Cmc11g0302851 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0302851
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	LOB domain-containing protein
Location	CMiso1.1chr11: 24034452 .. 24037078 (+)
RNA-Seq Expression	Cmc11g0302851
Synteny	Cmc11g0302851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCTATATAACATCTTCCAACTTCTTCCTCATCGCTCCCTACTTTTCCTTTCTCTTTTCTTCTACTTCTAAAATAAACCTCCAGACTCTTATTTCCAAACCCAAATTTACCACAAAATTTGATACTTACGTTATTAAAACTATCACAATTTGCATTCTCTTAAAGAGAAATGAAGGAGATTAGTGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGCAAGCTTCTTCGCCGTAGATGTGCTCAAGATTGCGTTTTCGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGCGTTCATAAGGTCTTTGGAGCTAGTAATGTTAACAAGATGTTACAGGTTAGTAACTCAAATTATGATTCCTTAGATACACATTGGTTTAGTTTCTCTCTTCTTTTGAATGATTCATTTTCTTTCTCCCTTATGTTTAATTTGGTAATGTAATTAAACTAGTTTCTTTTTGATTGAAGGAAGTTTGGATTATTATAGAAGTGAGAGAGACTTGAATTTTGGCTTAACCTACTGCAGTAAACTCAAATTAGCGGTTAATTAAAATAATGAGTTAGATCATTTGTAGCCAATGAGGAGCCAACCATTCTATATTATCATATTATCCCTACTAACCACACACAAATTGACAAAACAGCCCACAATAACTTAAAAGAGAGAGAGAAAAAAAAGTAGGGTTTTATAAAAATAAATTTTTTTCATTTAAAAAAATTACAGGATATTTTTCCATTGGTGTTCCATCGTTTTCTCTTGCTTTTTTCACTTTGATAATAAGCCACACGACAAGATTAAACATCTCCTTCTCTCTCTTTCATACACTAATTAGTAATTTAATTACCATGATATTAACTTTTTCAAGGCAAAAGAAAATTTTCAACAACTACAAAACCGACACACTCAACCAATTAGAACCATGACGATAAGTCACTAATTATTATAAATCCATTTCAAATTACAATTTGAAATTGGATAATTAAACAAGATGGTAATGTAAATGTTAGGTATCTTCTATTTATTTTCCGTTATAGTGGTTAATTACGGTTGAGGAGCCCACTTTTTTTCCAAAAAAAAAAAAGAAAAAAAGAAAAGAAAAGAAAAAGAAAGTGTGTCTCTACTTTTTGAAAAAGCAAACCCTAAAATTGGTTGGAAGACCAATTCAGGAGATTCCTTAGCGTATGAAAGAGTAAAGAGGGATTGTTTTATTTTGTACTTAATAATTAATCAAACCATACTTTAATTAACTATACCCTTTGGTTAATTAACACTTAATGAAACCAAAGTATTATTTCAATTATGTTTTCATTAATTATTTAATCTCCTCAACTTTAGCCTTATAGCTTTTTCGTGAAATTACAATATCAACCTGAACCTTTTTTTTTTCTTTTTTTCTTTTTCGGTAGCTCCAAGAAGAAAGGTAAGATTCTATTTTTTTTTTTTTTAAATTTATTTTACTATATAAAATCAATATTATTTGTGTCATTCTAACATCATAATGACATCTAAAGTCCATTATTCATATAAATGTAATGTGAATATAGTTGGTATATACATTTTTTCTAAATTTTGTAACAACTAATAATAAAATATATTTGGTTGCTCGATCAATATATAATTCAATCCACTCGTCAAGAGAATGAATAGACAACGTTGTTGAATAAGTATCCAATTAAAACAATCCAAATGAGACTATTACTATACAAACTCTATAGCCTTATGAGACAACTTAAAGAAGATTCTTAACTAACTCCTTCAAGATTGTTTTTTTTTTGGATTTCCCATTCTTCAATTTAATATTTGTCGAATTTTCTAGGCTATGATACTATATTGGTAAACATTTCTATCTCAAATCTAATTGACAATAGAAAGTTAAAGTGACCATATATGTTATAAAAATTGTAAGGTTTCTTCGTATTATTTCCAATAAGGTATATTCCCAATTAACAGGAGCTACCGGAACAACAACGAAGCGATGCAGTAAGTTCGATGGTGTATGAGGCAAACGCAAGGGTACGAGATCCCGTGTATGGTTGTGTTGGAGCCATATCATCGTTACAACAACAGATTGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGCGGATGCGCCACATCCCGTCATCCTCTTACAACCCAACGATGGGCCACTCATCGGAAACCGCCTCGCCCTCCAGCAAGATGAACATTCCGGTGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCGTCTTGCTAGCTAATTAATTTTAAGCCCTTTAGGCGTGCGCTCTTTTGCCTTCACTTTTTTATTTTATTTTTTCCCTTCTTCTTATTTTTCCTAATTATCATTATAATGTGCTTTTCTTTATCATTATAATGGGGCTTGCTTTATTGTATGTTTGCTTTTATTAATACTTTTTTTTTCTTCTTTGGCTCTTTATAATATATATATGTAACTTTGTAGAAAAGAAAAGAAAAAAGAAAAAACAGTGCTACGCGGAGAGATTGTTATTATGATCATTATTGATAACCATATTGTAAATGCTAAAACAATTAATGTAATTAGATTATGAGGT

mRNA sequence

CTTCTCTATATAACATCTTCCAACTTCTTCCTCATCGCTCCCTACTTTTCCTTTCTCTTTTCTTCTACTTCTAAAATAAACCTCCAGACTCTTATTTCCAAACCCAAATTTACCACAAAATTTGATACTTACGTTATTAAAACTATCACAATTTGCATTCTCTTAAAGAGAAATGAAGGAGATTAGTGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGCAAGCTTCTTCGCCGTAGATGTGCTCAAGATTGCGTTTTCGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGCGTTCATAAGGTCTTTGGAGCTAGTAATGTTAACAAGATGTTACAGGAGCTACCGGAACAACAACGAAGCGATGCAGTAAGTTCGATGGTGTATGAGGCAAACGCAAGGGTACGAGATCCCGTGTATGGTTGTGTTGGAGCCATATCATCGTTACAACAACAGATTGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGCGGATGCGCCACATCCCGTCATCCTCTTACAACCCAACGATGGGCCACTCATCGGAAACCGCCTCGCCCTCCAGCAAGATGAACATTCCGGTGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCGTCTTGCTAGCTAATTAATTTTAAGCCCTTTAGGCGTGCGCTCTTTTGCCTTCACTTTTTTATTTTATTTTTTCCCTTCTTCTTATTTTTCCTAATTATCATTATAATGTGCTTTTCTTTATCATTATAATGGGGCTTGCTTTATTGTATGTTTGCTTTTATTAATACTTTTTTTTTCTTCTTTGGCTCTTTATAATATATATATGTAACTTTGTAGAAAAGAAAAGAAAAAAGAAAAAACAGTGCTACGCGGAGAGATTGTTATTATGATCATTATTGATAACCATATTGTAAATGCTAAAACAATTAATGTAATTAGATTATGAGGT

Coding sequence (CDS)

ATGAAGGAGATTAGTGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGCAAGCTTCTTCGCCGTAGATGTGCTCAAGATTGCGTTTTCGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGCGTTCATAAGGTCTTTGGAGCTAGTAATGTTAACAAGATGTTACAGGAGCTACCGGAACAACAACGAAGCGATGCAGTAAGTTCGATGGTGTATGAGGCAAACGCAAGGGTACGAGATCCCGTGTATGGTTGTGTTGGAGCCATATCATCGTTACAACAACAGATTGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGCGGATGCGCCACATCCCGTCATCCTCTTACAACCCAACGATGGGCCACTCATCGGAAACCGCCTCGCCCTCCAGCAAGATGAACATTCCGGTGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCGTCTTGCTAG

Protein sequence

MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

Homology

[Close]

BLAST of Cmc11g0302851 vs. NCBI nr
Match: KAA0054642.1 (LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 347.8 bits (891), Expect = 5.3e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Cmc11g0302851 vs. NCBI nr
Match: XP_004150042.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical protein Csa_020952 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 8.5e-90
Identity = 169/173 (97.69%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           RH PSSSYNPT GHS ETASPSSKMNIP PNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHFPSSSYNPTAGHSPETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Cmc11g0302851 vs. NCBI nr
Match: XP_038902133.1 (LOB domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 324.3 bits (830), Expect = 6.3e-85
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEI+GRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEINGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQID+LQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           R  PSSS N T+GHS ETASPS KMNIP PNKSYFSMDMVDHD+MGE+LWSSC
Sbjct: 121 RQFPSSSCNLTIGHSPETASPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 173

[Close]

BLAST of Cmc11g0302851 vs. NCBI nr
Match: XP_022149611.1 (LOB domain-containing protein 4 [Momordica charantia])

HSP 1 Score: 285.0 bits (728), Expect = 4.2e-73
Identity = 147/173 (84.97%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQGT LSPCAACKLLRRRCA DCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKESSGRKQGT-LSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANAR+RDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           R  PS+S  P+  HS ETA    K+NIP  NKS+F+MDMV HD+MGE+LWSSC
Sbjct: 121 RQFPSTS-TPSAAHSPETA---GKLNIPAQNKSFFTMDMVGHDNMGESLWSSC 168

[Close]

BLAST of Cmc11g0302851 vs. NCBI nr
Match: XP_022947417.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >XP_022970811.1 LOB domain-containing protein 4-like [Cucurbita maxima] >KAG6604717.1 LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034846.1 LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.3 bits (726), Expect = 7.2e-73
Identity = 149/173 (86.13%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           R   SSS NPT GHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of Cmc11g0302851 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.6e-59
Identity = 127/175 (72.57%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE S RKQG + SPCAACKLLRRRCAQDCVF+PYFPADEP KFA+VH+VFGASNVNKML
Sbjct: 1   MKE-SSRKQGAA-SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELP  QR DAVSSMVYEANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 R---HIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS-MDMVDHDSMGETLWS 172
           R   + P     P    SS   SPSSK   P  NK  FS MD+VD  S+GE++WS
Sbjct: 121 RQSTNFPGHGLCPDSPSSS--GSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of Cmc11g0302851 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.6e-45
Identity = 97/170 (57.06%), Postives = 119/170 (70.00%), Query Frame = 0


Query: 6   GRKQGTSLSPCAACKLLRRRCAQD-CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELP 65
           G + G ++SPCA CKLLRR+C +D CVFAPYFPA EP+KFA VHK+FGASNVNKMLQEL 
Sbjct: 5   GHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELS 64

Query: 66  EQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIP 125
           E  RSDAV SMVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R  H  
Sbjct: 65  ENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLH-- 124

Query: 126 SSSYNPTMGHSSETASPSSKMNIPVPNKSYFS---MDMVDHDSMGETLWS 172
                    H+      +S +  P  NK ++S   M +   D  G+ LWS
Sbjct: 125 -------RIHTKPPPYTASTVTFP-SNKDFYSDIDMAVAYTDDAGDFLWS 164

[Close]

BLAST of Cmc11g0302851 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 7.3e-44
Identity = 84/116 (72.41%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 10  GTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRS 69
           G   SPCA+CKLLRRRCA+DC+FAPYFP D+PHKFA VHKVFGASNV+KMLQELP  QR+
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  DAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPS 126
           DAV+S+V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M++ P+
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPT 118

[Close]

BLAST of Cmc11g0302851 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 5.4e-39
Identity = 76/122 (62.30%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 12  SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDA 71
           +++PCAACKLLRRRCAQ+C F+PYF   EPHKFASVHKVFGASNV+KML E+PE QR+DA
Sbjct: 42  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADA 101

Query: 72  VSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------IPS 128
            +S+VYEAN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R       +PS
Sbjct: 102 ANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPS 161

[Close]

BLAST of Cmc11g0302851 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.6e-37
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 13  LSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAV 72
           LSPCAACK+LRRRCA+ CV APYFP  +P KF   H+VFGASN+ K LQELPE QR+DAV
Sbjct: 31  LSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 90

Query: 73  SSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR 122
           +SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+V+M+ +
Sbjct: 91  NSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQ 139

[Close]

BLAST of Cmc11g0302851 vs. ExPASy TrEMBL
Match: A0A5D3CBA3 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00510 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.6e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Cmc11g0302851 vs. ExPASy TrEMBL
Match: A0A0A0KBA8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.1e-90
Identity = 169/173 (97.69%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           RH PSSSYNPT GHS ETASPSSKMNIP PNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHFPSSSYNPTAGHSPETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Cmc11g0302851 vs. ExPASy TrEMBL
Match: A0A6J1D8X3 (LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 147/173 (84.97%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQGT LSPCAACKLLRRRCA DCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKESSGRKQGT-LSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANAR+RDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           R  PS+S  P+  HS ETA    K+NIP  NKS+F+MDMV HD+MGE+LWSSC
Sbjct: 121 RQFPSTS-TPSAAHSPETA---GKLNIPAQNKSFFTMDMVGHDNMGESLWSSC 168

[Close]

BLAST of Cmc11g0302851 vs. ExPASy TrEMBL
Match: A0A6J1I1K8 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469678 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.5e-73
Identity = 149/173 (86.13%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           R   SSS NPT GHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of Cmc11g0302851 vs. ExPASy TrEMBL
Match: A0A6J1G6E3 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451283 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.5e-73
Identity = 149/173 (86.13%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 174
           R   SSS NPT GHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of Cmc11g0302851 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 229.2 bits (583), Expect = 2.6e-60
Identity = 127/175 (72.57%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE S RKQG + SPCAACKLLRRRCAQDCVF+PYFPADEP KFA+VH+VFGASNVNKML
Sbjct: 1   MKE-SSRKQGAA-SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELP  QR DAVSSMVYEANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 R---HIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS-MDMVDHDSMGETLWS 172
           R   + P     P    SS   SPSSK   P  NK  FS MD+VD  S+GE++WS
Sbjct: 121 RQSTNFPGHGLCPDSPSSS--GSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of Cmc11g0302851 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 181.8 bits (460), Expect = 4.7e-46
Identity = 97/170 (57.06%), Postives = 119/170 (70.00%), Query Frame = 0


Query: 6   GRKQGTSLSPCAACKLLRRRCAQD-CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELP 65
           G + G ++SPCA CKLLRR+C +D CVFAPYFPA EP+KFA VHK+FGASNVNKMLQEL 
Sbjct: 5   GHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELS 64

Query: 66  EQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIP 125
           E  RSDAV SMVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R  H  
Sbjct: 65  ENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLH-- 124

Query: 126 SSSYNPTMGHSSETASPSSKMNIPVPNKSYFS---MDMVDHDSMGETLWS 172
                    H+      +S +  P  NK ++S   M +   D  G+ LWS
Sbjct: 125 -------RIHTKPPPYTASTVTFP-SNKDFYSDIDMAVAYTDDAGDFLWS 164

[Close]

BLAST of Cmc11g0302851 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.2e-45
Identity = 84/116 (72.41%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 10  GTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRS 69
           G   SPCA+CKLLRRRCA+DC+FAPYFP D+PHKFA VHKVFGASNV+KMLQELP  QR+
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  DAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPS 126
           DAV+S+V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M++ P+
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPT 118

[Close]

BLAST of Cmc11g0302851 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-40
Identity = 76/122 (62.30%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 12  SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDA 71
           +++PCAACKLLRRRCAQ+C F+PYF   EPHKFASVHKVFGASNV+KML E+PE QR+DA
Sbjct: 42  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADA 101

Query: 72  VSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------IPS 128
            +S+VYEAN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R       +PS
Sbjct: 102 ANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPS 161

[Close]

BLAST of Cmc11g0302851 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 155.2 bits (391), Expect = 4.7e-38
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 13  LSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAV 72
           LSPCAACK+LRRRCA+ CV APYFP  +P KF   H+VFGASN+ K LQELPE QR+DAV
Sbjct: 31  LSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 90

Query: 73  SSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR 122
           +SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+V+M+ +
Sbjct: 91  NSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQ 139

The following BLAST results are available for this feature:

BLAST of Cmc11g0302851 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054642.1	5.3e-92	100.00	LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB ...	[more]
XP_004150042.1	8.5e-90	97.69	LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical prote...	[more]
XP_038902133.1	6.3e-85	93.06	LOB domain-containing protein 4-like [Benincasa hispida]	[more]
XP_022149611.1	4.2e-73	84.97	LOB domain-containing protein 4 [Momordica charantia]	[more]
XP_022947417.1	7.2e-73	86.13	LOB domain-containing protein 4-like [Cucurbita moschata] >XP_022970811.1 LOB do...	[more]

BLAST of Cmc11g0302851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE9	3.6e-59	72.57	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9SA51	6.6e-45	57.06	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q8LBW3	7.3e-44	72.41	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	5.4e-39	62.30	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9LQR0	6.6e-37	67.89	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]

BLAST of Cmc11g0302851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CBA3	2.6e-92	100.00	LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KBA8	4.1e-90	97.69	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV...	[more]
A0A6J1D8X3	2.0e-73	84.97	LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 P...	[more]
A0A6J1I1K8	3.5e-73	86.13	LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469678...	[more]
A0A6J1G6E3	3.5e-73	86.13	LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114512...	[more]

BLAST of Cmc11g0302851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31320.1	2.6e-60	72.57	LOB domain-containing protein 4	[more]
AT1G16530.1	4.7e-46	57.06	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G30130.1	5.2e-45	72.41	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	3.8e-40	62.30	LOB domain-containing protein 15	[more]
AT1G07900.1	4.7e-38	67.89	LOB domain-containing protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..145
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 3..168
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 3..168
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 1.0E-43 score: 147.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 27.38965

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0302851.1	Cmc11g0302851.1	mRNA