Cmc12g0316271 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0316271
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Copper transporter
Location	CMiso1.1chr12: 1340566 .. 1341978 (+)
RNA-Seq Expression	Cmc12g0316271
Synteny	Cmc12g0316271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCATTTATAGCTATAAAATAAGTGAATTGGATTAATCATTTCTCTCAAAGTCAACAAACAAACCAAAAAGATTGCAAAATGGAACAAAAAACAACAATCTTAATTCTTTGTTTTGTAATTTTTCTGTCCGTCTTTTCCAAATCCAACGCTACCAATGTTCTTTTTCCCACCCACGACGGCATGCACATGGACTCTCCGCCGCCGCCGATGTCTCCGACGAGCAGAGGCTCCGGCGACGACCTGCACACTCACGACATGATGTCACCGGCAATGCACATGACTTTCTTCTGGGGAAAAAACACACAAGTTTTGTTTTCCGGCTGGCCCGGGGACCGGTCCGGCATGTATGCAGTGGCGCTGGTGTTCGTCTTTTTGCTAGCGGTGGCGGTCGAGTGGCTGTCGTGTTGGCGGGTGATGACGGAGGCAGGGCCGAGAAATGTGGCGGCCGGAATCGTGCAGACGGCGGTGCATGGGATAAGAATGGGGATTGCGTATTTGGTGATGCTTGCTTTGATGTCGTTCAACGGGGGCGTTTTCATCGTCGCCGTCGCCGGACATATGGTTGGGTTTTTGGTTTTCGGAAGCAGAGTTGTGAAGAAGGAGAAATCATCGGCGTACGATCAGGGAAGTGCCGATCTTCCATCTAGGGTTTGCTGACCAAATTATATATTTGATCAAAAGTTACATGTGAATTTTACTAATTTTCGTTATTTTTTATCTAATATTCTCTTCTCTATTTTTTTTTGACTTGTTTTTTATTTGAAATATTCATAGGGTTTTGTTGAGTTTTTTTAAAAATGAAAGTAAACATTTATAGAGTCCAAAATTAGGTTATATTTGATAAATATTTTGATATATACAAGCGATTTCATGTAACTATTTTGCTTATTTTGCCTTTTTTTCCTCTTTTTTTTTTCCCACATTTAATCAATTTATTAACGTCTTCTTTTGCTAAAAAAATATCAAATTTGAAAGTAAACTTAATTTGTAAATAGAGATGGTTGATACCAAAATTTGGTCAAAGAAATTACATTACCTTATTCTTGCTCCAATGGTAAATCTATTATAACTTTCGAGAAAAAAGTTAACCTTGAAAGGAAAGAGGAGAAAAGGCTTAATTTGGTGGCAAAATTAGATGGAGAAAATCATATAAAATATAAAACGAACATTTTCGTAAGAAATTGAGAATATTTATGGTTTTTTCAAATAAGACAGACACGACGGAAGTTGATATTTTATAATAAAATCTATAAAATAAATAAGAAAATAAGAAAATTATTTTTTAAAATTTCGTGGATAATTTAACAAATATGAGGTAAGTTATATTACATAAACACTTATAACTAGTAGCAATTCAGGGTTAGTATCTCAAACAATGTACAATGAGTGACATATGACACTTTGATACTA

mRNA sequence

CTTCCATTTATAGCTATAAAATAAGTGAATTGGATTAATCATTTCTCTCAAAGTCAACAAACAAACCAAAAAGATTGCAAAATGGAACAAAAAACAACAATCTTAATTCTTTGTTTTGTAATTTTTCTGTCCGTCTTTTCCAAATCCAACGCTACCAATGTTCTTTTTCCCACCCACGACGGCATGCACATGGACTCTCCGCCGCCGCCGATGTCTCCGACGAGCAGAGGCTCCGGCGACGACCTGCACACTCACGACATGATGTCACCGGCAATGCACATGACTTTCTTCTGGGGAAAAAACACACAAGTTTTGTTTTCCGGCTGGCCCGGGGACCGGTCCGGCATGTATGCAGTGGCGCTGGTGTTCGTCTTTTTGCTAGCGGTGGCGGTCGAGTGGCTGTCGTGTTGGCGGGTGATGACGGAGGCAGGGCCGAGAAATGTGGCGGCCGGAATCGTGCAGACGGCGGTGCATGGGATAAGAATGGGGATTGCGTATTTGGTGATGCTTGCTTTGATGTCGTTCAACGGGGGCGTTTTCATCGTCGCCGTCGCCGGACATATGGTTGGGTTTTTGGTTTTCGGAAGCAGAGTTGTGAAGAAGGAGAAATCATCGGCGTACGATCAGGGAAGTGCCGATCTTCCATCTAGGGTTTGCTGACCAAATTATATATTTGATCAAAAGTTACATGTGAATTTTACTAATTTTCGTTATTTTTTATCTAATATTCTCTTCTCTATTTTTTTTTGACTTGTTTTTTATTTGAAATATTCATAGGGTTTTGTTGAGTTTTTTTAAAAATGAAAGTAAACATTTATAGAGTCCAAAATTAGGTTATATTTGATAAATATTTTGATATATACAAGCGATTTCATGTAACTATTTTGCTTATTTTGCCTTTTTTTCCTCTTTTTTTTTTCCCACATTTAATCAATTTATTAACGTCTTCTTTTGCTAAAAAAATATCAAATTTGAAAGTAAACTTAATTTGTAAATAGAGATGGTTGATACCAAAATTTGGTCAAAGAAATTACATTACCTTATTCTTGCTCCAATGGTAAATCTATTATAACTTTCGAGAAAAAAGTTAACCTTGAAAGGAAAGAGGAGAAAAGGCTTAATTTGGTGGCAAAATTAGATGGAGAAAATCATATAAAATATAAAACGAACATTTTCGTAAGAAATTGAGAATATTTATGGTTTTTTCAAATAAGACAGACACGACGGAAGTTGATATTTTATAATAAAATCTATAAAATAAATAAGAAAATAAGAAAATTATTTTTTAAAATTTCGTGGATAATTTAACAAATATGAGGTAAGTTATATTACATAAACACTTATAACTAGTAGCAATTCAGGGTTAGTATCTCAAACAATGTACAATGAGTGACATATGACACTTTGATACTA

Coding sequence (CDS)

ATGGAACAAAAAACAACAATCTTAATTCTTTGTTTTGTAATTTTTCTGTCCGTCTTTTCCAAATCCAACGCTACCAATGTTCTTTTTCCCACCCACGACGGCATGCACATGGACTCTCCGCCGCCGCCGATGTCTCCGACGAGCAGAGGCTCCGGCGACGACCTGCACACTCACGACATGATGTCACCGGCAATGCACATGACTTTCTTCTGGGGAAAAAACACACAAGTTTTGTTTTCCGGCTGGCCCGGGGACCGGTCCGGCATGTATGCAGTGGCGCTGGTGTTCGTCTTTTTGCTAGCGGTGGCGGTCGAGTGGCTGTCGTGTTGGCGGGTGATGACGGAGGCAGGGCCGAGAAATGTGGCGGCCGGAATCGTGCAGACGGCGGTGCATGGGATAAGAATGGGGATTGCGTATTTGGTGATGCTTGCTTTGATGTCGTTCAACGGGGGCGTTTTCATCGTCGCCGTCGCCGGACATATGGTTGGGTTTTTGGTTTTCGGAAGCAGAGTTGTGAAGAAGGAGAAATCATCGGCGTACGATCAGGGAAGTGCCGATCTTCCATCTAGGGTTTGCTGA

Protein sequence

MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC

Homology

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BLAST of Cmc12g0316271 vs. NCBI nr
Match: XP_008457428.1 (PREDICTED: copper transporter 2-like [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 7.4e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM 60
           MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM
Sbjct: 1   MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM 60

Query: 61  MSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRN 120
           MSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRN
Sbjct: 61  MSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRN 120

Query: 121 VAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAY 180
           VAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAY
Sbjct: 121 VAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAY 180

Query: 181 DQGSADLPSRVC 193
           DQGSADLPSRVC
Sbjct: 181 DQGSADLPSRVC 192

[Close]

BLAST of Cmc12g0316271 vs. NCBI nr
Match: XP_004145276.3 (LOW QUALITY PROTEIN: copper transporter 6 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-90
Identity = 174/193 (90.16%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MEQKTT-ILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHD 60
           MEQKTT IL LCFVIFLSV SKS+ATNVL PTHDGMHMD PPPP++PTSRGSGDD+HTHD
Sbjct: 1   MEQKTTAILTLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60

Query: 61  MMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPR 120
           MMS AMHMTFFWGKNTQVLFSGW     GMYAVALVFVFLLAVAVEWLSCWR+MTE GPR
Sbjct: 61  MMSSAMHMTFFWGKNTQVLFSGWLAGSVGMYAVALVFVFLLAVAVEWLSCWRMMTEVGPR 120

Query: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180
           NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA
Sbjct: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180

Query: 181 YDQGSADLPSRVC 193
           YDQG+ DLPSRVC
Sbjct: 181 YDQGTVDLPSRVC 193

[Close]

BLAST of Cmc12g0316271 vs. NCBI nr
Match: KAA0031769.1 (copper transporter 2-like [Cucumis melo var. makuwa] >TYJ97363.1 copper transporter 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 35  MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 94
           MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL
Sbjct: 1   MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 60

Query: 95  VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI 154
           VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI
Sbjct: 61  VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI 120

Query: 155 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 193
           VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC
Sbjct: 121 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 158

[Close]

BLAST of Cmc12g0316271 vs. NCBI nr
Match: XP_038895621.1 (copper transporter 6-like [Benincasa hispida])

HSP 1 Score: 304.7 bits (779), Expect = 5.7e-79
Identity = 154/180 (85.56%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 3   QKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDMMS 62
           +KT+ LILCFVI LSV SKSNATNV FPTHDGMHMDSPPPPM PTS  SGDD+H+H+MMS
Sbjct: 2   EKTSTLILCFVICLSVSSKSNATNV-FPTHDGMHMDSPPPPMGPTSGDSGDDMHSHEMMS 61

Query: 63  PAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRNVA 122
            AMHM+FFWGKNTQVLFSGWPGDRSGMY +ALVFVFLLAV VEWLS WRVMTEAGPRNVA
Sbjct: 62  AAMHMSFFWGKNTQVLFSGWPGDRSGMYVIALVFVFLLAVVVEWLSYWRVMTEAGPRNVA 121

Query: 123 AGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQ 182
           AGIVQTAVHGIRMGIAY+VMLALMSFNGGVFIVA+AGH VGFLVFGSRV+K  KSS  DQ
Sbjct: 122 AGIVQTAVHGIRMGIAYMVMLALMSFNGGVFIVAIAGHSVGFLVFGSRVLKTAKSSPDDQ 180

[Close]

BLAST of Cmc12g0316271 vs. NCBI nr
Match: XP_023525857.1 (copper transporter 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 4.0e-72
Identity = 142/196 (72.45%), Postives = 163/196 (83.16%), Query Frame = 0


Query: 1   MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM 60
           M+  T ILILCFVI +SV SK+NA +V FP HDGMH D PPPPM+P S GS DD+H+H M
Sbjct: 1   MKNTTKILILCFVISVSVSSKANAHDV-FPNHDGMHSDPPPPPMAPMSGGSDDDMHSHGM 60

Query: 61  MSPA----MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEA 120
            S +    MHMTFFWGKNTQVLFSGWPG++SGMYA+AL+ VFLLAV+VEWLS WR+MTE 
Sbjct: 61  PSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEM 120

Query: 121 GPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEK 180
           GPRN AAGIVQTAVHG+R+GIAY+VMLALMSFNGGVFI A+AGH  GFL+FGSRV+   K
Sbjct: 121 GPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVLNNTK 180

Query: 181 SSAYDQGSADLPSRVC 193
           S  YDQG+ADLPS VC
Sbjct: 181 SKPYDQGTADLPSGVC 195

[Close]

BLAST of Cmc12g0316271 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.6e-38
Identity = 90/163 (55.21%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 32  HDGMHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYA 91
           HD MH D PPP  SP+S    +    H MM   MHMTFFWGKNT+VLFSGWPG  SGMYA
Sbjct: 3   HDHMH-DMPPP--SPSSSSMSNHTTPHMMM---MHMTFFWGKNTEVLFSGWPGTSSGMYA 62

Query: 92  VALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGG 151
           + L+ +FLLAV  EWL+   ++  +G  N AAG+ QTAV+ ++ G++YLVMLA+MSFN G
Sbjct: 63  LCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAG 122

Query: 152 VFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADL--PSRVC 193
           VFIVA+AG+ VGF +FGS   KK      DQ +A+L  PS  C
Sbjct: 123 VFIVAIAGYGVGFFLFGSTTFKKPSD---DQKTAELLPPSSGC 156

[Close]

BLAST of Cmc12g0316271 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 5.3e-35
Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 32  HDGMH------MDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGD 91
           HD MH        S   P S  + GS ++   H  M   MHMTFFWGKNT+VLFSGWPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 92  RSGMYAVALVFVFLLAVAVEWLSCWRVM--TEAGPRNVAAGIVQTAVHGIRMGIAYLVML 151
            SGMYA+ L+FVF LAV  EWL+   ++  +     N AAG++QTAV+ +R+G+AYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 152 ALMSFNGGVFIVAVAGHMVGFLVFGSRVVK 174
           A+MSFN GVF+VA+AGH VGF++FGS+  +
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFR 152

[Close]

BLAST of Cmc12g0316271 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-33
Identity = 76/132 (57.58%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 42  PPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLA 101
           PP SP+S  +    HT+  M   MHMTFFWGKNT++LFSGWPG   GMY + L+ VFLLA
Sbjct: 7   PPSSPSSMVN----HTNSNMI-MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 66

Query: 102 VAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHM 161
           V VEWL+   ++   G  + A G+VQTAV+ ++ G+AYLVMLA+MSFNGGVFIVA+AG  
Sbjct: 67  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 126

Query: 162 VGFLVFGSRVVK 174
           VGF++FGS   K
Sbjct: 127 VGFMLFGSTAFK 133

[Close]

BLAST of Cmc12g0316271 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-28
Identity = 71/131 (54.20%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 44  MSPTSRGSGDDLHTHDMMSPA-MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAV 103
           MSP + G+        M S    HMTFFWGKN++VLF+ WPG R GMYA+AL+FVF LAV
Sbjct: 11  MSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAV 70

Query: 104 AVEWL------SCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVA 163
            VE+L      +C   +    P   A G+ + AVH +R+G+AYL+MLALMSFNGGVF+VA
Sbjct: 71  IVEFLGSRRADACLAALARRAP--AAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVA 130

Query: 164 VAGHMVGFLVF 168
           VAGH  GFL F
Sbjct: 131 VAGHAAGFLAF 139

[Close]

BLAST of Cmc12g0316271 vs. ExPASy Swiss-Prot
Match: Q60EN8 (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.0e-27
Identity = 69/139 (49.64%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 33  DGMHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAV 92
           +GM M  PP P+                 +  MHMTFFWGKNT+VLF+ WPG R GMYA+
Sbjct: 6   NGMAMPPPPAPVK---------------KARYMHMTFFWGKNTEVLFTLWPGARGGMYAL 65

Query: 93  ALVFVFLLAVAVEWLSC----WRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSF 152
           A++F+F LAV +E+        R+     PR  AA  ++TAVH +R+G+AYL+MLALMSF
Sbjct: 66  AILFMFALAVLLEFRGYRVLEARLARRRAPR--AAAALRTAVHAVRVGVAYLIMLALMSF 125

Query: 153 NGGVFIVAVAGHMVGFLVF 168
           NGGVF+  VAGH  GFL F
Sbjct: 126 NGGVFLAIVAGHAAGFLAF 127

[Close]

BLAST of Cmc12g0316271 vs. ExPASy TrEMBL
Match: A0A1S3C5H1 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.6e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM 60
           MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM
Sbjct: 1   MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM 60

Query: 61  MSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRN 120
           MSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRN
Sbjct: 61  MSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRN 120

Query: 121 VAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAY 180
           VAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAY
Sbjct: 121 VAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAY 180

Query: 181 DQGSADLPSRVC 193
           DQGSADLPSRVC
Sbjct: 181 DQGSADLPSRVC 192

[Close]

BLAST of Cmc12g0316271 vs. ExPASy TrEMBL
Match: A0A0A0LY50 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.0e-95
Identity = 179/193 (92.75%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MEQKTT-ILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHD 60
           MEQKTT IL LCFVIFLSV SKS+ATNVL PTHDGMHMD PPPP++PTSRGSGDD+HTHD
Sbjct: 1   MEQKTTAILTLCFVIFLSVSSKSDATNVLLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHD 60

Query: 61  MMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPR 120
           MMS AMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWR+MTE GPR
Sbjct: 61  MMSSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRMMTEVGPR 120

Query: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180
           NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA
Sbjct: 121 NVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSA 180

Query: 181 YDQGSADLPSRVC 193
           YDQG+ DLPSRVC
Sbjct: 181 YDQGTVDLPSRVC 193

[Close]

BLAST of Cmc12g0316271 vs. ExPASy TrEMBL
Match: A0A5D3BDI0 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001740 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.3e-84
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 35  MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 94
           MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL
Sbjct: 1   MHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVAL 60

Query: 95  VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI 154
           VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI
Sbjct: 61  VFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFI 120

Query: 155 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 193
           VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC
Sbjct: 121 VAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 158

[Close]

BLAST of Cmc12g0316271 vs. ExPASy TrEMBL
Match: A0A6J1KI42 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.5e-72
Identity = 142/196 (72.45%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM 60
           M+  T ILILC VI LSV SK+NA +V FP HDGMH D PPPPM P S GS DD+H+H M
Sbjct: 1   MKNTTKILILCLVISLSVSSKANAHDV-FPNHDGMHSDPPPPPMGPMSGGSDDDMHSHGM 60

Query: 61  MSPA----MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEA 120
            S +    MHMTFFWGKNTQVLFSGWPG++SGMYA+AL+ VFLLAV+VEWLS WR+MTE 
Sbjct: 61  PSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEM 120

Query: 121 GPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEK 180
           GPRN AAGIVQTAVHG+R+GIAY+VMLALMSFNGGVFI A+AGH  GFL+FGSRV K  K
Sbjct: 121 GPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTK 180

Query: 181 SSAYDQGSADLPSRVC 193
           S  YD G+ADLPS VC
Sbjct: 181 SKPYDPGTADLPSGVC 195

[Close]

BLAST of Cmc12g0316271 vs. ExPASy TrEMBL
Match: A0A6J1G9S4 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.1e-71
Identity = 141/196 (71.94%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MEQKTTILILCFVIFLSVFSKSNATNVLFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDM 60
           M+  T ILILC VI LSV SK+ A +V FP HDGMH D PPPPM P S GS DD+H+H M
Sbjct: 1   MKNTTKILILCLVISLSVSSKAKAHDV-FPNHDGMHSDPPPPPMGPMSGGSDDDMHSHGM 60

Query: 61  MSPA----MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEA 120
            S +    MHMTFFWGKNTQVLFSGWPG++SGMYA+AL+ VFLLAV+VEWLS WR+MTE 
Sbjct: 61  PSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEM 120

Query: 121 GPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEK 180
           GPRN AAGIVQTAVHG+R+GIAYLVMLALMSFNGGVFI A+AGH  GFL+FGSRV+   K
Sbjct: 121 GPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVMNNTK 180

Query: 181 SSAYDQGSADLPSRVC 193
           S  Y QG+ADLPS VC
Sbjct: 181 SKPYQQGTADLPSGVC 195

[Close]

BLAST of Cmc12g0316271 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 158.7 bits (400), Expect = 4.7e-39
Identity = 90/163 (55.21%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 32  HDGMHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYA 91
           HD MH D PPP  SP+S    +    H MM   MHMTFFWGKNT+VLFSGWPG  SGMYA
Sbjct: 3   HDHMH-DMPPP--SPSSSSMSNHTTPHMMM---MHMTFFWGKNTEVLFSGWPGTSSGMYA 62

Query: 92  VALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGG 151
           + L+ +FLLAV  EWL+   ++  +G  N AAG+ QTAV+ ++ G++YLVMLA+MSFN G
Sbjct: 63  LCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAG 122

Query: 152 VFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADL--PSRVC 193
           VFIVA+AG+ VGF +FGS   KK      DQ +A+L  PS  C
Sbjct: 123 VFIVAIAGYGVGFFLFGSTTFKKPSD---DQKTAELLPPSSGC 156

[Close]

BLAST of Cmc12g0316271 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 149.1 bits (375), Expect = 3.7e-36
Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 32  HDGMH------MDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGD 91
           HD MH        S   P S  + GS ++   H  M   MHMTFFWGKNT+VLFSGWPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 92  RSGMYAVALVFVFLLAVAVEWLSCWRVM--TEAGPRNVAAGIVQTAVHGIRMGIAYLVML 151
            SGMYA+ L+FVF LAV  EWL+   ++  +     N AAG++QTAV+ +R+G+AYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 152 ALMSFNGGVFIVAVAGHMVGFLVFGSRVVK 174
           A+MSFN GVF+VA+AGH VGF++FGS+  +
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFR 152

[Close]

BLAST of Cmc12g0316271 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 76/132 (57.58%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 42  PPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLA 101
           PP SP+S  +    HT+  M   MHMTFFWGKNT++LFSGWPG   GMY + L+ VFLLA
Sbjct: 7   PPSSPSSMVN----HTNSNMI-MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 66

Query: 102 VAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHM 161
           V VEWL+   ++   G  + A G+VQTAV+ ++ G+AYLVMLA+MSFNGGVFIVA+AG  
Sbjct: 67  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 126

Query: 162 VGFLVFGSRVVK 174
           VGF++FGS   K
Sbjct: 127 VGFMLFGSTAFK 133

[Close]

BLAST of Cmc12g0316271 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 121.3 bits (303), Expect = 8.4e-28
Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 33  DGMHMDSPPPPMSPTSRGSGDDLHTHDMMSPAMHMTFFWGKNTQVLFSGWPGDRSGMYAV 92
           +GM   SP  P +P+        H H  M   MHMTFFWGK T+VLF GWPG    MY V
Sbjct: 2   NGMSGSSPAAP-APSPSSFFQHRHRHGGM---MHMTFFWGKTTEVLFDGWPGTSLKMYWV 61

Query: 93  ALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNGGV 152
            L  +F+++   E LS    M ++GP ++  G++QTAV+ +R  ++YLVMLA+MSFNGGV
Sbjct: 62  CLAVIFVISAFSECLSRCGFM-KSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGV 121

Query: 153 FIVAVAGHMVGFLVFGSRVVKKEKSSAYDQ 183
           F+ A+AG  +GF++FGSR  +   S+++ +
Sbjct: 122 FVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Cmc12g0316271 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 108.2 bits (269), Expect = 7.3e-24
Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 65  MHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLS-CWRVMT-EAGPRNVA 124
           +H TF+WG N QVLFSGWPG   GMYA+AL+FVF LA   EWL+ C    + + G   +A
Sbjct: 30  LHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLA 89

Query: 125 AGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGHMVGFLVFGSRVVK 174
               +TA++ ++ G +YLV+LA++SFNGGVF+ A+ GH +GF VF  R  +
Sbjct: 90  KVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFR 140

The following BLAST results are available for this feature:

BLAST of Cmc12g0316271 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457428.1	7.4e-103	100.00	PREDICTED: copper transporter 2-like [Cucumis melo]	[more]
XP_004145276.3	1.9e-90	90.16	LOW QUALITY PROTEIN: copper transporter 6 [Cucumis sativus]	[more]
KAA0031769.1	1.7e-83	100.00	copper transporter 2-like [Cucumis melo var. makuwa] >TYJ97363.1 copper transpor...	[more]
XP_038895621.1	5.7e-79	85.56	copper transporter 6-like [Benincasa hispida]	[more]
XP_023525857.1	4.0e-72	72.45	copper transporter 6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc12g0316271 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STG2	6.6e-38	55.21	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q39065	5.3e-35	53.33	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q8GWP3	2.2e-33	57.58	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q94EE4	1.6e-28	54.20	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]
Q60EN8	9.0e-27	49.64	Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1	[more]

BLAST of Cmc12g0316271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5H1	3.6e-103	100.00	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1	[more]
A0A0A0LY50	8.0e-95	92.75	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1	[more]
A0A5D3BDI0	8.3e-84	100.00	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A6J1KI42	9.5e-72	72.45	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1	[more]
A0A6J1G9S4	8.1e-71	71.94	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1	[more]

BLAST of Cmc12g0316271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46900.1	4.7e-39	55.21	copper transporter 2	[more]
AT5G59030.1	3.7e-36	53.33	copper transporter 1	[more]
AT2G26975.1	1.6e-34	57.58	Ctr copper transporter family	[more]
AT5G59040.1	8.4e-28	44.67	copper transporter 3	[more]
AT2G37925.1	7.3e-24	49.55	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 123..167 e-value: 8.2E-8 score: 32.9 coord: 67..114 e-value: 1.6E-8 score: 35.3
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 36..188
None	No IPR available	PANTHER	PTHR12483:SF100	SUBFAMILY NOT NAMED	coord: 36..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0316271.1	Cmc12g0316271.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity