Cmc11g0292431 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0292431
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionFlocculation protein FLO11-like
LocationCMiso1.1chr11: 8092023 .. 8094322 (-)
RNA-Seq ExpressionCmc11g0292431
SyntenyCmc11g0292431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGAAGGAAGTTGTTTGAATTTCAACGGGCAACATTCATTTCAGGTGCTTTTATCTCCCTCGCACGATTCGACTTCAGCCTTCACGTTGCTTCTTGTATTTGTGGTCTATAACTCTTCTTTGGTCATCAATGGTGTTAACAAGGAAGAATCAGTATCGATTAGCTGTACCCACCGTGAATCTGTCAACTAGTTCTGCAACCTTCATTGAAACCTCCGAGAATCAAGATGATCATAGCAAGAAACCCATTCCGACGGTTGCGATATCTTCAAGAAATCCCTAAGTCGTCCTCATCTGAATCTTCAAAATCTATCCAAGGAGCCAATGCTGGTGCACCAGGTACGAACGCTTCTCCCTCTCAGTTTCATATCATTCCTGCTACTAGGTGTGGTGGAGATTCTCAATGTTTTACTCTCCTTGACGCCAAACGGAAGTTTAGGGCTCAAATCTCTAAGTCCATTGAGACTGTTAATGTTGACTACGATTCCTCTGAGGATGATAATGTTGAACTGGCTGATGTGTTGCAACGTAAGTTCGACACTACGACTACCACTGTGTCTAAACCGAGCATGGGCGAATCGTCCAAGAAACCTAGATTGACTAAGATGTATACTGTAAAGGAGCTCTACCATTAATTGTTTGATTATGATCATGACATGTATGTCTCTAAAAGTTCTTCTGGTGCAAGTCACTCTGCTTCTCTCTGAATGGGTGTTGGTCATACCAGTCCAAAGCAAACTGTGAATTTGGTCATAAATGATTTATTGAAGGACTTTGAGGGACCCTCAGAAGCTATGTGAAGCACACCTCATAATGTACCGGTTTCTGAATCTTTTCCGGAGTGTAATGTTGAGTTGACATCTGAAGTATTGTCTTCACAGCCTCCTGTGTCGACTATCCATACTGAAGCTGGTGAGACTTCTGCAGATTTGCTTCCTTGTAGTCATCATCTCCATCGAAAAAAGTGGTTGATGATAGTGCTGCTCTTGCCAAGAAGCAGGCTAAGTCGTGTTATCGCCCTTCATCTAAGGGGAGAAACGTCATCACTACTAAAGTTGAGCATCGTAAGCTTCCTCCTAATCACTATTGATGGGATATCATTCCATTTTAAAGAGTGTTTCTTCAAATGGAAATATGTTGTTCATTGTTGTCTAGTTGATGAATCTGTGATTTCCGACCAACATCGTCTGTGCTTCGCTGTTATTGTGTTGATTACCAAAGCTGGGCTATTGTCTACAGTGACGAACCTTGGGCTGTTTTATCCAAAGCTAGTCTAAGAATTCTTTGTCAATTTGCCAACAAACTTAAATGAACCCGGAACCTCTGATTTTTGGAAGGTACACATGCGTGGTAAGTGTTTTGATGTGTCTCCTACCTTGTTGAACTCTTTCTTGAATGTGTCTTTACCTACTGGATACGTGGCTATTCTGCCTTCTTCCGAATAGAGGAATTTTAAGAGCATGGCCCACTGACTGGCAGTTTCCCATGATCAAGCTCAGTGTGAAGTATGCTATTCTTTACAAGATTTGGATTGCAAATTGGTACGCGTATACTCATATGGGCACCATCTCGACTTCTCTTACTCAGTTGATATATATGATTTGGCACTAGTGCCCCAGTTAATGCGGGTGAATTGATATTTTAACAAATTCTCATACATGTTGACACCTACGGAAGCAACATCTCGATCTACTTTCCTCGACTAGTCACTAGTTTTCTCCTCGCTTAGCACCCGAATATTATCACAAATGATGAGGTTGTCGATCTGGCTCCAAATGTATGATCTTTATGGAAGATATGATTTGTAAGATTCATTTTTTATCGTTCTTTGCGGAAGAAATATATAGGGTTTGTGAGATTCTAACGGCTTGCGAAAAAGCAGTTTGAAAGTTGAAACATAAGTTGCAACTCAATCAAGAAGTGTTGATTGCAGTAAGTTTTTCGGTGTGAATCATCTTACTGTGCGTAACATTAATTTTTAGGAAACCATATAGTACATACCATCCGTGAGAAGAACATGTATGAAGAAAGATTATATAGTGGGGATGATTGGATGATTAATGAGAAACTTGATCAAGGAAAAGATCTTCATCGTTGAAACTATTAATCAGATAAACAAGAACACTAATTAAGGGGAAGATTTTAATAGACTAATTAAATATTAGATTTAGTTGTGATATGTCTTTACATTCCATGACAATTACCACTACTGTATAGAGTGAGAGTGACATTGTAAACTCTACCGATTATCATAAGATTGTACTTATGATCAATTATTAAATTAATAAAATCCCCAATCT

mRNA sequence

TCAGAAGGAAGTTGTTTGAATTTCAACGGGCAACATTCATTTCAGGTGCTTTTATCTCCCTCGCACGATTCGACTTCAGCCTTCACGTTGCTTCTTGTATTTGTGGTCTATAACTCTTCTTTGGTCATCAATGGTGTTAACAAGGAAGAATCAGTATCGATTAGCTGTACCCACCGTGAATCTGTCAACTAGTTCTGCAACCTTCATTGAAACCTCCGAGAATCAAGATGATCATAGCAAGAAACCCATTCCGACGGTTGCGATATCTTCAAGAAATCCCTAAGTCGTCCTCATCTGAATCTTCAAAATCTATCCAAGGAGCCAATGCTGGTGCACCAGTTTAGGGCTCAAATCTCTAAGTCCATTGAGACTGTTAATGTTGACTACGATTCCTCTGAGGATGATAATGTTGAACTGGCTGATGTGTTGCAACGTAAGTTCGACACTACGACTACCACTGTGTCTAAACCGAGCATGGGCGAATCGTCCAAGAAACCTAGATTGACTAAGATGTATACTGTAAAGGAGCTCTACCATTAATTGTTTGATTATGATCATGACATGTATGTCTCTAAAAGTTCTTCTGGTGCAAGTCACTCTGCTTCTCTCTGAATGGGTGTTGGTCATACCAGTCCAAAGCAAACTGTGAATTTGGTCATAAATGATTTATTGAAGGACTTTGAGGGACCCTCAGAAGCTATGTGAAGCACACCTCATAATGTACCGGTTTCTGAATCTTTTCCGGAGTGTAATGTTGAGTTGACATCTGAAGTATTGTCTTCACAGCCTCCTGTGTCGACTATCCATACTGAAGCTGGTGAGACTTCTGCAGATTTGCTTCCTTGTAGTCATCATCTCCATCGAAAAAAGTGGTTGATGATAGTGCTGCTCTTGCCAAGAAGCAGGCTAAGTCGTGTTATCGCCCTTCATCTAAGGGGAGAAACGTCATCACTACTAAAGTTGAGCATCGTAAGCTTCCTCCTAATCACTATTGATGGGATATCATTCCATTTTAAAGAGTGTTTCTTCAAATGGAAATATGTTGTTCATTGTTGTCTAGTTGATGAATCTGTGATTTCCGACCAACATCGTCTGTGCTTCGCTGTTATTGTGTTGATTACCAAAGCTGGGCTATTGTCTACAGTGACGAACCTTGGGCTGTTTTATCCAAAGCTAGTCTAAGAATTCTTTGTCAATTTGCCAACAAACTTAAATGAACCCGGAACCTCTGATTTTTGGAAGGTACACATGCGTGGTAAGTGTTTTGATGTGTCTCCTACCTTGTTGAACTCTTTCTTGAATGTGTCTTTACCTACTGGATACGTGGCTATTCTGCCTTCTTCCGAATAGAGGAATTTTAAGAGCATGGCCCACTGACTGGCAGTTTCCCATGATCAAGCTCAGTGTGAAGTATGCTATTCTTTACAAGATTTGGATTGCAAATTGGTACGCGTATACTCATATGGGCACCATCTCGACTTCTCTTACTCAGTTGATATATATGATTTGGCACTAGTGCCCCAGTTAATGCGGGTGAATTGATATTTTAACAAATTCTCATACATGTTGACACCTACGGAAGCAACATCTCGATCTACTTTCCTCGACTAGTCACTAGTTTTCTCCTCGCTTAGCACCCGAATATTATCACAAATGATGAGGTTGTCGATCTGGCTCCAAATGTATGATCTTTATGGAAGATATGATTTGTAAGATTCATTTTTTATCGTTCTTTGCGGAAGAAATATATAGGGTTTGTGAGATTCTAACGGCTTGCGAAAAAGCAGTTTGAAAGTTGAAACATAAGTTGCAACTCAATCAAGAAGTGTTGATTGCAGTAAGTTTTTCGGTGTGAATCATCTTACTGTGCGTAACATTAATTTTTAGGAAACCATATAGTACATACCATCCGTGAGAAGAACATGTATGAAGAAAGATTATATAGTGGGGATGATTGGATGATTAATGAGAAACTTGATCAAGGAAAAGATCTTCATCGTTGAAACTATTAATCAGATAAACAAGAACACTAATTAAGGGGAAGATTTTAATAGACTAATTAAATATTAGATTTAGTTGTGATATGTCTTTACATTCCATGACAATTACCACTACTGTATAGAGTGAGAGTGACATTGTAAACTCTACCGATTATCATAAGATTGTACTTATGATCAATTATTAAATTAATAAAATCCCCAATCT

Coding sequence (CDS)

ATGATAGTGCTGCTCTTGCCAAGAAGCAGGCTAAGTCGTGTTATCGCCCTTCATCTAAGGGGAGAAACGTCATCACTACTAAAGTTGAGCATCGTAAGCTTCCTCCTAATCACTATTGATGGGATATCATTCCATTTTAAAGAGTGTTTCTTCAAATGGAAATATGTTGTTCATTGTTGTCTAGTTGATGAATCTGTGATTTCCGACCAACATCGTCTGTGCTTCGCTGTTATTGTGTTGATTACCAAAGCTGGGCTATTGTCTACAGTGACGAACCTTGGGCTGTTTTATCCAAAGCTAGTCTAA

Protein sequence

MIVLLLPRSRLSRVIALHLRGETSSLLKLSIVSFLLITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLFYPKLV
Homology
[Close]
BLAST of Cmc11g0292431 vs. NCBI nr
Match: KAA0062813.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYJ96740.1 cell wall protein RBR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-17
Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 37  ITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLF 96
           + IDGISFH +EC FKWKYV H  L DE+VISDQHRLC A+I LITKAGLL TVTNLG+F
Sbjct: 28  LPIDGISFHSEECVFKWKYVTHRQLADENVISDQHRLCSAIIDLITKAGLLQTVTNLGVF 87

Query: 97  YPKLV 102
           Y K V
Sbjct: 88  YSKYV 92

[Close]
BLAST of Cmc11g0292431 vs. NCBI nr
Match: TYJ96206.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-15
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 37  ITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLF 96
           ++ID ISFH +EC F+WKYVVH  L DESVI DQH  C A+I LITKAGLL TVT+LG+F
Sbjct: 109 LSIDEISFHSEECVFRWKYVVHRRLGDESVIFDQHCSCSAIIDLITKAGLLQTVTDLGVF 168

Query: 97  YPKLV 102
           YPKLV
Sbjct: 169 YPKLV 173

[Close]
BLAST of Cmc11g0292431 vs. NCBI nr
Match: KAA0063339.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK28039.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 2.7e-11
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 35  LLITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLG 94
           L I ID ISFH ++C FKWKYVV   + DESVI +Q+    AV  LI KAG++ TVTNLG
Sbjct: 100 LFIPIDDISFHSEKCVFKWKYVVRRRIADESVIFNQYYSYAAVFDLIDKAGMICTVTNLG 159

Query: 95  LFYPKLV 102
           +FYPKLV
Sbjct: 160 IFYPKLV 166

[Close]
BLAST of Cmc11g0292431 vs. NCBI nr
Match: KAA0066374.1 (uncharacterized protein E6C27_scaffold21G004450 [Cucumis melo var. makuwa] >TYK00910.1 uncharacterized protein E5676_scaffold602G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 3.5e-11
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0 

Query: 62  VDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLFYPKLV 102
           +DESVISDQHRLCFAVIVLITKAGLLSTVTNLGLFYPKLV
Sbjct: 192 LDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLFYPKLV 231

[Close]
BLAST of Cmc11g0292431 vs. NCBI nr
Match: TYK18909.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 37  ITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLF 96
           I ID ISFH +EC F WKYV+   + D+S++SDQ   C AVI LI   G++ TV N+G+F
Sbjct: 38  ICIDEISFHSEECVFHWKYVMKQRITDKSIVSDQLHSCVAVIELIANVGMMCTVNNIGIF 97

Query: 97  YPKLV 102
           YPKLV
Sbjct: 98  YPKLV 102

[Close]
BLAST of Cmc11g0292431 vs. ExPASy TrEMBL
Match: A0A5A7V452 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00320 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 37  ITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLF 96
           + IDGISFH +EC FKWKYV H  L DE+VISDQHRLC A+I LITKAGLL TVTNLG+F
Sbjct: 28  LPIDGISFHSEECVFKWKYVTHRQLADENVISDQHRLCSAIIDLITKAGLLQTVTNLGVF 87

Query: 97  YPKLV 102
           Y K V
Sbjct: 88  YSKYV 92

[Close]
BLAST of Cmc11g0292431 vs. ExPASy TrEMBL
Match: A0A5D3BBE3 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold261G00440 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 37  ITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLF 96
           ++ID ISFH +EC F+WKYVVH  L DESVI DQH  C A+I LITKAGLL TVT+LG+F
Sbjct: 109 LSIDEISFHSEECVFRWKYVVHRRLGDESVIFDQHCSCSAIIDLITKAGLLQTVTDLGVF 168

Query: 97  YPKLV 102
           YPKLV
Sbjct: 169 YPKLV 173

[Close]
BLAST of Cmc11g0292431 vs. ExPASy TrEMBL
Match: A0A5D3DX78 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002900 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-11
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 35  LLITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLG 94
           L I ID ISFH ++C FKWKYVV   + DESVI +Q+    AV  LI KAG++ TVTNLG
Sbjct: 100 LFIPIDDISFHSEKCVFKWKYVVRRRIADESVIFNQYYSYAAVFDLIDKAGMICTVTNLG 159

Query: 95  LFYPKLV 102
           +FYPKLV
Sbjct: 160 IFYPKLV 166

[Close]
BLAST of Cmc11g0292431 vs. ExPASy TrEMBL
Match: A0A5D3BPE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00750 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0 

Query: 62  VDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLFYPKLV 102
           +DESVISDQHRLCFAVIVLITKAGLLSTVTNLGLFYPKLV
Sbjct: 192 LDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLFYPKLV 231

[Close]
BLAST of Cmc11g0292431 vs. ExPASy TrEMBL
Match: A0A5D3D5S2 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001240 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.5e-11
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 37  ITIDGISFHFKECFFKWKYVVHCCLVDESVISDQHRLCFAVIVLITKAGLLSTVTNLGLF 96
           I ID ISFH +EC F WKYV+   + D+S++SDQ   C AVI LI   G++ TV N+G+F
Sbjct: 38  ICIDEISFHSEECVFHWKYVMKQRITDKSIVSDQLHSCVAVIELIANVGMMCTVNNIGIF 97

Query: 97  YPKLV 102
           YPKLV
Sbjct: 98  YPKLV 102

The following BLAST results are available for this feature:
BLAST of Cmc11g0292431 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062813.14.3e-1773.85cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYJ96740.1 cell wall pro... [more]
TYJ96206.14.0e-1570.77flocculation protein FLO11-like [Cucumis melo var. makuwa][more]
KAA0063339.12.7e-1161.19gag-pol polyprotein [Cucumis melo var. makuwa] >TYK28039.1 gag-pol polyprotein [... [more]
KAA0066374.13.5e-1197.50uncharacterized protein E6C27_scaffold21G004450 [Cucumis melo var. makuwa] >TYK0... [more]
TYK18909.11.3e-1055.38flocculation protein FLO11-like [Cucumis melo var. makuwa][more]
BLAST of Cmc11g0292431 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0292431 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V4522.1e-1773.85Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3BBE31.9e-1570.77Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DX781.3e-1161.19Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G... [more]
A0A5D3BPE61.7e-1197.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D5S26.5e-1155.38Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of Cmc11g0292431 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0292431.1Cmc11g0292431.1mRNA