Cmc07g0196591 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0196591
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr07: 19743313 .. 19745220 (+)
RNA-Seq Expression	Cmc07g0196591
Synteny	Cmc07g0196591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAAGTGAAATTGCTCGTCCCATTAGCACAATTCTTGATGGTTCTAATTATATTACATGGGCCAATCAAATGAAAAGTTTCTTAATTGGACGAAAATTATGGCGTATTGTCACGGGTGATATTGCCAAACCGACCAAACAAGACAAGGAAGATGATGGAAAATTTAGCGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAGATTATCATCTGGCTTAGTAACACATCAATTCCTGCTATCCATACACAATTTGATGCTTTTGAAAGTGCTCAAGAGTTATGGGATTTTCTGTCTACACGATTTAAGTCCGTCGGATTAGCGCATTACTATCAGTTGCACAATAATCTTGTTAATCTTAATCAAGAAGCTGGACAATCCGTCAATGAGTATCTAGCCGTGCTTCAACCTATCTGGACTCAACTTGATCAAGCTAAAATCAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTTCCTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTGCACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCTAAACATTCTGATGTTGTTCTTGCCAGCACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCACTGGTCATAAATTTATTGATTGTCCTAAAATAGAATGCAGGTACTGCCATAAACCAGGTCATATTCTGGATAATTGTCCCATAAAACCACCTCGACCTCGAAGCTATTCTACAAGAGCAAAGAACTTCACTAAACCCAGGAACTTCTCTGTTGTTGCTGCTACTTTAGACAATCCTACCACACCCCAGTTTCAGATAAGTGATCTCCAAAGTTTGCTAAATCAGTTAATTTCATCATCTTCCTCTGCACTTGCTGTCTCATCAGGTAATCGATGGCTTCTTGACTCTGCCTATTGCAATCATATGACATCTAATTATTCTCTTATGAACACTCCTAGTCCTGTTAAATCTTTACCTCCCATTTATGCTGCTGATGGCAATTGTATGAATATCACCCACATTGGCACTGTTAATACTCCCAGTATGAATCTTCCTCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATCTGTTGGTCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTCCCAATGATTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCCCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATTTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCACGCCTCTCCTGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTGCCAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTAATAAACCTTTTGATTTAATCCATTCTGACATTTGGGGCCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTTATTTATTGATGATTTCTCTCGTTTTACATGGATTTATTTTCTCAAACACCGCTCTGCATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCACACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGTCCCCACACTTCTCAACAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAGTACGCGCCCTTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGA

mRNA sequence

ATGGAGAAAAGTGAAATTGCTCGTCCCATTAGCACAATTCTTGATGGTTCTAATTATATTACATGGGCCAATCAAATGAAAAGTTTCTTAATTGGACGAAAATTATGGCGTATTGTCACGGGTGATATTGCCAAACCGACCAAACAAGACAAGGAAGATGATGGAAAATTTAGCGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAGATTATCATCTGGCTTAGTAACACATCAATTCCTGCTATCCATACACAATTTGATGCTTTTGAAAGTGCTCAAGAGTTATGGGATTTTCTGTCTACACGATTTAAGTCCGTCGGATTAGCGCATTACTATCAGTTGCACAATAATCTTGTTAATCTTAATCAAGAAGCTGGACAATCCGTCAATGAGTATCTAGCCGTGCTTCAACCTATCTGGACTCAACTTGATCAAGCTAAAATCAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTTCCTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTGCACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCTAAACATTCTGATGTTGTTCTTGCCAGCACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCACTGGTCATAAATTTATTGATTGTCCTAAAATAGAATGCAGGTACTGCCATAAACCAGGTCATATTCTGGATAATTGTCCCATAAAACCACCTCGACCTCGAAGCTATTCTACAAGAGCAAAGAACTTCACTAAACCCAGGAACTTCTCTGTTGTTGCTGCTACTTTAGACAATCCTACCACACCCCAGTTTCAGATAAGTGATCTCCAAAGTTTGCTAAATCAGTTAATTTCATCATCTTCCTCTGCACTTGCTGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCCCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATTTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCACGCCTCTCCTGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTGCCAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTAATAAACCTTTTGATTTAATCCATTCTGACATTTGGGGCCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTTATTTATTGATGATTTCTCTCGTTTTACATGGATTTATTTTCTCAAACACCGCTCTGCATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCACACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGTCCCCACACTTCTCAACAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAGTACGCGCCCTTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGA

Coding sequence (CDS)

ATGGAGAAAAGTGAAATTGCTCGTCCCATTAGCACAATTCTTGATGGTTCTAATTATATTACATGGGCCAATCAAATGAAAAGTTTCTTAATTGGACGAAAATTATGGCGTATTGTCACGGGTGATATTGCCAAACCGACCAAACAAGACAAGGAAGATGATGGAAAATTTAGCGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAGATTATCATCTGGCTTAGTAACACATCAATTCCTGCTATCCATACACAATTTGATGCTTTTGAAAGTGCTCAAGAGTTATGGGATTTTCTGTCTACACGATTTAAGTCCGTCGGATTAGCGCATTACTATCAGTTGCACAATAATCTTGTTAATCTTAATCAAGAAGCTGGACAATCCGTCAATGAGTATCTAGCCGTGCTTCAACCTATCTGGACTCAACTTGATCAAGCTAAAATCAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTTCCTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTGCACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCTAAACATTCTGATGTTGTTCTTGCCAGCACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCACTGGTCATAAATTTATTGATTGTCCTAAAATAGAATGCAGGTACTGCCATAAACCAGGTCATATTCTGGATAATTGTCCCATAAAACCACCTCGACCTCGAAGCTATTCTACAAGAGCAAAGAACTTCACTAAACCCAGGAACTTCTCTGTTGTTGCTGCTACTTTAGACAATCCTACCACACCCCAGTTTCAGATAAGTGATCTCCAAAGTTTGCTAAATCAGTTAATTTCATCATCTTCCTCTGCACTTGCTGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCCCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATTTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCACGCCTCTCCTGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTGCCAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTAATAAACCTTTTGATTTAATCCATTCTGACATTTGGGGCCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTTATTTATTGATGATTTCTCTCGTTTTACATGGATTTATTTTCTCAAACACCGCTCTGCATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCACACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGTCCCCACACTTCTCAACAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAGTACGCGCCCTTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGA

Protein sequence

MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSERLEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLVNLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIECRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSLLNQLISSSSSALAVQDPQTGQTIGTGPKVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVPFNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKF

Homology

[Close]

BLAST of Cmc07g0196591 vs. NCBI nr
Match: KAA0056932.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 987.3 bits (2551), Expect = 5.4e-284
Identity = 502/592 (84.80%), Postives = 511/592 (86.32%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDNKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSP  ASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPSEASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPILLNLYLPFMLL 360

Query: 361 ---VQDPQTGQTIGTGPKVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKL 420
              VQDPQT QTIGTG KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRL HASPEKL
Sbjct: 361 TAIVQDPQTVQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLSHASPEKL 420

Query: 421 RHLISINHLNSTAKFVPFNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTV 480
           RHLISIN+LNS  KFVPFNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTV
Sbjct: 421 RHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 480

Query: 481 HGYRYYVLFIDDFSRFTWIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKD 540
           HGYRYYVLFIDDFSRFTWIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKD
Sbjct: 481 HGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKD 540

Query: 541 STLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKF 543
           STLLSFLSQQGTLVQRSCPHTSQQNGRAE KHRHILDSVRALLLSASCPEKF
Sbjct: 541 STLLSFLSQQGTLVQRSCPHTSQQNGRAECKHRHILDSVRALLLSASCPEKF 591

[Close]

BLAST of Cmc07g0196591 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 987.3 bits (2551), Expect = 5.4e-284
Identity = 507/635 (79.84%), Postives = 517/635 (81.42%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S     LD  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVALDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFE+LSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFEVLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

[Close]

BLAST of Cmc07g0196591 vs. NCBI nr
Match: TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 985.7 bits (2547), Expect = 1.6e-283
Identity = 507/635 (79.84%), Postives = 516/635 (81.26%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

[Close]

BLAST of Cmc07g0196591 vs. NCBI nr
Match: TYK26360.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 985.7 bits (2547), Expect = 1.6e-283
Identity = 507/635 (79.84%), Postives = 516/635 (81.26%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

[Close]

BLAST of Cmc07g0196591 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 985.7 bits (2547), Expect = 1.6e-283
Identity = 507/635 (79.84%), Postives = 516/635 (81.26%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

[Close]

BLAST of Cmc07g0196591 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.3e-34
Identity = 84/236 (35.59%), Postives = 130/236 (55.08%), Query Frame = 0


Query: 310 SALAVQDPQTGQTIGTGPKVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEK 369
           ++  V+D  TG  +  G     L+E         S  ++P + +    WH RLGH +P  
Sbjct: 419 ASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSI 478

Query: 370 LRHLI---SINHLNSTAKFVPFNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAP 429
           L  +I   S++ LN + KF+  +C +C + K   + FS ST  S +P + I+SD+W  +P
Sbjct: 479 LNSVISNYSLSVLNPSHKFL--SCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SP 538

Query: 430 TSTVHGYRYYVLFIDDFSRFTWIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNAL 489
             +   YRYYV+F+D F+R+TW+Y LK +S +  T+I F N++  +F   I T  +DN  
Sbjct: 539 ILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGG 598

Query: 490 EYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKF 543
           E+    L  + SQ G     S PHT + NG +ERKHRHI+++   LL  AS P+ +
Sbjct: 599 EF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTY 649

[Close]

BLAST of Cmc07g0196591 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.7e-34
Identity = 87/237 (36.71%), Postives = 132/237 (55.70%), Query Frame = 0


Query: 310 SALAVQDPQTGQTIGTGPKVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEK 369
           ++  V+D  TG  +  G     L+E       + S  ++P + +    WH RLGH S   
Sbjct: 398 ASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAI 457

Query: 370 LRHLISINH----LNSTAKFVPFNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPA 429
           L  +IS NH    LN + K +  +C +C + K   + FS ST  S+KP + I+SD+W  +
Sbjct: 458 LNSVIS-NHSLPVLNPSHKLL--SCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-S 517

Query: 430 PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNA 489
           P  ++  YRYYV+F+D F+R+TW+Y LK +S +  T+I F +++  +F   I TL +DN 
Sbjct: 518 PILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNG 577

Query: 490 LEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKF 543
            E+    L  +LSQ G     S PHT + NG +ERKHRHI++    LL  AS P+ +
Sbjct: 578 GEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTY 628

[Close]

BLAST of Cmc07g0196591 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.1e-24
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 0


Query: 358 WHLRLGHASPEKLRHLISINHLNSTAKFVPFN-CLNCKLAKQPALSFSTSTSISNKPFDL 417
           WH R+GH S EK   +++   L S AK      C  C   KQ  +SF TS+       DL
Sbjct: 425 WHKRMGHMS-EKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 484

Query: 418 IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSALSRTYIEFANMIHTQFSCP 477
           ++SD+ GP    ++ G +Y+V FIDD SR  W+Y LK +  + + + +F  ++  +    
Sbjct: 485 VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 544

Query: 478 IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 537
           +K LR+DN  EY       + S  G   +++ P T Q NG AER +R I++ VR++L  A
Sbjct: 545 LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 604

Query: 538 SCPEKF 543
             P+ F
Sbjct: 605 KLPKSF 609

[Close]

BLAST of Cmc07g0196591 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 90.9 bits (224), Expect = 4.8e-17
Identity = 56/194 (28.87%), Postives = 92/194 (47.42%), Query Frame = 0


Query: 358 WHLRLGHASPEKL-----RHLIS----INHLNSTAKFVPFNCLNCKLAKQPALSFSTSTS 417
           WH R GH S  KL     +++ S    +N+L  + +     CLN K A+ P       T 
Sbjct: 418 WHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICE-PCLNGKQARLPFKQLKDKTH 477

Query: 418 ISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSALSRTYIEFANM 477
           I  +P  ++HSD+ GP    T+    Y+V+F+D F+ +   Y +K++S +   + +F   
Sbjct: 478 I-KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAK 537

Query: 478 IHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDS 537
               F+  +  L  DN  EY  + +  F  ++G     + PHT Q NG +ER  R I + 
Sbjct: 538 SEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEK 597

Query: 538 VRALLLSASCPEKF 543
            R ++  A   + F
Sbjct: 598 ARTMVSGAKLDKSF 609

[Close]

BLAST of Cmc07g0196591 vs. ExPASy Swiss-Prot
Match: Q12490 (Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-BL PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-12
Identity = 55/220 (25.00%), Postives = 97/220 (44.09%), Query Frame = 0


Query: 343 PSSISAPV-----TDSDTYQW-----HLRLGHASPEKLRHLI---SINHLNST----AKF 402
           PS+IS P      T   T ++     H  L HA+ + +R+ +   +I + N +    +  
Sbjct: 573 PSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSA 632

Query: 403 VPFNCLNCKLAKQPALSFSTSTSI----SNKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 462
           + + C +C + K         + +    S +PF  +H+DI+GP          Y++ F D
Sbjct: 633 IDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTD 692

Query: 463 DFSRFTWIYFLKHR--SALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQ 522
           + ++F W+Y L  R   ++   +      I  QF   +  ++ D   EY + TL  FL +
Sbjct: 693 ETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752

Query: 523 QGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCP 540
            G     +    S+ +G AER +R +LD  R  L  +  P
Sbjct: 753 NGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLP 792

[Close]

BLAST of Cmc07g0196591 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 987.3 bits (2551), Expect = 2.6e-284
Identity = 507/635 (79.84%), Postives = 517/635 (81.42%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S     LD  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVALDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFE+LSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFEVLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

[Close]

BLAST of Cmc07g0196591 vs. ExPASy TrEMBL
Match: A0A5A7UM60 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001060 PE=4 SV=1)

HSP 1 Score: 987.3 bits (2551), Expect = 2.6e-284
Identity = 502/592 (84.80%), Postives = 511/592 (86.32%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDNKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSP  ASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPSEASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPILLNLYLPFMLL 360

Query: 361 ---VQDPQTGQTIGTGPKVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKL 420
              VQDPQT QTIGTG KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRL HASPEKL
Sbjct: 361 TAIVQDPQTVQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLSHASPEKL 420

Query: 421 RHLISINHLNSTAKFVPFNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTV 480
           RHLISIN+LNS  KFVPFNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTV
Sbjct: 421 RHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTV 480

Query: 481 HGYRYYVLFIDDFSRFTWIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKD 540
           HGYRYYVLFIDDFSRFTWIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKD
Sbjct: 481 HGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKD 540

Query: 541 STLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKF 543
           STLLSFLSQQGTLVQRSCPHTSQQNGRAE KHRHILDSVRALLLSASCPEKF
Sbjct: 541 STLLSFLSQQGTLVQRSCPHTSQQNGRAECKHRHILDSVRALLLSASCPEKF 591

[Close]

BLAST of Cmc07g0196591 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 985.7 bits (2547), Expect = 7.6e-284
Identity = 507/635 (79.84%), Postives = 516/635 (81.26%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

[Close]

BLAST of Cmc07g0196591 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 985.7 bits (2547), Expect = 7.6e-284
Identity = 507/635 (79.84%), Postives = 516/635 (81.26%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

[Close]

BLAST of Cmc07g0196591 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 985.7 bits (2547), Expect = 7.6e-284
Identity = 507/635 (79.84%), Postives = 516/635 (81.26%), Query Frame = 0


Query: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKPTKQDKEDDGKFSER 60
           MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDI KPTKQDKEDD KF ER
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIER 60

Query: 61  LEEWDSKNHQIIIWLSNTSIPAIHTQFDAFESAQELWDFLSTRFKSVGLAHYYQLHNNLV 120
           LEEWDSKNHQII WLSNTSIPAIHTQFDAFE+A+ELW+FLSTRFKSVGLAHYYQLHN+LV
Sbjct: 61  LEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNSLV 120

Query: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQAKISKDHLRLIKVLMGLPPEYESVRAALLHRSPL 180
           NLNQEAGQSVNEYLAVLQPIWTQLDQA ISKDHLRLIKVLMGL PEYESVRAALLHRSPL
Sbjct: 121 NLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPL 180

Query: 181 PSLDAAIQEILFEEKRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPKIE 240
           PSLDAAIQEILFEE+RLGINLSKHSD VLASTYSPPGASSTFCKNCKLTGHKFI+CPKIE
Sbjct: 181 PSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIE 240

Query: 241 CRYCHKPGHILDNCPIKPPRPRSYSTRAKNFTKPRNFSVVAATLDNPTTPQFQISDLQSL 300
           CRYCHKPGHILDNCPIKPPRPR+YSTRAKNFTKP N S      D  T PQFQISDLQSL
Sbjct: 241 CRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL 300

Query: 301 LNQLISSSSSALA----------------------------------------------- 360
           LNQLISS SSALA                                               
Sbjct: 301 LNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNIT 360

Query: 361 ----------------------------------------------VQDPQTGQTIGTGP 420
                                                         VQDPQTGQTIGTG 
Sbjct: 361 HMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGR 420

Query: 421 KVGRLFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTAKFVP 480
           KVGRLFELLSLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS  KFVP
Sbjct: 421 KVGRLFELLSLQVPSP-SISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVP 480

Query: 481 FNCLNCKLAKQPALSFSTSTSISNKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540
           FNCLNCKLAKQPALSFSTSTSI +KPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT
Sbjct: 481 FNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFT 540

Query: 541 WIYFLKHRSALSRTYIEFANMIHTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 543
           WIYFLKHRS LSRTYIEFANMI TQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
Sbjct: 541 WIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS 600

The following BLAST results are available for this feature:

BLAST of Cmc07g0196591 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056932.1	5.4e-284	84.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0037745.1	5.4e-284	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK19656.1	1.6e-283	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK26360.1	1.6e-283	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	1.6e-283	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc07g0196591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.3e-34	35.59	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.7e-34	36.71	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	4.1e-24	34.95	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.8e-17	28.87	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q12490	1.6e-12	25.00	Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 2...	[more]

BLAST of Cmc07g0196591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8F2	2.6e-284	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UM60	2.6e-284	84.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VIT8	7.6e-284	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	7.6e-284	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	7.6e-284	79.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc07g0196591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 222..238 e-value: 0.2 score: 15.6 coord: 240..256 e-value: 0.025 score: 21.1
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 65..196 e-value: 6.3E-13 score: 48.7
None	No IPR available	GENE3D	4.10.60.10		coord: 210..261 e-value: 2.9E-7 score: 32.2
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 295..537
None	No IPR available	PANTHER	PTHR11439:SF324	RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 295..537
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 340..398 e-value: 9.9E-9 score: 34.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 404..541 e-value: 1.8E-30 score: 107.7
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 411..511 e-value: 1.3E-10 score: 41.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 409..542 score: 17.201975
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 14..39 e-value: 1.8E-6 score: 27.6
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 217..257
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 409..537

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0196591.1	Cmc07g0196591.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding