Cmc07g0189601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 8330994 .. 8332894 (-)
RNA-Seq Expression	Cmc07g0189601
Synteny	Cmc07g0189601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGCCAACAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGTTGATGTGTCCTTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGTTGGAGTCGAGTATGGTTCCTATATCTAGAGCTTCACACAGAATGGCCCCAATAGAATTGAAAGAGCTAAAAGTGCAGTTACAGGAGTTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCACCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGAGAGCTACAGTATTCTCTAAGATCGATCTTCGATCGGGATATCATCAGCTGAGGATTAGGATAAGGATGTACCGAAGACAGCCTTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTCGGTTTAACGAATGCTCCGGTAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGAGTTCCTGGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCAAGCATGAGGAGTATTTACGTAGGGTTCTACAAACCCTTCGAGACAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTAAAGTAGGTATCCTTTCTCGGCCATATGGTTTCTAAGGCTGGAGTTTCTATGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACGGTCAGTAAGATTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACATGTTGTGGAGAACTTTTCCCGTAAAGCTACTCCTCTTACTCAGTTGACCAGGAAGGAAGCTCCTTTTGTTTGGAACAAGGCATGTGAGGAGAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGATTCTTACTATACCTGATGGTTCAGGGAGTTTTGTGATTTACGGTGATGCTTCTAAGAAGGGCTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTAGAGTTGGCATGAGCAGAATTACCCTACACATGATTTAGAGTTGGCAGCAATAGTTTTTGCACTGAAGATATGGAGGCACTACTTGTATGGTGAAAAGATACAGAGCTTCACGGATCATAAGAGCTTGAAATATTTCTTTACTCAGAAGGAATTGAGTATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTATATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACGAGACAGGCCCCATTGCATCGAGATTTTGAGAGGGTTGAGATTGCAGTGTCAGTAGGGGCAGTCACCATGCAGTTAGCCCAGTTGACGGTTGAGCCGTCTTTGAGGCAGAAGATCATTAATGCTCAGAGTCACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGTAGAGGTGGGGCAAGCTATTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATATGAGGCTCACAGTTCTCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAACGGGTTTATTGGTGGTGTGATATGAAGAGAGAGGTGGTAGAATTTTTTAGTAAATGCTTGGTGTGTCTGCAGGTTAATGCACAAGGCAGAAACCAGCGGGTTTATTACAACCCTTAA

mRNA sequence

ATGAGGGCCAACAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGTTGATGTGTCCTTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGTTGGAGTCGAGTATGGTTCCTATATCTAGAGCTTCACACAGAATGGCCCCAATAGAATTGAAAGAGCTAAAAGTGCAGTTACAGGAGTTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCACCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGAGAGCTACAGTATTCTCTAAGATCGATCTTCGATCGGGATATCATCAGCTGAGGATTAGGATAAGGATGTACCGAAGACAGCCTTTCGTTCCAGATATGGACACTATGAGTTTATTAGTGTTTAAGGAGTTCCTGGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCAAGCATGAGGAGTATTTACGTAGGGTATCCTTTCTCGGCCATATGGTTTCTAAGGCTGGAGTTTCTATGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACGGTCAGTAAGATTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACATGTTGTGGAGAACTTTTCCCGTAAAGCTACTCCTCTTACTCAGTTGACCAGGAAGGAAGCTCCTTTTGTTTGGAACAAGGCATGTGAGGAGAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGATTCTTACTATACCTGATGGTTCAGGGAGTTTTGTGATTTACGGTGATGCTTCTAAGAAGGGCTTGGGTTGTGTATTGATGCAGCAAGGTAAGAAGGAATTGAGTATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTATATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACGAGACAGGCCCCATTGCATCGAGATTTTGAGAGGGTTGAGATTGCAGTGTCAGTAGGGGCAGTCACCATGCAGTTAGCCCAGTTGACGGTTGAGCCGTCTTTGAGGCAGAAGATCATTAATGCTCAGAGTCACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGTAGAGGTGGGGCAAGCTATTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATATGAGGCTCACAGTTCTCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAACGGGTTTATTGGTGGTGTGATATGAAGAGAGAGGTGGTAGAATTTTTTAGTAAATGCTTGGTGTGTCTGCAGGTTAATGCACAAGGCAGAAACCAGCGGGTTTATTACAACCCTTAA

Coding sequence (CDS)

ATGAGGGCCAACAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGTTGATGTGTCCTTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGTTGGAGTCGAGTATGGTTCCTATATCTAGAGCTTCACACAGAATGGCCCCAATAGAATTGAAAGAGCTAAAAGTGCAGTTACAGGAGTTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCACCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGAGAGCTACAGTATTCTCTAAGATCGATCTTCGATCGGGATATCATCAGCTGAGGATTAGGATAAGGATGTACCGAAGACAGCCTTTCGTTCCAGATATGGACACTATGAGTTTATTAGTGTTTAAGGAGTTCCTGGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCAAGCATGAGGAGTATTTACGTAGGGTATCCTTTCTCGGCCATATGGTTTCTAAGGCTGGAGTTTCTATGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACGGTCAGTAAGATTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACATGTTGTGGAGAACTTTTCCCGTAAAGCTACTCCTCTTACTCAGTTGACCAGGAAGGAAGCTCCTTTTGTTTGGAACAAGGCATGTGAGGAGAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGATTCTTACTATACCTGATGGTTCAGGGAGTTTTGTGATTTACGGTGATGCTTCTAAGAAGGGCTTGGGTTGTGTATTGATGCAGCAAGGTAAGAAGGAATTGAGTATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTATATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACGAGACAGGCCCCATTGCATCGAGATTTTGAGAGGGTTGAGATTGCAGTGTCAGTAGGGGCAGTCACCATGCAGTTAGCCCAGTTGACGGTTGAGCCGTCTTTGAGGCAGAAGATCATTAATGCTCAGAGTCACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGTAGAGGTGGGGCAAGCTATTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATATGAGGCTCACAGTTCTCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAACGGGTTTATTGGTGGTGTGATATGAAGAGAGAGGTGGTAGAATTTTTTAGTAAATGCTTGGTGTGTCTGCAGGTTAATGCACAAGGCAGAAACCAGCGGGTTTATTACAACCCTTAA

Protein sequence

MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIRIRMYRRQPFVPDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLRRVSFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQGKKELSMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERRLCVPSDSAVKTELLYEAHSSPFSMHPGSTKMYQDLKRVYWWCDMKREVVEFFSKCLVCLQVNAQGRNQRVYYNP

Homology

[Close]

BLAST of Cmc07g0189601 vs. NCBI nr
Match: KAA0036553.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 875.2 bits (2260), Expect = 3.0e-250
Identity = 460/603 (76.29%), Postives = 487/603 (80.76%), Query Frame = 0


Query: 1   MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
           +RA+KLLSQGTW ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 394 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 453

Query: 61  ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 454 EPDTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 513

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIR---------IRMY 180
           DYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRI+            Y
Sbjct: 514 DYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 573

Query: 181 RRQPFV-----------PDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLRRV 240
               F+             MD M+  VF+EFLDTFVIVFIDDILIYSKTEA+HEE+LR V
Sbjct: 574 GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIV 633

Query: 241 SFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQ 300
           SFLGH+VSKAGVS+DPAKIEAVT W RPSTVS+ RSFLGLAGYYR  VENFS  ATPLTQ
Sbjct: 634 SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIATPLTQ 693

Query: 301 LTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQGK 360
           LTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGSGSFVIY DASKKGLGCVLMQQGK
Sbjct: 694 LTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK 753

Query: 361 ---------------------------------------------------------KEL 420
                                                                    KEL
Sbjct: 754 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL 813

Query: 421 SMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAV 480
           +MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ER EIAV
Sbjct: 814 NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV 873

Query: 481 SVGAVTMQLAQLTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERR 527
           SVGAVTMQLAQLTV+P+LRQ+II+AQS+DPYLVEKRGL E GQA+EFS+SSDGGLLFERR
Sbjct: 874 SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR 933

[Close]

BLAST of Cmc07g0189601 vs. NCBI nr
Match: KAA0060839.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 867.8 bits (2241), Expect = 4.7e-248
Identity = 453/572 (79.20%), Postives = 482/572 (84.27%), Query Frame = 0


Query: 1   MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
           +RA+KLLSQGTWSILAS+VDTREV VSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 271 IRASKLLSQGTWSILASMVDTREVGVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 330

Query: 61  ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 331 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 390

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIRIRMYRRQPF---- 180
           DYRELNKVT+K RYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRI+     +  F    
Sbjct: 391 DYRELNKVTIKKRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 450

Query: 181 ----------------VPDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLRRV 240
                           V  MD M+  VF+EFLDTFVIVFIDDIL+YSKTEA+HEE+LR  
Sbjct: 451 GHYEFIVMSFGLTNAPVVFMDLMN-RVFREFLDTFVIVFIDDILLYSKTEAEHEEHLR-- 510

Query: 241 SFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQ 300
               H+VSKAGVS+DPAKIEAVTSW RPSTVS++RSFLGLAGYYR  VENFSR ATPLTQ
Sbjct: 511 ----HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQ 570

Query: 301 LTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQGK 360
           LTRK APFVW+KACE+SFQNLKQKLVTAP+LTIPDGSGSFVIY DASKKGLGCV MQQGK
Sbjct: 571 LTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTIPDGSGSFVIYSDASKKGLGCVSMQQGK 630

Query: 361 --------------------------KELSMRQRRWLELVKDYDCEILYHPGKANVVADA 420
                                     KEL+MRQRRWLELVKDYDCEILYHPGKANVVADA
Sbjct: 631 VVAYASRQLKSHEQNYPTHDLELAAVKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 690

Query: 421 LSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVEPSLRQKIINAQSHDPY 480
           LSRKVSHSAALITRQAPLHRD ER EIAVSVGAVTMQLAQLTV+P+LRQ+II+AQ +DPY
Sbjct: 691 LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPY 750

Query: 481 LVEKRGLVEVGQAIEFSISSDGGLLFERRLCVPSDSAVKTELLYEAHSSPFSMHPGSTKM 527
           LVEKRGL E GQA+EFSISSDGGLLFERRLCVPSDSAVKTELL EAHSSPFSMHPGSTKM
Sbjct: 751 LVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 810

[Close]

BLAST of Cmc07g0189601 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 865.1 bits (2234), Expect = 3.1e-247
Identity = 459/626 (73.32%), Postives = 488/626 (77.96%), Query Frame = 0


Query: 1    MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
            +RA+KLLSQGTW ILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 541  IRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIEL 600

Query: 61   ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 601  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 660

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIRIRMYRRQPF---- 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRI+     +  F    
Sbjct: 661  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 720

Query: 181  ----------------VPDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLR-- 240
                               MD M+  VF+EFLDTFVIVFIDDILIYSKTE +HEE+LR  
Sbjct: 721  GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMV 780

Query: 241  ---------------------RVSFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSF 300
                                 +VSFLGH+VSKAGVS+DPAKIEAVT W RPSTVS++RSF
Sbjct: 781  LQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF 840

Query: 301  LGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGS 360
            LGLAGYYR  VENFSR ATPLTQLTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGS
Sbjct: 841  LGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 900

Query: 361  GSFVIYGDASKKGLGCVLMQQGK------------------------------------- 420
            GSFVIY DASKKGLGCVLMQQGK                                     
Sbjct: 901  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL 960

Query: 421  --------------------KELSMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 480
                                KEL+MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
Sbjct: 961  YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 1020

Query: 481  HSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVEPSLRQKIINAQSHDPYLVEKRG 527
            HSAALITRQAPLHRD ER EIAVSVGAVTMQLAQLTV+P+LRQ+II+AQS+DPYLVEKRG
Sbjct: 1021 HSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRG 1080

[Close]

BLAST of Cmc07g0189601 vs. NCBI nr
Match: KAA0047433.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 864.4 bits (2232), Expect = 5.2e-247
Identity = 454/588 (77.21%), Postives = 485/588 (82.48%), Query Frame = 0


Query: 1    MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
            +RA+KLLSQGTW ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 990  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 1049

Query: 61   ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 1050 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1109

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIR---------IRMY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRI+            Y
Sbjct: 1110 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 1169

Query: 181  RRQPFV-----------PDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLR-- 240
                F+             MD M+  VF+EFLDTFVIVFIDDILIYSKTEA+HEE+LR  
Sbjct: 1170 GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIV 1229

Query: 241  ---------------------RVSFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSF 300
                                 +VSFLGH+VSKAGVS+DPAKIEAVT W RPSTVS++RSF
Sbjct: 1230 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF 1289

Query: 301  LGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGS 360
            LGLAGYYR  VENFSR ATPLTQLTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGS
Sbjct: 1290 LGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 1349

Query: 361  GSFVIYGDASKKGLGCVLMQQGK------KELSMRQ-------------RRWLELVKDYD 420
            GSFVIY DASKKGLGCVLMQQGK      ++L   +             RRWLELVKDYD
Sbjct: 1350 GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVRRWLELVKDYD 1409

Query: 421  CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVE 480
            CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ER EIAVSVG VTMQLAQLTV+
Sbjct: 1410 CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGPVTMQLAQLTVQ 1469

Query: 481  PSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERRLCVPSDSAVKTELLY 527
            P+LRQ+II+AQ +DPYLVEKRGL E GQA+EFSISSDGGLLFERRLCVPSDSAVKTELL 
Sbjct: 1470 PTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLS 1529

[Close]

BLAST of Cmc07g0189601 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 863.2 bits (2229), Expect = 1.2e-246
Identity = 458/626 (73.16%), Postives = 487/626 (77.80%), Query Frame = 0


Query: 1   MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
           +RA+KLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 25  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 84

Query: 61  ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 85  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 144

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIRIRMYRRQPF---- 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSG HQLRI+     +  F    
Sbjct: 145 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRY 204

Query: 181 ----------------VPDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLR-- 240
                              MD M+  VF+EFLDTFVIVFIDDILIYSKTEA+HEE+LR  
Sbjct: 205 GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV 264

Query: 241 ---------------------RVSFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSF 300
                                +VSFLGH+VSKAGVS+DPAKIEAVT W RPSTVS++RSF
Sbjct: 265 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF 324

Query: 301 LGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGS 360
           LGLAGYYR  VENFSR ATPLTQLTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGS
Sbjct: 325 LGLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 384

Query: 361 GSFVIYGDASKKGLGCVLMQQGK------------------------------------- 420
           GSFVIY DASKKGLGCVLMQQGK                                     
Sbjct: 385 GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL 444

Query: 421 --------------------KELSMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 480
                               KEL+MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
Sbjct: 445 YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 504

Query: 481 HSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVEPSLRQKIINAQSHDPYLVEKRG 527
           HSAALITRQAPLHRD ER EIAVSVGAVTMQLAQLTV+P+LRQ+II+AQS+DPYLVEKRG
Sbjct: 505 HSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRG 564

[Close]

BLAST of Cmc07g0189601 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.0e-49
Identity = 146/602 (24.25%), Postives = 266/602 (44.19%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPW 102
           E+LP   P + +EF +EL      +   ++ + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIRIRMYRRQPFVPDMDTMSLLV-----------FKEFLDTF--------VIVFIDDI 222
            +R+R     +  F         LV           F+ F++T         V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAKHEEYLR-----------------------RVSFLGHMVSKAGVSMDPAKIE 282
           LI+SK+E++H ++++                       +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQN 342
            V  W +P    ++R FLG   Y R  +   S+   PL  L +K+  + W     ++ +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQ---------------------- 402
           +KQ LV+ P+L   D S   ++  DAS   +G VL Q+                      
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 ---GKKEL-----------------------------------------SMRQRRWLELV 462
                KE+                                         + R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 463 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQ 522
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 523 LTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERR--LCVPSDSAV 535
           +++    + +++   ++D  L+    L    + +E +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc07g0189601 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.0e-49
Identity = 146/602 (24.25%), Postives = 266/602 (44.19%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPW 102
           E+LP   P + +EF +EL      +   ++ + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIRIRMYRRQPFVPDMDTMSLLV-----------FKEFLDTF--------VIVFIDDI 222
            +R+R     +  F         LV           F+ F++T         V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAKHEEYLR-----------------------RVSFLGHMVSKAGVSMDPAKIE 282
           LI+SK+E++H ++++                       +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQN 342
            V  W +P    ++R FLG   Y R  +   S+   PL  L +K+  + W     ++ +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQ---------------------- 402
           +KQ LV+ P+L   D S   ++  DAS   +G VL Q+                      
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 ---GKKEL-----------------------------------------SMRQRRWLELV 462
                KE+                                         + R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 463 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQ 522
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 523 LTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERR--LCVPSDSAV 535
           +++    + +++   ++D  L+    L    + +E +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc07g0189601 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.0e-49
Identity = 146/602 (24.25%), Postives = 266/602 (44.19%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPW 102
           E+LP   P + +EF +EL      +   ++ + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIRIRMYRRQPFVPDMDTMSLLV-----------FKEFLDTF--------VIVFIDDI 222
            +R+R     +  F         LV           F+ F++T         V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAKHEEYLR-----------------------RVSFLGHMVSKAGVSMDPAKIE 282
           LI+SK+E++H ++++                       +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQN 342
            V  W +P    ++R FLG   Y R  +   S+   PL  L +K+  + W     ++ +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQ---------------------- 402
           +KQ LV+ P+L   D S   ++  DAS   +G VL Q+                      
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 ---GKKEL-----------------------------------------SMRQRRWLELV 462
                KE+                                         + R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 463 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQ 522
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 523 LTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERR--LCVPSDSAV 535
           +++    + +++   ++D  L+    L    + +E +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc07g0189601 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.0e-49
Identity = 146/602 (24.25%), Postives = 266/602 (44.19%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPW 102
           E+LP   P + +EF +EL      +   ++ + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIRIRMYRRQPFVPDMDTMSLLV-----------FKEFLDTF--------VIVFIDDI 222
            +R+R     +  F         LV           F+ F++T         V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAKHEEYLR-----------------------RVSFLGHMVSKAGVSMDPAKIE 282
           LI+SK+E++H ++++                       +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQN 342
            V  W +P    ++R FLG   Y R  +   S+   PL  L +K+  + W     ++ +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQ---------------------- 402
           +KQ LV+ P+L   D S   ++  DAS   +G VL Q+                      
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 ---GKKEL-----------------------------------------SMRQRRWLELV 462
                KE+                                         + R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 463 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQ 522
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 523 LTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERR--LCVPSDSAV 535
           +++    + +++   ++D  L+    L    + +E +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc07g0189601 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.0e-49
Identity = 146/602 (24.25%), Postives = 266/602 (44.19%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPW 102
           E+LP   P + +EF +EL      +   ++ + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIRIRMYRRQPFVPDMDTMSLLV-----------FKEFLDTF--------VIVFIDDI 222
            +R+R     +  F         LV           F+ F++T         V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAKHEEYLR-----------------------RVSFLGHMVSKAGVSMDPAKIE 282
           LI+SK+E++H ++++                       +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQN 342
            V  W +P    ++R FLG   Y R  +   S+   PL  L +K+  + W     ++ +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQ---------------------- 402
           +KQ LV+ P+L   D S   ++  DAS   +G VL Q+                      
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 ---GKKEL-----------------------------------------SMRQRRWLELV 462
                KE+                                         + R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 463 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQ 522
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 523 LTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERR--LCVPSDSAV 535
           +++    + +++   ++D  L+    L    + +E +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc07g0189601 vs. ExPASy TrEMBL
Match: A0A5A7T0Y9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00570 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 1.4e-250
Identity = 460/603 (76.29%), Postives = 487/603 (80.76%), Query Frame = 0


Query: 1   MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
           +RA+KLLSQGTW ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 394 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 453

Query: 61  ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 454 EPDTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 513

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIR---------IRMY 180
           DYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRI+            Y
Sbjct: 514 DYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 573

Query: 181 RRQPFV-----------PDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLRRV 240
               F+             MD M+  VF+EFLDTFVIVFIDDILIYSKTEA+HEE+LR V
Sbjct: 574 GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIV 633

Query: 241 SFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQ 300
           SFLGH+VSKAGVS+DPAKIEAVT W RPSTVS+ RSFLGLAGYYR  VENFS  ATPLTQ
Sbjct: 634 SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIATPLTQ 693

Query: 301 LTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQGK 360
           LTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGSGSFVIY DASKKGLGCVLMQQGK
Sbjct: 694 LTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK 753

Query: 361 ---------------------------------------------------------KEL 420
                                                                    KEL
Sbjct: 754 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL 813

Query: 421 SMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAV 480
           +MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ER EIAV
Sbjct: 814 NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV 873

Query: 481 SVGAVTMQLAQLTVEPSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERR 527
           SVGAVTMQLAQLTV+P+LRQ+II+AQS+DPYLVEKRGL E GQA+EFS+SSDGGLLFERR
Sbjct: 874 SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR 933

[Close]

BLAST of Cmc07g0189601 vs. ExPASy TrEMBL
Match: A0A5A7V556 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00700 PE=4 SV=1)

HSP 1 Score: 867.8 bits (2241), Expect = 2.3e-248
Identity = 453/572 (79.20%), Postives = 482/572 (84.27%), Query Frame = 0


Query: 1   MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
           +RA+KLLSQGTWSILAS+VDTREV VSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 271 IRASKLLSQGTWSILASMVDTREVGVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 330

Query: 61  ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 331 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 390

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIRIRMYRRQPF---- 180
           DYRELNKVT+K RYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRI+     +  F    
Sbjct: 391 DYRELNKVTIKKRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 450

Query: 181 ----------------VPDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLRRV 240
                           V  MD M+  VF+EFLDTFVIVFIDDIL+YSKTEA+HEE+LR  
Sbjct: 451 GHYEFIVMSFGLTNAPVVFMDLMN-RVFREFLDTFVIVFIDDILLYSKTEAEHEEHLR-- 510

Query: 241 SFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKATPLTQ 300
               H+VSKAGVS+DPAKIEAVTSW RPSTVS++RSFLGLAGYYR  VENFSR ATPLTQ
Sbjct: 511 ----HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQ 570

Query: 301 LTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGSGSFVIYGDASKKGLGCVLMQQGK 360
           LTRK APFVW+KACE+SFQNLKQKLVTAP+LTIPDGSGSFVIY DASKKGLGCV MQQGK
Sbjct: 571 LTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTIPDGSGSFVIYSDASKKGLGCVSMQQGK 630

Query: 361 --------------------------KELSMRQRRWLELVKDYDCEILYHPGKANVVADA 420
                                     KEL+MRQRRWLELVKDYDCEILYHPGKANVVADA
Sbjct: 631 VVAYASRQLKSHEQNYPTHDLELAAVKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 690

Query: 421 LSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVEPSLRQKIINAQSHDPY 480
           LSRKVSHSAALITRQAPLHRD ER EIAVSVGAVTMQLAQLTV+P+LRQ+II+AQ +DPY
Sbjct: 691 LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPY 750

Query: 481 LVEKRGLVEVGQAIEFSISSDGGLLFERRLCVPSDSAVKTELLYEAHSSPFSMHPGSTKM 527
           LVEKRGL E GQA+EFSISSDGGLLFERRLCVPSDSAVKTELL EAHSSPFSMHPGSTKM
Sbjct: 751 LVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 810

[Close]

BLAST of Cmc07g0189601 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.5e-247
Identity = 459/626 (73.32%), Postives = 488/626 (77.96%), Query Frame = 0


Query: 1    MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
            +RA+KLLSQGTW ILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 541  IRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIEL 600

Query: 61   ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 601  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 660

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIRIRMYRRQPF---- 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRI+     +  F    
Sbjct: 661  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 720

Query: 181  ----------------VPDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLR-- 240
                               MD M+  VF+EFLDTFVIVFIDDILIYSKTE +HEE+LR  
Sbjct: 721  GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMV 780

Query: 241  ---------------------RVSFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSF 300
                                 +VSFLGH+VSKAGVS+DPAKIEAVT W RPSTVS++RSF
Sbjct: 781  LQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF 840

Query: 301  LGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGS 360
            LGLAGYYR  VENFSR ATPLTQLTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGS
Sbjct: 841  LGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 900

Query: 361  GSFVIYGDASKKGLGCVLMQQGK------------------------------------- 420
            GSFVIY DASKKGLGCVLMQQGK                                     
Sbjct: 901  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL 960

Query: 421  --------------------KELSMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 480
                                KEL+MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
Sbjct: 961  YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 1020

Query: 481  HSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVEPSLRQKIINAQSHDPYLVEKRG 527
            HSAALITRQAPLHRD ER EIAVSVGAVTMQLAQLTV+P+LRQ+II+AQS+DPYLVEKRG
Sbjct: 1021 HSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRG 1080

[Close]

BLAST of Cmc07g0189601 vs. ExPASy TrEMBL
Match: A0A5A7TV57 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00240 PE=4 SV=1)

HSP 1 Score: 864.4 bits (2232), Expect = 2.5e-247
Identity = 454/588 (77.21%), Postives = 485/588 (82.48%), Query Frame = 0


Query: 1    MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
            +RA+KLLSQGTW ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 990  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 1049

Query: 61   ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 1050 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1109

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIR---------IRMY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRI+            Y
Sbjct: 1110 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 1169

Query: 181  RRQPFV-----------PDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLR-- 240
                F+             MD M+  VF+EFLDTFVIVFIDDILIYSKTEA+HEE+LR  
Sbjct: 1170 GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIV 1229

Query: 241  ---------------------RVSFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSF 300
                                 +VSFLGH+VSKAGVS+DPAKIEAVT W RPSTVS++RSF
Sbjct: 1230 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF 1289

Query: 301  LGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGS 360
            LGLAGYYR  VENFSR ATPLTQLTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGS
Sbjct: 1290 LGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 1349

Query: 361  GSFVIYGDASKKGLGCVLMQQGK------KELSMRQ-------------RRWLELVKDYD 420
            GSFVIY DASKKGLGCVLMQQGK      ++L   +             RRWLELVKDYD
Sbjct: 1350 GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVRRWLELVKDYD 1409

Query: 421  CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVE 480
            CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ER EIAVSVG VTMQLAQLTV+
Sbjct: 1410 CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGPVTMQLAQLTVQ 1469

Query: 481  PSLRQKIINAQSHDPYLVEKRGLVEVGQAIEFSISSDGGLLFERRLCVPSDSAVKTELLY 527
            P+LRQ+II+AQ +DPYLVEKRGL E GQA+EFSISSDGGLLFERRLCVPSDSAVKTELL 
Sbjct: 1470 PTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLS 1529

[Close]

BLAST of Cmc07g0189601 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 5.7e-247
Identity = 458/626 (73.16%), Postives = 487/626 (77.80%), Query Frame = 0


Query: 1   MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIEL 60
           +RA+KLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIEL
Sbjct: 25  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 84

Query: 61  ESSMVPISRASHRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E   VPISRA +RMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 85  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 144

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQRATVFSKIDLRSGYHQLRIRIRMYRRQPF---- 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSG HQLRI+     +  F    
Sbjct: 145 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRY 204

Query: 181 ----------------VPDMDTMSLLVFKEFLDTFVIVFIDDILIYSKTEAKHEEYLR-- 240
                              MD M+  VF+EFLDTFVIVFIDDILIYSKTEA+HEE+LR  
Sbjct: 205 GHYEFIVMSFGLTNAPAVFMDLMN-RVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV 264

Query: 241 ---------------------RVSFLGHMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSF 300
                                +VSFLGH+VSKAGVS+DPAKIEAVT W RPSTVS++RSF
Sbjct: 265 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF 324

Query: 301 LGLAGYYRHVVENFSRKATPLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGS 360
           LGLAGYYR  VENFSR ATPLTQLTRK APFVW+KACE+SFQNLKQKLVTAP+LT+PDGS
Sbjct: 325 LGLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 384

Query: 361 GSFVIYGDASKKGLGCVLMQQGK------------------------------------- 420
           GSFVIY DASKKGLGCVLMQQGK                                     
Sbjct: 385 GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL 444

Query: 421 --------------------KELSMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 480
                               KEL+MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
Sbjct: 445 YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS 504

Query: 481 HSAALITRQAPLHRDFERVEIAVSVGAVTMQLAQLTVEPSLRQKIINAQSHDPYLVEKRG 527
           HSAALITRQAPLHRD ER EIAVSVGAVTMQLAQLTV+P+LRQ+II+AQS+DPYLVEKRG
Sbjct: 505 HSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRG 564

[Close]

BLAST of Cmc07g0189601 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 5.2e-19
Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = 0


Query: 219 RVSFLG--HMVSKAGVSMDPAKIEAVTSWPRPSTVSKIRSFLGLAGYYRHVVENFSRKAT 278
           ++++LG  H++S  GVS DPAK+EA+  WP P   +++R FLGL GYYR  V+N+ +   
Sbjct: 29  QIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVR 88

Query: 279 PLTQLTRKEAPFVWNKACEESFQNLKQKLVTAPILTIPDGSGSFV 322
           PLT+L +K +   W +    +F+ LK  + T P+L +PD    FV
Sbjct: 89  PLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc07g0189601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036553.1	3.0e-250	76.29	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060839.1	4.7e-248	79.20	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	3.1e-247	73.32	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0047433.1	5.2e-247	77.21	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	1.2e-246	73.16	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0189601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	8.0e-49	24.25	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	8.0e-49	24.25	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	8.0e-49	24.25	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	8.0e-49	24.25	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	8.0e-49	24.25	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0189601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0Y9	1.4e-250	76.29	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5A7V556	2.3e-248	79.20	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00700 PE...	[more]
A0A5A7T190	1.5e-247	73.32	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5A7TV57	2.5e-247	77.21	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UP94	5.7e-247	73.16	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]

BLAST of Cmc07g0189601 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.2e-19	40.95	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..161 e-value: 4.7E-44 score: 152.2 coord: 187..240 e-value: 7.8E-6 score: 27.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 241..321 e-value: 4.3E-29 score: 102.4
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..167 e-value: 4.7E-44 score: 152.2
None	No IPR available	GENE3D	1.10.340.70		coord: 444..526 e-value: 5.7E-15 score: 57.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 219..382 coord: 341..384
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..178
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 2..178
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 219..382 coord: 341..384
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..227 e-value: 1.45461E-51 score: 172.01
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 470..526 e-value: 3.6E-13 score: 49.4
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 290..341 e-value: 4.4E-14 score: 52.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..363

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0189601.1	Cmc07g0189601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding