Homology
BLAST of Cmc07g0190911 vs. NCBI nr
Match:
TYK29027.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 497.7 bits (1280), Expect = 6.5e-137
Identity = 244/260 (93.85%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM VELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 232 MCGSKSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 291
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 292 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 351
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 352 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 411
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 412 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 471
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 472 ESGYYIKALRSDRGGEFTSN 491
BLAST of Cmc07g0190911 vs. NCBI nr
Match:
TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 497.3 bits (1279), Expect = 8.6e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. NCBI nr
Match:
KAA0047979.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 497.3 bits (1279), Expect = 8.6e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. NCBI nr
Match:
TYJ96309.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 497.3 bits (1279), Expect = 8.6e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. NCBI nr
Match:
TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 497.3 bits (1279), Expect = 8.6e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 6.6e-31
Identity = 84/242 (34.71%), Postives = 136/242 (56.20%), Query Frame = 0
Query: 17 GDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNILSLGKLLEKGYNILMK 76
G + G+++ + G I I G + +V +VP+++ N++S L GY
Sbjct: 320 GTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFA 379
Query: 77 DYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDPNWIWHLRFGHLNFDGL 136
+ + + +IAK + + ++ N + + + + +WH R GH++ GL
Sbjct: 380 NQKWRLTKG-SLVIAK-GVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGL 439
Query: 137 RLLARKNMVKGLPYVKHPD-QLCEGCLHGKQSRKSFPQESSSRARRQLELVHTDLFGPIK 196
++LA+K+++ Y K + C+ CL GKQ R SF Q SS R L+LV++D+ GP++
Sbjct: 440 QILAKKSLIS---YAKGTTVKPCDYCLFGKQHRVSF-QTSSERKLNILDLVYSDVCGPME 499
Query: 197 PSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEKESGYYIKALRSDRGG 256
S G N YF+ FIDD SRK WVY +K K +VF +F++F ALVE+E+G +K LRSD GG
Sbjct: 500 IESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGG 555
Query: 257 EF 258
E+
Sbjct: 560 EY 555
BLAST of Cmc07g0190911 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 110.2 bits (274), Expect = 3.9e-23
Identity = 76/266 (28.57%), Postives = 131/266 (49.25%), Query Frame = 0
Query: 12 DESVGGDIVFGDST------KISVKEKGKI-------LINLKNGKHEFISNVYYVPNMKN 71
D + + ++ DS KI+V ++G+ ++ L+N + +V +
Sbjct: 297 DHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAG 356
Query: 72 NILSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLK 131
N++S+ +L E G +I D S + + ++ K N + ++N Q A + + K
Sbjct: 357 NLMSVKRLQEAGMSIEF-DKSGVTISKNGLMVVKNSGMLNNVPVINFQ---AYSINAKHK 416
Query: 132 DPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPD---QLCEGCLHGKQSRKSFPQ-E 191
+ +WH RFGH++ L + RKNM + + + ++CE CL+GKQ+R F Q +
Sbjct: 417 NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLK 476
Query: 192 SSSRARRQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRF 251
+ +R L +VH+D+ GPI P + NYF++F+D F+ Y +K KS VF MF+ F
Sbjct: 477 DKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDF 536
Query: 252 KALVEKESGYYIKALRSDRGGEFQMN 261
A E + L D G E+ N
Sbjct: 537 VAKSEAHFNLKVVYLYIDNGREYLSN 558
BLAST of Cmc07g0190911 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 2.4e-17
Identity = 71/255 (27.84%), Postives = 122/255 (47.84%), Query Frame = 0
Query: 16 GGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNILSLGKLLE-KGYNIL 75
G D++ D + I + G ++ K+ + + N+ YVPN+ N++S+ +L G ++
Sbjct: 357 GDDVMVADGSTIPISHTGSTSLSTKS-RPLNLHNILYVPNIHKNLISVYRLCNANGVSVE 416
Query: 76 MKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTD--VAKCLKSCLKDPNWIWHLRFGHLN 135
SF ++D + + TK+ ++ I + V+ K + WH R GH
Sbjct: 417 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPA 476
Query: 136 FDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRARRQLELVHTDLF- 195
L + N + H C CL K ++ F Q S+ + R LE +++D++
Sbjct: 477 PSILNSVI-SNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQ-STINSTRPLEYIYSDVWS 536
Query: 196 GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEKESGYYIKALRS 255
PI S Y+++F+D F+R TW+Y +K+KS+V + F FK L+E I S
Sbjct: 537 SPI--LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYS 596
Query: 256 DRGGEFQMNSKLFTQ 267
D GGEF + F+Q
Sbjct: 597 DNGGEFVALWEYFSQ 606
BLAST of Cmc07g0190911 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 2.4e-17
Identity = 70/248 (28.23%), Postives = 118/248 (47.58%), Query Frame = 0
Query: 16 GGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNILSLGKLLEKG-YNIL 75
G D++ D + I + G + + + ++ V YVPN+ N++S+ +L ++
Sbjct: 336 GDDVMIADGSTIPITHTGSASLPTSSRSLD-LNKVLYVPNIHKNLISVYRLCNTNRVSVE 395
Query: 76 MKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTD--VAKCLKSCLKDPNWIWHLRFGHLN 135
SF ++D + + TK+ ++ I + V+ C K + WH R GH
Sbjct: 396 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGH-- 455
Query: 136 FDGLRLLARKNMVKGLPYVKHPDQL--CEGCLHGKQSRKSFPQESSSRARRQLELVHTDL 195
L +L LP + +L C C K + F S+ + + LE +++D+
Sbjct: 456 -PSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPF-SNSTITSSKPLEYIYSDV 515
Query: 196 F-GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEKESGYYIKAL 255
+ PI S Y+++F+D F+R TW+Y +K+KS+V D F FK+LVE I L
Sbjct: 516 WSSPI--LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTL 575
Query: 256 RSDRGGEF 258
SD GGEF
Sbjct: 576 YSDNGGEF 576
BLAST of Cmc07g0190911 vs. ExPASy Swiss-Prot
Match:
Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 4.4e-11
Identity = 67/275 (24.36%), Postives = 119/275 (43.27%), Query Frame = 0
Query: 18 DIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNILSLGKLLEKGY------ 77
+IV I + G + N +NG I + PN+ ++LSL +L +
Sbjct: 481 NIVDAQKQDIPINAIGNLHFNFQNGTKTSI-KALHTPNIAYDLLSLSELANQNITACFTR 540
Query: 78 NILMKD----YSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDPNWIWHLR 137
N L + + +++ ++K + + I L I +V K KS K P + H
Sbjct: 541 NTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHISKLTI-NNVNKS-KSVNKYPYPLIHRM 600
Query: 138 FGHLNFDGLRLLARKNMVKGLPYVKHPD--------QLCEGCLHGKQSRKSFPQESSSRA 197
GH NF ++ +KN V Y+K D C CL GK ++ + S +
Sbjct: 601 LGHANFRSIQKSLKKNAV---TYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKY 660
Query: 198 RRQLE---LVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFV--KEKSKVFDMFKRF 257
+ E +HTD+FGP+ +YF+ F D+ +R WVY + + + + ++F
Sbjct: 661 QESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSI 720
Query: 258 KALVEKESGYYIKALRSDRGGEFQMNS--KLFTQK 268
A ++ + + ++ DRG E+ + K FT +
Sbjct: 721 LAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNR 749
BLAST of Cmc07g0190911 vs. ExPASy TrEMBL
Match:
A0A5D3DYS0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001400 PE=4 SV=1)
HSP 1 Score: 497.7 bits (1280), Expect = 3.2e-137
Identity = 244/260 (93.85%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM VELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 232 MCGSKSMFVELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 291
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 292 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 351
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 352 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 411
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 412 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 471
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 472 ESGYYIKALRSDRGGEFTSN 491
BLAST of Cmc07g0190911 vs. ExPASy TrEMBL
Match:
A0A5A7V3X9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003030 PE=4 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. ExPASy TrEMBL
Match:
A0A5A7SJX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002010 PE=4 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. ExPASy TrEMBL
Match:
A0A5A7V308 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00290 PE=4 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. ExPASy TrEMBL
Match:
A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137
Identity = 243/260 (93.46%), Postives = 249/260 (95.77%), Query Frame = 0
Query: 1 MCGSKSMLVELDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNI 60
MCGSKSM +ELDESVGGDIVFGD+TKI VK KGKILINLKNGKHEFISNVYYVPNMKNNI
Sbjct: 332 MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNI 391
Query: 61 LSLGKLLEKGYNILMKDYSFLIRDNHDKIIAKVQMTKNRIFLLNIQTDVAKCLKSCLKDP 120
LSLG+LLEKGYNILMKDYS LIRDNHDKIIAKVQMTKNR+FLLNIQTDVA+CLKSCLKDP
Sbjct: 392 LSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDP 451
Query: 121 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFPQESSSRAR 180
NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK PDQLCEGCLHGKQSRKSFPQESS RAR
Sbjct: 452 NWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRAR 511
Query: 181 RQLELVHTDLFGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSKVFDMFKRFKALVEK 240
R LELVHTDL GPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKS+VF MFKRFKALVEK
Sbjct: 512 RPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEK 571
Query: 241 ESGYYIKALRSDRGGEFQMN 261
ESGYYIKALRSDRGGEF N
Sbjct: 572 ESGYYIKALRSDRGGEFTSN 591
BLAST of Cmc07g0190911 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0
Query: 113 LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQSRKSFP 172
L KD +WH R H++ G+ LL +K + + CE C++GK R +F
Sbjct: 61 LAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSL--KFCEDCIYGKTHRVNF- 120
Query: 173 QESSSRARRQLELVHTDLFG-PIKPSSF 200
+ L+ VH+DL+G P P SF
Sbjct: 121 STGQHTTKNPLDYVHSDLWGAPSVPLSF 145
BLAST of Cmc07g0190911 vs. TAIR 10
Match:
AT3G21000.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 48.9 bits (115), Expect = 7.5e-06
Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 11 LDESVGGDIVFGDSTKISVKEKGKILINLKNGKHEFISNVYYVPNMKNNILSLGKLLEKG 70
LD + + D T + V+ KG + I +K GK + I NV +VP + N+LS GK++ K
Sbjct: 300 LDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKR 359
Query: 71 YNI 74
Y+I
Sbjct: 360 YSI 362
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK29027.1 | 6.5e-137 | 93.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK18362.1 | 8.6e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0047979.1 | 8.6e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYJ96309.1 | 8.6e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK06895.1 | 8.6e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 6.6e-31 | 34.71 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 3.9e-23 | 28.57 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 2.4e-17 | 27.84 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.4e-17 | 28.23 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q12491 | 4.4e-11 | 24.36 | Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DYS0 | 3.2e-137 | 93.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7V3X9 | 4.1e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7SJX6 | 4.1e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7V308 | 4.1e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3D497 | 4.1e-137 | 93.46 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00300.1 | 2.0e-06 | 31.82 | Gag-Pol-related retrotransposon family protein | [more] |
AT3G21000.1 | 7.5e-06 | 38.10 | Gag-Pol-related retrotransposon family protein | [more] |