Cmc07g0191781 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0191781
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr07: 11882261 .. 11882659 (+)
RNA-Seq Expression	Cmc07g0191781
Synteny	Cmc07g0191781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTTCTTGGAAATAATCTTATCTCATCGTTTAGTAAGAAACAAAATTGTGTTTCCCTGTCTACTGCAGAAGCTGAGTATATTGTTGCCGAAAGTGCTTGTACTCAATTAATATGGAAGAAAAATATGTTGCATGAGTATGGATTCAAACAAGATATTATGACTCTATACTGTGATAATATGAGTGCTATTGGTATATCAAAAAATCCAGTTCAACATAGTCGAACCAAACATATTGATATAAGACATCATTTTATTAGAGAGATTATTGAAAATAATATTATCACACTGGAACATATTCGCTCAAATTTGCAATTAGCAGATATTTTCACTAAGCCACTTGATGCGAACACGTTTGAGCACTTACACACTAGATTAGGAGTGTGTCGAATTTAA

mRNA sequence

ATGTTCTTTCTTGGAAATAATCTTATCTCATCGTTTAGTAAGAAACAAAATTGTGTTTCCCTGTCTACTGCAGAAGCTGAGTATATTGTTGCCGAAAGTGCTTGTACTCAATTAATATGGAAGAAAAATATGTTGCATGAGTATGGATTCAAACAAGATATTATGACTCTATACTGTGATAATATGAGTGCTATTGGTATATCAAAAAATCCAGTTCAACATAGTCGAACCAAACATATTGATATAAGACATCATTTTATTAGAGAGATTATTGAAAATAATATTATCACACTGGAACATATTCGCTCAAATTTGCAATTAGCAGATATTTTCACTAAGCCACTTGATGCGAACACGTTTGAGCACTTACACACTAGATTAGGAGTGTGTCGAATTTAA

Coding sequence (CDS)

ATGTTCTTTCTTGGAAATAATCTTATCTCATCGTTTAGTAAGAAACAAAATTGTGTTTCCCTGTCTACTGCAGAAGCTGAGTATATTGTTGCCGAAAGTGCTTGTACTCAATTAATATGGAAGAAAAATATGTTGCATGAGTATGGATTCAAACAAGATATTATGACTCTATACTGTGATAATATGAGTGCTATTGGTATATCAAAAAATCCAGTTCAACATAGTCGAACCAAACATATTGATATAAGACATCATTTTATTAGAGAGATTATTGAAAATAATATTATCACACTGGAACATATTCGCTCAAATTTGCAATTAGCAGATATTTTCACTAAGCCACTTGATGCGAACACGTTTGAGCACTTACACACTAGATTAGGAGTGTGTCGAATTTAA

Protein sequence

MFFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDNMSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFEHLHTRLGVCRI

Homology

[Close]

BLAST of Cmc07g0191781 vs. NCBI nr
Match: KAA0055610.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 2.2e-53
Identity = 105/130 (80.77%), Postives = 113/130 (86.92%), Query Frame = 0


Query: 2   FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
           FFLGNNLIS  SKKQNCVSLST EAEYI A S CTQLIW KNMLHEYGF QD MTLYCDN
Sbjct: 153 FFLGNNLISWLSKKQNCVSLSTTEAEYIAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDN 212

Query: 62  MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
            SAI ISKNPVQHSRTKHIDIRHHFIRE++E+ +I L+HIRSNLQL DIFTKPLDA++FE
Sbjct: 213 TSAIDISKNPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLVDIFTKPLDASSFE 272

Query: 122 HLHTRLGVCR 132
           +L   LGVCR
Sbjct: 273 YLRAGLGVCR 282

[Close]

BLAST of Cmc07g0191781 vs. NCBI nr
Match: KAA0048308.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK10653.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49
Identity = 101/126 (80.16%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 2   FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
           FFLGNNLIS FSKKQN VSLSTAEAEYI   S CTQLIW KNMLHEY   QD+MT+YCDN
Sbjct: 109 FFLGNNLISWFSKKQNSVSLSTAEAEYIAVGSGCTQLIWMKNMLHEYEITQDVMTMYCDN 168

Query: 62  MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
           M+AI ISKNP+Q SRTK+IDIRHHFIRE+IEN IITLEHIRSN QLADIFTKPLDA TF+
Sbjct: 169 MNAIDISKNPIQRSRTKYIDIRHHFIRELIENKIITLEHIRSNSQLADIFTKPLDATTFD 228

Query: 122 HLHTRL 128
           HL   L
Sbjct: 229 HLRAGL 234

[Close]

BLAST of Cmc07g0191781 vs. NCBI nr
Match: MCH79363.1 (gag-pol polyprotein [Trifolium medium])

HSP 1 Score: 201.4 bits (511), Expect = 4.7e-48
Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 2    FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
            FFLGNNLIS FSKKQNCVSLSTAEAEYI A S+C+QL+W K ML +Y   QD+MTL+CDN
Sbjct: 1167 FFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLLWMKQMLKDYNVPQDVMTLFCDN 1226

Query: 62   MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
            +SAI ISKNP+QHSRTKHIDIRHHFIR+++E N++TLEH+ ++ QLADIFTK LDAN +E
Sbjct: 1227 LSAINISKNPIQHSRTKHIDIRHHFIRDLVEENVVTLEHVSTDEQLADIFTKALDANQYE 1286

Query: 122  HLHTRLGVC 131
             L  +LG+C
Sbjct: 1287 KLRGKLGIC 1295

[Close]

BLAST of Cmc07g0191781 vs. NCBI nr
Match: MCH79563.1 (gag-pol polyprotein [Trifolium medium])

HSP 1 Score: 200.7 bits (509), Expect = 8.0e-48
Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 2   FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
           FFLGNNLIS FSKKQNCVSLSTAEAEYI A S+C+ L+W K ML EY  +Q++MTLYCDN
Sbjct: 525 FFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSHLMWMKQMLKEYNVEQNVMTLYCDN 584

Query: 62  MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
           +SAI ISKNP+QHSRTKHIDIRHHFIR+++E N++TLEH+ ++ QLADIFTK +DAN FE
Sbjct: 585 LSAINISKNPIQHSRTKHIDIRHHFIRDLVEENVVTLEHVSTDEQLADIFTKAVDANQFE 644

Query: 122 HLHTRLGVC 131
            L  +LG+C
Sbjct: 645 KLRGKLGIC 653

[Close]

BLAST of Cmc07g0191781 vs. NCBI nr
Match: AAO73529.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 93/129 (72.09%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 2    FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
            F+LGNNLIS FSKKQNCVSLSTAEAEYI A S+C+QL+W K ML EY  +QD+MTLYCDN
Sbjct: 1444 FYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDN 1503

Query: 62   MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
            MSAI ISKNPVQHSRTKHIDIRHH+IRE++++ +ITLEH+ +  Q+ADIFTK LDA  FE
Sbjct: 1504 MSAINISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQFE 1563

Query: 122  HLHTRLGVC 131
             L  +LG+C
Sbjct: 1564 KLRGKLGIC 1572

[Close]

BLAST of Cmc07g0191781 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.1e-23
Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 1    MFFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCD 60
            +F      IS  SK Q CV+LST EAEYI A     ++IW K  L E G  Q    +YCD
Sbjct: 1197 LFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCD 1256

Query: 61   NMSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTF 120
            + SAI +SKN + H+RTKHID+R+H+IRE++++  + +  I +N   AD+ TK +  N F
Sbjct: 1257 SQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

Query: 121  E 122
            E
Sbjct: 1317 E 1317

[Close]

BLAST of Cmc07g0191781 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-22
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 7    NLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFK-QDIMTLYCDNMSAI 66
            NLI   +K+QN V+ S+ EAEY+    A  + +W K +L     K ++ + +Y DN   I
Sbjct: 1277 NLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCI 1336

Query: 67   GISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFEHLHT 126
             I+ NP  H R KHIDI++HF RE ++NN+I LE+I +  QLADIFTKPL A  F  L  
Sbjct: 1337 SIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRD 1396

Query: 127  RLGV 130
            +LG+
Sbjct: 1397 KLGL 1400

[Close]

BLAST of Cmc07g0191781 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.1e-19
Identity = 50/131 (38.17%), Postives = 79/131 (60.31%), Query Frame = 0


Query: 3    FLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFK-QDIMTLYCDN 62
            +LG++ IS  SKKQ  V  S+ EAEY    +  +++ W  ++L E G +      +YCDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392

Query: 63   MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 122
            + A  +  NPV HSR KHI I +HFIR  +++  + + H+ ++ QLAD  TKPL    F+
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452

Query: 123  HLHTRLGVCRI 133
            +  +++GV R+
Sbjct: 1453 NFASKIGVTRV 1463

[Close]

BLAST of Cmc07g0191781 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.0e-18
Identity = 49/131 (37.40%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 3    FLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFK-QDIMTLYCDN 62
            +LG++ IS  SKKQ  V  S+ EAEY    +  ++L W  ++L E G +      +YCDN
Sbjct: 1316 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDN 1375

Query: 63   MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 122
            + A  +  NPV HSR KHI + +HFIR  +++  + + H+ ++ QLAD  TKPL    F+
Sbjct: 1376 VGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQ 1435

Query: 123  HLHTRLGVCRI 133
            +   ++GV ++
Sbjct: 1436 NFSRKIGVIKV 1446

[Close]

BLAST of Cmc07g0191781 vs. ExPASy Swiss-Prot
Match: Q12113 (Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-OR1 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.7e-05
Identity = 35/124 (28.23%), Postives = 56/124 (45.16%), Query Frame = 0


Query: 1    MFFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCD 60
            +F L   +I   S K +    ST EAE      A   L    +++ E   K  I  L  D
Sbjct: 1641 IFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQELNKKPIIKGLLTD 1700

Query: 61   NMSAIGISKNPVQHS-RTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANT 120
            + S I I K+  +   R +    +   +R+ +  N + + +I +N  +AD+ TKPL   T
Sbjct: 1701 SRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETNKNIADVMTKPLPIKT 1760

Query: 121  FEHL 124
            F+ L
Sbjct: 1761 FKLL 1764

[Close]

BLAST of Cmc07g0191781 vs. ExPASy TrEMBL
Match: A0A5D3DLL1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00150 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53
Identity = 105/130 (80.77%), Postives = 113/130 (86.92%), Query Frame = 0


Query: 2   FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
           FFLGNNLIS  SKKQNCVSLST EAEYI A S CTQLIW KNMLHEYGF QD MTLYCDN
Sbjct: 153 FFLGNNLISWLSKKQNCVSLSTTEAEYIAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDN 212

Query: 62  MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
            SAI ISKNPVQHSRTKHIDIRHHFIRE++E+ +I L+HIRSNLQL DIFTKPLDA++FE
Sbjct: 213 TSAIDISKNPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLVDIFTKPLDASSFE 272

Query: 122 HLHTRLGVCR 132
           +L   LGVCR
Sbjct: 273 YLRAGLGVCR 282

[Close]

BLAST of Cmc07g0191781 vs. ExPASy TrEMBL
Match: A0A5A7TZB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00150 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.1e-50
Identity = 101/126 (80.16%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 2   FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
           FFLGNNLIS FSKKQN VSLSTAEAEYI   S CTQLIW KNMLHEY   QD+MT+YCDN
Sbjct: 109 FFLGNNLISWFSKKQNSVSLSTAEAEYIAVGSGCTQLIWMKNMLHEYEITQDVMTMYCDN 168

Query: 62  MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
           M+AI ISKNP+Q SRTK+IDIRHHFIRE+IEN IITLEHIRSN QLADIFTKPLDA TF+
Sbjct: 169 MNAIDISKNPIQRSRTKYIDIRHHFIRELIENKIITLEHIRSNSQLADIFTKPLDATTFD 228

Query: 122 HLHTRL 128
           HL   L
Sbjct: 229 HLRAGL 234

[Close]

BLAST of Cmc07g0191781 vs. ExPASy TrEMBL
Match: A0A392LWM0 (Gag-pol polyprotein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0000112 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48
Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 2    FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
            FFLGNNLIS FSKKQNCVSLSTAEAEYI A S+C+QL+W K ML +Y   QD+MTL+CDN
Sbjct: 1167 FFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLLWMKQMLKDYNVPQDVMTLFCDN 1226

Query: 62   MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
            +SAI ISKNP+QHSRTKHIDIRHHFIR+++E N++TLEH+ ++ QLADIFTK LDAN +E
Sbjct: 1227 LSAINISKNPIQHSRTKHIDIRHHFIRDLVEENVVTLEHVSTDEQLADIFTKALDANQYE 1286

Query: 122  HLHTRLGVC 131
             L  +LG+C
Sbjct: 1287 KLRGKLGIC 1295

[Close]

BLAST of Cmc07g0191781 vs. ExPASy TrEMBL
Match: A0A392LX79 (Gag-pol polyprotein OS=Trifolium medium OX=97028 GN=A2U01_0000314 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.9e-48
Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 2   FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
           FFLGNNLIS FSKKQNCVSLSTAEAEYI A S+C+ L+W K ML EY  +Q++MTLYCDN
Sbjct: 525 FFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSHLMWMKQMLKEYNVEQNVMTLYCDN 584

Query: 62  MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
           +SAI ISKNP+QHSRTKHIDIRHHFIR+++E N++TLEH+ ++ QLADIFTK +DAN FE
Sbjct: 585 LSAINISKNPIQHSRTKHIDIRHHFIRDLVEENVVTLEHVSTDEQLADIFTKAVDANQFE 644

Query: 122 HLHTRLGVC 131
            L  +LG+C
Sbjct: 645 KLRGKLGIC 653

[Close]

BLAST of Cmc07g0191781 vs. ExPASy TrEMBL
Match: A0A2Z6P936 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_401320 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.1e-48
Identity = 94/129 (72.87%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 2    FFLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMTLYCDN 61
            FFLGNNLIS FSKKQNC+SLSTAEAEYI A S+C+QL+W K ML EY  +QD+MTLYCDN
Sbjct: 1325 FFLGNNLISWFSKKQNCISLSTAEAEYITAGSSCSQLLWMKQMLKEYNVEQDVMTLYCDN 1384

Query: 62   MSAIGISKNPVQHSRTKHIDIRHHFIREIIENNIITLEHIRSNLQLADIFTKPLDANTFE 121
            +SAI ISKNP+QHSRTKHIDIRHHFIR ++E  +ITLEH+ ++ QLADIFTK LDA  FE
Sbjct: 1385 LSAINISKNPIQHSRTKHIDIRHHFIRGLVEEKVITLEHVTTDEQLADIFTKALDAVQFE 1444

Query: 122  HLHTRLGVC 131
             L ++LGVC
Sbjct: 1445 KLRSKLGVC 1453

[Close]

BLAST of Cmc07g0191781 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 67.8 bits (164), Expect = 7.5e-12
Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 3   FLGNNLISSFSKKQNCVSLSTAEAEYIVAESACTQLIWKKNMLHEYGFKQDIMT-LYCDN 62
           FLG +LIS  SKKQ  VS S+AEAEY     A  +++W      E        T L+CDN
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525

Query: 63  MSAIGISKNPVQHSRTKHIDIRHHFIRE 90
            +AI I+ N V H RTKHI+   H +RE
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:

BLAST of Cmc07g0191781 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055610.1	2.2e-53	80.77	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [...	[more]
KAA0048308.1	1.5e-49	80.16	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK10653.1 gag-pol polyprotein [...	[more]
MCH79363.1	4.7e-48	71.32	gag-pol polyprotein [Trifolium medium]	[more]
MCH79563.1	8.0e-48	71.32	gag-pol polyprotein [Trifolium medium]	[more]
AAO73529.1	1.0e-47	72.09	gag-pol polyprotein [Glycine max]	[more]

BLAST of Cmc07g0191781 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.1e-23	44.63	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.1e-22	45.16	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	8.1e-19	38.17	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.0e-18	37.40	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q12113	8.7e-05	28.23	Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]

BLAST of Cmc07g0191781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLL1	1.1e-53	80.77	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G...	[more]
A0A5A7TZB3	7.1e-50	80.16	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G0...	[more]
A0A392LWM0	2.3e-48	71.32	Gag-pol polyprotein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0000112 PE=...	[more]
A0A392LX79	3.9e-48	71.32	Gag-pol polyprotein OS=Trifolium medium OX=97028 GN=A2U01_0000314 PE=4 SV=1	[more]
A0A2Z6P936	5.1e-48	72.87	Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ...	[more]

BLAST of Cmc07g0191781 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.5e-12	45.45	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF355	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 11..130
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 11..130
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1..115 e-value: 2.13577E-54 score: 165.334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0191781.1	Cmc07g0191781.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0052923	all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding