Cmc10g0261371 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0261371
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Location	CMiso1.1chr10: 45197 .. 45687 (-)
RNA-Seq Expression	Cmc10g0261371
Synteny	Cmc10g0261371

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTTGGGGTTGGAATTTGTGGCGTCAACCTATAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACTGAGTATTCAGGTATAAAATTTGGTTTATTTTATGTTGCTTCCTATCTAAATCTATTAGTTTCTTCGTTATTTGTAACTGTTCTTTACTTGGGTGGTTGGGATATCTCTATTCCATACATATTAGGTTATGAACTATTTGAAATAAATAAAGTGTATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCGAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTATTAAATCTTGGATGGAAATTTCTTTTACCTATATCTCTCGGTAATCTATTATTAACAACATCTTTTCAACTCTTTTCATTGTAA

mRNA sequence

ATGGTTTTTGGGGTTGGAATTTGTGGCAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACTGAGTATTCAGGTATAAAATTTGGTTTATTTTATGTTGCTTCCTATCTAAATCTATTAGTTTCTTCGTTATTTGTAACTGTTCTTTACTTGGGTGGTTGGGATATCTCTATTCCATACATATTAGGTTATGAACTATTTGAAATAAATAAAGTGTATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCGAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTATTAAATCTTGGATGGAAATTTCTTTTACCTATATCTCTCGGTAATCTATTATTAACAACATCTTTTCAACTCTTTTCATTGTAA

Coding sequence (CDS)

ATGGTTTTTGGGGTTGGAATTTGTGGCAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACTGAGTATTCAGGTATAAAATTTGGTTTATTTTATGTTGCTTCCTATCTAAATCTATTAGTTTCTTCGTTATTTGTAACTGTTCTTTACTTGGGTGGTTGGGATATCTCTATTCCATACATATTAGGTTATGAACTATTTGAAATAAATAAAGTGTATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCGAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTATTAAATCTTGGATGGAAATTTCTTTTACCTATATCTCTCGGTAATCTATTATTAACAACATCTTTTCAACTCTTTTCATTGTAA

Protein sequence

MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQLFSL

Homology

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BLAST of Cmc10g0261371 vs. NCBI nr
Match: QHB76020.1 (NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 220 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 279

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 280 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 339

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 340 LGWKFLLPISLGNLLLTTSFQLFSL 364

[Close]

BLAST of Cmc10g0261371 vs. NCBI nr
Match: YP_009004096.1 (NADH-plastoquinone oxidoreductase subunit 1 [Cucumis hystrix] >Q2QD36.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 1; Short=NDH subunit 1; AltName: Full=NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus] >ALF03356.1 NADH dehydrogenase subunit 1 [Cucumis sativus var. hardwickii] >AVE15387.1 NdhA [Cucumis sativus var. sativus] >AAZ94703.1 NADH dehydrogenase subunit 1 [Cucumis sativus] >ABI97468.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus] >ABI98799.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 279 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLFSL 363

[Close]

BLAST of Cmc10g0261371 vs. NCBI nr
Match: YP_247655.1 (NADH dehydrogenase subunit 1 [Cucumis sativus] >CAJ00814.1 NADH dehydrogenase subunit 1 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 215 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 274

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 275 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 334

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 335 LGWKFLLPISLGNLLLTTSFQLFSL 359

[Close]

BLAST of Cmc10g0261371 vs. NCBI nr
Match: ASY96384.1 (NADH dehydrogenase subunit 1 [Cucumis melo subsp. agrestis] >ASY96644.1 NADH dehydrogenase subunit 1 [Cucumis melo var. conomon] >ASY96732.1 NADH dehydrogenase subunit 1 [Cucumis melo var. makuwa] >ASY96819.1 NADH dehydrogenase subunit 1 [Cucumis melo var. momordica] >ASY96906.1 NADH dehydrogenase subunit 1 [Cucumis melo var. dudaim] >ASY96993.1 NADH dehydrogenase subunit 1 [Cucumis melo var. cantalupo] >ASY97167.1 NADH dehydrogenase subunit 1 [Cucumis melo var. inodorus] >ASY97341.1 NADH dehydrogenase subunit 1 [Cucumis melo var. flexuosus] >QRW36611.1 NADH dehydrogenase subunit 1 [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 220 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 279

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 280 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 339

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 340 LGWKFLLPISLGNLLLTTSFQLFSL 364

[Close]

BLAST of Cmc10g0261371 vs. NCBI nr
Match: QCY72897.1 (NdhA [Cucumis hystrix])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 279 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLFSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-70
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 279 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLFSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy Swiss-Prot
Match: Q49KU3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhA PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-62
Identity = 126/145 (86.90%), Postives = 130/145 (89.66%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           W+ISIPYI   ELFEINKV  VFG TI IFITLAKTY FLFISI TRWTLPRLRIDQLLN
Sbjct: 279 WNISIPYIFVPELFEINKVGRVFGTTIGIFITLAKTYFFLFISITTRWTLPRLRIDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQL SL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLLSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy Swiss-Prot
Match: A0ZZ90 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium barbadense OX=3634 GN=ndhA PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 5.0e-62
Identity = 122/145 (84.14%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLLSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           W+ISIPY+   ELFEINK+  + G TI IFITLAKTYLFLFISIATRWTLPRLR+DQLLN
Sbjct: 279 WNISIPYVFAPELFEINKINGIIGTTIGIFITLAKTYLFLFISIATRWTLPRLRMDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQL SL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLLSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy Swiss-Prot
Match: Q2L952 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhA PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 5.0e-62
Identity = 122/145 (84.14%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLLSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           W+ISIPY+   ELFEINK+  + G TI IFITLAKTYLFLFISIATRWTLPRLR+DQLLN
Sbjct: 279 WNISIPYVFAPELFEINKINGIIGTTIGIFITLAKTYLFLFISIATRWTLPRLRMDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQL SL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLLSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy Swiss-Prot
Match: Q09FZ1 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Platanus occidentalis OX=4403 GN=ndhA PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-61
Identity = 123/145 (84.83%), Postives = 130/145 (89.66%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           W++SIPYI   ELFEINKV  VFG TI IFITLAK YLFLFISI TRWTLPR+R+DQLLN
Sbjct: 279 WNLSIPYIFIPELFEINKVSGVFGTTIGIFITLAKAYLFLFISITTRWTLPRMRMDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTS QLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSSQLFSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy TrEMBL
Match: A0A218KGA1 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhA PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.2e-68
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 279 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLFSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy TrEMBL
Match: A0A1X9Q1Y4 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.2e-68
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 279 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLFSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy TrEMBL
Match: A0A1S4EU64 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo OX=3656 GN=ndhA PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.2e-68
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 279 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLFSL 363

[Close]

BLAST of Cmc10g0261371 vs. ExPASy TrEMBL
Match: A0A286NFL5 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhA PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.2e-68
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 220 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 279

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 280 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 339

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 340 LGWKFLLPISLGNLLLTTSFQLFSL 364

[Close]

BLAST of Cmc10g0261371 vs. ExPASy TrEMBL
Match: A0A286NG39 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=ndhA PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.2e-68
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG
Sbjct: 220 LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 279

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN
Sbjct: 280 WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 339

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 340 LGWKFLLPISLGNLLLTTSFQLFSL 364

[Close]

BLAST of Cmc10g0261371 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 229.9 bits (585), Expect = 1.3e-60
Identity = 119/145 (82.07%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MVFGVGICGRLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 60
           ++  +  C RLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG
Sbjct: 219 LISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGG 278

Query: 61  WDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLN 120
           W+ISIPYI   ELF+ +   ++FG TI IFITLAKTYLFLF+SIATRWTLPRLR+DQLLN
Sbjct: 279 WNISIPYISILELFQRD---QIFGTTIGIFITLAKTYLFLFVSIATRWTLPRLRMDQLLN 338

Query: 121 LGWKFLLPISLGNLLLTTSFQLFSL 146
           LGWKFLLPISLGNLLLTTSFQLFSL
Sbjct: 339 LGWKFLLPISLGNLLLTTSFQLFSL 360

[Close]

BLAST of Cmc10g0261371 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 10  RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIL 69
           R PFDLPEAE E VAGY  EYS +   LF++  Y N+++ S   T+ + GGW    P IL
Sbjct: 200 RAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCTLFFPGGW----PPIL 259

Query: 70  GYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPI 129
              +F+     ++ G   SI+ ++ K  LFLF+ I  R   PR R DQL+ LG K  LP+
Sbjct: 260 DLPIFK-----KIPG---SIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPL 312

Query: 130 SLGNLL 136
           SL  ++
Sbjct: 320 SLARVV 312

[Close]

BLAST of Cmc10g0261371 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 10  RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIL 69
           R PFDLPEAE E VAGY  EYS +   LF++  Y N+++ S   T+ + GGW    P IL
Sbjct: 200 RAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCTLFFPGGW----PPIL 259

Query: 70  GYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPI 129
              +F+     ++ G   SI+ ++ K  LFLF+ I  R   PR R DQL+ LG K  LP+
Sbjct: 260 DLPIFK-----KIPG---SIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPL 312

Query: 130 SLGNLL 136
           SL  ++
Sbjct: 320 SLARVV 312

[Close]

BLAST of Cmc10g0261371 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 10  RLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIL 69
           R PFDLPEAE E VAGY  EYS +   LF++  Y N+++ S   T+ + GGW    P IL
Sbjct: 200 RAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCTLFFPGGW----PPIL 259

Query: 70  GYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPI 129
              +F+     ++ G   SI+ ++ K  LFLF+ I  R   PR R DQL+ LG K  LP+
Sbjct: 260 DLPIFK-----KIPG---SIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPL 312

Query: 130 SLGNLL 136
           SL  ++
Sbjct: 320 SLARVV 312

The following BLAST results are available for this feature:

BLAST of Cmc10g0261371 vs. NCBI nr


Match Name	E-value	Identity	Description
QHB76020.1	1.7e-67	94.48	NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo]	[more]
YP_009004096.1	1.7e-67	94.48	NADH-plastoquinone oxidoreductase subunit 1 [Cucumis hystrix] >Q2QD36.1 RecName:...	[more]
YP_247655.1	1.7e-67	94.48	NADH dehydrogenase subunit 1 [Cucumis sativus] >CAJ00814.1 NADH dehydrogenase su...	[more]
ASY96384.1	1.7e-67	94.48	NADH dehydrogenase subunit 1 [Cucumis melo subsp. agrestis] >ASY96644.1 NADH deh...	[more]
QCY72897.1	1.7e-67	94.48	NdhA [Cucumis hystrix]	[more]

BLAST of Cmc10g0261371 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD36	2.2e-70	94.48	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q49KU3	1.3e-62	86.90	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Eucalyptus globulus s...	[more]
A0ZZ90	5.0e-62	84.14	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium barbadense ...	[more]
Q2L952	5.0e-62	84.14	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium hirsutum OX...	[more]
Q09FZ1	3.2e-61	84.83	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Platanus occidentalis...	[more]

BLAST of Cmc10g0261371 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KGA1	8.2e-68	94.48	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A1X9Q1Y4	8.2e-68	94.48	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1S4EU64	8.2e-68	94.48	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A286NFL5	8.2e-68	94.48	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. can...	[more]
A0A286NG39	8.2e-68	94.48	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. fle...	[more]

BLAST of Cmc10g0261371 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01100.1	1.3e-60	82.07	NADH dehydrogenase family protein	[more]
ATMG01120.1	3.6e-15	42.06	NADH dehydrogenase 1B	[more]
ATMG00516.1	3.6e-15	42.06	NADH dehydrogenase 1C	[more]
ATMG01275.1	3.6e-15	42.06	NADH dehydrogenase 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 3..137 e-value: 2.9E-43 score: 148.3
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 5..142
None	No IPR available	PANTHER	PTHR11432:SF3	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1	coord: 5..142
IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site	PROSITE	PS00668	COMPLEX1_ND1_2	coord: 12..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0261371.1	Cmc10g0261371.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding