Cmc08g0236391 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0236391
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr08: 32744555 .. 32745388 (+)
RNA-Seq Expression	Cmc08g0236391
Synteny	Cmc08g0236391

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAGTCCTTTGGCCTTATTAGTGTTGATGGGACGAATCCCTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAGGTTTCTCGGAGCATTTTGTCACTTATACACCCTCTGCCAGTAATGAGAAAATCCGGATAGCCAATGGCTCTTTAGCTTCGGTTGCTGGAAAAGGACAAATAGTCCTCTTTGACGGTTTCTCCCTCCAGAAGGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACCCGTGAGCTACACTGTAAAGCTACTTTCTTACCTGAGTCTGTTTGCTTTCAGGACTTGAATTCAGGAAGGACGATTGGCACTGCCCGGCATAGTAGGGGACTTTACATCCTTAATGATGATACCTCCGGTAGTAGTATCTTTACGACTAGTTTACTGTCTTCCTATTTTAGCACCTCTGAACATGACTTTATGTTGTGGCATTTTCGGTTAGGTCACCCGAACTTTACGTATATGAAATATTTGTTTCCCTATCTCTTTCTTAAAATAGATGTCTCCTTGTTATCTTGTGATGTGTGCATTCAGGCAAAACAATATCGTGTTTCTTTTCCCTCACAACCATATAAACCCACACAATCGTTTACCCTTATCCATAATGACGTTTGGGGTCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCACCAATAAATTTGAGGTTTCTTCTATTTTTCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAAATTGCTATTCTTCGGAGTGA

mRNA sequence

ATGTCTCAGTCCTTTGGCCTTATTAGTGTTGATGGGACGAATCCCTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAGGTTTCTCGGAGCATTTTGTCACTTATACACCCTCTGCCAGTAATGAGAAAATCCGGATAGCCAATGGCTCTTTAGCTTCGGTTGCTGGAAAAGGACAAATAGTCCTCTTTGACGGTTTCTCCCTCCAGAAGGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACCCGTGAGCTACACTGTAAAGCTACTTTCTTACCTGAGTCTGTTTGCTTTCAGGACTTGAATTCAGGAAGGACGATTGGCACTGCCCGGCATAGTAGGGGACTTTACATCCTTAATGATGATACCTCCGGTAGTAGTATCTTTACGACTAGTTTACTGTCTTCCTATTTTAGCACCTCTGAACATGACTTTATGTTGTGGCATTTTCGGTTAGGTCACCCGAACTTTACGTATATGAAATATTTGTTTCCCTATCTCTTTCTTAAAATAGATGTCTCCTTGTTATCTTGTGATGTGTGCATTCAGGCAAAACAATATCGTGTTTCTTTTCCCTCACAACCATATAAACCCACACAATCGTTTACCCTTATCCATAATGACGTTTGGGGTCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCACCAATAAATTTGAGGTTTCTTCTATTTTTCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAAATTGCTATTCTTCGGAGTGA

Coding sequence (CDS)

ATGTCTCAGTCCTTTGGCCTTATTAGTGTTGATGGGACGAATCCCTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAGGTTTCTCGGAGCATTTTGTCACTTATACACCCTCTGCCAGTAATGAGAAAATCCGGATAGCCAATGGCTCTTTAGCTTCGGTTGCTGGAAAAGGACAAATAGTCCTCTTTGACGGTTTCTCCCTCCAGAAGGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACCCGTGAGCTACACTGTAAAGCTACTTTCTTACCTGAGTCTGTTTGCTTTCAGGACTTGAATTCAGGAAGGACGATTGGCACTGCCCGGCATAGTAGGGGACTTTACATCCTTAATGATGATACCTCCGGTAGTAGTATCTTTACGACTAGTTTACTGTCTTCCTATTTTAGCACCTCTGAACATGACTTTATGTTGTGGCATTTTCGGTTAGGTCACCCGAACTTTACGTATATGAAATATTTGTTTCCCTATCTCTTTCTTAAAATAGATGTCTCCTTGTTATCTTGTGATGTGTGCATTCAGGCAAAACAATATCGTGTTTCTTTTCCCTCACAACCATATAAACCCACACAATCGTTTACCCTTATCCATAATGACGTTTGGGGTCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCACCAATAAATTTGAGGTTTCTTCTATTTTTCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAAATTGCTATTCTTCGGAGTGA

Protein sequence

MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQIVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHSRGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDVSLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITNKFEVSSIFQNFYHTIETQFHKKNCYSSE

Homology

[Close]

BLAST of Cmc08g0236391 vs. NCBI nr
Match: KAA0066242.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYJ97679.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 488.4 bits (1256), Expect = 4.0e-134
Identity = 240/271 (88.56%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M Q   LISVDGTN WILDS ATDHLTGFSEHFVTYTP A NEKIRI +GSLA +AGKGQ
Sbjct: 91  MFQPLDLISVDGTNLWILDSRATDHLTGFSEHFVTYTPCAGNEKIRIVDGSLAPIAGKGQ 150

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           I+L+DGFSLQ VLHVPKLSYNLLSISKITRELH KATFLPESV FQ+LNSGRTIGTARHS
Sbjct: 151 IILYDGFSLQNVLHVPKLSYNLLSISKITRELHYKATFLPESVYFQNLNSGRTIGTARHS 210

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYILNDDTSGSSI TTSLLSSY STSEHD+MLWHFRLGHPNFTYMKYLFP+LFLKIDV
Sbjct: 211 RGLYILNDDTSGSSISTTSLLSSYLSTSEHDYMLWHFRLGHPNFTYMKYLFPHLFLKIDV 270

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ FTLIH+DVWGPSKVTT SGKRWFVTFIDDHTR
Sbjct: 271 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTLSGKRWFVTFIDDHTR 330

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLIT+K EVS+IFQNFYHTIETQFHKK
Sbjct: 331 LTWVYLITDKSEVSAIFQNFYHTIETQFHKK 361

[Close]

BLAST of Cmc08g0236391 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 738

[Close]

BLAST of Cmc08g0236391 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 738

[Close]

BLAST of Cmc08g0236391 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 738

[Close]

BLAST of Cmc08g0236391 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 500 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 559

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 560 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 619

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 620 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 679

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 680 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 739

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 740 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 770

[Close]

BLAST of Cmc08g0236391 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.9e-24
Identity = 76/264 (28.79%), Postives = 121/264 (45.83%), Query Frame = 0


Query: 14  NPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQIVL---FDGFSLQ 73
           N W+LDSGAT H+T    +   + P    + + IA+GS   +   G   L        L 
Sbjct: 308 NNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLN 367

Query: 74  KVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHSRGLYILNDDT 133
           KVL+VP +  NL+S+ ++         F P S   +DLN+G  +   +    LY    + 
Sbjct: 368 KVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY----EW 427

Query: 134 SGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKI---DVSLLSCDV 193
             +S    S+ +S  S + H    WH RLGHP+   +  +     L +      LLSC  
Sbjct: 428 PIASSQAVSMFASPCSKATHS--SWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSD 487

Query: 194 CIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI 253
           C   K ++V F +     ++    I++DVW  S + +    R++V F+D  TR TW+Y +
Sbjct: 488 CFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPL 547

Query: 254 TNKFEVSSIFQNFYHTIETQFHKK 272
             K +V   F  F   +E +F  +
Sbjct: 548 KQKSQVKDTFIIFKSLVENRFQTR 564

[Close]

BLAST of Cmc08g0236391 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.3e-23
Identity = 74/265 (27.92%), Postives = 122/265 (46.04%), Query Frame = 0


Query: 13  TNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQIVLFD---GFSL 72
           +N W+LDSGAT H+T    +   + P    + + +A+GS   ++  G   L       +L
Sbjct: 328 SNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNL 387

Query: 73  QKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHSRGLYILNDD 132
             +L+VP +  NL+S+ ++         F P S   +DLN+G  +   +    LY    +
Sbjct: 388 HNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY----E 447

Query: 133 TSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKI---DVSLLSCD 192
              +S    SL +S  S + H    WH RLGHP  + +  +     L +       LSC 
Sbjct: 448 WPIASSQPVSLFASPSSKATHS--SWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCS 507

Query: 193 VCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYL 252
            C+  K  +V F       T+    I++DVW  S + +    R++V F+D  TR TW+Y 
Sbjct: 508 DCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYP 567

Query: 253 ITNKFEVSSIFQNFYHTIETQFHKK 272
           +  K +V   F  F + +E +F  +
Sbjct: 568 LKQKSQVKETFITFKNLLENRFQTR 585

[Close]

BLAST of Cmc08g0236391 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-19
Identity = 72/263 (27.38%), Postives = 125/263 (47.53%), Query Frame = 0


Query: 16  WILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQIVLFDGFS----LQK 75
           W++D+ A+ H T   + F  Y  +     +++ N S + +AG G I +         L+ 
Sbjct: 294 WVVDTAASHHATPVRDLFCRYV-AGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKD 353

Query: 76  VLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHSRG-LYILNDDT 135
           V HVP L  NL+S   + R+ + ++ F  +      L  G  +     +RG LY  N + 
Sbjct: 354 VRHVPDLRMNLISGIALDRDGY-ESYFANQK---WRLTKGSLVIAKGVARGTLYRTNAEI 413

Query: 136 SGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKI--DVSLLSCDVC 195
               +          +  E    LWH R+GH +   ++ L     +      ++  CD C
Sbjct: 414 CQGELNA--------AQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYC 473

Query: 196 IQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLIT 255
           +  KQ+RVSF +   +      L+++DV GP ++ +  G ++FVTFIDD +R  WVY++ 
Sbjct: 474 LFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILK 533

Query: 256 NKFEVSSIFQNFYHTIETQFHKK 272
            K +V  +FQ F+  +E +  +K
Sbjct: 534 TKDQVFQVFQKFHALVERETGRK 543

[Close]

BLAST of Cmc08g0236391 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-11
Identity = 72/273 (26.37%), Postives = 117/273 (42.86%), Query Frame = 0


Query: 16  WILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQIVLFDG---FSLQKV 75
           ++LDSGA+DHL      +          KI +A       A K  IV        +L+ V
Sbjct: 289 FVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDV 348

Query: 76  LHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHSRGLYILNDDTSG 135
           L   + + NL+S+ ++              +  +   SG TI       GL ++ +    
Sbjct: 349 LFCKEAAGNLMSVKRLQE----------AGMSIEFDKSGVTIS----KNGLMVVKNSGML 408

Query: 136 SSIFTTSLLSSYFSTSEH--DFMLWHFRLGHPNFTYM-----KYLF--PYLFLKIDVSLL 195
           +++   +   +Y   ++H  +F LWH R GH +   +     K +F    L   +++S  
Sbjct: 409 NNVPVIN-FQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE 468

Query: 196 SCDVCIQAKQYRVSFPSQPYKP--TQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTRL 255
            C+ C+  KQ R+ F     K    +   ++H+DV GP    T   K +FV F+D  T  
Sbjct: 469 ICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHY 528

Query: 256 TWVYLITNKFEVSSIFQNFYHTIETQFHKKNCY 275
              YLI  K +V S+FQ+F    E  F+ K  Y
Sbjct: 529 CVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVY 546

[Close]

BLAST of Cmc08g0236391 vs. ExPASy TrEMBL
Match: A0A5A7VD20 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00520 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 240/271 (88.56%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M Q   LISVDGTN WILDS ATDHLTGFSEHFVTYTP A NEKIRI +GSLA +AGKGQ
Sbjct: 91  MFQPLDLISVDGTNLWILDSRATDHLTGFSEHFVTYTPCAGNEKIRIVDGSLAPIAGKGQ 150

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           I+L+DGFSLQ VLHVPKLSYNLLSISKITRELH KATFLPESV FQ+LNSGRTIGTARHS
Sbjct: 151 IILYDGFSLQNVLHVPKLSYNLLSISKITRELHYKATFLPESVYFQNLNSGRTIGTARHS 210

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYILNDDTSGSSI TTSLLSSY STSEHD+MLWHFRLGHPNFTYMKYLFP+LFLKIDV
Sbjct: 211 RGLYILNDDTSGSSISTTSLLSSYLSTSEHDYMLWHFRLGHPNFTYMKYLFPHLFLKIDV 270

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ FTLIH+DVWGPSKVTT SGKRWFVTFIDDHTR
Sbjct: 271 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTLSGKRWFVTFIDDHTR 330

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLIT+K EVS+IFQNFYHTIETQFHKK
Sbjct: 331 LTWVYLITDKSEVSAIFQNFYHTIETQFHKK 361

[Close]

BLAST of Cmc08g0236391 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.9e-128
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 738

[Close]

BLAST of Cmc08g0236391 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.9e-128
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 738

[Close]

BLAST of Cmc08g0236391 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.9e-128
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 738

[Close]

BLAST of Cmc08g0236391 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.9e-128
Identity = 227/271 (83.76%), Postives = 246/271 (90.77%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPSASNEKIRIANGSLASVAGKGQ 60
           M QS GLISVDG NPWILDSGATDHLTG SEHF++Y P A NEKIRIA+GSLA +AGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQKVLHVPKLSYNLLSISKITRELHCKATFLPESVCFQDLNSGRTIGTARHS 120
           IV FDGF+LQ VLHVPKLSYNLLSISKITRELHCKA FLPESV FQD++SGRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSIFTTSLLSSYFSTSEHDFMLWHFRLGHPNFTYMKYLFPYLFLKIDV 180
           RGLYIL+DDTS SS+   SLLSSYFSTSE D MLWHFRLGHPNFTYM++LFP+LF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SLLSCDVCIQAKQYRVSFPSQPYKPTQSFTLIHNDVWGPSKVTTSSGKRWFVTFIDDHTR 240
           S LSCDVCI+AKQ+RVSFPSQPYKPTQ F LIH+DVWGPSKVTTSSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLITNKFEVSSIFQNFYHTIETQFHKK 272
           LTWVYLI++K EV SIFQNFYHTI+TQFH K
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTK 738

The following BLAST results are available for this feature:

BLAST of Cmc08g0236391 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066242.1	4.0e-134	88.56	Beta-galactosidase [Cucumis melo var. makuwa] >TYJ97679.1 Beta-galactosidase [Cu...	[more]
TYJ99952.1	1.6e-127	83.76	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	1.6e-127	83.76	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	1.6e-127	83.76	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	1.6e-127	83.76	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0236391 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	7.9e-24	28.79	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.3e-23	27.92	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	1.5e-19	27.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.6e-11	26.37	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc08g0236391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD20	2.0e-134	88.56	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00...	[more]
A0A5D3BJK7	7.9e-128	83.76	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	7.9e-128	83.76	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	7.9e-128	83.76	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	7.9e-128	83.76	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]

BLAST of Cmc08g0236391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 122..193 e-value: 3.0E-15 score: 55.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 200..275 e-value: 1.0E-9 score: 40.0
None	No IPR available	PANTHER	PTHR34222:SF50	SUBFAMILY NOT NAMED	coord: 14..131
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 14..131
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 203..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0236391.1	Cmc08g0236391.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003676	nucleic acid binding