Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAAGTGAAATTGCTCGTCCCATTAGTACAATTCTTGATGGTTCTAATTATATTACATGGGCCAATCAAATGAAAAGTTTCTTAATTGGACGTAAATTATGGCGTATTGTCACGGGTGATATTGCCAAACCGACCAAACAAGACAAGGAAGATGATGGAAAATTTATCGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAGATTATCACCTGGCTTAGTAACACAACAATTCCTGCTATCCATACACAATTTGATGCTTTTGAAAGTGCTAAAGAGTTATGGGATTTTCTTTTTACACGATTTAAGTCCGTCGGATTAGCGCATTACTATCAGTTGCACAATAATCTTGTTAATCTTAATCAAGAAGCTGGACAATCCGTCAATGAGTATCTAGCCGTGCTTCAACCTATCTGGACTCAACTTGATCAAGCTAACATCAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTTCGTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTGCACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCTAAACATTCGGATGTTGTTCTTGCCAGCACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCACTGGTCATAAATTTATTGATTGTCCTAAAATAGAATGCAGGTACTGCCATAAACCAGGTCATATTCTGGATAATTGTCCCATAAAACCACCTCGACCTCGAAGTTATTCTACAAGAGCAAAGAACTTCACTAAACCCAGGAACTCTTCTGTTGTTGCTGCTACTTTAGACAATCCTACCACACCCTAG
mRNA sequence
ATGGAGAAAAGTGAAATTGCTCGTCCCATTAGTACAATTCTTGATGGTTCTAATTATATTACATGGGCCAATCAAATGAAAAGTTTCTTAATTGGACGTAAATTATGGCGTATTGTCACGGGTGATATTGCCAAACCGACCAAACAAGACAAGGAAGATGATGGAAAATTTATCGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAGATTATCACCTGGCTTAGTAACACAACAATTCCTGCTATCCATACACAATTTGATGCTTTTGAAAGTGCTAAAGAGTTATGGGATTTTCTTTTTACACGATTTAAGTCCGTCGGATTAGCGCATTACTATCAGTTGCACAATAATCTTGTTAATCTTAATCAAGAAGCTGGACAATCCGTCAATGAGTATCTAGCCGTGCTTCAACCTATCTGGACTCAACTTGATCAAGCTAACATCAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTTCGTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTGCACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCTAAACATTCGGATGTTGTTCTTGCCAGCACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCACTGGTCATAAATTTATTGATTGTCCTAAAATAGAATGCAGGTACTGCCATAAACCAGGTCATATTCTGGATAATTGTCCCATAAAACCACCTCGACCTCGAAGTTATTCTACAAGAGCAAAGAACTTCACTAAACCCAGGAACTCTTCTGTTGTTGCTGCTACTTTAGACAATCCTACCACACCCTAG
Coding sequence (CDS)
ATGGAGAAAAGTGAAATTGCTCGTCCCATTAGTACAATTCTTGATGGTTCTAATTATATTACATGGGCCAATCAAATGAAAAGTTTCTTAATTGGACGTAAATTATGGCGTATTGTCACGGGTGATATTGCCAAACCGACCAAACAAGACAAGGAAGATGATGGAAAATTTATCGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAGATTATCACCTGGCTTAGTAACACAACAATTCCTGCTATCCATACACAATTTGATGCTTTTGAAAGTGCTAAAGAGTTATGGGATTTTCTTTTTACACGATTTAAGTCCGTCGGATTAGCGCATTACTATCAGTTGCACAATAATCTTGTTAATCTTAATCAAGAAGCTGGACAATCCGTCAATGAGTATCTAGCCGTGCTTCAACCTATCTGGACTCAACTTGATCAAGCTAACATCAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTTCGTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTGCACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCTAAACATTCGGATGTTGTTCTTGCCAGCACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCACTGGTCATAAATTTATTGATTGTCCTAAAATAGAATGCAGGTACTGCCATAAACCAGGTCATATTCTGGATAATTGTCCCATAAAACCACCTCGACCTCGAAGTTATTCTACAAGAGCAAAGAACTTCACTAAACCCAGGAACTCTTCTGTTGTTGCTGCTACTTTAGACAATCCTACCACACCCTAG
Protein sequence
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIERLEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLVNLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIECRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP
Homology
BLAST of Cmc10g0283391 vs. NCBI nr
Match:
KAA0064060.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 581.6 bits (1498), Expect = 3.7e-162
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER
Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFESAKELWDFL TRFKSVGLAHYYQLHNNLV
Sbjct: 61 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFESAKELWDFLSTRFKSVGLAHYYQLHNNLV 120
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYL VLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLVVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEEKRLGINLS +SDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE
Sbjct: 181 PSLDAAIQEILFEEKRLGINLSNYSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPP+PRSYSTRAK FTKPRNS VVAATLDNPTTP
Sbjct: 241 CRYCHKPGHILDNCPIKPPQPRSYSTRAKTFTKPRNSFVVAATLDNPTTP 290
BLAST of Cmc10g0283391 vs. NCBI nr
Match:
KAA0063009.1 (Integrase, catalytic core [Cucumis melo var. makuwa])
HSP 1 Score: 575.9 bits (1483), Expect = 2.0e-160
Identity = 281/290 (96.90%), Postives = 283/290 (97.59%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKF ER
Sbjct: 210 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 269
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+I AIHTQFDAFESA+ELWDFL TRFKSVGLAHYYQLHNNLV
Sbjct: 270 LEEWDSKNHQIITWLSNTSIHAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 329
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 330 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 389
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE
Sbjct: 390 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 449
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTK RN SVVAATLDNPTTP
Sbjct: 450 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKSRNFSVVAATLDNPTTP 499
BLAST of Cmc10g0283391 vs. NCBI nr
Match:
TYK16338.1 (uncharacterized protein E5676_scaffold21G001200 [Cucumis melo var. makuwa])
HSP 1 Score: 571.6 bits (1472), Expect = 3.8e-159
Identity = 278/290 (95.86%), Postives = 281/290 (96.90%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIV GDIAKPTKQDKEDDGKF ER
Sbjct: 209 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVKGDIAKPTKQDKEDDGKFSER 268
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFESA+ELWDFL TRFKSVGLAHYYQLHNNLV
Sbjct: 269 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 328
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLD+A ISKDHLRLIKV MGL PEYESVRAALLHRSPL
Sbjct: 329 NLNQEAGQSVNEYLAVLQPIWTQLDKAKISKDHLRLIKVFMGLPPEYESVRAALLHRSPL 388
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
SLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE
Sbjct: 389 TSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 448
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPRSYS RAKNFTKPRN SVVAATLDNPTTP
Sbjct: 449 CRYCHKPGHILDNCPIKPPRPRSYSKRAKNFTKPRNFSVVAATLDNPTTP 498
BLAST of Cmc10g0283391 vs. NCBI nr
Match:
KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 558.5 bits (1438), Expect = 3.3e-155
Identity = 269/290 (92.76%), Postives = 276/290 (95.17%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KFIER
Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFE+AKELW+FL TRFKSVGLAHYYQLHN+LV
Sbjct: 61 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGLRPEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP NSS LD T P
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVALDKSTIP 290
BLAST of Cmc10g0283391 vs. NCBI nr
Match:
TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-154
Identity = 268/290 (92.41%), Postives = 275/290 (94.83%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KFIER
Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFE+AKELW+FL TRFKSVGLAHYYQLHN+LV
Sbjct: 61 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGLRPEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP NSS D T P
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIP 290
BLAST of Cmc10g0283391 vs. ExPASy TrEMBL
Match:
A0A5A7V9Z8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold99G00670 PE=4 SV=1)
HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER
Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFESAKELWDFL TRFKSVGLAHYYQLHNNLV
Sbjct: 61 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFESAKELWDFLSTRFKSVGLAHYYQLHNNLV 120
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYL VLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLVVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEEKRLGINLS +SDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE
Sbjct: 181 PSLDAAIQEILFEEKRLGINLSNYSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPP+PRSYSTRAK FTKPRNS VVAATLDNPTTP
Sbjct: 241 CRYCHKPGHILDNCPIKPPQPRSYSTRAKTFTKPRNSFVVAATLDNPTTP 290
BLAST of Cmc10g0283391 vs. ExPASy TrEMBL
Match:
A0A5A7VBM6 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001110 PE=4 SV=1)
HSP 1 Score: 575.9 bits (1483), Expect = 9.7e-161
Identity = 281/290 (96.90%), Postives = 283/290 (97.59%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKF ER
Sbjct: 210 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 269
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+I AIHTQFDAFESA+ELWDFL TRFKSVGLAHYYQLHNNLV
Sbjct: 270 LEEWDSKNHQIITWLSNTSIHAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 329
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 330 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 389
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE
Sbjct: 390 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 449
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTK RN SVVAATLDNPTTP
Sbjct: 450 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKSRNFSVVAATLDNPTTP 499
BLAST of Cmc10g0283391 vs. ExPASy TrEMBL
Match:
A0A5D3CYJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001200 PE=4 SV=1)
HSP 1 Score: 571.6 bits (1472), Expect = 1.8e-159
Identity = 278/290 (95.86%), Postives = 281/290 (96.90%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIV GDIAKPTKQDKEDDGKF ER
Sbjct: 209 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVKGDIAKPTKQDKEDDGKFSER 268
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFESA+ELWDFL TRFKSVGLAHYYQLHNNLV
Sbjct: 269 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 328
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLD+A ISKDHLRLIKV MGL PEYESVRAALLHRSPL
Sbjct: 329 NLNQEAGQSVNEYLAVLQPIWTQLDKAKISKDHLRLIKVFMGLPPEYESVRAALLHRSPL 388
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
SLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE
Sbjct: 389 TSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 448
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPRSYS RAKNFTKPRN SVVAATLDNPTTP
Sbjct: 449 CRYCHKPGHILDNCPIKPPRPRSYSKRAKNFTKPRNFSVVAATLDNPTTP 498
BLAST of Cmc10g0283391 vs. ExPASy TrEMBL
Match:
A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)
HSP 1 Score: 558.5 bits (1438), Expect = 1.6e-155
Identity = 269/290 (92.76%), Postives = 276/290 (95.17%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KFIER
Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFE+AKELW+FL TRFKSVGLAHYYQLHN+LV
Sbjct: 61 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGLRPEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP NSS LD T P
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVALDKSTIP 290
BLAST of Cmc10g0283391 vs. ExPASy TrEMBL
Match:
A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)
HSP 1 Score: 555.8 bits (1431), Expect = 1.0e-154
Identity = 268/290 (92.41%), Postives = 275/290 (94.83%), Query Frame = 0
Query: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFIER 60
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KFIER
Sbjct: 1 MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60
Query: 61 LEEWDSKNHQIITWLSNTTIPAIHTQFDAFESAKELWDFLFTRFKSVGLAHYYQLHNNLV 120
LEEWDSKNHQIITWLSNT+IPAIHTQFDAFE+AKELW+FL TRFKSVGLAHYYQLHN+LV
Sbjct: 61 LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120
Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGLRPEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180
Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240
Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNSSVVAATLDNPTTP 291
CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP NSS D T P
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIP 290
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0064060.1 | 3.7e-162 | 97.24 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0063009.1 | 2.0e-160 | 96.90 | Integrase, catalytic core [Cucumis melo var. makuwa] | [more] |
TYK16338.1 | 3.8e-159 | 95.86 | uncharacterized protein E5676_scaffold21G001200 [Cucumis melo var. makuwa] | [more] |
KAA0037745.1 | 3.3e-155 | 92.76 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK19656.1 | 2.2e-154 | 92.41 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V9Z8 | 1.8e-162 | 97.24 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7VBM6 | 9.7e-161 | 96.90 | Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... | [more] |
A0A5D3CYJ2 | 1.8e-159 | 95.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T8F2 | 1.6e-155 | 92.76 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7VIT8 | 1.0e-154 | 92.41 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |