Cmc10g0272621 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGATTAGTTGACGAAATGTTGGCTTCTGGAATAATTCGACCTAGCACCAGCCCATATTCAAGTCCTGTGCTGTTAGTAAGGAAAAAGGATGGAAGCTGGAGGTTTTGTGTTGACTACCGAGCGCTCAATAATGTCACCATACCAGATAAATTTCCAATTCCTGTCATTGAAGAGCTGTTTGATGAGTTGAATGGTGCAAACATGTTCTCCAAGATTGATCTTAAAGCCGGCTACTACCAAATACGAATGCACCAAGAGGATGTGGAAAAGACAGCATTTCGCACTCATAAAGGCCATTATGAATTTCTGGTCATGCCCTTTGGTTTGACTAATGCACCTTCTACTTTCCAAGCTTTGATGAATGCCATTTTCAGGCCGTATATGAGGAGGTTTGTATAG ATGGAAAGATTAGTTGACGAAATGTTGGCTTCTGGAATAATTCGACCTAGCACCAGCCCATATTCAAGTCCTGTGCTGTTAGTAAGGAAAAAGGATGGAAGCTGGAGGTTTTGTGTTGACTACCGAGCGCTCAATAATGTCACCATACCAGATAAATTTCCAATTCCTGTCATTGAAGAGCTGTTTGATGAGTTGAATGGTGCAAACATGTTCTCCAAGATTGATCTTAAAGCCGGCTACTACCAAATACGAATGCACCAAGAGGATGTGGAAAAGACAGCATTTCGCACTCATAAAGGCCATTATGAATTTCTGGTCATGCCCTTTGGTTTGACTAATGCACCTTCTACTTTCCAAGCTTTGATGAATGCCATTTTCAGGCCGTATATGAGGAGGTTTGTATAG ATGGAAAGATTAGTTGACGAAATGTTGGCTTCTGGAATAATTCGACCTAGCACCAGCCCATATTCAAGTCCTGTGCTGTTAGTAAGGAAAAAGGATGGAAGCTGGAGGTTTTGTGTTGACTACCGAGCGCTCAATAATGTCACCATACCAGATAAATTTCCAATTCCTGTCATTGAAGAGCTGTTTGATGAGTTGAATGGTGCAAACATGTTCTCCAAGATTGATCTTAAAGCCGGCTACTACCAAATACGAATGCACCAAGAGGATGTGGAAAAGACAGCATTTCGCACTCATAAAGGCCATTATGAATTTCTGGTCATGCCCTTTGGTTTGACTAATGCACCTTCTACTTTCCAAGCTTTGATGAATGCCATTTTCAGGCCGTATATGAGGAGGTTTGTATAG MERLVDEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELNGANMFSKIDLKAGYYQIRMHQEDVEKTAFRTHKGHYEFLVMPFGLTNAPSTFQALMNAIFRPYMRRFV Homology
BLAST of Cmc10g0272621 vs. NCBI nr
Match: TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. NCBI nr
Match: TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. NCBI nr
Match: KAA0049776.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. NCBI nr
Match: KAA0049630.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. NCBI nr
Match: KAA0062227.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66 Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 3.4e-33 Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.0e-32 Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 138.3 bits (347), Expect = 6.5e-32 Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 138.3 bits (347), Expect = 6.5e-32 Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.5e-31 Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy TrEMBL
Match: A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy TrEMBL
Match: A0A5A7U2S1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00940 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy TrEMBL
Match: A0A5D3DI73 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00700 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy TrEMBL
Match: A0A5A7U6J3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001310 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66 Identity = 119/134 (88.81%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cmc10g0272621 vs. ExPASy TrEMBL
Match: A0A5A7T5N7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00890 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66 Identity = 119/134 (88.81%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of Cmc10g0272621 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06 Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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