Cmc10g0275221 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0275221
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDUF4219 domain-containing protein/UBN2 domain-containing protein
LocationCMiso1.1chr10: 9118383 .. 9119720 (-)
RNA-Seq ExpressionCmc10g0275221
SyntenyCmc10g0275221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTCTTTATCTTCTTCTCTAAGATAACCCTCTGTTGTCGCCGCTGCCTCATCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATAAATTTTTCACCAAGGATAAGAGGATTTTCCAACCTCCATTTGAGTAACCTCGGTAAGCCAATGAAATTAAATTAATATTTTATTAATTTAATTTTGATCTATTTTGGATTTCTTTAAATGTTCAATTGGCTAAACTTTTTAAGATCTAAATGTTGGTTTTTCTCCCAATCAAGGTTGAATTGGTTTCAACCCCAATTTTTAGAAAGTTAATTATTTAGGGAGAATTTTTGGATGATAGTCAATTGCTAATTTCATTAATTAAGATACTAAGTTTTCCTTTTATGATTAGGATCAAGTTAATGAGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGTAAGAGATTCTCCTACTAGACCTTCGAACTAAATTTAAGAGACCGCATGTAATTATGATTATGCATTGATGGTAGCTAAAATGCATAACTTGATGATTGATGATGATGACTGATGTTATGTTAATGACCGATAGTATGTTGTTGATGACTGTTGATGATTGTTAATGCATGATATATTAATCACATGATTAAGGACGTTAAGATTAATACTCTTGCCATGTTATGATGTTATGTTATGCTACATGCTATGGATAGGGTGTTCTGTTAACTTTGTCTATTAGAGTCCTACCTGCATGGATGTCCTTCGGGATCACCACCTATTTAGGACTGCGTAGTTCGACGGAACCGCCAGTCTAGCATGGATATTGATATGATTCGAGTGATTCGACGGGATCCTTCGCATCCCGATTGTCTTAGTGTTACCCCCGGGTTCACTACAGACCAGCATGTCCTAGGTGCTCCCCCGGGACACCGAAGACTAGATTTTCGTTCCTACGGGACTGCATGTTACACGTGTTCGGAAACGTGCCAGAGATTGGGTACCATTTTCAGGACTCTAATGGAAAGTTAACAGACACATAGCGGGACTAGTAGTAGGTCTCTTACTGAGTATATGTTTATACTCACTCTTTCTATGTTTAATATTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAATTTAGTTTTCCCTCGTTTCAAAAAGTGTCTCTTGTCATTGTTTCTCCTTAGTAATGACTTCGACTCAGTATAAGGAGTTGAGTCGTTACAAGTACAAGTAATTTTT

mRNA sequence

GGTTCTTTATCTTCTTCTCTAAGATAACCCTCTGTTGTCGCCGCTGCCTCATCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATAAATTTTTCACCAAGGATAAGAGGATTTTCCAACCTCCATTTGAGTAACCTCGGATCAAGTTAATGAGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAATTTAGTTTTCCCTCGTTTCAAAAAGTGTCTCTTGTCATTGTTTCTCCTTAGTAATGACTTCGACTCAGTATAAGGAGTTGAGTCGTTACAAGTACAAGTAATTTTT

Coding sequence (CDS)

ATGAGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA

Protein sequence

MREFLLSTREYLVWLKSPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF
Homology
[Close]
BLAST of Cmc10g0275221 vs. NCBI nr
Match: KAA0045385.1 (hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 8.1e-12
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 9  REYLVWLKSPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          R  +V +  PGEGKGRGKLASDKEGSVTCHMGTQFCFRVYV+VF
Sbjct: 14 RSLIVLVFPPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVAVF 57

[Close]
BLAST of Cmc10g0275221 vs. NCBI nr
Match: KAA0045828.1 (DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 9.0e-11
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 12  LVWLKSPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 52
           +V +  PGEGKGRGKLASDKEGSVTCHMGTQFCFRVY+S+
Sbjct: 206 IVLVLPPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYLSI 245

[Close]
BLAST of Cmc10g0275221 vs. NCBI nr
Match: TYJ99939.1 (hypothetical protein E5676_scaffold701G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 19 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF
Sbjct: 51 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 84

[Close]
BLAST of Cmc10g0275221 vs. NCBI nr
Match: KAA0063966.1 (hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0 

Query: 12 LVWLKSPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          +V +   GEGKGRGKLASD+EGSVTCHMGTQFCFRVYVSVF
Sbjct: 17 IVLVLPQGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 57

[Close]
BLAST of Cmc10g0275221 vs. NCBI nr
Match: TYJ98810.1 (hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 2.6e-10
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 19 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          GEGKGRGKLASD+EGSVTCHMGTQFCFRVYVSVF
Sbjct: 28 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 61

[Close]
BLAST of Cmc10g0275221 vs. ExPASy TrEMBL
Match: A0A5A7TVG7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold442G00010 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-12
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 9  REYLVWLKSPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          R  +V +  PGEGKGRGKLASDKEGSVTCHMGTQFCFRVYV+VF
Sbjct: 14 RSLIVLVFPPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVAVF 57

[Close]
BLAST of Cmc10g0275221 vs. ExPASy TrEMBL
Match: A0A5A7TSJ0 (DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003550 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-11
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 12  LVWLKSPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 52
           +V +  PGEGKGRGKLASDKEGSVTCHMGTQFCFRVY+S+
Sbjct: 206 IVLVLPPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYLSI 245

[Close]
BLAST of Cmc10g0275221 vs. ExPASy TrEMBL
Match: A0A5D3BLS1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00700 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-11
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 19 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF
Sbjct: 51 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 84

[Close]
BLAST of Cmc10g0275221 vs. ExPASy TrEMBL
Match: A0A5A7VC05 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001210 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.4e-11
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0 

Query: 12 LVWLKSPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          +V +   GEGKGRGKLASD+EGSVTCHMGTQFCFRVYVSVF
Sbjct: 17 IVLVLPQGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 57

[Close]
BLAST of Cmc10g0275221 vs. ExPASy TrEMBL
Match: A0A5A7VJ46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00510 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-10
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 19 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVF 53
          GEGKGRGKLASD+EGSVTCHMGTQFCFRVYVSVF
Sbjct: 61 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 94

The following BLAST results are available for this feature:
BLAST of Cmc10g0275221 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045385.18.1e-1281.82hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa][more]
KAA0045828.19.0e-1182.50DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo v... [more]
TYJ99939.11.2e-10100.00hypothetical protein E5676_scaffold701G00700 [Cucumis melo var. makuwa][more]
KAA0063966.11.5e-1082.93hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa][more]
TYJ98810.12.6e-1097.06hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa][more]
BLAST of Cmc10g0275221 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc10g0275221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TVG73.9e-1281.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TSJ04.3e-1182.50DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... [more]
A0A5D3BLS15.7e-11100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VC057.4e-1182.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VJ461.3e-1097.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc10g0275221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0275221.1Cmc10g0275221.1mRNA