSGSEKLSSERS SDYALLK AKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 121 SPTTV----DGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180
           +PTT      GKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKICCCLGP 223
           IGGSNNPQ VPPLMNQTK+ P+ QTT   T T GS SFVSKICCCL P
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTAT-THGSNSFVSKICCCLCP 222

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BLAST of Cmc12g0325651 vs. NCBI nr
Match: XP_038895247.1 (RPM1-interacting protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 335.9 bits (860), Expect = 2.7e-88
Identity = 181/222 (81.53%), Postives = 189/222 (85.14%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGV FDPNDPDTYPPA   NQNS P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120
           ADH       D HQRRE+ NSGSEKLSSERS SDYALLK AKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 121 SPTTV----DGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180
           +PTT      GKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKI 217
           IGGSNNPQ VPPLMNQTK+ P+ QTT   T T GS SFVSK+
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTAT-THGSNSFVSKV 216

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BLAST of Cmc12g0325651 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.5e-17
Identity = 66/221 (29.86%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTIFFENARELQAAG-VTFDPNDPDTYPPAVFANQNSIPADHHR 67
           S+VPKFGNW++++ VPYT +F+ AR+ +A G    +PNDP+    +        P+   +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  HHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPTT 127
               +   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLG 222
           +  +  P    ++ P   ++                CCC G
Sbjct: 184 SGSSRTPTHQSSRNPNNTSS----------------CCCFG 207

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BLAST of Cmc12g0325651 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of Cmc12g0325651 vs. ExPASy Swiss-Prot
Match: Q8S3M3 (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05
Identity = 52/218 (23.85%), Postives = 84/218 (38.53%), Query Frame = 0


Query: 8   SHVPKFGNWDSDDVPYTIFFENA-RELQAAGVTFDPNDPDTYPPAVF------------A 67
           +HVPKFGNWD +++ YT +FE   R+       F+PNDP+  P A +             
Sbjct: 5   AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDHQHSEK 64

Query: 68  NQNSIPAD----------HHRHHDGE--------------------DSHQRREIVNSGSE 127
           + N    D          HHR  D E                    DSH+ R    S + 
Sbjct: 65  HHNDTSTDYHVVKQHRRKHHRREDREFHRYVEAPRPHRSPFQGVDMDSHRSRNHGTSATM 124

Query: 128 KLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMA 180
             S +R+  ++     +    ++ N + AEG S    TT      ++ ++ R       +
Sbjct: 125 SSSVKRNSDNWL---PQHQHHRRTNKDLAEGKSWLFTTTTASSYTKSRKLSRECSSTTQS 184

[Close]

BLAST of Cmc12g0325651 vs. ExPASy TrEMBL
Match: A0A1S3C9P5 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.6e-123
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 224
           NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 223

[Close]

BLAST of Cmc12g0325651 vs. ExPASy TrEMBL
Match: A0A5A7UH42 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001090 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.7e-117
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKI 217
           NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK+
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKV 216

[Close]

BLAST of Cmc12g0325651 vs. ExPASy TrEMBL
Match: A0A0A0M0M0 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109
Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI+FENARELQAAG+TFDPNDPDTYPP   ANQNS P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           A+HHR+HDG+DSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P TVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ+GGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 223
           + Q+VP LMNQTKQP+TQTTV K+S+ GSTSF SKICCCL P
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYP 222

[Close]

BLAST of Cmc12g0325651 vs. ExPASy TrEMBL
Match: A0A6J1CND0 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.2e-70
Identity = 154/228 (67.54%), Postives = 172/228 (75.44%), Query Frame = 0


Query: 5   KSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVF--ANQNSIPAD 64
           KSSSHVPKFGNWD+DDVPYTI FENA EL+AAGVTFDPNDPDTYPP  F  AN  S P+D
Sbjct: 4   KSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAFPAANHRSNPSD 63

Query: 65  HHRHHDGEDSHQR------REIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGM 124
             RHH   D H+R      R+  +SGSEKLSSERS SDY+LLK +  GR+KK +NG +G+
Sbjct: 64  RRRHH---DHHRRPREQPNRDRRSSGSEKLSSERSGSDYSLLK-EPGGRRKKINNGVDGI 123

Query: 125 SRFSPTTVDGKGNRNPRVR-RNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 184
           SRF PT     GN NP  R R NEGEM+ASVPKFGSWD RDPKSGDGYTAIFNKVK+EK+
Sbjct: 124 SRFPPTAAGHGGNPNPNPRARRNEGEMVASVPKFGSWDARDPKSGDGYTAIFNKVKMEKK 183

Query: 185 IGGSNNPQTVPPLMNQTK-QPMTQTTVAKTSTQGSTSFVSKICCCLGP 223
           IGGSN+ Q VPPL NQTK QP+ Q         GSTSFVSK+CCCL P
Sbjct: 184 IGGSNSSQAVPPLTNQTKQQPIPQI------VHGSTSFVSKVCCCLCP 221

[Close]

BLAST of Cmc12g0325651 vs. ExPASy TrEMBL
Match: A0A6J1GSU2 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.1e-62
Identity = 137/220 (62.27%), Postives = 152/220 (69.09%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSS HVPKFGNWD+DDVPYTI FENAREL+AAG+TFDPNDPDTYPP VF       
Sbjct: 1   MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDG 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
            +H R    + + +R  I+NSGSEKLSSERS SDYALL       KK   NG EG+SR +
Sbjct: 61  GEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALL-------KKSKENGVEGISRLA 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P      GN              ASVPKFGSWD RDPKSGDGYTAIFNK+KIEKQI  S 
Sbjct: 121 PAVAGHGGN-------------PASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAAS- 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCL 221
           NPQ+VPPLMN+TKQP+  T     +T G TSF SKICCCL
Sbjct: 181 NPQSVPPLMNKTKQPIAHT----NTTSGFTSFASKICCCL 195

[Close]

BLAST of Cmc12g0325651 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 89.0 bits (219), Expect = 5.3e-18
Identity = 66/221 (29.86%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTIFFENARELQAAG-VTFDPNDPDTYPPAVFANQNSIPADHHR 67
           S+VPKFGNW++++ VPYT +F+ AR+ +A G    +PNDP+    +        P+   +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  HHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPTT 127
               +   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLG 222
           +  +  P    ++ P   ++                CCC G
Sbjct: 184 SGSSRTPTHQSSRNPNNTSS----------------CCCFG 207

[Close]

BLAST of Cmc12g0325651 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of Cmc12g0325651 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]

BLAST of Cmc12g0325651 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]

BLAST of Cmc12g0325651 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG-SNNPQTVPPLMNQ 192
           +PKFG WDV DP S +G+T IFNK + EK+ GG S++P    P  N+
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNK 54

The following BLAST results are available for this feature:

BLAST of Cmc12g0325651 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458983.1	7.5e-123	100.00	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
KAA0054298.1	3.6e-117	99.54	RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-inte...	[more]
XP_011660296.1	6.2e-109	89.64	RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Cs...	[more]
XP_038895249.1	3.1e-92	82.02	RPM1-interacting protein 4-like isoform X2 [Benincasa hispida]	[more]
XP_038895247.1	2.7e-88	81.53	RPM1-interacting protein 4-like isoform X1 [Benincasa hispida]	[more]

BLAST of Cmc12g0325651 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	7.5e-17	29.86	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
O22633	1.3e-05	60.61	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8S3M3	2.3e-05	23.85	NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1	[more]

BLAST of Cmc12g0325651 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9P5	3.6e-123	100.00	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=...	[more]
A0A5A7UH42	1.7e-117	99.54	RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0M0M0	3.0e-109	89.64	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G69...	[more]
A0A6J1CND0	1.2e-70	67.54	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 P...	[more]
A0A6J1GSU2	2.1e-62	62.27	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE...	[more]

BLAST of Cmc12g0325651 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	5.3e-18	29.86	RPM1 interacting protein 4	[more]
AT5G55850.1	9.4e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	9.4e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	9.4e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	1.6e-06	51.06	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 144..175 e-value: 7.0E-15 score: 54.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..112
None	No IPR available	PANTHER	PTHR33159:SF49	OS06G0636100 PROTEIN	coord: 5..222
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 5..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0325651.1	Cmc12g0325651.1	mRNA