Cmc08g0225141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag protease polyprotein
Location	CMiso1.1chr08: 15880138 .. 15900293 (+)
RNA-Seq Expression	Cmc08g0225141
Synteny	Cmc08g0225141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAAACTGAGATTGTAAAGGGCAAAAACGATGAAGAGTTGAGTTATTATTACAAATTGAACTCAAAATGTTCACGATTCAAATATGAACTTTTTATTACATTACATAACAAACTCAACACATTACACGTTACCAAACATTCCTTATATAAATAAGAAGTAAAAACCAAACTGAAATATTTTTTATGGGTAAAATAGGAAGAAAAAAAATAGATACAAAATTGTAATTGAAATAAAGAGAACAAAATTTCAAAAATCCTTTTTAATTTTCATCCTCCATCACACTCGTTTTCTGCTTAAAATTCTTAAGCAATTTGGGCCTAGGGTTCATGGGCTTCAAAAACCCAGCTTGTAACCTAACCATTTCCCTCAAGACCCCAATCAATTTCTCCTCAACCGCCGCCCCATCCAACTCCATCACTCTCAAACACCTCGCCACAGCCTCCATCGTACTAACACATCCGCCGTGCGGTTCCTTCCTCAGAATCAACTCCGAATCAAATATGCTTCCGCCTTCAACACTCTCATCGATGTCCAAACAAACTCTCCTCGCAAACCTTGACAGAAACTCCTCGCTCGATCGCACCATCTCCTTCGCGTGCTTCCACGTTCCGTCGAACGCTATCAGGACCAGATCTTCAGTTATGTTGAGATCCGAGATGTTGATCGGCGGCGAGGAGTGAGGTGTAGGCGGGAAAAGGAAGACTGCGGGAGGGGATTGGTCGAGGAGTTTGGAGAGACCGGGCTTGAGGCGGCGATTGACGATGGTTGTTGCGTTGAGGAGGCATTTCGTGAGGATTGGTGTAGTGGAGAGCTTGTGTTGTGATTCGTGAGGATGTTGTAGTATGATGATTTTTGTTTTTGTTGCGATTGGTGAAGATGGAAGGAATTTGCAGAGGCAGACTGGTTGGGGACGGTTGCAATTAGGGCAAATTGGCCGCCGAGGCGGCCGGGACGACGAGGAATATCCGGCGGCGAAGTTGTGGTTGTTTGTTGACTCCATGCCTCTGGAGAAAACGATACCGTTTTGATGTGTTGCTTCCTCGACTTTCGTTTTAGGGTAAGGCATGATAGCATCTTACCTTAGGGTGTTCGACGGTTGGGTTCATTTTTTTTAAACCGAAATTTTCAAAAAAAAAAAAAAAAGAGAAAATATAGTTAATATTTGAGGTGTTTTCAAAAGTATAACACAGAAAACAAAAAAATTCCACCTTGCAATAAAAAATACCTCTACGTCTAGCATTGGCTAGATTTGGTATTCTTATTATATTATCCTTAGATTTTTTAGATTTGTTTATTTATATTTAAATAACAATTATTTTTAGATTATTTTTTATATTTGATATTTGATTTAATATAAATCAAAATTTATGGTTGATTGAAAATAAATATCATAATTTTTAGAAAATATATAAAAGATTACAGAAGAGGAAAGAGAAATTGCAGAAAAAGAGAAGAAAGAAGATATAAAATGTGGTCAAAGTTAGAATATTTTTAAAATTATAATTGGCTTCATGTATTTTAACTACAGTAAATATTTTTGTGTTTTATATTATTATATTTATGAAAATTAACATGTGAAGATTTCTATTTTTTTTTTAATTTTCTTTAAATTTATGTAATTTTCTATTAAATGAAGGTGTGTCTAGGAGTTCTCTTCCCGAATTCATTTTGGGACACATGTTTCATAATATGGATATTTAATTTATAGGATTTGCGAAATCACTTGAATGTTGGATGTTGTTTCATGGGTATAATTCAATAATTTGTAAAAAATAAAATTAATTAATTACTTAACTAAAGAACGGAGATCAATTAAATCTAATGGGGTTTTCATAAAATATTTAACAATTTTGAAAACGAAAAAAGTCATACGTTCATGATTAGAAATACAAAAAATGCTCCAATTAACTATGCACAATCGTTCACAATGCTTGTGTAATATTCTTCTAAATGAGTGATCTAATATCATTTAGGTCATGATACTAGATTGTGTAGTTTTTTTTAACAATTGAAAAAAAATGCTTTAAATTCAAACGATTATGCACGATTGTGTATTTCTTTTAGCAATGAGAAAAAATATTTCAAATTTAAGCGATTGTATTGTCCATGTCAAACGATTGTGTTGACTATAACAAATGATCAACACAATCATGTTGATTATGAAAAACAATCGTGTTGATCATAGTAAGCAATCATATAATTCAATGTAAATAATCATTAAAAACTTCAAATAAGATGATCGTGTTTACCATGCTAAATAATCGTGTTAACTATGGTAAGTGATCGTTAAGACGATGGGGAAATAATTTCAAATTTAAAAGATTGTGTTGATCATGGTAAATGATCATATTAACAATGTTAAACGATCGTTTAGATCATGTCAAATGATATTTAAACGATTTTAATATTCTCGAATATGAGAAAGATGAGTAACTTCATAGATTTTTGTCGAAAATGGTGAAGATGTAATAAAAGATTTAAACTGAAGAATAAATCGTTTAAAAATAGAAAAGAGAAAATCTGAAAGAGAAGATGAAGAAATCTAGAAGAGAATATAGAGTAAATGTCACACCCCCTCCCGGACCACCTGCTACCTTAGACCGAAAGATGGCGTGAAGCCGACGAACAACGCTTTTCTGTACTTGTATCTGTCGACTCTGCTTAAAACTTTCATGTGATGAACTTGCCAATCTAGTATATAAACTATTGTACATGCCACAAAACACAGCGGATCCTAGGCTAGTCAAACACAGCTAGTCAAACACATACATGAAATGTACCTCAAAATTTACCGATTTCACGAGCAAACCTAAAGACACCCTAATTAAAATATAACCAACAAAATTTACACAACTACAGCTCCTAAAGCTTATACAAACTGTGGAGTATCTATAACATACAAGGGTGTGAATACATCACAACACAACAGACTTTATGCCCAACTCAAAACACGTACTGGCAATCGATAATGAAGCTTCCGCAGACTAAGGCAGTCTATCAGGCACCGGGAAGTCGATCTCTACCTGGAAAATGGGTAAAACATTTTGGAAAGGGTGAGCTATGAAGCTCAGTGAGTGACTCAGTTTAAAACTATGAATTTAAAGATAAGAGCACGTGAAAACTTTACACATATAAATCTATTTATACAAGTCGTAAATGTAAATGTGTAATAGTAAGAATAGCTTCCTTAAATACTCAGCAAGTTCATCATTGAAATCTAGCAAGGCATATCAAGTATATCGAAGCATTTTAACTAACATGACGAATCTACGTTGTGTAGGGTACACCTTGTACAACAACGTTTACAAGCACTACGATGTAGTGGGGTCCGCCCAGCACTCCCATCGTCTTTGTCGTAGTGGGGCCCGCCCAGCACTCACGACAGCATTGTTGTTACGGAGTACACTCAACGTCAACAACGAAATCTAACTAGTGTGCACACGGTAATCTCTAGCCTCAGGCTCAAGATCTCAGTCATGTAGTTAATGAAAATTTCATAAATCATCATAAAATATTAAAACATGCCTGCTTATAAATTTTACACAAAGCTCGAACTTTACTCAGCTCTTTCGTGGAAAATTGTAGTTCTTAAAACAAAACTTCATACTAATTCATACTTTGCTTAAAATATTGTGGTTTAAATACTTTCCAAACATTTAATATCTACGTGCTAGCGTAAATTTCTTTAAGAAATCTAGTCTCCAAATGTATACTTGAAAATAGTCATGAAATTCAAATACCTTTCATGGCTTCGTAAATAAACATTTATCGCATTCAATCATAATAACAGTTATGGAAAATATTTCAAAGTTGGTTTTGTCACTCACAGTCTTGGGCTAGATCCTTGGTCTATAAGCTCGGTTTAATTCTTCTCGGCCTGCCAACAACCCAACCGAGTATTAAAACCCTAAACATTCTGTTTTCCTAAAGATATACATAACATGTCGCACCAAAGATGACGCTCACGAAAACAAAGCTTAAGAAATAAAATCCTATTTCAACAATTCTCTAAAATTTCCAGATTTCTAACATAAACTTCAGAGAACTATAACTTTCTCAATACTTAACCAAAATGAGTGTTCTTTATATCAAACTCTTCGTTTTGAGATCCTCTAAAACTTACCTGAAGACATATAAATCTGATTCCCCGTGCATAAACACATATAACCCTCAAAACAGAACCACTTCCAGAATCGCGCGCACACGACCTCTTTAACTTGTTCCTACGATTTAACCAATTTTTAGTCGTTTTTGTTTACAATTTCTTCATGAAAGTTGTAGTAAATTGAATAAGCTTTCCAACCATACCAAATAGAAATTCTGTAACGACCCAACTTTTCCGGACTAAGCTGAGGTCACTACCAAATACCAAAACTCGACCACTCAACTTAAAAGTTTAAAACGGACCAGATACGATTCATTAAAACGTTATAAACCTTACAAAAGACAGTTTTGGGCCCTATTTTAAATAATTCAAAAAAAAAATATCACAAAATAAAATATCAAGTCACCAGTCCAAAATCACAGTCAAAATATTCTGACAAAATACATAGCGGAAGCGAAAAGAAAACCAGACGCGTCCATATGGCCTTCACGCACCCTTCCTGCCTCTCGTCGGTCTGCCCCTCGCTGTACCCCTACCTGAAAAGTTAAAGAAAAGAAAGGGTGAGTATAAACATACCCAGTAAGGGACCCACTACTGGGCCCGTTAGGGAACAACAGTTAACTTCCTATTCGGGGGTACCCTACATAACAGTCTAGTGGTTCCGTAGAACGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACGTATCCGTAAGGTACACTACCCCATAGATGAAGCTAACCGTTACCCCTCAGCCCTTACCAAACTGTCTACATCAGTCACATCTCAACGGCATTCATATTACAGTCCCGCCATAGGCTTTGTCAGTCAGATAGTATAGGTTTAAACATCTACACCCTCAGTTGCTATATGCATTACCGATTCGTACACCAATAGGGAAACCCTAGGTCCAATCGACTAACCAACCAAAACCGGACTCACTGTCCTTCCCCGTCCAAACTCCATGAACCACATCCAGACCAGTGTTTAATACATACTAAACCGTAACTTTAAGGTCCATCAACATATAATTTCAATCCACAAACAGCAGTCACAGTATATTTTCATCAGACAGAATATAATATCAGTACTTAACAGTCAACACGCATGCAGATATTCAGTACAGTCACTAACGTGTAATCCCCTGTGGATTACTACGGTTTTAGCCTGGACTCGGGGTCCAGTAGTAGGGAAACCCTTACCTGAAACTCGGTTATGCCCCTCGATCGAAATCCACGCTCAACAGATCCACCTAACGAAACACGAGGTTTTAGTTGATGACTTTAGTAGCAGTTGTTTTAAAAAGGTCAGAAGCGATATCCGTTGACTTACCCAAGGAAAGGAATCTATCTCTAACCAGGCCTGCCGCGGAACCCGAGAACTTAAGCGTCAACTCTGCACTACCTTCAAGGGAGAAAAGTAGGGCCATATCTTAAATCAACATTCAAACTCAAATCGGACGAGGTAACATTAGGGAATTCATCAGAACAATCCTTACCGAAAACTCACCGTGAACCGAAATGAAGGAAGGAAGGCTTAGGTGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTTGGTTCTCGGCTCGGCTCGGCTTAACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCGCGGCTCGGCTCGCGGCTCGCTCGGCTTAGGGCTCGGCTCGGACAAGGATGGCGGCTCGGGTACGGCTCGCGGCTCGGCTTGTCCAACACGGCTCACCCGGATCTGTGTGGCTCGGATCGGAAACGGCTCGGGTCAGTTGGAACCGGGTCGGGTCTGGACGAAAGAAAATGGGCAGCACGGTGATCGATTTTTCCCCCGGCGAGCGACGGCGGCGGCGATTCGCGGACGACACACGAGGGATGCGGGTGGTTGCTTCGTGGTGCGGCGACGAGCGGCGGTGGCGTTGTTGTGTGAGGCCGAGAAGGAATCGGAAATGGATGGCTACGGCGGACGGCTCCGACGACGTGGACAGAGACGGAAACGCGCTCGACGGAAGGAAAAGAAGAGAAACCGGGCGGCGCACGACGGAAAGGAGAGAGAGAGAGAGAGATGACGGCGGCGGCTTTGTGAACGTTGAAGACGAAGAAGAGAACGAAGGAGAAGAAGAAGGTGCGGCGGCTGGGCTGAGGGTGTGCGTTCGCGCGTTAGGGTTTCTGAAAAAAAAAAATATTTTATTTTATATACATATATATATATATATATATATATATACAGAAATATTAAATTAAATTATAATTATAATAATAATATTTAATAATAACAATAATATTAATAATAATATTAATTAATAAAAATGAATTAATAATATTTAATAATAATAATAATATTAGTAATAATATTAATTAATAATAATGAATTAATAATATTAAATAATAATAATAATAATATTAAGTAATAGTAATAATAACAATAATATTTTAATCATAATAAATAATATTAATAATATAGTTAATACAATATTATTATTATAGCAATTAACAAAACATTAAGTTTTTTTTAAAAAAATTTCGTATCCCCACGAAAGATAAAATTTACCTCGAAAAGATTCGGGACGTTACAAATTCTAACTCCACCGATACACTCTGAAATACAAGAAAAACCAGAGACCTCCTGATTTCGAGTGAAAACCAACTGCCCTGTTTTCTTCATCAAAAAGCACCAAATGAAAATCCGAATTTGCTCCAACGTTCTTCATAAAGTTTGTTTAAAAATGAGTTAACTTTCAGTAAATGTAAATCTCACCTCTTAATTCCTTTTGAAGAGTTCAAACCGAATTAAAAACCAGTGATGTGCAGAATGAACTAAAATTCAGCCATTGATACACTTTGCTTGAGTTCTCCTCCTCTTCTTCAACCTAAAAATTCTAGTAAAATTTCTCTTCTTCTTCCAAACTCTCTCTTAGAAGTTCTCTGCAAATTGAAGAAGGAAAAAGAAAAAAAAAAATAAATAAAGGAAACTTGGATGTCTTCAAACTTGGCGGTGAAGGGAAGAGAAGAAGAAGAAGAAAAGAGAAAATGAAATTTTCTTCTCCTTTTCTTCTTTTTGTCCTTTCTTTTCTTTAATTAATTTAATAAAACTATTTAATATATAAATATATATATTTATATTTACACTTAATTTCCATTTTCTTTTTCTTTTGTTTTTCCACAATTAAAGAAATTAAACCAAGAAAATATCAGGTTTACAACTTACCTTCCCTTTAGAAAATTTCGTCCTCGAAATTTAGAATGTCCTTAACTGAAAAGTATCGGAGAGCTCTTCTTCATCTGATATTCTGGTTCCCAAGTTGCCTCCTCCGCTCCATGATGTCTCCACAAAACTTTTATGAGTGGAATCGTTTTGTTTCTCAAAACTTGTTCCTTTCTGTCGAGAATCTGAACTGGTTCTTCAACATAACTCAAATCTTCTTTTAATTCAACTGGTTGATCTTGCAAAACATGCGATGGATCTGGTATATATTTTCTTAACATGGATACATGGAAAACATCATGTATTCGTGCAAGTTCTATTGGCAACTCAAGTCTATACGCTGCTGGTCCCACTCGTTCCGTTATCTGATATGGCCCAATATATCTAGGACATAACTTACCTTTTCTTCCGAAACGAATAACACCTCGCCATGGAGATAATTTCAAGAAAACTTGATCTCCAACTTGGAATTCTAGGTTTCTTCGTCGCTTATCCGCATAACTTTTCTGTCGATCTTGGGCTTTCCTCAGATTTTCTCTGATCAACTTAATATTGTTTGTCGTAATCTGAACCAACTCAGGACCTACTAACTTCCGCTCTCCCACTTCATTCCAGCACACAGGAGTTCTGCATGGTCTCCCGTATAAGGCTTCATATGGTGCCATACCGATACTAGACTGATAGTTATTATTATAAGCAAACTTCATAAGTGGCAAGTGGGTATCCCAACTTCCTTTAAGTTGTAGGACACATGCTCTCAACATGTCCTCTAAAGTTTGGATGGTCCTCTCGGACTGACCATCTGTTTGGGGATGAAATGATGTACTAAACTTTAGCCCTGTTCCCATTGCTTTCTGTAAACTAGGCCAAAATTTAGAAGTAAACCTCAGATCCCTATCTGAAACTATGGACACTGGTACTCCATACTGACTCACAATCTTATCAACATATAATCTCGCTAGCTGGTCTAACGTAGATGTCATTTTAATCGGTATAAATCGTGTCGTCTTGGTGAGTCTGTCTACTATTACCCATATACCATCATGTCCACTGGATGTACGAGGTAATCCAAATAGAAAATCCATAGTAATATGCTCCTCAGCTCATAATCATTCTACATATTAAATACATCTTTGTACCTTTCCTCAGCTCAAGCGTTTACCACGCTCTTTTGCCAAGTTGTAACTATGTGGAGTAGTCTTAATTTAAGAAAGTCACTCACGCAGAAGTACATAATTTAAGAAAGTCACTCACGTGAGAGTGTGGAGTTAAGAAAGTCACTCACGCCAGCTTCCGATCCTTTCTTCCCTGAATGCCTCTTCTTGCCTAGAGTTCTCTAGGTAGCAACTCTACTCTCTGCATTCTTTTAACAAAACTTCTAAAATGCTAGCACTTTTCTTAAGGTTTTTAACCCTATTTATACTAATCTTTTAGACCTGTTACTTTCTTTACTTGCCAGTTTAGAATTATAACTTTACACGTGTTGTTCTACCGCTTCGCCGCACTATGCAGCAAAACCAAACCCTACATGTAAACCAACGATCAACTTCCGATTTGACATTTCCTCGATACGTAAACCTTATCATCTAGAGAAGCTAATCTCTTATCACCTTATCCTTTCGGGAAGCTAAACTCCTTTTTCCTGCCATCACCTTATCTAACTTCTCCTCGCATTACTTTGGTAATTGCCTAACTCTTCTTGTGATAGGACTCCTTCGTCAATGCCTCTCTTCTTCAACAAGATTCCTTTTCTCGGCTCTGAGCCTCACATCTTTGCATACTCTTTAGCCGCGAACCCCCTTGCACTTCCTTGTAATACTTGACGGATTCAAGCTTCTAAAAATCTCTAGAAATTTTGGAAATTCTCTCAATTCTTTCTTAAATGAGCATAAGGTAAAAGCAGCTTCACAATTCTCAAACTTCACCTATTTATAAGCCTTTCCAGTGACATTTTCTATGCAGAGTTGATGACTTCTTCCGAGCGATGGGAGTTAGCAAATACCAGAATGCCACATATTACTACCATCTTCTTATCCTAAATTCAATTGGACGACAATGTCAAATCAATTCATCGGCCTTTCTACACAAGAATTACGTCAACTACTACATGGTGAAGTAAGCTCATAGCGTGACAAAGATTTTCGCATAGTCTTTTCTCATCGCATAATAGTTTCTATCGCATAGTGTAACGCCCCGACGTTCGAGGTAAAATTTTAGCATTTTTAAGTAAATTGTTCGAAAATTTGAGTTTTGGTAAAACGGTAAAATAATAATATAATATTGATTATATTATCATTATCGGGAATTATTATTATTATTTTAATGTTAATTTTTTTTCTCTTTTATTTTATTTAAAATAAATATTAATATTCTTATTTAATATTAATATAATAATATATATTAATATTCCATTATAAATTTATATTAATTTTATTCTATATATATATATATATATCATTATTATTTTTATTTTTATTATAATTAAGATTATTATTATTATTATTATTATTAGTTATTTTTATTACATATATATATATTATTATTTATATATGTATATATATATATATATATATATATATATATATATATATATATATATATATTTATTACAAAAAAAAAAAGAAAAACCCTAAGTTCGCGCCGCTACCCCCCCCCCTCGAATTTTTCTTCTCCCTTCCGTTTCCTCCTTCCACGCCGCGCCACCGCCCCGGGTTCCCTTCTCTTTTTCCTTTCCGACGGCCTCTCTCCCTCCATTTCTTTTCCGTCTCTGCCTCGCCACCATCACCATCATCCCTCCTTCTTGTTCTTCTCCTTCTCCCTCTTCTTTACAGCCCCCACCGACGACAGCAGACGTCCGTCCGCCGCGGCCTCCATCCGTTTTCGCTTCGCCCCCAACCGCCGGCAGCAGATAACTCTCTCTCTCTTCGTTTCTATCACGGCTGGCTTACTCTCCGTCACCAGCTCGTGTCTCCGACGCCGACAGAGCACGGAGGAAGCGCCGTCGTTCGCCGGAAGGAAGAAGCCCCAGAACGTGCTGCCGTTTTTCGTCCAACCCGACCCGGTTCCAAGCTGACCCGAACCCGTTTCCGGTCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAACCAAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAACCAAGCCGAGCCGAGCCGAGCCAAGCCACCTAAGCCTTCCTTCCTTCATTTCGGTTCACGGTGAGTCTTCGGTAAGGATTGTTCTGATAAATTCCTTAATGTTACCTCGTCCGGTTCGAGTTTGAATGTTGGATTAAGATATGGCCCTACTTTTCTCCCTTGAAGGTAGTGCAGAGTTGACGCTTAAGTTCTCGGGTTCCGCGGCAGACCTGGTTGGAGTAGCTTCTTTTCCTTGGGTAAGTCAGCGGATGACCTTTTAAAACAACTGCTACTAAAATCATCAACTAAAACTTTCGTGTTTCGTTAGGTAGATCTGTCGAGCGTGGTTTTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGTTAAAACCGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTACTGAATATCTGTATGCGTGTTGACTGTTAAGTACTGACATTATATTTTGTCTGATGAAAATATACTGTGACTGCTATTTGTGGATTGAAATCATATGTTGATGGATCTTAAAGTTACGATTTAGTATGTAGTAAAGCACTGGTCTGGATGTGGTTCATGGAATTTGGATGGGGAAGAACAGTGAGTCCGGTTTTGGTTGGTTAGTCGATTGGACCTAGGGTTTCCCTATTGGTGTGCGAAACGGTAATGCATATAACAACTGAGGGTGTAGATGTTTAAACCTATACTATCTGACTGACAAAGCCTATGGCGGGACTGTGATATGAATGCCGTTGGGATGTAGCTGATGTAGACAGTTTAATTTGGACTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATATGTGCGTCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACGGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACCGATATGTGCATCCTTCGGGAGCACTAGACCGATATGTGCATCCTTCGGGAGCACTAGACCGATATGTGCGTCCTTCGGGAGCACTAGACTGATATGTGCGTTCTACGGAACCACTAGACTGTTATGTAGGGTACCCCCGAATAGGAAGTTAACTGTTGTTCCTTAATGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTCTCTTCTTTAACTTTTCAGGTAGGGGTACTGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGATTGTGATTTTTGGACTGGTGACTTGACATTTTATCTTGTGACTTTTGAATTATTTAAAATAGGGCCCGAAACTGTCTTTTGTAAGGTTTATACTGTTTTAATGAATCGTATCTGGTCCGTTTTAAATTTTACGTTGAATGGTCGAGTTTTGGTATTTGGTAGTGATCTCAGCTTAGTCCGGAAAAGTTGGGTCGTTACAGTTGGTATCAGAGCGTAAGTTTTAGGTTCTGTAGACTGACTTATAATGTGAGTCTGTGTTTTGTGTCCTTATGGCTGAAACGATCCTTGCCGCTCGTCAGGTACGCTCTCATGAAAGTATATGTATAACTCTACATGCATTACCTTACCTAAGTTAAACTGCAAATTCAATTACCATTTATGACTAAAAGAATCGTTTGGTGGTTGTTAGGAAAATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCGGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATCGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGTACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAACATCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCATCCTTGGAAACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGTTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAATTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAAACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGATGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCAGTTGTGGGAAGCACCATTTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCTGAGAAGGCAGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGATAGTCCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCGGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCGGGGTTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCTTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTGTTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGGTACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTTCTAGACACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGATGGAGGCCGAACACGAGGAGCATTTACGCATGGTTTTGCAAACACTTCGGGATAATAAATTATACGCAAAGTTCTCGAAGTGTGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACTGGTTGGACCCGACCTTCCACAGTCAATGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCTAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAACCGACTTTGAGGCAGAGGATCATTGATGCTCAGAATCACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAGACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGATTAAGGCAGAATTATTAACTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAAGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCATTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAAAGATTGATGGGTCCTGAGTTAGTCCAGTCTACTAACGAAGCTATACAGAAGATTAGATCACGCATGCATACCGCACAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATAATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCACGTAGTGGATTACGAGCCACTAGAGATTGATGAGAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAAGAAATTCCCCTGGTTAAAGTCTTGTGGCGGAATCATCGGGTAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGATCTCGTTATCCCGAGCTGTTCGAGGAATAAAACTTTCGAGGACGAAAGTTCCCTAAGGAGGGAAGAATGTAACGCCCCGACGTTCGAGGTAAAATTTTAGCATTTTTAAGTAAATTGTTCGGAAATTTGAGTTTTGGTAAAACGGTAAAATAATAATATAATATTGATTATATTATCATTATCGGGAATTATTATTATTATTTTAATGTTAATTTTTTTTTCTCTTTTATTTTATTTAAAATAAATATTAATATTCTTATTTAATATTAATATAATAATATATATTAATATTCCATTATAAATTTATATTAATTTTATTCTATATATATATATATATATCATTATTATTTTTATTTTTATTATAATTAAGATTATTATTATTATTATTATTATTAGTTATTTTTATTACATATATATATATTATTATTTATATATGTATATATATATATATATATATTTATTACAAAAAAAAAAAGAAAAACCCTAAGTTCGCGCCGCTACCCCCCCCTCGAATTTTTCTTCTCCCTTCCGTTTCCTCCTTCCACGCCGCGCCACCGCCCCGGTTCCCTTCTCTTTTTCCTTTCCGACGGCCTCTCTCCCTCCATTTCTTTTCCGTCTCTGCCTCGCCACCATCACCATCATCCCTCCTTCTTGTTCTTCTCCTTCTCCCTCTTCTTTACAGCCCCCATCGACGACAGCAGACGTCCGTCCGCCGCGGCCTCCATCCGTTTTCGCTTCGCCCCCAACCGCCGGCAGCAGATAACTCTCTCTCTCTTCGTTTCTATCACGGCCGGCTTACTCTCCGTCACCAGCTCGTGTCTCCGACGCCGACAGAGCACGGAGGAAGCGCCGTCGTTCGCCGGAAGGAAGAAGCCCCAGAACGTGCTGCCGTTTTTCGTCCAACCCGACCCGGTTCCAAGCTGACCCGAACCCGTTTCCGGTCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAACCAAGCCGAGCCGAGCCGAGCCGCGCCGAGCCGAGCCGAGCCACCTAAGCCTTCCTTCCTTCATTTCGGTTCACGGTGAGTCTTCGGTAAGGATTGTTCTGATAAATTCCTTAATGTTACCTCGTCCGGTTCGAGTTTGAATGTTGGATTAAGATATGGCCCTACTTTTCTCCCTTGAAGGTAGTGCAGAGTTGACGCTTAAGTTCTCGGGTTCCGCGGCAGACCTGGTTGGAGTAGCTTCTTTTCCTTGGGTAAGTCAGCGGATGACCTTTTAAAACAACTGCTACTAAAATCATCAACTAAAACTTTCGTGTTTCGTTAGGTAGATCTGTCGAGCGTGGTTTTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGTTAAAACCGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTACTGAATATCTGTATGCGTGTTGACTGTTAAGTACTGACATTATATTTTGTCTGATGAAAATATACTGTGACTGCTATTTGTGGATTGAAATCATATGTTGATGGACCTTAAAGTTACGATTTAGTATGTAGTAAAGCACTGGTCTGGATGTGGTTCATGGAATTTGGATGGGGAAGAACAGTGAGTCCGGTTTTGGTTGGTTAGTCGATTGGACCTAGGGTTTCCCTATTGGTGTGCGAATCGGTAATGCATATAACAACTGAGGGTGTAGATGTTTAAACCTATACTATCTGACTGACAAAGCCTATGGCGGGACTGTGATATGAATGCCGTTGGGATGTAGCTGATGTAGACAGTTTAATTTGGACTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATATGTGCGTCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACGGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACCGATATGTGCATCCTTCGGGAGCACTAGACCGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCGTTCTACGGAACCACTAGACTGTTATGTAGGGTACCCCCGAATAGGAAGTTAACTGTTGTTCCCTAATGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTCTCTTCTTTAACTTTTCAGGTAGGGGTACTGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGATTGTGATTTTTGGACTGGTGACTTGACATTTTATCTTGTGACTTTTGAATTATTTAAAATAGGGCCCGAAACTGTCTTTTGTAAGGTTTATATTGTTTTAATGAATCGTATCTGGTCCGTTTTAAATTTTACGTTGAATGGTCGAGTTTTGGTATTTGGTAGTGATCTCAGCTTAGTCCGAAAAAGTTGGGTCGTTACACATAGGCTATCCCCATCGCATGGGATCTTATTACGTAAAGGTAGATCGTAATTAGAGTTTCATAACTACTACCTCCTTATTGGAATTTTGCCATTGAAATTCAGTAAGTCTTATTTGAAAAGTTGTTGGTATTTAGCCTTCATTAGCTCTTCATTTTCCTAATGGACTTCTTCGACGCCATGGTTGCTCCATGAAATCTTAACCATGTGAATCACTTTTATCCTCAATACTTGCTTTTTTCTGTCCAACATGTGCAAAGACCTTTCTTTGTAAGTCAAGTTCTCTTGCACTTCTAAGGGTTGTTCTTGGAGGATATGTGAAGGATCTGGTACCTATTTTCTTAACATGGAAACATGGAAGACATTATGAATCCTACACAATTTTGCGGGCAGTTTTAGTTCATAAGCCATTTGTCCTACGAGTGTTAGAATTTCATAAGGTTCTATATGTCGTGGGCTTAACTTCATTTTTCTCCTAAATCGGATCACACCCTTCCATGGTGAAACTCTCAAGAAAACTTTGTCTCCAACATTGAATT

mRNA sequence

TCGAAACTGAGATTGTAAAGGGCAAAAACGATGAAGAGTTGAGTTATTATTACAAATTGAACTCAAAATGTTCACGATTCAAATATGAACTTTTTATTACATTACATAACAAACTCAACACATTACACGTTACCAAACATTCCTTATATAAATAAGAAGTAAAAACCAAACTGAAATATTTTTTATGGGTAAAATAGGAAGAAAAAAAATAGATACAAAATTGTAATTGAAATAAAGAGAACAAAATTTCAAAAATCCTTTTTAATTTTCATCCTCCATCACACTCGTTTTCTGCTTAAAATTCTTAAGCAATTTGGGCCTAGGGTTCATGGGCTTCAAAAACCCAGCTTGTAACCTAACCATTTCCCTCAAGACCCCAATCAATTTCTCCTCAACCGCCGCCCCATCCAACTCCATCACTCTCAAACACCTCGCCACAGCCTCCATCGTACTAACACATCCGCCGTGCGGTTCCTTCCTCAGAATCAACTCCGAATCAAATATGCTTCCGCCTTCAACACTCTCATCGATGTCCAAACAAACTCTCCTCGCAAACCTTGACAGAAACTCCTCGCTCGATCGCACCATCTCCTTCGCGTGCTTCCACGTTCCGTCGAACGCTATCAGGACCAGATCTTCAGTTATGTTGAGATCCGAGATGTTGATCGGCGGCGAGGAGTGAGGTGTAGGCGGGAAAAGGAAGACTGCGGGAGGGGATTGGTCGAGGAGTTTGGAGAGACCGGGCTTGAGGCGGCGATTGACGATGGTTGTTGCGTTGAGGAGGCATTTCGTGAGGATTGGTGTAGTGGAGAGCTTGTGTTGTGATTCGTGAGGATGTTGTAGTATGATGATTTTTGTTTTTGTTGCGATTGGTGAAGATGGAAGGAATTTGCAGAGGCAGACTGGTTGGGGACGGTTGCAATTAGGGCAAATTGGCCGCCGAGGCGGCCGGGACGACGAGGAATATCCGGCGGCGAAGTTGTGGTTGTTTGTTGACTCCATGCCTCTGGAGAAAACGATACCGTTTTGATGTGTTGCTTCCTCGACTTTCGTTTTAGGGAAAATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCGGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATCGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGTACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAACATCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCATCCTTGGAAACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGTTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAATTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAAACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGATGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCAGTTGTGGGAAGCACCATTTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCTGAGAAGGCAGGCACAGTAGTGACAGGGGTACTGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGATTGTGATTTTTGGACTGGTGACTTGACATTTTATCTTGTGACTTTTGAATTATTTAAAATAGGGCCCGAAACTGTCTTTTGTAAGGTTTATATTGTTTTAATGAATCGTATCTGGTCCGTTTTAAATTTTACGTTGAATGGTCGAGTTTTGGTATTTGGTAGTGATCTCAGCTTAGTCCGAAAAAGTTGGGTCGTTACACATAGGCTATCCCCATCGCATGGGATCTTATTACGTAAAGGTAGATCGTAATTAGAGTTTCATAACTACTACCTCCTTATTGGAATTTTGCCATTGAAATTCAGTAAGTCTTATTTGAAAAGTTGTTGGTATTTAGCCTTCATTAGCTCTTCATTTTCCTAATGGACTTCTTCGACGCCATGGTTGCTCCATGAAATCTTAACCATGTGAATCACTTTTATCCTCAATACTTGCTTTTTTCTGTCCAACATGTGCAAAGACCTTTCTTTGTAAGTCAAGTTCTCTTGCACTTCTAAGGGTTGTTCTTGGAGGATATGTGAAGGATCTGGTACCTATTTTCTTAACATGGAAACATGGAAGACATTATGAATCCTACACAATTTTGCGGGCAGTTTTAGTTCATAAGCCATTTGTCCTACGAGTGTTAGAATTTCATAAGGTTCTATATGTCGTGGGCTTAACTTCATTTTTCTCCTAAATCGGATCACACCCTTCCATGGTGAAACTCTCAAGAAAACTTTGTCTCCAACATTGAATT

Coding sequence (CDS)

ATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCGGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATCGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGTACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAACATCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCATCCTTGGAAACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGTTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAATTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAAACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGATGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCAGTTGTGGGAAGCACCATTTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCTGAGAAGGCAGGCACAGTAGTGACAGGGGTACTGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGATTGTGATTTTTGGACTGGTGACTTGACATTTTATCTTGTGACTTTTGAATTATTTAAAATAGGGCCCGAAACTGTCTTTTGTAAGGTTTATATTGTTTTAATGAATCGTATCTGGTCCGTTTTAAATTTTACGTTGAATGGTCGAGTTTTGGTATTTGGTAGTGATCTCAGCTTAGTCCGAAAAAGTTGGGTCGTTACACATAGGCTATCCCCATCGCATGGGATCTTATTACGTAAAGGTAGATCGTAA

Protein sequence

MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMREQQKPASPTPAPAPVPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVLRGADRREAGRMREGHMDASDFLSLPLCILSEYFDCDFWTGDLTFYLVTFELFKIGPETVFCKVYIVLMNRIWSVLNFTLNGRVLVFGSDLSLVRKSWVVTHRLSPSHGILLRKGRS

Homology

[Close]

BLAST of Cmc08g0225141 vs. NCBI nr
Match: ADN33767.1 (gag protease polyprotein, partial [Cucumis melo subsp. melo])

HSP 1 Score: 778.5 bits (2009), Expect = 3.6e-221
Identity = 394/401 (98.25%), Postives = 396/401 (98.75%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 231 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 290

Query: 61  QQKPASPTPAPAPVPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120
           QQKPASPTPAPAP PVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP
Sbjct: 291 QQKPASPTPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 350

Query: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180
           TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK
Sbjct: 351 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 410

Query: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240
           ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR
Sbjct: 411 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 470

Query: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 300
           GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP
Sbjct: 471 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 530

Query: 301 QRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGHTADR 360
           QRNFRPG EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGHTADR
Sbjct: 531 QRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 590

Query: 361 CPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           CPLR TGIAQNQGAGAP QGRVFATNRTEAEKAGTVVTG L
Sbjct: 591 CPLRPTGIAQNQGAGAPLQGRVFATNRTEAEKAGTVVTGTL 631

[Close]

BLAST of Cmc08g0225141 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 778.1 bits (2008), Expect = 4.8e-221
Identity = 395/405 (97.53%), Postives = 398/405 (98.27%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 228 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 287

Query: 61  QQKPASPT----PAPAPVPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPT    PAPAP PVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 288 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 347

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 348 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 407

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 408 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 467

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 468 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 527

Query: 301 VPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRPG EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 528 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 587

Query: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           TADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 588 TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTL 632

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BLAST of Cmc08g0225141 vs. NCBI nr
Match: KAA0054678.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 772.7 bits (1994), Expect = 2.0e-219
Identity = 394/405 (97.28%), Postives = 397/405 (98.02%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPT----PAPAPVPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPT    PAPAP PVPAPAPAPVPVAPQF+PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA WETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTARWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRPG EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTL 405

[Close]

BLAST of Cmc08g0225141 vs. NCBI nr
Match: KAA0053290.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 769.2 bits (1985), Expect = 2.2e-218
Identity = 391/405 (96.54%), Postives = 393/405 (97.04%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEV PVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVHPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPVP----VPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAP P    VPAPAPAPVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPARVPAPAPAPVPVAPQLVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR STSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRDSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRPG EFRSFQQKPFE GEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFETGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           TADRCPLRVTGIAQNQGAG PHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 361 TADRCPLRVTGIAQNQGAGVPHQGRVFATNRTEAEKAGTVVTGTL 405

[Close]

BLAST of Cmc08g0225141 vs. NCBI nr
Match: KAA0036197.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 768.5 bits (1983), Expect = 3.8e-218
Identity = 392/409 (95.84%), Postives = 395/409 (96.58%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPVP--------VPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTT 120
           QQKPAS TPAPAP P        VPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTT
Sbjct: 61  QQKPASRTPAPAPAPAPAPAPALVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTT 120

Query: 121 FDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVS 180
           FDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVS
Sbjct: 121 FDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVS 180

Query: 181 QITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEA 240
           QITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEA
Sbjct: 181 QITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEA 240

Query: 241 ARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA 300
           ARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Sbjct: 241 ARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA 300

Query: 301 EQQPVPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCR 360
           EQQPVPVPQRNFRP  EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCR
Sbjct: 301 EQQPVPVPQRNFRPDGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCR 360

Query: 361 QEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           QEGHTADRCPLR+TGIA NQGAGAPHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 361 QEGHTADRCPLRLTGIAHNQGAGAPHQGRVFATNRTEAEKAGTVVTGTL 409

[Close]

BLAST of Cmc08g0225141 vs. ExPASy TrEMBL
Match: E5GBB7 (Gag protease polyprotein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.8e-221
Identity = 394/401 (98.25%), Postives = 396/401 (98.75%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 231 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 290

Query: 61  QQKPASPTPAPAPVPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120
           QQKPASPTPAPAP PVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP
Sbjct: 291 QQKPASPTPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 350

Query: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180
           TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK
Sbjct: 351 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 410

Query: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240
           ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR
Sbjct: 411 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 470

Query: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 300
           GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP
Sbjct: 471 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 530

Query: 301 QRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGHTADR 360
           QRNFRPG EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGHTADR
Sbjct: 531 QRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 590

Query: 361 CPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           CPLR TGIAQNQGAGAP QGRVFATNRTEAEKAGTVVTG L
Sbjct: 591 CPLRPTGIAQNQGAGAPLQGRVFATNRTEAEKAGTVVTGTL 631

[Close]

BLAST of Cmc08g0225141 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 2.3e-221
Identity = 395/405 (97.53%), Postives = 398/405 (98.27%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 228 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 287

Query: 61  QQKPASPT----PAPAPVPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPT    PAPAP PVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 288 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 347

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 348 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 407

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 408 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 467

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 468 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 527

Query: 301 VPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRPG EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 528 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 587

Query: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           TADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 588 TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTL 632

[Close]

BLAST of Cmc08g0225141 vs. ExPASy TrEMBL
Match: A0A5A7UI54 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004990 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 9.7e-220
Identity = 394/405 (97.28%), Postives = 397/405 (98.02%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPT----PAPAPVPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPT    PAPAP PVPAPAPAPVPVAPQF+PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA WETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTARWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRPG EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTL 405

[Close]

BLAST of Cmc08g0225141 vs. ExPASy TrEMBL
Match: A0A5A7UDK9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001010 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 1.1e-218
Identity = 391/405 (96.54%), Postives = 393/405 (97.04%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEV PVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVHPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPVP----VPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAP P    VPAPAPAPVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPARVPAPAPAPVPVAPQLVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR STSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRDSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRPG EFRSFQQKPFE GEAARGKPLCT+CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFETGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           TADRCPLRVTGIAQNQGAG PHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 361 TADRCPLRVTGIAQNQGAGVPHQGRVFATNRTEAEKAGTVVTGTL 405

[Close]

BLAST of Cmc08g0225141 vs. ExPASy TrEMBL
Match: A0A5A7T3M7 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00720 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.8e-218
Identity = 392/409 (95.84%), Postives = 395/409 (96.58%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAIEQRFRDMIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAA+EQRFRDMIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPVP--------VPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTT 120
           QQKPAS TPAPAP P        VPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTT
Sbjct: 61  QQKPASRTPAPAPAPAPAPAPALVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTT 120

Query: 121 FDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVS 180
           FDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVS
Sbjct: 121 FDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVS 180

Query: 181 QITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEA 240
           QITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEA
Sbjct: 181 QITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEA 240

Query: 241 ARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA 300
           ARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Sbjct: 241 ARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA 300

Query: 301 EQQPVPVPQRNFRPGDEFRSFQQKPFEAGEAARGKPLCTSCGKHHLGRCLFGTRTCFKCR 360
           EQQPVPVPQRNFRP  EFRSFQQKPFEAGEAARGKPLCT+CGKHHLGRCLFGTRTCFKCR
Sbjct: 301 EQQPVPVPQRNFRPDGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCR 360

Query: 361 QEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGVL 402
           QEGHTADRCPLR+TGIA NQGAGAPHQGRVFATNRTEAEKAGTVVTG L
Sbjct: 361 QEGHTADRCPLRLTGIAHNQGAGAPHQGRVFATNRTEAEKAGTVVTGTL 409

The following BLAST results are available for this feature:

BLAST of Cmc08g0225141 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33767.1	3.6e-221	98.25	gag protease polyprotein, partial [Cucumis melo subsp. melo]	[more]
TYK01613.1	4.8e-221	97.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0054678.1	2.0e-219	97.28	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0053290.1	2.2e-218	96.54	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0036197.1	3.8e-218	95.84	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0225141 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc08g0225141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBB7	1.8e-221	98.25	Gag protease polyprotein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 S...	[more]
A0A5D3BPI1	2.3e-221	97.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7UI54	9.7e-220	97.28	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7UDK9	1.1e-218	96.54	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7T3M7	1.8e-218	95.84	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Cmc08g0225141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 147..243 e-value: 8.4E-16 score: 58.0
None	No IPR available	GENE3D	4.10.60.10		coord: 274..368 e-value: 2.3E-5 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..81
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 120..364
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 120..364
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 348..362 score: 9.438442
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 344..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225141.1	Cmc08g0225141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding