Cmc11g0298791 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0298791
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 18667351 .. 18667983 (-)
RNA-Seq Expression	Cmc11g0298791
Synteny	Cmc11g0298791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCGCCCAGACATTGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTAGAACCATTCATTTTACTGCTGTGTTACGTATTCTTCGCTACATTAAGGGAACCTTGGGACATGGACTTCAGTTTTCCTCTCAATCATCTCTCATATTATCTGGCTACCCTGATGTAGATAGGGCTGGGGATCCCACTGATCGGCACTCTACAACAGGTTACTGTTTTTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGCACTGAATCGAAATACCGTGCCCTTGCTGATGCTACTACTGAACTTCTATGGCTTCGCTGGCTTCTTGCTGACATGGGTGTTCCCCAACAGGGACTCACTCTCCTCCATTGTTATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTTCATGAAAGTACAAAGCACATCGAAAATGACTATCACTTCATTCGTCATCATCTCTTGAGCAATACTCTTCTCTTACAACCTCTCTCCACCACTGAGCAACCAGCAAATATCTTCACCAAAGCTTTACCATCTACCCGCTTCAATCAATTGCTTACCAAACTCAAGCTGATAGATACTCTACCACCTTGA

mRNA sequence

ATGAGTCGCCCAGACATTGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTAGAACCATTCATTTTACTGCTGTGTTACGTATTCTTCGCTACATTAAGGGAACCTTGGGACATGGACTTCAGTTTTCCTCTCAATCATCTCTCATATTATCTGGCTACCCTGATGTAGATAGGGCTGGGGATCCCACTGATCGGCACTCTACAACAGGTTACTGTTTTTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGCACTGAATCGAAATACCGTGCCCTTGCTGATGCTACTACTGAACTTCTATGGCTTCGCTGGCTTCTTGCTGACATGGGTGTTCCCCAACAGGGACTCACTCTCCTCCATTGTTATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTTCATGAAAGTACAAAGCACATCGAAAATGACTATCACTTCATTCGTCATCATCTCTTGAGCAATACTCTTCTCTTACAACCTCTCTCCACCACTGAGCAACCAGCAAATATCTTCACCAAAGCTTTACCATCTACCCGCTTCAATCAATTGCTTACCAAACTCAAGCTGATAGATACTCTACCACCTTGA

Coding sequence (CDS)

ATGAGTCGCCCAGACATTGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTAGAACCATTCATTTTACTGCTGTGTTACGTATTCTTCGCTACATTAAGGGAACCTTGGGACATGGACTTCAGTTTTCCTCTCAATCATCTCTCATATTATCTGGCTACCCTGATGTAGATAGGGCTGGGGATCCCACTGATCGGCACTCTACAACAGGTTACTGTTTTTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGCACTGAATCGAAATACCGTGCCCTTGCTGATGCTACTACTGAACTTCTATGGCTTCGCTGGCTTCTTGCTGACATGGGTGTTCCCCAACAGGGACTCACTCTCCTCCATTGTTATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTTCATGAAAGTACAAAGCACATCGAAAATGACTATCACTTCATTCGTCATCATCTCTTGAGCAATACTCTTCTCTTACAACCTCTCTCCACCACTGAGCAACCAGCAAATATCTTCACCAAAGCTTTACCATCTACCCGCTTCAATCAATTGCTTACCAAACTCAAGCTGATAGATACTCTACCACCTTGA

Protein sequence

MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVDRAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLADMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTEQPANIFTKALPSTRFNQLLTKLKLIDTLPP

Homology

[Close]

BLAST of Cmc11g0298791 vs. NCBI nr
Match: KAA0062044.1 (seryl-tRNA synthetase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 422.2 bits (1084), Expect = 2.7e-114
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1    MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
            MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD
Sbjct: 863  MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 922

Query: 61   RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
            RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA
Sbjct: 923  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 982

Query: 121  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
            DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE
Sbjct: 983  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 1042

Query: 181  QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
            QPANIFTKALPSTRFNQLLTKLKLIDTLPP
Sbjct: 1043 QPANIFTKALPSTRFNQLLTKLKLIDTLPP 1072

[Close]

BLAST of Cmc11g0298791 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 188/210 (89.52%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1    MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
            ++RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+KGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 1125 VTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDAD 1184

Query: 61   RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
             AGDPTDR STTGYCFYLGDSLISWRSKKQSVVSRSSTES+YRALADAT ELLWLRWLLA
Sbjct: 1185 WAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLA 1244

Query: 121  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
            DMGVPQQG TLLHC NRSAIQIAHNDVFHE TKHIEND HFIRHHLLS+TLLLQ +STTE
Sbjct: 1245 DMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTE 1304

Query: 181  QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
            QPA+IFTKALPSTRFNQ+ TKLKL  TLPP
Sbjct: 1305 QPADIFTKALPSTRFNQIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc11g0298791 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 188/210 (89.52%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1    MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
            ++RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+KGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 1125 VTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDAD 1184

Query: 61   RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
             AGDPTDR STTGYCFYLGDSLISWRSKKQSVVSRSSTES+YRALADAT ELLWLRWLLA
Sbjct: 1185 WAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLA 1244

Query: 121  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
            DMGVPQQG TLLHC NRSAIQIAHNDVFHE TKHIEND HFIRHHLLS+TLLLQ +STTE
Sbjct: 1245 DMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTE 1304

Query: 181  QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
            QPA+IFTKALPSTRFNQ+ TKLKL  TLPP
Sbjct: 1305 QPADIFTKALPSTRFNQIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc11g0298791 vs. NCBI nr
Match: KAA0057482.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 375.6 bits (963), Expect = 2.9e-100
Identity = 188/210 (89.52%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
           ++RPDIAY VHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 566 VTRPDIAYVVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDAD 625

Query: 61  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
             GDPTDR STTGYCFYLGDSLISWRSKKQSVVSRSSTES+YRALAD T ELLWLRWLLA
Sbjct: 626 WVGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLA 685

Query: 121 DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
           DMGVPQQG TLL+C NRSAIQIAHNDVFHE TKHIEND HFIRHHLLSNTLLLQP+STTE
Sbjct: 686 DMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTE 745

Query: 181 QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
           QPA+IFTKALPSTRFNQL TKLKL  TLPP
Sbjct: 746 QPADIFTKALPSTRFNQLRTKLKLTATLPP 775

[Close]

BLAST of Cmc11g0298791 vs. NCBI nr
Match: KAA0050073.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 375.2 bits (962), Expect = 3.8e-100
Identity = 186/210 (88.57%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
           ++RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+KGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 384 VTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDAD 443

Query: 61  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
            AGDPTDR STTGYCFYLGDSLISWR+KKQSVVSRSSTES+Y ALADAT ELLWLRWLLA
Sbjct: 444 WAGDPTDRRSTTGYCFYLGDSLISWRNKKQSVVSRSSTESEYHALADATAELLWLRWLLA 503

Query: 121 DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
           DMGVPQQG TLLHC NRSAIQIAHNDVFHE TKHIEND HFIRHHLLS+TLLLQP+STTE
Sbjct: 504 DMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQPVSTTE 563

Query: 181 QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
           QPA+IFTKALPSTRFNQ+ TKL+L  TLPP
Sbjct: 564 QPADIFTKALPSTRFNQIRTKLRLTATLPP 593

[Close]

BLAST of Cmc11g0298791 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.9e-39
Identity = 90/209 (43.06%), Postives = 125/209 (59.81%), Query Frame = 0


Query: 2    SRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVDR 61
            +RPDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  Y D D 
Sbjct: 1258 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1317

Query: 62   AGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLAD 121
            AGD  D  ST GY  YLG   ISW SKKQ  V RSSTE++YR++A+ ++E+ W+  LL +
Sbjct: 1318 AGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTE 1377

Query: 122  MGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTEQ 181
            +G+      +++C N  A  +  N VFH   KHI  DYHFIR+ + S  L +  +ST +Q
Sbjct: 1378 LGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQ 1437

Query: 182  PANIFTKALPSTRFNQLLTKLKLIDTLPP 211
             A+  TK L  T F    +K+  +  +PP
Sbjct: 1438 LADTLTKPLSRTAFQNFASKIG-VTRVPP 1465

[Close]

BLAST of Cmc11g0298791 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-38
Identity = 87/208 (41.83%), Postives = 123/208 (59.13%), Query Frame = 0


Query: 2    SRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVDR 61
            +RPD++YAV+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L L  Y D D 
Sbjct: 1241 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1300

Query: 62   AGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLAD 121
            AGD  D  ST GY  YLG   ISW SKKQ  V RSSTE++YR++A+ ++EL W+  LL +
Sbjct: 1301 AGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTE 1360

Query: 122  MGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTEQ 181
            +G+      +++C N  A  +  N VFH   KHI  DYHFIR+ + S  L +  +ST +Q
Sbjct: 1361 LGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQ 1420

Query: 182  PANIFTKALPSTRFNQLLTKLKLIDTLP 210
             A+  TK L    F     K+ +I   P
Sbjct: 1421 LADTLTKPLSRVAFQNFSRKIGVIKVPP 1448

[Close]

BLAST of Cmc11g0298791 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 81/194 (41.75%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 2    SRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVDR 61
            +RPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  IL GY D D 
Sbjct: 1125 TRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADM 1184

Query: 62   AGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLAD 121
            AGD  +R S+TGY F      ISW+SK Q  V+ S+TE++Y A  +   E++WL+  L +
Sbjct: 1185 AGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQE 1244

Query: 122  MGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTEQ 181
            +G+ Q+   +++C ++SAI ++ N ++H  TKHI+  YH+IR  +   +L +  +ST E 
Sbjct: 1245 LGLHQKEY-VVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNEN 1304

Query: 182  PANIFTKALPSTRF 196
            PA++ TK +P  +F
Sbjct: 1305 PADMLTKVVPRNKF 1316

[Close]

BLAST of Cmc11g0298791 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 81/207 (39.13%), Postives = 125/207 (60.39%), Query Frame = 0


Query: 2    SRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--ILSGYPDV 61
            +RPD+  AV+I+S++ +   +  +  + R+LRY+KGT+   L F    +    + GY D 
Sbjct: 1195 TRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDS 1254

Query: 62   DRAGDPTDRHSTTGYCFYLGD-SLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWL 121
            D AG   DR STTGY F + D +LI W +K+Q+ V+ SSTE++Y AL +A  E LWL++L
Sbjct: 1255 DWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFL 1314

Query: 122  LADMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLST 181
            L  + +  +    ++  N+  I IA+N   H+  KHI+  YHF R  + +N + L+ + T
Sbjct: 1315 LTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPT 1374

Query: 182  TEQPANIFTKALPSTRFNQLLTKLKLI 206
              Q A+IFTK LP+ RF +L  KL L+
Sbjct: 1375 ENQLADIFTKPLPAARFVELRDKLGLL 1401

[Close]

BLAST of Cmc11g0298791 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-24
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 1   MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
           ++RPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D D
Sbjct: 112 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171

Query: 61  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLW 115
            AG  + R STTG+C +LG ++ISW +K+Q  VSRSSTE++YRALA    EL W
Sbjct: 172 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc11g0298791 vs. ExPASy TrEMBL
Match: A0A5A7V413 (Seryl-tRNA synthetase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003840 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1    MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
            MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD
Sbjct: 863  MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 922

Query: 61   RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
            RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA
Sbjct: 923  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 982

Query: 121  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
            DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE
Sbjct: 983  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 1042

Query: 181  QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
            QPANIFTKALPSTRFNQLLTKLKLIDTLPP
Sbjct: 1043 QPANIFTKALPSTRFNQLLTKLKLIDTLPP 1072

[Close]

BLAST of Cmc11g0298791 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.3e-101
Identity = 188/210 (89.52%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1    MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
            ++RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+KGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 1125 VTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDAD 1184

Query: 61   RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
             AGDPTDR STTGYCFYLGDSLISWRSKKQSVVSRSSTES+YRALADAT ELLWLRWLLA
Sbjct: 1185 WAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLA 1244

Query: 121  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
            DMGVPQQG TLLHC NRSAIQIAHNDVFHE TKHIEND HFIRHHLLS+TLLLQ +STTE
Sbjct: 1245 DMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTE 1304

Query: 181  QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
            QPA+IFTKALPSTRFNQ+ TKLKL  TLPP
Sbjct: 1305 QPADIFTKALPSTRFNQIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc11g0298791 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.3e-101
Identity = 188/210 (89.52%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1    MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
            ++RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+KGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 1125 VTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDAD 1184

Query: 61   RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
             AGDPTDR STTGYCFYLGDSLISWRSKKQSVVSRSSTES+YRALADAT ELLWLRWLLA
Sbjct: 1185 WAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLA 1244

Query: 121  DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
            DMGVPQQG TLLHC NRSAIQIAHNDVFHE TKHIEND HFIRHHLLS+TLLLQ +STTE
Sbjct: 1245 DMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTE 1304

Query: 181  QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
            QPA+IFTKALPSTRFNQ+ TKLKL  TLPP
Sbjct: 1305 QPADIFTKALPSTRFNQIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc11g0298791 vs. ExPASy TrEMBL
Match: A0A5A7UNP5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003640 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 188/210 (89.52%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
           ++RPDIAY VHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 566 VTRPDIAYVVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDAD 625

Query: 61  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
             GDPTDR STTGYCFYLGDSLISWRSKKQSVVSRSSTES+YRALAD T ELLWLRWLLA
Sbjct: 626 WVGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLA 685

Query: 121 DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
           DMGVPQQG TLL+C NRSAIQIAHNDVFHE TKHIEND HFIRHHLLSNTLLLQP+STTE
Sbjct: 686 DMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTE 745

Query: 181 QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
           QPA+IFTKALPSTRFNQL TKLKL  TLPP
Sbjct: 746 QPADIFTKALPSTRFNQLRTKLKLTATLPP 775

[Close]

BLAST of Cmc11g0298791 vs. ExPASy TrEMBL
Match: A0A5A7U2E5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00550 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.8e-100
Identity = 186/210 (88.57%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
           ++RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+KGTLGHGLQFSSQSSL+LSGY D D
Sbjct: 384 VTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDAD 443

Query: 61  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
            AGDPTDR STTGYCFYLGDSLISWR+KKQSVVSRSSTES+Y ALADAT ELLWLRWLLA
Sbjct: 444 WAGDPTDRRSTTGYCFYLGDSLISWRNKKQSVVSRSSTESEYHALADATAELLWLRWLLA 503

Query: 121 DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIRHHLLSNTLLLQPLSTTE 180
           DMGVPQQG TLLHC NRSAIQIAHNDVFHE TKHIEND HFIRHHLLS+TLLLQP+STTE
Sbjct: 504 DMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQPVSTTE 563

Query: 181 QPANIFTKALPSTRFNQLLTKLKLIDTLPP 211
           QPA+IFTKALPSTRFNQ+ TKL+L  TLPP
Sbjct: 564 QPADIFTKALPSTRFNQIRTKLRLTATLPP 593

[Close]

BLAST of Cmc11g0298791 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-40
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 1   MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
           ++R DI++AV+ +SQF  APR  H  AV++IL YIKGT+G GL +SSQ+ + L  + D  
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449

Query: 61  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLWLRWLLA 120
                  R ST GYC +LG SLISW+SKKQ VVS+SS E++YRAL+ AT E++WL     
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509

Query: 121 DMGVPQQGLTLLHCYNRSAIQIAHNDVFHESTKHIENDYHFIR 164
           ++ +P    TLL C N +AI IA N VFHE TKHIE+D H +R
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552

[Close]

BLAST of Cmc11g0298791 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 1   MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
           ++RPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D D
Sbjct: 112 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171

Query: 61  RAGDPTDRHSTTGYCFYLGDSLISWRSKKQSVVSRSSTESKYRALADATTELLW 115
            AG  + R STTG+C +LG ++ISW +K+Q  VSRSSTE++YRALA    EL W
Sbjct: 172 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc11g0298791 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-13
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 1  MSRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLILSGYPDVD 60
          ++RPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  + D D
Sbjct: 5  ITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSD 64

Query: 61 RAGDPTDRHSTTGYC 76
           A  P  R S TG+C
Sbjct: 65 WASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc11g0298791 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062044.1	2.7e-114	100.00	seryl-tRNA synthetase isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0037745.1	1.3e-100	89.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	1.3e-100	89.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0057482.1	2.9e-100	89.52	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0050073.1	3.8e-100	88.57	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0298791 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.9e-39	43.06	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.9e-38	41.83	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	2.0e-35	41.75	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.2e-32	39.13	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	1.6e-24	50.00	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc11g0298791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V413	1.3e-114	100.00	Seryl-tRNA synthetase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5A7VIT8	6.3e-101	89.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	6.3e-101	89.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UNP5	1.4e-100	89.52	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7U2E5	1.8e-100	88.57	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Cmc11g0298791 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.1e-40	51.53	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.1e-25	50.00	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	3.7e-13	45.33	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 3..79
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 3..79
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 55..192 e-value: 1.07412E-73 score: 217.336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0298791.1	Cmc11g0298791.1	mRNA