Cmc08g0232981 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0232981
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	F-box domain-containing protein
Location	CMiso1.1chr08: 30137363 .. 30138934 (-)
RNA-Seq Expression	Cmc08g0232981
Synteny	Cmc08g0232981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGGTAACTTTTAGTGCTTTTGTACACATTGAGAAGCTACGTTACGTAACATGGGGTCCGTTGGGTTGATTTTAAGACTCTGGTAATATTTGTTTTTTTCTTTTTTTTTTTAATTTAAGTGATCAAAATTTTTAAAAATGAAAATTGAAAAAATATTTACCATCATACAAAAAATATTTAAAAAGTAGTTTCTAATTTTTAAAAAAGCAAACATCATCGATGCATGCATCTCACCAGAAATTTTCAATTATAACGTTGACACGTCTCATACCGGGTGTGATGTCGCATGAACGCAAGTATTACCCATTTTTTATTTCGGTTTTAGTGGGTCTATCTCAACCTGAACTTTTTTCATGGAAGAAGTTAGAGAAATTATTTTATATGACAACTGTTAAAAATACTTTAGTAAAAATGATCAAACTGGTAAAGTGATTTTTTTTTTTTTTCCTTTTTTACCATTTTGCTGTATACATGAAAAGAACCTGAGGAGTTATTGTTTGCAAGATTTCACATACGATCACATGTTTCTAGACAATTCACGTAATAAAAGACCTAAAACATTCTCTCTTTTTTCCCGATAAAATCAATCCAAAAGTTTGAAAAGTAATTAACGTAGCTTTTATTTTTGTTCATTTATTTTGTTTATAACTGTACTAAAAAATGCTAAAATGCTAGCTAAAATTCGAATGTATATGTAATTCTTCATTCCATGAAAACTTGTAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG

mRNA sequence

ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG

Coding sequence (CDS)

ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG

Protein sequence

MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV

Homology

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BLAST of Cmc08g0232981 vs. NCBI nr
Match: XP_008449214.1 (PREDICTED: probable F-box protein At5g04010 [Cucumis melo] >KAA0047228.1 putative F-box protein [Cucumis melo var. makuwa] >TYK21759.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 571.2 bits (1471), Expect = 4.8e-159
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII
Sbjct: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
           ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180

Query: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
           WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN
Sbjct: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240

Query: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 283

[Close]

BLAST of Cmc08g0232981 vs. NCBI nr
Match: XP_031740421.1 (probable F-box protein At5g04010 [Cucumis sativus] >KAE8649452.1 hypothetical protein Csa_018886 [Cucumis sativus])

HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150
Identity = 269/284 (94.72%), Postives = 276/284 (97.18%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLA+AP +SP VSFRRLFGLGYIAAARRRPAQ KP+LSLSDLVFVISISFT+KD+  I
Sbjct: 61  LFNLATAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSI 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENG-AAPVVIGAREEVEV 180
           ACDGVNKEEKAPRPQSSLT+VKHGEELPV+RNGLFKFDINLNENG  APVVIGAREEVEV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGAPVVIGAREEVEV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 240
           VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGGIVGDLRLGLCG
Sbjct: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 240

Query: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284

[Close]

BLAST of Cmc08g0232981 vs. NCBI nr
Match: XP_038883618.1 (probable F-box protein At5g04010 [Benincasa hispida])

HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-123
Identity = 239/289 (82.70%), Postives = 253/289 (87.54%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MA PLPSL SSPPPWEV+LLVAERLDPKTLATASCVCK WS+SMASDHLWEPIFTANFPS
Sbjct: 1   MAPPLPSL-SSPPPWEVLLLVAERLDPKTLATASCVCKFWSISMASDHLWEPIFTANFPS 60

Query: 61  LFNLA---SAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQ 120
           L NLA   SAPT SPPVSFRRLFGLG+ AAARRRPA  KPTLSLSDL+FVISIS TDKD+
Sbjct: 61  LSNLAISSSAPT-SPPVSFRRLFGLGHTAAARRRPAPSKPTLSLSDLIFVISISSTDKDR 120

Query: 121 SIIACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINL---NENGAAPVVIGAR 180
            I+  + V K +KAP PQS LTVVKHG EL V+RNGLFKFDINL   N N   PVVIG R
Sbjct: 121 YIVGHELVEK-DKAP-PQSILTVVKHGGELAVDRNGLFKFDINLDGDNGNKGGPVVIGGR 180

Query: 181 EEVEVVWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLR 240
           EEVEVVWN+VLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCC N VSGGIV DL+
Sbjct: 181 EEVEVVWNLVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCSNVVSGGIVADLK 240

Query: 241 LGLCGNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           LGL GN GG +KVRIESVSVGMMS+VSWRYVSLDDGLMYLQHFLFNA+V
Sbjct: 241 LGLRGNNGGGSKVRIESVSVGMMSIVSWRYVSLDDGLMYLQHFLFNASV 285

[Close]

BLAST of Cmc08g0232981 vs. NCBI nr
Match: XP_022925168.1 (probable F-box protein At5g04010 [Cucurbita moschata])

HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-111
Identity = 217/283 (76.68%), Postives = 237/283 (83.75%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQ L     SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS++LWEPIF+A FPS
Sbjct: 1   MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAKFPS 60

Query: 61  LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
           L NL AS+ T+SPPVSFRRLFGLG+ AAARRRPA  KP LSLSDLVFVIS+S TDK    
Sbjct: 61  LTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILSLSDLVFVISVSGTDKANGC 120

Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
           I   G  KEEK   P+   TVVKHG EL V+RN LFKFDIN++ NG   VVIGA EEVEV
Sbjct: 121 IVSGGTKKEEK-DVPEPMFTVVKHGGELAVDRNRLFKFDINVS-NGDEVVVIGAGEEVEV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
           VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP  VSGGIV DL+LG+C 
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240

Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
            G GG ++KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280

[Close]

BLAST of Cmc08g0232981 vs. NCBI nr
Match: XP_023518459.1 (probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.9 bits (1047), Expect = 7.1e-110
Identity = 215/283 (75.97%), Postives = 235/283 (83.04%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQ L     SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS++LWEPIF+A FPS
Sbjct: 1   MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAKFPS 60

Query: 61  LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
           L NL AS+ T+SPPVSFRRLFGLG+ AAARRRPA  KP L LSDLVFVIS+S TDK    
Sbjct: 61  LTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILCLSDLVFVISVSSTDKADRC 120

Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
           I   G  KEEK   P+   TVVKHG EL V+RNGLFKFDIN++ N    VVIGA EEV V
Sbjct: 121 IVGAGAKKEEK-DVPEPMFTVVKHGGELAVDRNGLFKFDINVS-NSDEVVVIGAGEEVGV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
           VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP  VSGGIV DL+LG+C 
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240

Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
            G GG ++KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280

[Close]

BLAST of Cmc08g0232981 vs. ExPASy Swiss-Prot
Match: Q5EAF6 (Probable F-box protein At5g04010 OS=Arabidopsis thaliana OX=3702 GN=NSFBx PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-22
Identity = 81/273 (29.67%), Postives = 131/273 (47.99%), Query Frame = 0


Query: 11  SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
           SPP WE++ LV   +DP++LA ASCV  +WS   +S+ LW+ +  A   S+F  A     
Sbjct: 51  SPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSL-PATRHSIFAKAITKEG 110

Query: 71  SPP--VSFRRLFGLGYIAAARRRPAQ-LKPTLSLSDLVFVISISFTDKDQSIIACDGVNK 130
           + P  +S++RL      AA RRR  Q  +P +SLSDLVF++ +S   K+           
Sbjct: 111 AKPAWLSYKRLISEAESAAKRRRNNQPAEPKISLSDLVFIVHVSAGSKE----------- 170

Query: 131 EEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEG 190
                       VVK G++L    N  F+ + ++ ++G         ++V + WN+VL  
Sbjct: 171 ----------AVVVKQGKDLVFGSNERFQIEADVRDSG----FTADMKDVSMSWNVVLRN 230

Query: 191 WRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG--IVGDLRLGLCGNGGGSN 250
           +  +F M E    +       GWF++ELP      N    G  +VG+++          N
Sbjct: 231 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDGSNLVGEVKPSF-------N 285

Query: 251 KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
           +  ++ V   +    +W+ + +DD L YLQ FL
Sbjct: 291 EDVLDKVVFAIADSRNWKSLFVDDVLRYLQCFL 285

[Close]

BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match: A0A5D3DEJ6 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00070 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.3e-159
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII
Sbjct: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
           ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180

Query: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
           WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN
Sbjct: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240

Query: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 283

[Close]

BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match: A0A1S3BLJ1 (probable F-box protein At5g04010 OS=Cucumis melo OX=3656 GN=LOC103491161 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.3e-159
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII
Sbjct: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
           ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180

Query: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
           WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN
Sbjct: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240

Query: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 283

[Close]

BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match: A0A0A0LDE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G497390 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 8.9e-151
Identity = 269/284 (94.72%), Postives = 276/284 (97.18%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLA+AP +SP VSFRRLFGLGYIAAARRRPAQ KP+LSLSDLVFVISISFT+KD+  I
Sbjct: 61  LFNLATAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSI 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENG-AAPVVIGAREEVEV 180
           ACDGVNKEEKAPRPQSSLT+VKHGEELPV+RNGLFKFDINLNENG  APVVIGAREEVEV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGAPVVIGAREEVEV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 240
           VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGGIVGDLRLGLCG
Sbjct: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 240

Query: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284

[Close]

BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match: A0A6J1EEG3 (probable F-box protein At5g04010 OS=Cucurbita moschata OX=3662 GN=LOC111432489 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.1e-111
Identity = 217/283 (76.68%), Postives = 237/283 (83.75%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQ L     SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS++LWEPIF+A FPS
Sbjct: 1   MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAKFPS 60

Query: 61  LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
           L NL AS+ T+SPPVSFRRLFGLG+ AAARRRPA  KP LSLSDLVFVIS+S TDK    
Sbjct: 61  LTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILSLSDLVFVISVSGTDKANGC 120

Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
           I   G  KEEK   P+   TVVKHG EL V+RN LFKFDIN++ NG   VVIGA EEVEV
Sbjct: 121 IVSGGTKKEEK-DVPEPMFTVVKHGGELAVDRNRLFKFDINVS-NGDEVVVIGAGEEVEV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
           VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP  VSGGIV DL+LG+C 
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240

Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
            G GG ++KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280

[Close]

BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match: A0A6J1HMX9 (probable F-box protein At5g04010 OS=Cucurbita maxima OX=3661 GN=LOC111466077 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 1.0e-109
Identity = 212/283 (74.91%), Postives = 236/283 (83.39%), Query Frame = 0


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQ L     SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS+HLWEPIF+A FPS
Sbjct: 1   MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNHLWEPIFSAKFPS 60

Query: 61  LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
           L NL AS+ T+SPP+SF RLFGLG+ AAARRRPA  KP LSLSDL+FVIS+S TDK    
Sbjct: 61  LTNLAASSATASPPLSFCRLFGLGHTAAARRRPAPSKPILSLSDLIFVISVSGTDKADGC 120

Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
           I   G  KEEK   P+   T+VKHG EL V+RNGLFKFDIN+++ G   VVIGA  EVEV
Sbjct: 121 IVGGGATKEEK-DVPELMFTIVKHGGELVVDRNGLFKFDINVSK-GDEAVVIGAGGEVEV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
           VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP  VSGGIV DL+LG+C 
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240

Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
            G GG +++VRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDEVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280

[Close]

BLAST of Cmc08g0232981 vs. TAIR 10
Match: AT5G04010.1 (F-box family protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-23
Identity = 81/273 (29.67%), Postives = 131/273 (47.99%), Query Frame = 0


Query: 11  SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
           SPP WE++ LV   +DP++LA ASCV  +WS   +S+ LW+ +  A   S+F  A     
Sbjct: 51  SPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSL-PATRHSIFAKAITKEG 110

Query: 71  SPP--VSFRRLFGLGYIAAARRRPAQ-LKPTLSLSDLVFVISISFTDKDQSIIACDGVNK 130
           + P  +S++RL      AA RRR  Q  +P +SLSDLVF++ +S   K+           
Sbjct: 111 AKPAWLSYKRLISEAESAAKRRRNNQPAEPKISLSDLVFIVHVSAGSKE----------- 170

Query: 131 EEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEG 190
                       VVK G++L    N  F+ + ++ ++G         ++V + WN+VL  
Sbjct: 171 ----------AVVVKQGKDLVFGSNERFQIEADVRDSG----FTADMKDVSMSWNVVLRN 230

Query: 191 WRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG--IVGDLRLGLCGNGGGSN 250
           +  +F M E    +       GWF++ELP      N    G  +VG+++          N
Sbjct: 231 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDGSNLVGEVKPSF-------N 285

Query: 251 KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
           +  ++ V   +    +W+ + +DD L YLQ FL
Sbjct: 291 EDVLDKVVFAIADSRNWKSLFVDDVLRYLQCFL 285

[Close]

BLAST of Cmc08g0232981 vs. TAIR 10
Match: AT4G24210.1 (F-box family protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.5e-04
Identity = 33/106 (31.13%), Postives = 48/106 (45.28%), Query Frame = 0


Query: 21  VAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTSSPPV-----S 80
           V + +D KTLA +SCV K W  +   + LWE I T ++    N+         V      
Sbjct: 43  VLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWT---NIGCGQNQLRSVVLALGG 102

Query: 81  FRRLFGLGYIAAARRRPA------QLKPTLSLSDLVFVISISFTDK 116
           FRRL  L     ++  P       +LK TLSL  + +   +SFT +
Sbjct: 103 FRRLHSLYLWPLSKPNPRARFGKDELKLTLSLLSIRYYEKMSFTKR 145

The following BLAST results are available for this feature:

BLAST of Cmc08g0232981 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449214.1	4.8e-159	100.00	PREDICTED: probable F-box protein At5g04010 [Cucumis melo] >KAA0047228.1 putativ...	[more]
XP_031740421.1	1.8e-150	94.72	probable F-box protein At5g04010 [Cucumis sativus] >KAE8649452.1 hypothetical pr...	[more]
XP_038883618.1	1.5e-123	82.70	probable F-box protein At5g04010 [Benincasa hispida]	[more]
XP_022925168.1	2.2e-111	76.68	probable F-box protein At5g04010 [Cucurbita moschata]	[more]
XP_023518459.1	7.1e-110	75.97	probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc08g0232981 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5EAF6	3.4e-22	29.67	Probable F-box protein At5g04010 OS=Arabidopsis thaliana OX=3702 GN=NSFBx PE=2 S...	[more]

BLAST of Cmc08g0232981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DEJ6	2.3e-159	100.00	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BLJ1	2.3e-159	100.00	probable F-box protein At5g04010 OS=Cucumis melo OX=3656 GN=LOC103491161 PE=4 SV...	[more]
A0A0A0LDE5	8.9e-151	94.72	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G497390 PE=4 ...	[more]
A0A6J1EEG3	1.1e-111	76.68	probable F-box protein At5g04010 OS=Cucurbita moschata OX=3662 GN=LOC111432489 P...	[more]
A0A6J1HMX9	1.0e-109	74.91	probable F-box protein At5g04010 OS=Cucurbita maxima OX=3661 GN=LOC111466077 PE=...	[more]

BLAST of Cmc08g0232981 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04010.1	2.4e-23	29.67	F-box family protein	[more]
AT4G24210.1	9.5e-04	31.13	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 14..52 e-value: 5.8E-5 score: 22.8
None	No IPR available	GENE3D	1.20.1280.50		coord: 8..97 e-value: 1.0E-7 score: 33.8
None	No IPR available	PANTHER	PTHR12874:SF16	F-BOX PROTEIN	coord: 9..267
IPR045118	F-box only protein FBXO9/FBXO48	PANTHER	PTHR12874	F-BOX ONLY PROTEIN 48-RELATED	coord: 9..267
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 14..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0232981.1	Cmc08g0232981.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding