Homology
BLAST of Cmc10g0280961 vs. NCBI nr
Match:
TYK29027.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 597.8 bits (1540), Expect = 5.3e-167
Identity = 292/311 (93.89%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMFVELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 232 MCGSKSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 291
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 292 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 351
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 352 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 411
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 412 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 471
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 472 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 531
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 532 MLKCKKMPKEF 542
BLAST of Cmc10g0280961 vs. NCBI nr
Match:
TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 597.4 bits (1539), Expect = 6.9e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. NCBI nr
Match:
KAA0047979.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 597.4 bits (1539), Expect = 6.9e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. NCBI nr
Match:
TYJ96309.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 597.4 bits (1539), Expect = 6.9e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. NCBI nr
Match:
TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 597.4 bits (1539), Expect = 6.9e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 7.4e-47
Identity = 109/296 (36.82%), Postives = 170/296 (57.43%), Query Frame = 0
Query: 17 GVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMK 76
G + G+ + + G G I I + +V +VP+++ N++S L GY
Sbjct: 320 GTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFA 379
Query: 77 DYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDPNWIWHLRFGHLNFAGL 136
+ + +IAK + + ++ N + + + + +WH R GH++ GL
Sbjct: 380 NQKWRLTKG-SLVIAK-GVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGL 439
Query: 137 RLLARKNMVKGLPYVKHPN-QLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGSIK 196
++LA+K+++ Y K + C+ CL GKQ R SF Q SS R L+LV++D+CG ++
Sbjct: 440 QILAKKSLIS---YAKGTTVKPCDYCLFGKQHRVSF-QTSSERKLNILDLVYSDVCGPME 499
Query: 197 PSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALKSERGG 256
S G N YF+ FIDD +RK WVY +K K +VF +F++F ALVE+E+G +K L+S+ GG
Sbjct: 500 IESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGG 559
Query: 257 EFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARSMLKCKKMPKEF 312
E+TS EF+ +C+ +GI TVP TPQ NG+ ER RTI+ RSML+ K+PK F
Sbjct: 560 EYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSF 609
BLAST of Cmc10g0280961 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 161.0 bits (406), Expect = 2.2e-38
Identity = 96/280 (34.29%), Postives = 150/280 (53.57%), Query Frame = 0
Query: 36 LINLKNEKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQM 95
++ L+N+ + +V + N++S+ +L E G +I + I N ++ M
Sbjct: 334 IVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGM 393
Query: 96 TKNRMFLLNIQTDVAKCLKSCLKDPNWIWHLRFGHLNFAGLRLLARKNMVKG---LPYVK 155
N + ++N Q A + + K+ +WH RFGH++ L + RKNM L ++
Sbjct: 394 L-NNVPVINFQ---AYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLE 453
Query: 156 HPNQLCEGCLHGKQSRKSFPQ-ESSSRARRPLELVHTDLCGSIKPSSFGNNNYFLLFIDD 215
++CE CL+GKQ+R F Q + + +RPL +VH+D+CG I P + + NYF++F+D
Sbjct: 454 LSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQ 513
Query: 216 FNRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALKSERGGEFTSNEFKTFCAENGI 275
F Y +K KS+VF MF+ F A E + L + G E+ SNE + FC + GI
Sbjct: 514 FTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGI 573
Query: 276 CRPLTVPFTPQQNGIVERKKRTILNMARSMLKCKKMPKEF 312
LTVP TPQ NG+ ER RTI AR+M+ K+ K F
Sbjct: 574 SYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF 609
BLAST of Cmc10g0280961 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 4.7e-25
Identity = 84/301 (27.91%), Postives = 147/301 (48.84%), Query Frame = 0
Query: 16 GGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNILSLGQLLEKG-YNIL 75
G ++ D + IP+ G + + + ++ V YVPN+ N++S+ +L ++
Sbjct: 336 GDDVMIADGSTIPITHTGSASLPTSSRSLD-LNKVLYVPNIHKNLISVYRLCNTNRVSVE 395
Query: 76 MKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAKCLKSCLKDPNWIWHLRFGHLN 135
S ++D + + TK+ ++ I + V+ C K + WH R GH +
Sbjct: 396 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 455
Query: 136 FAGLRLLARKNMVKGLPYVKHPNQL--CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL 195
A L + + LP + ++L C C K + F S+ + +PLE +++D+
Sbjct: 456 LAILNSVISNH---SLPVLNPSHKLLSCSDCFINKSHKVPF-SNSTITSSKPLEYIYSDV 515
Query: 196 CGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALK 255
S S N Y+++F+D F R TW+Y +K+KS+V F FK+LVE I L
Sbjct: 516 WSS-PILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLY 575
Query: 256 SERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARSMLKCKKMPKE 312
S+ GGEF + + +++GI + P TP+ NG+ ERK R I+ M ++L +PK
Sbjct: 576 SDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKT 628
BLAST of Cmc10g0280961 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23
Identity = 83/299 (27.76%), Postives = 143/299 (47.83%), Query Frame = 0
Query: 16 GGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNILSLGQLLE-KGYNIL 75
G ++ D + IP+ G ++ K+ + N+ YVPN+ N++S+ +L G ++
Sbjct: 357 GDDVMVADGSTIPISHTGSTSLSTKSRPLN-LHNILYVPNIHKNLISVYRLCNANGVSVE 416
Query: 76 MKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAKCLKSCLKDPNWIWHLRFGHLN 135
S ++D + + TK+ ++ I + V+ K + WH R GH
Sbjct: 417 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPA 476
Query: 136 FAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCG 195
+ L + N + H C CL K ++ F Q S+ + RPLE +++D+
Sbjct: 477 PSILNSVI-SNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQ-STINSTRPLEYIYSDVWS 536
Query: 196 SIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALKSE 255
S S N Y+++F+D F R TW+Y +K+KS+V F FK L+E I S+
Sbjct: 537 S-PILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSD 596
Query: 256 RGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARSMLKCKKMPKEF 312
GGEF + + +++GI + P TP+ NG+ ERK R I+ ++L +PK +
Sbjct: 597 NGGEFVA--LWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTY 649
BLAST of Cmc10g0280961 vs. ExPASy Swiss-Prot
Match:
Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 1.6e-17
Identity = 73/310 (23.55%), Postives = 130/310 (41.94%), Query Frame = 0
Query: 19 IVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDY 78
IV IP+ G + N +N I + PN+ ++LSL +L +
Sbjct: 482 IVDAQKQDIPINAIGNLHFNFQNGTKTSI-KALHTPNIAYDLLSLSELANQNITACFTRN 541
Query: 79 SL----------LIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDPNWIWHLRF 138
+L +++ ++K + + + L I +V K KS K P + H
Sbjct: 542 TLERSDGTVLAPIVKHGDFYWLSKKYLIPSHISKLTI-NNVNKS-KSVNKYPYPLIHRML 601
Query: 139 GHLNFAGLRLLARKNMV-----KGLPYVKHPNQLCEGCLHGKQSRKSFPQESS---SRAR 198
GH NF ++ +KN V + + C CL GK ++ + S +
Sbjct: 602 GHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY 661
Query: 199 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSE--VFGMFKRFKALV 258
P + +HTD+ G + +YF+ F D+ R WVY + ++ E + +F A +
Sbjct: 662 EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFI 721
Query: 259 EKESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMA 309
+ + + ++ +RG E+T+ F GI T + +G+ ER RT+LN
Sbjct: 722 KNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDC 781
BLAST of Cmc10g0280961 vs. ExPASy TrEMBL
Match:
A0A5D3DYS0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001400 PE=4 SV=1)
HSP 1 Score: 597.8 bits (1540), Expect = 2.6e-167
Identity = 292/311 (93.89%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMFVELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 232 MCGSKSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 291
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 292 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 351
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 352 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 411
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 412 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 471
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 472 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 531
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 532 MLKCKKMPKEF 542
BLAST of Cmc10g0280961 vs. ExPASy TrEMBL
Match:
A0A5A7V3X9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003030 PE=4 SV=1)
HSP 1 Score: 597.4 bits (1539), Expect = 3.3e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. ExPASy TrEMBL
Match:
A0A5A7SJX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002010 PE=4 SV=1)
HSP 1 Score: 597.4 bits (1539), Expect = 3.3e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. ExPASy TrEMBL
Match:
A0A5A7V308 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00290 PE=4 SV=1)
HSP 1 Score: 597.4 bits (1539), Expect = 3.3e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. ExPASy TrEMBL
Match:
A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)
HSP 1 Score: 597.4 bits (1539), Expect = 3.3e-167
Identity = 291/311 (93.57%), Postives = 299/311 (96.14%), Query Frame = 0
Query: 1 MCGSKSMFVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNI 60
MCGSKSMF+ELDES GG IVFGDATKIPVKGKGKILINLKN KHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAKCLKSCLKDP 120
LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNF GLRLLARKNMVKGLPYVK P+QLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RPLELVHTDLCGSIKPSSFGNNNYFLLFIDDFNRKTWVYFVKEKSEVFGMFKRFKALVEK 240
RPLELVHTDLCG IKPSSFG NNYFLLFIDDF+RKTWVYFVKEKSEVFGMFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALKSERGGEFTSNEFKTFCAENGICRPLTVPFTPQQNGIVERKKRTILNMARS 300
ESGYYIKAL+S+RGGEFTSNEFKTFC ENGI R +TVPFTPQQNG+VERK RTILNMARS
Sbjct: 572 ESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARS 631
Query: 301 MLKCKKMPKEF 312
MLKCKKMPKEF
Sbjct: 632 MLKCKKMPKEF 642
BLAST of Cmc10g0280961 vs. TAIR 10
Match:
AT3G21000.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 53.1 bits (126), Expect = 4.5e-07
Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0
Query: 8 FVELDESFGGVIVFGDATKIPVKGKGKILINLKNEKHEFISNVYYVPNMKNNILSLGQLL 67
F LD +F + D T + V+GKG + I +K K + I NV +VP + N+LS G+++
Sbjct: 297 FTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMV 356
Query: 68 EKGYNI 74
K Y+I
Sbjct: 357 SKRYSI 362
BLAST of Cmc10g0280961 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 50.8 bits (120), Expect = 2.2e-06
Identity = 25/81 (30.86%), Postives = 39/81 (48.15%), Query Frame = 0
Query: 113 LKSCLKDPNWIWHLRFGHLNFAGLRLLARKNMVKGLPYVKHPNQLCEGCLHGKQSRKSFP 172
L KD +WH R H++ G+ LL +K + + CE C++GK R +F
Sbjct: 61 LAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKV--SSLKFCEDCIYGKTHRVNF- 120
Query: 173 QESSSRARRPLELVHTDLCGS 194
+ PL+ VH+DL G+
Sbjct: 121 STGQHTTKNPLDYVHSDLWGA 138
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK29027.1 | 5.3e-167 | 93.89 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK18362.1 | 6.9e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0047979.1 | 6.9e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYJ96309.1 | 6.9e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK06895.1 | 6.9e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 7.4e-47 | 36.82 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 2.2e-38 | 34.29 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 4.7e-25 | 27.91 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 1.2e-23 | 27.76 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q12491 | 1.6e-17 | 23.55 | Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DYS0 | 2.6e-167 | 93.89 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7V3X9 | 3.3e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7SJX6 | 3.3e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7V308 | 3.3e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3D497 | 3.3e-167 | 93.57 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
AT3G21000.1 | 4.5e-07 | 37.88 | Gag-Pol-related retrotransposon family protein | [more] |
ATMG00300.1 | 2.2e-06 | 30.86 | Gag-Pol-related retrotransposon family protein | [more] |