Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGGTAACTTTTAGTGCTTTTGTACACATTGAGAAGCTACGTTACGTAACATGGGGTCCGTTGGGTTGATTTTAAGACTCTGGTAATATTTGTTTTTTTCTTTTTTTTTTTAATTTAAGTGATCAAAATTTTTAAAAATGAAAATTGAAAAAATATTTACCATCATACAAAAAATATTTAAAAAGTAGTTTCTAATTTTTAAAAAAGCAAACATCATCGATGCATGCATCTCACCAGAAATTTTCAATTATAACGTTGACACGTCTCATACCGGGTGTGATGTCGCATGAACGCAAGTATTACCCATTTTTTATTTCGGTTTTAGTGGGTCTATCTCAACCTGAACTTTTTTCATGGAAGAAGTTAGAGAAATTATTTTATATGACAACTGTTAAAAATACTTTAGTAAAAATGATCAAACTGGTAAAGTGATTTTTTTTTTTTTTCCTTTTTTACCATTTTGCTGTATACATGAAAAGAACCTGAGGAGTTATTGTTTGCAAGATTTCACATACGATCACATGTTTCTAGACAATTCACGTAATAAAAGACCTAAAACATTCTCTCTTTTTTCCCGATAAAATCAATCCAAAAGTTTGAAAAGTAATTAACGTAGCTTTTATTTTTGTTCATTTATTTTGTTTATAACTGTACTAAAAAATGCTAAAATGCTAGCTAAAATTCGAATGTATATGTAATTCTTCATTCCATGAAAACTTGTAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG
mRNA sequence
ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG
Coding sequence (CDS)
ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG
Protein sequence
MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Homology
BLAST of Cmc08g0232981 vs. NCBI nr
Match:
XP_008449214.1 (PREDICTED: probable F-box protein At5g04010 [Cucumis melo] >KAA0047228.1 putative F-box protein [Cucumis melo var. makuwa] >TYK21759.1 putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 571.2 bits (1471), Expect = 4.8e-159
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
Query: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII
Sbjct: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
Query: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN
Sbjct: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
Query: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 283
BLAST of Cmc08g0232981 vs. NCBI nr
Match:
XP_031740421.1 (probable F-box protein At5g04010 [Cucumis sativus] >KAE8649452.1 hypothetical protein Csa_018886 [Cucumis sativus])
HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150
Identity = 269/284 (94.72%), Postives = 276/284 (97.18%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
Query: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
LFNLA+AP +SP VSFRRLFGLGYIAAARRRPAQ KP+LSLSDLVFVISISFT+KD+ I
Sbjct: 61 LFNLATAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSI 120
Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENG-AAPVVIGAREEVEV 180
ACDGVNKEEKAPRPQSSLT+VKHGEELPV+RNGLFKFDINLNENG APVVIGAREEVEV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGAPVVIGAREEVEV 180
Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 240
VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGGIVGDLRLGLCG
Sbjct: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 240
Query: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
BLAST of Cmc08g0232981 vs. NCBI nr
Match:
XP_038883618.1 (probable F-box protein At5g04010 [Benincasa hispida])
HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-123
Identity = 239/289 (82.70%), Postives = 253/289 (87.54%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MA PLPSL SSPPPWEV+LLVAERLDPKTLATASCVCK WS+SMASDHLWEPIFTANFPS
Sbjct: 1 MAPPLPSL-SSPPPWEVLLLVAERLDPKTLATASCVCKFWSISMASDHLWEPIFTANFPS 60
Query: 61 LFNLA---SAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQ 120
L NLA SAPT SPPVSFRRLFGLG+ AAARRRPA KPTLSLSDL+FVISIS TDKD+
Sbjct: 61 LSNLAISSSAPT-SPPVSFRRLFGLGHTAAARRRPAPSKPTLSLSDLIFVISISSTDKDR 120
Query: 121 SIIACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINL---NENGAAPVVIGAR 180
I+ + V K +KAP PQS LTVVKHG EL V+RNGLFKFDINL N N PVVIG R
Sbjct: 121 YIVGHELVEK-DKAP-PQSILTVVKHGGELAVDRNGLFKFDINLDGDNGNKGGPVVIGGR 180
Query: 181 EEVEVVWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLR 240
EEVEVVWN+VLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCC N VSGGIV DL+
Sbjct: 181 EEVEVVWNLVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCSNVVSGGIVADLK 240
Query: 241 LGLCGNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
LGL GN GG +KVRIESVSVGMMS+VSWRYVSLDDGLMYLQHFLFNA+V
Sbjct: 241 LGLRGNNGGGSKVRIESVSVGMMSIVSWRYVSLDDGLMYLQHFLFNASV 285
BLAST of Cmc08g0232981 vs. NCBI nr
Match:
XP_022925168.1 (probable F-box protein At5g04010 [Cucurbita moschata])
HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-111
Identity = 217/283 (76.68%), Postives = 237/283 (83.75%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQ L SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS++LWEPIF+A FPS
Sbjct: 1 MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAKFPS 60
Query: 61 LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
L NL AS+ T+SPPVSFRRLFGLG+ AAARRRPA KP LSLSDLVFVIS+S TDK
Sbjct: 61 LTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILSLSDLVFVISVSGTDKANGC 120
Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
I G KEEK P+ TVVKHG EL V+RN LFKFDIN++ NG VVIGA EEVEV
Sbjct: 121 IVSGGTKKEEK-DVPEPMFTVVKHGGELAVDRNRLFKFDINVS-NGDEVVVIGAGEEVEV 180
Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGGIV DL+LG+C
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240
Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
G GG ++KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Cmc08g0232981 vs. NCBI nr
Match:
XP_023518459.1 (probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 407.9 bits (1047), Expect = 7.1e-110
Identity = 215/283 (75.97%), Postives = 235/283 (83.04%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQ L SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS++LWEPIF+A FPS
Sbjct: 1 MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAKFPS 60
Query: 61 LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
L NL AS+ T+SPPVSFRRLFGLG+ AAARRRPA KP L LSDLVFVIS+S TDK
Sbjct: 61 LTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILCLSDLVFVISVSSTDKADRC 120
Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
I G KEEK P+ TVVKHG EL V+RNGLFKFDIN++ N VVIGA EEV V
Sbjct: 121 IVGAGAKKEEK-DVPEPMFTVVKHGGELAVDRNGLFKFDINVS-NSDEVVVIGAGEEVGV 180
Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGGIV DL+LG+C
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240
Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
G GG ++KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Cmc08g0232981 vs. ExPASy Swiss-Prot
Match:
Q5EAF6 (Probable F-box protein At5g04010 OS=Arabidopsis thaliana OX=3702 GN=NSFBx PE=2 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 3.4e-22
Identity = 81/273 (29.67%), Postives = 131/273 (47.99%), Query Frame = 0
Query: 11 SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
SPP WE++ LV +DP++LA ASCV +WS +S+ LW+ + A S+F A
Sbjct: 51 SPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSL-PATRHSIFAKAITKEG 110
Query: 71 SPP--VSFRRLFGLGYIAAARRRPAQ-LKPTLSLSDLVFVISISFTDKDQSIIACDGVNK 130
+ P +S++RL AA RRR Q +P +SLSDLVF++ +S K+
Sbjct: 111 AKPAWLSYKRLISEAESAAKRRRNNQPAEPKISLSDLVFIVHVSAGSKE----------- 170
Query: 131 EEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEG 190
VVK G++L N F+ + ++ ++G ++V + WN+VL
Sbjct: 171 ----------AVVVKQGKDLVFGSNERFQIEADVRDSG----FTADMKDVSMSWNVVLRN 230
Query: 191 WRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG--IVGDLRLGLCGNGGGSN 250
+ +F M E + GWF++ELP N G +VG+++ N
Sbjct: 231 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDGSNLVGEVKPSF-------N 285
Query: 251 KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
+ ++ V + +W+ + +DD L YLQ FL
Sbjct: 291 EDVLDKVVFAIADSRNWKSLFVDDVLRYLQCFL 285
BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match:
A0A5D3DEJ6 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00070 PE=4 SV=1)
HSP 1 Score: 571.2 bits (1471), Expect = 2.3e-159
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
Query: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII
Sbjct: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
Query: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN
Sbjct: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
Query: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 283
BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match:
A0A1S3BLJ1 (probable F-box protein At5g04010 OS=Cucumis melo OX=3656 GN=LOC103491161 PE=4 SV=1)
HSP 1 Score: 571.2 bits (1471), Expect = 2.3e-159
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
Query: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII
Sbjct: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
Query: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN
Sbjct: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
Query: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 283
BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match:
A0A0A0LDE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G497390 PE=4 SV=1)
HSP 1 Score: 542.7 bits (1397), Expect = 8.9e-151
Identity = 269/284 (94.72%), Postives = 276/284 (97.18%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
Query: 61 LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
LFNLA+AP +SP VSFRRLFGLGYIAAARRRPAQ KP+LSLSDLVFVISISFT+KD+ I
Sbjct: 61 LFNLATAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSI 120
Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENG-AAPVVIGAREEVEV 180
ACDGVNKEEKAPRPQSSLT+VKHGEELPV+RNGLFKFDINLNENG APVVIGAREEVEV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGAPVVIGAREEVEV 180
Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 240
VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGGIVGDLRLGLCG
Sbjct: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 240
Query: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match:
A0A6J1EEG3 (probable F-box protein At5g04010 OS=Cucurbita moschata OX=3662 GN=LOC111432489 PE=4 SV=1)
HSP 1 Score: 412.9 bits (1060), Expect = 1.1e-111
Identity = 217/283 (76.68%), Postives = 237/283 (83.75%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQ L SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS++LWEPIF+A FPS
Sbjct: 1 MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAKFPS 60
Query: 61 LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
L NL AS+ T+SPPVSFRRLFGLG+ AAARRRPA KP LSLSDLVFVIS+S TDK
Sbjct: 61 LTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILSLSDLVFVISVSGTDKANGC 120
Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
I G KEEK P+ TVVKHG EL V+RN LFKFDIN++ NG VVIGA EEVEV
Sbjct: 121 IVSGGTKKEEK-DVPEPMFTVVKHGGELAVDRNRLFKFDINVS-NGDEVVVIGAGEEVEV 180
Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGGIV DL+LG+C
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240
Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
G GG ++KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Cmc08g0232981 vs. ExPASy TrEMBL
Match:
A0A6J1HMX9 (probable F-box protein At5g04010 OS=Cucurbita maxima OX=3661 GN=LOC111466077 PE=4 SV=1)
HSP 1 Score: 406.4 bits (1043), Expect = 1.0e-109
Identity = 212/283 (74.91%), Postives = 236/283 (83.39%), Query Frame = 0
Query: 1 MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
MAQ L SPPPWEV+LLVAERLDP+TLATASCVCKSWS+SMAS+HLWEPIF+A FPS
Sbjct: 1 MAQSLQP-PPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNHLWEPIFSAKFPS 60
Query: 61 LFNL-ASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSI 120
L NL AS+ T+SPP+SF RLFGLG+ AAARRRPA KP LSLSDL+FVIS+S TDK
Sbjct: 61 LTNLAASSATASPPLSFCRLFGLGHTAAARRRPAPSKPILSLSDLIFVISVSGTDKADGC 120
Query: 121 IACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEV 180
I G KEEK P+ T+VKHG EL V+RNGLFKFDIN+++ G VVIGA EVEV
Sbjct: 121 IVGGGATKEEK-DVPELMFTIVKHGGELVVDRNGLFKFDINVSK-GDEAVVIGAGGEVEV 180
Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLC- 240
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGGIV DL+LG+C
Sbjct: 181 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKLGVCK 240
Query: 241 -GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFN 281
G GG +++VRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLFN
Sbjct: 241 NGEGGKNDEVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Cmc08g0232981 vs. TAIR 10
Match:
AT5G04010.1 (F-box family protein )
HSP 1 Score: 107.1 bits (266), Expect = 2.4e-23
Identity = 81/273 (29.67%), Postives = 131/273 (47.99%), Query Frame = 0
Query: 11 SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
SPP WE++ LV +DP++LA ASCV +WS +S+ LW+ + A S+F A
Sbjct: 51 SPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSL-PATRHSIFAKAITKEG 110
Query: 71 SPP--VSFRRLFGLGYIAAARRRPAQ-LKPTLSLSDLVFVISISFTDKDQSIIACDGVNK 130
+ P +S++RL AA RRR Q +P +SLSDLVF++ +S K+
Sbjct: 111 AKPAWLSYKRLISEAESAAKRRRNNQPAEPKISLSDLVFIVHVSAGSKE----------- 170
Query: 131 EEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEG 190
VVK G++L N F+ + ++ ++G ++V + WN+VL
Sbjct: 171 ----------AVVVKQGKDLVFGSNERFQIEADVRDSG----FTADMKDVSMSWNVVLRN 230
Query: 191 WRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG--IVGDLRLGLCGNGGGSN 250
+ +F M E + GWF++ELP N G +VG+++ N
Sbjct: 231 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDGSNLVGEVKPSF-------N 285
Query: 251 KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
+ ++ V + +W+ + +DD L YLQ FL
Sbjct: 291 EDVLDKVVFAIADSRNWKSLFVDDVLRYLQCFL 285
BLAST of Cmc08g0232981 vs. TAIR 10
Match:
AT4G24210.1 (F-box family protein )
HSP 1 Score: 42.0 bits (97), Expect = 9.5e-04
Identity = 33/106 (31.13%), Postives = 48/106 (45.28%), Query Frame = 0
Query: 21 VAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTSSPPV-----S 80
V + +D KTLA +SCV K W + + LWE I T ++ N+ V
Sbjct: 43 VLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWT---NIGCGQNQLRSVVLALGG 102
Query: 81 FRRLFGLGYIAAARRRPA------QLKPTLSLSDLVFVISISFTDK 116
FRRL L ++ P +LK TLSL + + +SFT +
Sbjct: 103 FRRLHSLYLWPLSKPNPRARFGKDELKLTLSLLSIRYYEKMSFTKR 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008449214.1 | 4.8e-159 | 100.00 | PREDICTED: probable F-box protein At5g04010 [Cucumis melo] >KAA0047228.1 putativ... | [more] |
XP_031740421.1 | 1.8e-150 | 94.72 | probable F-box protein At5g04010 [Cucumis sativus] >KAE8649452.1 hypothetical pr... | [more] |
XP_038883618.1 | 1.5e-123 | 82.70 | probable F-box protein At5g04010 [Benincasa hispida] | [more] |
XP_022925168.1 | 2.2e-111 | 76.68 | probable F-box protein At5g04010 [Cucurbita moschata] | [more] |
XP_023518459.1 | 7.1e-110 | 75.97 | probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q5EAF6 | 3.4e-22 | 29.67 | Probable F-box protein At5g04010 OS=Arabidopsis thaliana OX=3702 GN=NSFBx PE=2 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DEJ6 | 2.3e-159 | 100.00 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... | [more] |
A0A1S3BLJ1 | 2.3e-159 | 100.00 | probable F-box protein At5g04010 OS=Cucumis melo OX=3656 GN=LOC103491161 PE=4 SV... | [more] |
A0A0A0LDE5 | 8.9e-151 | 94.72 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G497390 PE=4 ... | [more] |
A0A6J1EEG3 | 1.1e-111 | 76.68 | probable F-box protein At5g04010 OS=Cucurbita moschata OX=3662 GN=LOC111432489 P... | [more] |
A0A6J1HMX9 | 1.0e-109 | 74.91 | probable F-box protein At5g04010 OS=Cucurbita maxima OX=3661 GN=LOC111466077 PE=... | [more] |