Cmc07g0194891 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0194891
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 17830848 .. 17832964 (-)
RNA-Seq Expression	Cmc07g0194891
Synteny	Cmc07g0194891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCTTATGTATTGACTATAGAGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCCTTACCCAGGATCGGCGATCTGTTTGACCAGTTACAAGAAGCTACAGTGTTCTCTAAGATAGACCTTCGGTCGGGATATCATCAGCTGAGAATTAAGGATAGCGATGTACCAAAGACAGCGTTTCGTTCCAGATATGGGCACTATGAGTTTATTGTGGTGTCTTTTGGTTTGACGAATGCTCCGAAAGTGTTTATGGATTTGATGAATAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATCATGTTAGTGATGATATTTTGATATATTCCAAGTCAGAGACCGAGCATGAGGAGCATTTACGTATGGTTCTAGAAACCCTTCAAGCTAATAAACTGTATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTGGTGTTTCCGTGGATCTAGCTAAGATAGAAGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCATTGAGGTTCGTAGTTTTATGGGTTTAGCGGGTTATTACCGATGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACCCAGTTGACCAGGAAGGGAACCCCTTTTGTTTGGAGCAAGGCCTATAAAGAAAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGATTCTTACTGTACCTGATGGTTTAGGGAGTTTTGTGATTTACAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTCAGAGTTGGCAGCAGTAGTTTTTGCACTGAAGATATGAAGGCATTACTTGTATGGTGAAAAGATACAAATCTTCACGGATCATAAAAGCTTGAAATACTTCTTCACTCAGAAGGAATTGAATATGAGACAGCAAAGATGACTTGATTTAGTGAAGGATTACGATTGTGAGATATTGTATCATCTAGGCAAGACGAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTTTCACATTCAGCAGCACTTATTACCCGACATGCCCCGTTACATCGAGATTTTGAGAGTGCTGTGATTGCAGTGTCAGTAGGGACAGTCACTTTGCAGTTAGCCCAGTTGACGGTGCAGCCGACATTGAGGCAGAAGATCATTGTTGCTCAGAGAAACGATTCTTACTTGGTTGAGAAGCATTGCCTAGCAGAAGCAGGGCAAGCTGTTGAGTTCTCTATATCCTCTGATGGTGGGCTTTTATTTGAGAGGCGCCTTTGTGTGCCAACAGATAGTGCGGTTAAAACAGAACTATTGACTGAGGCTCATAGTTCTCCATTTTCCATGCACCCAGGTAGTAAAAAAATGTATCAGGACCTGCAACGAGTTTACTGGTGGAGTAATATGAAGAGGGAGGTGGCGAAATTTGTCAGTAAATGCTTGGTGTGTCAGCAGGTTAAAGCACCAAGGCAGAAACCAGTAGGTTTATTACAACCCTTGAGCGTACGGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATCACAGGACTGCCTAGAACTCTAAGGGGTTTCATAGTGATCTGGGTTGTTGTTGACAGGCTTACCAAATTAGCACACTTCATTCCGGGGAAGTCCACTTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTATGATAGAGATGCTCGTTTCACTTTCAAGTCCTGGAAGGGTTTACAGTCTGCCATGGGCACGATGTTAGACTTTAGTACTGCTTTCCACCCACAGACTGACGGTCAGACTGAGCGTTTGAACCAAGTTTTAGAGGATATGTTCCGAGCTTGCGCATTAGAATTCCCAGGTAGTTGGGATTGTCACTTACATTTGATGGAATTTGCTTATAATAACAGTTTTCGGGCTACCATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATTCCCTGTTTGCTGGGATGAGGTTGGTAAGCAGAGATTGATAGGTCTTGAGTTGGTTTAG

mRNA sequence

ATGCGCTTATGTATTGACTATAGAGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCCTTACCCAGGATCGGCGATCTGTTTGACCAGTTACAAGAAGCTACAGTGTTCTCTAAGATAGACCTTCGGTCGGGATATCATCAGCTGAGAATTAAGGATAGCGATGTACCAAAGACAGCGTTTCGTTCCAGATATGGGCACTATGAGTTTATTGTGGTGTCTTTTGAGACCGAGCATGAGGAGCATTTACGTATGGTTCTAGAAACCCTTCAAGCTAATAAACTGTATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTGGTGTTTCCGTGGATCTAGCTAAGATAGAAGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCATTGAGGTTCGTAGTTTTATGGGTTTAGCGGGTTATTACCGATGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACCCAGTTGACCAGGAAGGGAACCCCTTTTGTTTGGAGCAAGGCCTATAAAGAAAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGATTCTTACTGTACCTGATGGTTTAGGGAGTTTTGTGATTTACAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTCAGAGTTGGCAGCAGATTACGATTGTGAGATATTGTATCATCTAGGCAAGACGAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTTTCACATTCAGCAGCACTTATTACCCGACATGCCCCGTTACATCGAGATTTTGAGAGTGCTGTGATTGCAGTGTCAGTAGGGACAGTCACTTTGCAGTTAGCCCAGTTGACGGTGCAGCCGACATTGAGGCAGAAGATCATTGTTGCTCAGAGAAACGATTCTTACTTGGTTGAGAAGCATTGCCTAGCAGAAGCAGGGCAAGCTGTTGAGTTCTCTATATCCTCTGATGGTGGGCTTTTATTTGAGAGGCGCCTTTGTGTGCCAACAGATAGTGCGGTTAAAACAGAACTATTGACTGAGGCTCATAGTTCTCCATTTTCCATGCACCCAGGTAGTAAAAAAATGTATCAGGACCTGCAACGAGTTTACTGGTGGAGTAATATGAAGAGGGAGGTGGCGAAATTTGTCAGTAAATGCTTGGTGTGTCAGCAGGTTAAAGCACCAAGGCAGAAACCAGTAGGTTTATTACAACCCTTGAGCGTACGGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATCACAGGACTGCCTAGAACTCTAAGGGGTTTCATAGTGATCTGGGTTGTTGTTGACAGGCTTACCAAATTAGCACACTTCATTCCGGGGAAGTCCACTTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTATGATAGAGATGCTCGTTTCACTTTCAAGTCCTGGAAGGGTTTACAGTCTGCCATGGGCACGATGTTAGACTTTAGTACTGCTTTCCACCCACAGACTGACGGTCAGACTGAGCGTTTGAACCAAGTTTTAGAGGATATGTTCCGAGCTTGCGCATTAGAATTCCCAGGTAGTTGGGATTGTCACTTACATTTGATGGAATTTGCTTATAATAACAGTTTTCGGGCTACCATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATTCCCTGTTTGCTGGGATGAGGTTGGTAAGCAGAGATTGATAGGTCTTGAGTTGGTTTAG

Coding sequence (CDS)

ATGCGCTTATGTATTGACTATAGAGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCCTTACCCAGGATCGGCGATCTGTTTGACCAGTTACAAGAAGCTACAGTGTTCTCTAAGATAGACCTTCGGTCGGGATATCATCAGCTGAGAATTAAGGATAGCGATGTACCAAAGACAGCGTTTCGTTCCAGATATGGGCACTATGAGTTTATTGTGGTGTCTTTTGAGACCGAGCATGAGGAGCATTTACGTATGGTTCTAGAAACCCTTCAAGCTAATAAACTGTATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTGGTGTTTCCGTGGATCTAGCTAAGATAGAAGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCATTGAGGTTCGTAGTTTTATGGGTTTAGCGGGTTATTACCGATGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACCCAGTTGACCAGGAAGGGAACCCCTTTTGTTTGGAGCAAGGCCTATAAAGAAAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGATTCTTACTGTACCTGATGGTTTAGGGAGTTTTGTGATTTACAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTCAGAGTTGGCAGCAGATTACGATTGTGAGATATTGTATCATCTAGGCAAGACGAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTTTCACATTCAGCAGCACTTATTACCCGACATGCCCCGTTACATCGAGATTTTGAGAGTGCTGTGATTGCAGTGTCAGTAGGGACAGTCACTTTGCAGTTAGCCCAGTTGACGGTGCAGCCGACATTGAGGCAGAAGATCATTGTTGCTCAGAGAAACGATTCTTACTTGGTTGAGAAGCATTGCCTAGCAGAAGCAGGGCAAGCTGTTGAGTTCTCTATATCCTCTGATGGTGGGCTTTTATTTGAGAGGCGCCTTTGTGTGCCAACAGATAGTGCGGTTAAAACAGAACTATTGACTGAGGCTCATAGTTCTCCATTTTCCATGCACCCAGGTAGTAAAAAAATGTATCAGGACCTGCAACGAGTTTACTGGTGGAGTAATATGAAGAGGGAGGTGGCGAAATTTGTCAGTAAATGCTTGGTGTGTCAGCAGGTTAAAGCACCAAGGCAGAAACCAGTAGGTTTATTACAACCCTTGAGCGTACGGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATCACAGGACTGCCTAGAACTCTAAGGGGTTTCATAGTGATCTGGGTTGTTGTTGACAGGCTTACCAAATTAGCACACTTCATTCCGGGGAAGTCCACTTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTATGATAGAGATGCTCGTTTCACTTTCAAGTCCTGGAAGGGTTTACAGTCTGCCATGGGCACGATGTTAGACTTTAGTACTGCTTTCCACCCACAGACTGACGGTCAGACTGAGCGTTTGAACCAAGTTTTAGAGGATATGTTCCGAGCTTGCGCATTAGAATTCCCAGGTAGTTGGGATTGTCACTTACATTTGATGGAATTTGCTTATAATAACAGTTTTCGGGCTACCATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATTCCCTGTTTGCTGGGATGAGGTTGGTAAGCAGAGATTGATAGGTCTTGAGTTGGTTTAG

Protein sequence

MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTAFRSRYGHYEFIVVSFETEHEEHLRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTVPDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAADYDCEILYHLGKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTELLTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLEDMFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDEVGKQRLIGLELV

Homology

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BLAST of Cmc07g0194891 vs. NCBI nr
Match: KAA0026030.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1093.2 bits (2826), Expect = 0.0e+00
Identity = 548/593 (92.41%), Postives = 548/593 (92.41%), Query Frame = 0


Query: 24  IGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTAFRSRYGHYEFIVVSF-------- 83
           IGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTAFRSRYGHYEFIVVSF        
Sbjct: 109 IGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTAFRSRYGHYEFIVVSFGLTNAPKS 168

Query: 84  ETEHEEHLRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWP 143
           ETEHEEHLRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWP
Sbjct: 169 ETEHEEHLRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWP 228

Query: 144 RPSTVIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLV 203
           RPSTVIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLV
Sbjct: 229 RPSTVIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLV 288

Query: 204 TAPILTVPDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAD 263
           TAPILTVPDGLGSFVIYSDASKKGLGCVLMQQ                            
Sbjct: 289 TAPILTVPDGLGSFVIYSDASKKGLGCVLMQQ---------------------------- 348

Query: 264 YDCEILYHLGKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLT 323
                    GKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLT
Sbjct: 349 ---------GKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLT 408

Query: 324 VQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTEL 383
           VQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTEL
Sbjct: 409 VQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTEL 468

Query: 384 LTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQ 443
           LTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQ
Sbjct: 469 LTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQ 528

Query: 444 PLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYM 503
           PLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYM
Sbjct: 529 PLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYM 588

Query: 504 SEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLED 563
           SEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLED
Sbjct: 589 SEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLED 648

Query: 564 MFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDE 609
           MFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDE
Sbjct: 649 MFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDE 664

[Close]

BLAST of Cmc07g0194891 vs. NCBI nr
Match: KAA0062245.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1092.0 bits (2823), Expect = 0.0e+00
Identity = 548/667 (82.16%), Postives = 572/667 (85.76%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 722  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 781

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 782  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 841

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            LRMVL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPST+ E
Sbjct: 842  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISE 901

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            VRSF+GLAGYYR FVENF RIATPLTQLTRKG PFVWSKA ++SFQNLKQKLVTAP+LTV
Sbjct: 902  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 961

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
            PDG GSFVIYSDA KKGLGCVLMQQGKVV YASRQLKSHEQNYPTHD ELAA        
Sbjct: 962  PDGSGSFVIYSDACKKGLGCVLMQQGKVVPYASRQLKSHEQNYPTHDLELAAVRRWLELV 1021

Query: 301  -DYDCEILYHLGKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQ 360
             DYDCEILYH GK NVV DALSRKVSHSAALITR APLHRD E A IAVSVG VT+QLAQ
Sbjct: 1022 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 1081

Query: 361  LTVQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKT 420
            LTVQPTLRQ+II AQ ND YLVEK  LAEAGQA EFS+SSDGGLLFERRLCVP+DSAVKT
Sbjct: 1082 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKT 1141

Query: 421  ELLTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGL 480
            ELL+EAHSSPFSMHPGS KMYQDL+RVYWW NMKREVA+FVSKCLVCQQVKAP QKP GL
Sbjct: 1142 ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPTQKPAGL 1201

Query: 481  LQPLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQL 540
            LQPLS+ EWKWENVSMDFITGLPRTLRGF VIWVVVDRLTK AHF+ GKSTYTASKWAQL
Sbjct: 1202 LQPLSIPEWKWENVSMDFITGLPRTLRGFSVIWVVVDRLTKSAHFVSGKSTYTASKWAQL 1261

Query: 541  YMSEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVL 600
            YMSEIVRLHGVPVSIV DRDARFT K WKGLQ+AMGT LDFSTAFHPQTDGQTERLNQVL
Sbjct: 1262 YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVL 1321

Query: 601  EDMFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDEVGKQR 621
            EDM RACALEFPGSWD HLHLMEFAYNNS++ATIGMAPFEALYGKCC+ PVCW EVG+QR
Sbjct: 1322 EDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCKSPVCWGEVGEQR 1381

[Close]

BLAST of Cmc07g0194891 vs. NCBI nr
Match: KAA0026271.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 549/705 (77.87%), Postives = 573/705 (81.28%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
           MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
           FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
           LR+VL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPSTV E
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
           VRSF+GLAGYYR FVENF RIATPLTQLTRKG PFVWSKA ++SFQNLKQKLVTAP+LTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
           PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAA        
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 ---------------------------------------DYDCEILYHLGKTNVVVDALS 360
                                                  DYDCEILYH GK NVV DALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIVAQRNDSYLV 420
           RKVSHSAALITR APLHRD E A IAVSVG VT+QLAQLTVQPTLRQ+II AQ ND YLV
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLV 610

Query: 421 EKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTELLTEAHSSPFSMHPGSKKMYQ 480
           EK  LAEAGQAVEFS+SSDGGLLFER LCVP+DSA KTELL+EAHSSPFSMHPGS KMYQ
Sbjct: 611 EKRSLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQ 670

Query: 481 DLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKWENVSMDFITGL 540
           DL+RVYWW NMKREVA+FVSKCLVCQQVKAPRQKPVGLLQPLS+ EWKWENVSMDFITGL
Sbjct: 671 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGL 730

Query: 541 PRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVYDRDAR 600
           PRTLRGF VIWVVVDRLTK AHF+PGKSTYTASKWAQLYMSEIVRLH VPVSIV D+DAR
Sbjct: 731 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDAR 790

Query: 601 FTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLEDMFRACALEFPGSWDCHLHLM 621
           FT K WKGLQ+AMGT LDFSTAFHPQTDGQTERLNQVLEDM RACALEFPGSWD HLHLM
Sbjct: 791 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM 850

[Close]

BLAST of Cmc07g0194891 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 548/705 (77.73%), Postives = 573/705 (81.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            LRMVL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPSTV E
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            VRSF+GLAGYYR FVENF RIATPLTQLTRKG PFVWSKA ++SFQNLKQKLVTAP+LTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAA        
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  ---------------------------------------DYDCEILYHLGKTNVVVDALS 360
                                                   DYDCEILYH GK NVV DALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIVAQRNDSYLV 420
            RKVSHSAALITR APLHRD E A IAVSVG VT+QLAQLTVQPTLRQ+II AQ ND YLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTELLTEAHSSPFSMHPGSKKMYQ 480
            EK  LAEAGQAVEFS+SSDGGLLFERRLCVP+DS VKTELL+EAHSSPFSMHPGS KMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKWENVSMDFITGL 540
            D++RVYWW NMKREVA+FVS+CLVCQQVKAPRQKP GLLQPLS+ EWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

Query: 541  PRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVYDRDAR 600
            PRTLRGF VIWVVVDRLTK AHF+PGKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDAR
Sbjct: 1162 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1221

Query: 601  FTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLEDMFRACALEFPGSWDCHLHLM 621
            FT K WK LQ+AMGT LDFSTAFHPQTDGQTERLNQVLE M RACALEFPGSWD HLHLM
Sbjct: 1222 FTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLM 1281

[Close]

BLAST of Cmc07g0194891 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 548/705 (77.73%), Postives = 573/705 (81.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 994  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 1053

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 1054 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 1113

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            LR+VL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPSTV E
Sbjct: 1114 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1173

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            VRSF+GLAGYYR FVENF RIA PLTQLTRKG PFVWSKA ++SFQNLKQKLVTA +LTV
Sbjct: 1174 VRSFLGLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTV 1233

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAA        
Sbjct: 1234 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1293

Query: 301  ---------------------------------------DYDCEILYHLGKTNVVVDALS 360
                                                   DYDCEILYH  K NVV DALS
Sbjct: 1294 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALS 1353

Query: 361  RKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIVAQRNDSYLV 420
            RKVSHSAALITR APLHRD E A IAVSVG VT QLAQLTVQ TLRQ+II AQ ND YLV
Sbjct: 1354 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTTQLAQLTVQSTLRQRIIDAQGNDPYLV 1413

Query: 421  EKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTELLTEAHSSPFSMHPGSKKMYQ 480
            EK  LAEAGQAVEFS+SSDGGLLFERRLCVP+DSAVKTELL+EAHSSPFSMHPGS KMYQ
Sbjct: 1414 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1473

Query: 481  DLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKWENVSMDFITGL 540
            DL+RVYWW NMKREVA+FVSKCLVCQQVKAPRQKP GLLQPLS+ EWKWEN+SMDFITGL
Sbjct: 1474 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENMSMDFITGL 1533

Query: 541  PRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVYDRDAR 600
            PRTLRGFIVIWVVVDRLTK AHF+PGKSTYTASKWAQLYMSEIVRLHGVPVSIV+DRDAR
Sbjct: 1534 PRTLRGFIVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDAR 1593

Query: 601  FTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLEDMFRACALEFPGSWDCHLHLM 621
            FT K WKGLQ+AMGT LDFSTAFHPQTDGQTERLNQVLEDM RACALEFPGSWD HLHLM
Sbjct: 1594 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM 1653

[Close]

BLAST of Cmc07g0194891 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.3e-84
Identity = 191/692 (27.60%), Postives = 322/692 (46.53%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            +R+ +DY+ LNK    N YPLP I  L  ++Q +T+F+K+DL+S YH +R++  D  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FR   G +E++V+ +                                      E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKH 581

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            +R F+G   Y R F+    ++  PL  L +K   + W+    ++ +N+KQ LV+ P+L  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAA--- 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ------------------------------------------------DYDCEILYHLGK 360
                                                            D++ EI Y  G 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIV 420
             N + DALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERR--LCVPTDSAVKTELLTEAHSSPF 480
               ND+ L+  + L    + VE +I    GLL   +  + +P D+ +   ++ + H    
Sbjct: 882  EYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKW 540
             +HPG + +   + R + W  +++++ ++V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGV 597
            E++SMDFIT LP +  G+  ++VVVDR +K+A  +P   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

[Close]

BLAST of Cmc07g0194891 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.3e-84
Identity = 191/692 (27.60%), Postives = 322/692 (46.53%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            +R+ +DY+ LNK    N YPLP I  L  ++Q +T+F+K+DL+S YH +R++  D  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FR   G +E++V+ +                                      E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            +R F+G   Y R F+    ++  PL  L +K   + W+    ++ +N+KQ LV+ P+L  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAA--- 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ------------------------------------------------DYDCEILYHLGK 360
                                                            D++ EI Y  G 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIV 420
             N + DALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERR--LCVPTDSAVKTELLTEAHSSPF 480
               ND+ L+  + L    + VE +I    GLL   +  + +P D+ +   ++ + H    
Sbjct: 882  EYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKW 540
             +HPG + +   + R + W  +++++ ++V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGV 597
            E++SMDFIT LP +  G+  ++VVVDR +K+A  +P   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

[Close]

BLAST of Cmc07g0194891 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.3e-84
Identity = 191/692 (27.60%), Postives = 322/692 (46.53%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            +R+ +DY+ LNK    N YPLP I  L  ++Q +T+F+K+DL+S YH +R++  D  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FR   G +E++V+ +                                      E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            +R F+G   Y R F+    ++  PL  L +K   + W+    ++ +N+KQ LV+ P+L  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAA--- 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ------------------------------------------------DYDCEILYHLGK 360
                                                            D++ EI Y  G 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIV 420
             N + DALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERR--LCVPTDSAVKTELLTEAHSSPF 480
               ND+ L+  + L    + VE +I    GLL   +  + +P D+ +   ++ + H    
Sbjct: 882  EYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKW 540
             +HPG + +   + R + W  +++++ ++V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGV 597
            E++SMDFIT LP +  G+  ++VVVDR +K+A  +P   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

[Close]

BLAST of Cmc07g0194891 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.3e-84
Identity = 191/692 (27.60%), Postives = 322/692 (46.53%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            +R+ +DY+ LNK    N YPLP I  L  ++Q +T+F+K+DL+S YH +R++  D  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FR   G +E++V+ +                                      E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            +R F+G   Y R F+    ++  PL  L +K   + W+    ++ +N+KQ LV+ P+L  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAA--- 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ------------------------------------------------DYDCEILYHLGK 360
                                                            D++ EI Y  G 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIV 420
             N + DALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERR--LCVPTDSAVKTELLTEAHSSPF 480
               ND+ L+  + L    + VE +I    GLL   +  + +P D+ +   ++ + H    
Sbjct: 882  EYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKW 540
             +HPG + +   + R + W  +++++ ++V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGV 597
            E++SMDFIT LP +  G+  ++VVVDR +K+A  +P   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

[Close]

BLAST of Cmc07g0194891 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.3e-84
Identity = 191/692 (27.60%), Postives = 322/692 (46.53%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            +R+ +DY+ LNK    N YPLP I  L  ++Q +T+F+K+DL+S YH +R++  D  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FR   G +E++V+ +                                      E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            +R F+G   Y R F+    ++  PL  L +K   + W+    ++ +N+KQ LV+ P+L  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAA--- 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ------------------------------------------------DYDCEILYHLGK 360
                                                            D++ EI Y  G 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIV 420
             N + DALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERR--LCVPTDSAVKTELLTEAHSSPF 480
               ND+ L+  + L    + VE +I    GLL   +  + +P D+ +   ++ + H    
Sbjct: 882  EYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKW 540
             +HPG + +   + R + W  +++++ ++V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGV 597
            E++SMDFIT LP +  G+  ++VVVDR +K+A  +P   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

[Close]

BLAST of Cmc07g0194891 vs. ExPASy TrEMBL
Match: A0A5A7SIM8 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00100 PE=4 SV=1)

HSP 1 Score: 1093.2 bits (2826), Expect = 0.0e+00
Identity = 548/593 (92.41%), Postives = 548/593 (92.41%), Query Frame = 0


Query: 24  IGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTAFRSRYGHYEFIVVSF-------- 83
           IGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTAFRSRYGHYEFIVVSF        
Sbjct: 109 IGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTAFRSRYGHYEFIVVSFGLTNAPKS 168

Query: 84  ETEHEEHLRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWP 143
           ETEHEEHLRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWP
Sbjct: 169 ETEHEEHLRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWP 228

Query: 144 RPSTVIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLV 203
           RPSTVIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLV
Sbjct: 229 RPSTVIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLV 288

Query: 204 TAPILTVPDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAD 263
           TAPILTVPDGLGSFVIYSDASKKGLGCVLMQQ                            
Sbjct: 289 TAPILTVPDGLGSFVIYSDASKKGLGCVLMQQ---------------------------- 348

Query: 264 YDCEILYHLGKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLT 323
                    GKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLT
Sbjct: 349 ---------GKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLT 408

Query: 324 VQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTEL 383
           VQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTEL
Sbjct: 409 VQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTEL 468

Query: 384 LTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQ 443
           LTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQ
Sbjct: 469 LTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQ 528

Query: 444 PLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYM 503
           PLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYM
Sbjct: 529 PLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYM 588

Query: 504 SEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLED 563
           SEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLED
Sbjct: 589 SEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLED 648

Query: 564 MFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDE 609
           MFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDE
Sbjct: 649 MFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDE 664

[Close]

BLAST of Cmc07g0194891 vs. ExPASy TrEMBL
Match: A0A5A7V8L8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE=4 SV=1)

HSP 1 Score: 1092.0 bits (2823), Expect = 0.0e+00
Identity = 548/667 (82.16%), Postives = 572/667 (85.76%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 722  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 781

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 782  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 841

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            LRMVL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPST+ E
Sbjct: 842  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISE 901

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            VRSF+GLAGYYR FVENF RIATPLTQLTRKG PFVWSKA ++SFQNLKQKLVTAP+LTV
Sbjct: 902  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 961

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
            PDG GSFVIYSDA KKGLGCVLMQQGKVV YASRQLKSHEQNYPTHD ELAA        
Sbjct: 962  PDGSGSFVIYSDACKKGLGCVLMQQGKVVPYASRQLKSHEQNYPTHDLELAAVRRWLELV 1021

Query: 301  -DYDCEILYHLGKTNVVVDALSRKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQ 360
             DYDCEILYH GK NVV DALSRKVSHSAALITR APLHRD E A IAVSVG VT+QLAQ
Sbjct: 1022 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 1081

Query: 361  LTVQPTLRQKIIVAQRNDSYLVEKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKT 420
            LTVQPTLRQ+II AQ ND YLVEK  LAEAGQA EFS+SSDGGLLFERRLCVP+DSAVKT
Sbjct: 1082 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKT 1141

Query: 421  ELLTEAHSSPFSMHPGSKKMYQDLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGL 480
            ELL+EAHSSPFSMHPGS KMYQDL+RVYWW NMKREVA+FVSKCLVCQQVKAP QKP GL
Sbjct: 1142 ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPTQKPAGL 1201

Query: 481  LQPLSVREWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQL 540
            LQPLS+ EWKWENVSMDFITGLPRTLRGF VIWVVVDRLTK AHF+ GKSTYTASKWAQL
Sbjct: 1202 LQPLSIPEWKWENVSMDFITGLPRTLRGFSVIWVVVDRLTKSAHFVSGKSTYTASKWAQL 1261

Query: 541  YMSEIVRLHGVPVSIVYDRDARFTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVL 600
            YMSEIVRLHGVPVSIV DRDARFT K WKGLQ+AMGT LDFSTAFHPQTDGQTERLNQVL
Sbjct: 1262 YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVL 1321

Query: 601  EDMFRACALEFPGSWDCHLHLMEFAYNNSFRATIGMAPFEALYGKCCRFPVCWDEVGKQR 621
            EDM RACALEFPGSWD HLHLMEFAYNNS++ATIGMAPFEALYGKCC+ PVCW EVG+QR
Sbjct: 1322 EDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCKSPVCWGEVGEQR 1381

[Close]

BLAST of Cmc07g0194891 vs. ExPASy TrEMBL
Match: A0A5A7SPZ2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE=4 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 549/705 (77.87%), Postives = 573/705 (81.28%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
           MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
           FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
           LR+VL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPSTV E
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
           VRSF+GLAGYYR FVENF RIATPLTQLTRKG PFVWSKA ++SFQNLKQKLVTAP+LTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
           PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAA        
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 ---------------------------------------DYDCEILYHLGKTNVVVDALS 360
                                                  DYDCEILYH GK NVV DALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIVAQRNDSYLV 420
           RKVSHSAALITR APLHRD E A IAVSVG VT+QLAQLTVQPTLRQ+II AQ ND YLV
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLV 610

Query: 421 EKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTELLTEAHSSPFSMHPGSKKMYQ 480
           EK  LAEAGQAVEFS+SSDGGLLFER LCVP+DSA KTELL+EAHSSPFSMHPGS KMYQ
Sbjct: 611 EKRSLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQ 670

Query: 481 DLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKWENVSMDFITGL 540
           DL+RVYWW NMKREVA+FVSKCLVCQQVKAPRQKPVGLLQPLS+ EWKWENVSMDFITGL
Sbjct: 671 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGL 730

Query: 541 PRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVYDRDAR 600
           PRTLRGF VIWVVVDRLTK AHF+PGKSTYTASKWAQLYMSEIVRLH VPVSIV D+DAR
Sbjct: 731 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDAR 790

Query: 601 FTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLEDMFRACALEFPGSWDCHLHLM 621
           FT K WKGLQ+AMGT LDFSTAFHPQTDGQTERLNQVLEDM RACALEFPGSWD HLHLM
Sbjct: 791 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM 850

[Close]

BLAST of Cmc07g0194891 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 548/705 (77.73%), Postives = 573/705 (81.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            LRMVL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPSTV E
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            VRSF+GLAGYYR FVENF RIATPLTQLTRKG PFVWSKA ++SFQNLKQKLVTAP+LTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAA        
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  ---------------------------------------DYDCEILYHLGKTNVVVDALS 360
                                                   DYDCEILYH GK NVV DALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIVAQRNDSYLV 420
            RKVSHSAALITR APLHRD E A IAVSVG VT+QLAQLTVQPTLRQ+II AQ ND YLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTELLTEAHSSPFSMHPGSKKMYQ 480
            EK  LAEAGQAVEFS+SSDGGLLFERRLCVP+DS VKTELL+EAHSSPFSMHPGS KMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKWENVSMDFITGL 540
            D++RVYWW NMKREVA+FVS+CLVCQQVKAPRQKP GLLQPLS+ EWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

Query: 541  PRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVYDRDAR 600
            PRTLRGF VIWVVVDRLTK AHF+PGKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDAR
Sbjct: 1162 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1221

Query: 601  FTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLEDMFRACALEFPGSWDCHLHLM 621
            FT K WK LQ+AMGT LDFSTAFHPQTDGQTERLNQVLE M RACALEFPGSWD HLHLM
Sbjct: 1222 FTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLM 1281

[Close]

BLAST of Cmc07g0194891 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 548/705 (77.73%), Postives = 573/705 (81.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNKYPLPRIGDLFDQLQEATVFSKIDLRSGYHQLRIKDSDVPKTA 60
            MRLCIDYRELNKVTVKN+YPLPRI DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 994  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 1053

Query: 61   FRSRYGHYEFIVVSF--------------------------------------ETEHEEH 120
            FRSRYGHYEFIV+SF                                      E EHEEH
Sbjct: 1054 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 1113

Query: 121  LRMVLETLQANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVIE 180
            LR+VL+TL+ NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAVT W RPSTV E
Sbjct: 1114 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1173

Query: 181  VRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPILTV 240
            VRSF+GLAGYYR FVENF RIA PLTQLTRKG PFVWSKA ++SFQNLKQKLVTA +LTV
Sbjct: 1174 VRSFLGLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTV 1233

Query: 241  PDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAA-------- 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAA        
Sbjct: 1234 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1293

Query: 301  ---------------------------------------DYDCEILYHLGKTNVVVDALS 360
                                                   DYDCEILYH  K NVV DALS
Sbjct: 1294 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALS 1353

Query: 361  RKVSHSAALITRHAPLHRDFESAVIAVSVGTVTLQLAQLTVQPTLRQKIIVAQRNDSYLV 420
            RKVSHSAALITR APLHRD E A IAVSVG VT QLAQLTVQ TLRQ+II AQ ND YLV
Sbjct: 1354 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTTQLAQLTVQSTLRQRIIDAQGNDPYLV 1413

Query: 421  EKHCLAEAGQAVEFSISSDGGLLFERRLCVPTDSAVKTELLTEAHSSPFSMHPGSKKMYQ 480
            EK  LAEAGQAVEFS+SSDGGLLFERRLCVP+DSAVKTELL+EAHSSPFSMHPGS KMYQ
Sbjct: 1414 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1473

Query: 481  DLQRVYWWSNMKREVAKFVSKCLVCQQVKAPRQKPVGLLQPLSVREWKWENVSMDFITGL 540
            DL+RVYWW NMKREVA+FVSKCLVCQQVKAPRQKP GLLQPLS+ EWKWEN+SMDFITGL
Sbjct: 1474 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENMSMDFITGL 1533

Query: 541  PRTLRGFIVIWVVVDRLTKLAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVYDRDAR 600
            PRTLRGFIVIWVVVDRLTK AHF+PGKSTYTASKWAQLYMSEIVRLHGVPVSIV+DRDAR
Sbjct: 1534 PRTLRGFIVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDAR 1593

Query: 601  FTFKSWKGLQSAMGTMLDFSTAFHPQTDGQTERLNQVLEDMFRACALEFPGSWDCHLHLM 621
            FT K WKGLQ+AMGT LDFSTAFHPQTDGQTERLNQVLEDM RACALEFPGSWD HLHLM
Sbjct: 1594 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM 1653

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BLAST of Cmc07g0194891 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 3.6e-24
Identity = 53/125 (42.40%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 82  HLRMVLETLQANKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDLAKIEAVTSWPRPST 141
           HL MVL+  + ++ YA   KC F   Q+++LG  H++S  GVS D AK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 142 VIEVRSFMGLAGYYRWFVENFFRIATPLTQLTRKGTPFVWSKAYKESFQNLKQKLVTAPI 201
             E+R F+GL GYYR FV+N+ +I  PLT+L +K +   W++    +F+ LK  + T P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 202 LTVPD 205
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc07g0194891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026030.1	0.0e+00	92.41	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0062245.1	0.0e+00	82.16	pol protein [Cucumis melo var. makuwa]	[more]
KAA0026271.1	0.0e+00	77.87	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	0.0e+00	77.73	pol protein [Cucumis melo var. makuwa]	[more]
KAA0031931.1	0.0e+00	77.73	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0194891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.3e-84	27.60	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.3e-84	27.60	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.3e-84	27.60	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.3e-84	27.60	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.3e-84	27.60	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0194891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIM8	0.0e+00	92.41	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7V8L8	0.0e+00	82.16	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE...	[more]
A0A5A7SPZ2	0.0e+00	77.87	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE...	[more]
A0A5A7U330	0.0e+00	77.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7SQU8	0.0e+00	77.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

BLAST of Cmc07g0194891 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.6e-24	42.40	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 126..216 e-value: 2.8E-27 score: 96.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..46 e-value: 3.2E-29 score: 103.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 74..121 e-value: 3.2E-13 score: 51.6
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 369..425 e-value: 1.5E-17 score: 63.4
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 179..254 e-value: 6.0E-21 score: 74.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 434..614 e-value: 3.2E-41 score: 142.8
None	No IPR available	GENE3D	1.10.340.70		coord: 314..424 e-value: 3.1E-18 score: 67.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..72 e-value: 3.2E-29 score: 103.8
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 361..593 coord: 136..254
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..116 e-value: 2.18646E-46 score: 159.683
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 432..599 score: 17.972221
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 437..593
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0194891.1	Cmc07g0194891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding