Cmc10g0274551 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0274551
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr10: 8294854 .. 8295957 (-)
RNA-Seq Expression	Cmc10g0274551
Synteny	Cmc10g0274551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGGGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGCTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAAGATTGACTATCTATTTGACCAGTTACAGGGAGCCACAATGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACGGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGAGCGAGTTTTGGCTGAAGCAGGTGTCCTTTATGGGTCACGTGGTTTCTAAGGTTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCTACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTAAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCTTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAATAA

mRNA sequence

ATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGGGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGCTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAAGATTGACTATCTATTTGACCAGTTACAGGGAGCCACAATGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACGGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGAGCGAGTTTTGGCTGAAGCAGGTGTCCTTTATGGGTCACGTGGTTTCTAAGGTTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCTACAGTCAGTGAGGTTCGTAGCTTTCTGGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCTTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAATAA

Coding sequence (CDS)

ATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGGGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGCTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAAGATTGACTATCTATTTGACCAGTTACAGGGAGCCACAATGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACGGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGAGCGAGTTTTGGCTGAAGCAGGTGTCCTTTATGGGTCACGTGGTTTCTAAGGTTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCTACAGTCAGTGAGGTTCGTAGCTTTCTGGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCTTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAATAA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK

Homology

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BLAST of Cmc10g0274551 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 677.2 bits (1746), Expect = 7.8e-191
Identity = 342/367 (93.19%), Postives = 345/367 (94.01%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
           K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
              ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

[Close]

BLAST of Cmc10g0274551 vs. NCBI nr
Match: KAA0043391.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.6 bits (1742), Expect = 2.3e-190
Identity = 341/367 (92.92%), Postives = 345/367 (94.01%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 906  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 965

Query: 61   YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 966  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 1025

Query: 121  NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 1026 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1085

Query: 181  KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
            K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 1086 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYGRFVENF 1145

Query: 241  ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
               ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1146 SLIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1205

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
            GCVLMQQGKVVAYASRQLKSH+QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1206 GCVLMQQGKVVAYASRQLKSHKQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1265

[Close]

BLAST of Cmc10g0274551 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 3.8e-190
Identity = 341/367 (92.92%), Postives = 344/367 (93.73%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
            K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
               ATPLTQLTRKGA FVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

[Close]

BLAST of Cmc10g0274551 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 673.7 bits (1737), Expect = 8.6e-190
Identity = 341/367 (92.92%), Postives = 344/367 (93.73%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+ID LFDQLQGAT+FSKIDLRSG HQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
           K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
              ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

[Close]

BLAST of Cmc10g0274551 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 673.3 bits (1736), Expect = 1.1e-189
Identity = 340/367 (92.64%), Postives = 343/367 (93.46%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 614 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
           K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 794 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241 ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
              ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 914 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

[Close]

BLAST of Cmc10g0274551 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.1e-66
Identity = 132/366 (36.07%), Postives = 209/366 (57.10%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+QE+L++G IR   SP+ +P   V KK         R+ IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNA 127
           +P +D +  +L     F+ IDL  G+HQ+ + +E + KTAF ++ GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKS 187
           PA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  K 
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL--------------- 247
           EF  K+ +F+GH+V+  G+  +P K++A+  +  P+   E+R+FL               
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 -ATPLTQLTRKGALFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG 307
            A P+T   +K       K    ++F+ LK  ++  P+L +PD    FV+ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK 352
            VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L+
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLR 580

[Close]

BLAST of Cmc10g0274551 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.1e-66
Identity = 134/367 (36.51%), Postives = 216/367 (58.86%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPRVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 66
           +E++ Q+Q++L++G IR   SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN 126
           P+P +D +  +L     F+ IDL  G+HQ+ +  E V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSK 186
           APA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 SEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL-------------- 246
            EF  ++ +F+GHV++  G+  +P KIEA+  +  P+   E+++FL              
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 --ATPLTQLTRKG-ALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 306
             A P+T+  +K   +   +   + +F+ LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
           G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

[Close]

BLAST of Cmc10g0274551 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-61
Identity = 129/367 (35.15%), Postives = 209/367 (56.95%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR   +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLAT----------- 240
           K EF   QV F+G+ +S+ G +     I+ V  W +P    E+R FL +           
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 -----PLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 345
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc10g0274551 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-61
Identity = 129/367 (35.15%), Postives = 209/367 (56.95%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR   +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLAT----------- 240
           K EF   QV F+G+ +S+ G +     I+ V  W +P    E+R FL +           
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 -----PLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 345
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc10g0274551 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-61
Identity = 129/367 (35.15%), Postives = 209/367 (56.95%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR   +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLAT----------- 240
           K EF   QV F+G+ +S+ G +     I+ V  W +P    E+R FL +           
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 -----PLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 345
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc10g0274551 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 3.8e-191
Identity = 342/367 (93.19%), Postives = 345/367 (94.01%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
           K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
              ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

[Close]

BLAST of Cmc10g0274551 vs. ExPASy TrEMBL
Match: A0A5A7TP96 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00630 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.1e-190
Identity = 341/367 (92.92%), Postives = 345/367 (94.01%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 906  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 965

Query: 61   YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 966  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 1025

Query: 121  NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 1026 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1085

Query: 181  KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
            K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 1086 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYGRFVENF 1145

Query: 241  ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
               ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1146 SLIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1205

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
            GCVLMQQGKVVAYASRQLKSH+QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1206 GCVLMQQGKVVAYASRQLKSHKQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1265

[Close]

BLAST of Cmc10g0274551 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.9e-190
Identity = 341/367 (92.92%), Postives = 344/367 (93.73%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
            K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
               ATPLTQLTRKGA FVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

[Close]

BLAST of Cmc10g0274551 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 4.2e-190
Identity = 341/367 (92.92%), Postives = 344/367 (93.73%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+ID LFDQLQGAT+FSKIDLRSG HQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
           K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
              ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

[Close]

BLAST of Cmc10g0274551 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 5.4e-190
Identity = 340/367 (92.64%), Postives = 343/367 (93.46%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPRVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRP VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 614 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61  YPLPKIDYLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+ID LFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121 NAPAVFMDLMNGVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMN VFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181 KSEFWLKQVSFMGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFL------------- 240
           K EFWLKQVSF+GHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFL             
Sbjct: 794 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241 ---ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
              ATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 352
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 914 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

[Close]

BLAST of Cmc10g0274551 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-15
Identity = 48/131 (36.64%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 162 HLRMVLQTLRDNKLYAKFSKSEFWLKQVSFMG--HVVSKVGVSVDPAKIEAVTGWTRPST 221
           HL MVLQ    ++ YA   K  F   Q++++G  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFL----------------ATPLTQLTRKGALFVWSKACEDSFQNLKQKLVTAPV 275
            +E+R FL                  PLT+L +K +L  W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSL-KWTEMAALAFKALKGAVTTLPV 122

The following BLAST results are available for this feature:

BLAST of Cmc10g0274551 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	7.8e-191	93.19	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043391.1	2.3e-190	92.92	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	3.8e-190	92.92	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	8.6e-190	92.92	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	1.1e-189	92.64	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0274551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	2.1e-66	36.07	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.1e-66	36.51	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P0CT41	1.6e-61	35.15	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.6e-61	35.15	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.6e-61	35.15	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc10g0274551 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U330	3.8e-191	93.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7TP96	1.1e-190	92.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold58...	[more]
A0A5D3BPI1	1.9e-190	92.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7UP94	4.2e-190	92.92	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7T190	5.4e-190	92.64	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]

BLAST of Cmc10g0274551 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.0e-15	36.64	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 227..279 e-value: 1.1E-9 score: 40.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 1.6E-84 score: 284.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 8.4E-28 score: 97.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.847972
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 1.6E-84 score: 284.5
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..348
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..348
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 6.25057E-94 score: 275.628
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 274..351 e-value: 2.70728E-38 score: 131.076
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 243..337 e-value: 1.4E-32 score: 111.6
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0274551.1	Cmc10g0274551.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding