Cmc07g0187251 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0187251
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description60S ribosomal protein L27
LocationCMiso1.1chr07: 5177278 .. 5181334 (+)
RNA-Seq ExpressionCmc07g0187251
SyntenyCmc07g0187251
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAGCCCATTTGACAAGCGAGGCCCAGAGTATATAGATGGACCAAGCCCAATTAAACACAAACAAGAACAAGCCCACTAATAATTTGAGGCCCATATCCAAATACAATTAGGGTTTCAGTCGAACCAATTATAAGTATTGTTTTAGGATTTACGATCTCGTCGTCTCAACAGAACTAAACGGTAATCAAAGCTCCAATCCATTGTAGAAATGGTGAAATTCATCAAGCCGAACAAAGCTGTTATTGTTCTCCAAGGCCGATTTGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTCATTCGCAAAGATTCAAAGAAAAAGACAGATAAAAAATCGAGAGTGAAAGCATTCATTAAGCTTGTGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAAAGTGTCGAAGGTTGCGGCGTCGAAGGAGATCAAAAAGAGATTGGAGGACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTCACCAAACTTAGGTTCTGAGGGTATTATTTCAAGTTTTGGAGGGCCTTTTTTTTTCTTTCTCTTGATTCAAATTGTGATGAACGATTTTTATTATGACGATGAATGAATGTGTTGATTTTCCTTTAGCTCTAAATGATTTTGAATCGCTCAACCTCATTTAAATTTCTCATATTTGGACCCAGATTCAATACCAATTGTTGATGAAAACAATAAGAATTTTAGAGGATCAAATAGTATTTATTAATAGCGATCACATATAATAGTAGTAGTACATCTAGGGAGATTAGGGAGATTCTTTCACATTGTTCTTTCATTAGTTTGATTCATTCAGTCTCTACTTTTGTTATATTCTATATGAAAAGTGGATCCCTTTTGTTATATTTGTAATCGTAATGAAATCTGCCACCAAATTTGTGATTAAAATGGCAATTCATTATAATTGATTCATCTCATAGTAGGATGAATAAGAATCTCATGCTTATATATTTATTTAGTTGAAACTTGAAATCTTGATAAAGAAGAAACGGACAATTAAAATTGAGATAATACACAAGCTCCAATTTGACTTTTCTGTTTATTCTTACTTATTCAGAAACAATTGGAGCAAACACTAAAATAGAACTCTCACTTCACACATTCACCTTGATGTTCATGTTCTTTTAAACAAACTTTTCGACATAATCTGCTTTGATCTGGTCGGGTTGGCTACTTCTGTTGAGATTTGAGTTCCTTCACCCTTTGTTCAGTATCCTTCAATGCTTTCCCATAGATTCTTATAATCTGAAAATAATACCATTTTAGAATTATAACAAATGCTCTCTCTACTATTCCAAAACCCATAAATTAGGATCACATCCCCCCTTCCCCCTCCCTAAACGTCAGTTTGTGCTTATGAAATTCTTTGATCAAAGATAATAAATTGATGGAAGGATTTTCTTTTGTAATATGGAAGGTACCTCATCAATTTCTTCAGGTTTGATACAGAAGGGAGGACTCATCGTTATAGTATCCCCAGAGACACGTACTAGCATTCCATATTTCTCACACCTTTCACCAAAATATGCAGCTACCCCTGGCACATTCAATGGAACCCCTTGTTAGAACAAATCTATAGACAATATTCGTTTTTCATGTAGTAAGAAACCTGCTATGTTCATCAAGTTATTACTCAACATGTATTTAATATGAAATGTGATGTTATATTTGGAAGTCCTTTTAACGATATGAGTTTAATTCACGGGACACACATAGACAACAAAAGTAGATTACTACCCCATTCAGTAGGAAACGGAGTGTTGGGTGATTTATTGTCGGTGAATTCTGTGCCTGAAATCAATCCGATCCCCCTTATCTGCAAAAAGATCAAACCAGGTGACATTCAAAGGTATTAGAGCACAACGAGAATGAAACAATTTCTCGAACTATACCTCTCCAATGATGGGACTGTTTTGGTAGGCTTTTATACCATCTTGAAACCTTGGAGCGAGGTTATTTACTACCTGAAGAATATTTCTCTCTCTACAAAAGGACATTGCACAATACCAAACACGAACACCAGAATGTTAGGTTACAGATATATAATATGTCAAGCAATAAAAAGTTAGTCATTCATATGTTCATAACCATGGAGGCCAACTAACGAAATATTCTTATGGTTGCAAGGTAGTCTTGAGGTTTGTCAACACTTGATTAACAAAATTAGAAAAGATTGAAGAAAAAAAAATCAAACATACTTGTATATCTTCAGTGTTTCAAGTGCCACAGCACATGCAACGGGATGTCCAGAATACGTAAATCCGTGGGCAAAATTACCTGAACAAAATGACAATCAATTTGTGTATACGAGTACGTTTTTGTTTGTGCCATAACTAACGTACCAAGCTTATTGCTTTGAGAGTGTATAACATCTGAAACTTCAGGACTGACAAGGACACCACCAATAGGAATGTATGCAGAAGAAAGAGCCTGCAAAGTTCAACGCCAAGAACAAGCTTTATTATGAAAATATCTTCTTCTCAGGCTATACACACTAAACAAGCTGTCTCGGTTCTTCAAATTAGCACAACTTCACTTCACCTTCGCTATTGATACCAAGTCTGGCTTAATATTGTATTTATCACATCCAAACATCGTCCCGAGCCTTCCAAAACCACAAATAACCTATGGCAGCGAAGAGGTTATAGGAGACTAGGTAAGAGAAGTGAAAGGTATGGAGGCAAATCATATTTGTATTACCTCATCTGCAATGAAAAGAACATCATATTTCTTCAGCACCGCTTGGACCTGCACATGGAATTGAAAATTAGCGAGTAATTTTGAACTTGTTCTTTTTATATTGTTACGAAGAATAGGAACTTTACTAGCACTCATGAGTATGCATCTAAATAAGAAACAAGTCAGTACGAGCATTTGATGTTTCAAACTTGTCAAGAAAGTAGTAGCTTACTTTATCAAAATATGTTGCAGGAGGAAGTATCACACCACCAGATCCTATAACGGGTTCGGCAATAAAGGCAGCAATCTGAAACAAACAAAGGTTTGAAATACTATAGATTGTTTACATATGTCAAATATTTGAATATTCAAGTCAGGTTTTGGGACATTACAGTTTCAGGTCCTTCCTTCAGGATAAGATTCTCCAAATTGTTTGCTAATCTCGTCGAAAATTCTTCCTCGGTTTCACCTGGCATATTATAGACACGTTGAGCAATATAAGGAAATGCTCTCAACTTTGATGTCCCATACAAATAACCGAGGTTGCACACAATTAAAATAGTTCAGTGACAACCAGGAAGATGATAGCGCCAGAAATGAGGACAGTCTGTGTGGAGGACAAATGGAACCGGAAGATCAAATTGTTGATGCAAAGCTGGAATACTACAATAAAATTTCCTCAGTTAATAGCGTTGCACAAGCAAGTAATAAAAACCTTTTGAAGTATTTCAAGATTTTCTTGACAAGATGTCTTTGATTATCTTCATACCCGGTAAGACTGGCTGCTACAAGTGTGGAACCATGGTACCTGAGATAGCAAAAATAGCAAGCCTTGGATGAGTGAAATGAGTGAAACATGTTTGATAAGAGCATCGGTTATTGAACATACCCTTTCAAACGAGAGATTATTTTCTTTTTTTTTGGTCGCCCCAGTGCATTATTATAATACCAGACCAGTTTTACCTACACGAGTTAGAAAATGACGTTATTCATATGATTTTACATCAAAGTAGCTAACCACATTGCAGACAAACGTCAATTGTGTTGAGTGAGCTATTGCAATTATGATCAATGCACAATTACATTCAGTTCAAATGGACACTTAATGATCTTAAATTAAGGTTTCATATTTACCTGACCTCTTTTCCTTCAGTAGTTGGCAAAAAGGTAATTATATTTTCAATAGTCAGAATATACATCTTACTGACATGATAACAATGCTGATTGAAGATGCAAAAAAGGC

mRNA sequence

TTAAGCCCATTTGACAAGCGAGGCCCAGAGTATATAGATGGACCAAGCCCAATTAAACACAAACAAGAACAAGCCCACTAATAATTTGAGGCCCATATCCAAATACAATTAGGGTTTCAGTCGAACCAATTATAAGTATTGTTTTAGGATTTACGATCTCGTCGTCTCAACAGAACTAAACGGTAATCAAAGCTCCAATCCATTGTAGAAATGGTGAAATTCATCAAGCCGAACAAAGCTGTTATTGTTCTCCAAGGCCGATTTGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTCATTCGCAAAGATTCAAAGAAAAAGACAGATAAAAAATCGAGAGTGAAAGCATTCATTAAGCTTGTGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAAAGTGTCGAAGGTTGCGGCGTCGAAGGAGATCAAAAAGAGATTGGAGGACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTCACCAAACTTAGGTTCTGAGGGTACCTCATCAATTTCTTCAGGTTTGATACAGAAGGGAGGACTCATCGTTATAGTATCCCCAGAGACACGTACTAGCATTCCATATTTCTCACACCTTTCACCAAAATATGCAGCTACCCCTGGCACATTCAATGGAACCCCTTGTTAGAACAAATCTATAGACAATATTCGTTTTTCATGTAGTAAGAAACCTGCTATGTTCATCAAGTTATTACTCAACATGTATTTAATATGAAATGTGATGTTATATTTGGAAGTCCTTTTAACGATATGAGTTTAATTCACGGGACACACATAGACAACAAAAGTAGATTACTACCCCATTCAGTAGGAAACGGAGTGTTGGGTGATTTATTGTCGGTGAATTCTGTGCCTGAAATCAATCCGATCCCCCTTATCTGCAAAAAGATCAAACCAGGTGACATTCAAAGGTATTAGAGCACAACGAGAATGAAACAATTTCTCGAACTATACCTCTCCAATGATGGGACTGTTTTGGTAGGCTTTTATACCATCTTGAAACCTTGGAGCGAGGTTATTTACTACCTGAAGAATATTTCTCTCTCTACAAAAGGACATTGCACAATACCAAACACGAACACCAGAATGTTAGGTTACAGATATATAATATGTCAAGCAATAAAAAGTTAGTCATTCATATGTTCATAACCATGGAGGCCAACTAACGAAATATTCTTATGGTTGCAAGGTAGTCTTGAGGTTTGTCAACACTTGATTAACAAAATTAGAAAAGATTGAAGAAAAAAAAATCAAACATACTTGTATATCTTCAGTGTTTCAAGTGCCACAGCACATGCAACGGGATGTCCAGAATACGTAAATCCGTGGGCAAAATTACCTGAACAAAATGACAATCAATTTGTGTATACGAGTACGTTTTTGTTTGTGCCATAACTAACGTACCAAGCTTATTGCTTTGAGAGTGTATAACATCTGAAACTTCAGGACTGACAAGGACACCACCAATAGGAATGTATGCAGAAGAAAGAGCCTGCAAAGTTCAACGCCAAGAACAAGCTTTATTATGAAAATATCTTCTTCTCAGGCTATACACACTAAACAAGCTGTCTCGGTTCTTCAAATTAGCACAACTTCACTTCACCTTCGCTATTGATACCAAGTCTGGCTTAATATTGTATTTATCACATCCAAACATCGTCCCGAGCCTTCCAAAACCACAAATAACCTATGGCAGCGAAGAGGTTATAGGAGACTAGGAGGAAGTATCACACCACCAGATCCTATAACGGGTTCGGCAATAAAGGCAGCAATCTGAAACAAACAAAGTTTCAGGTCCTTCCTTCAGGATAAGATTCTCCAAATTGTTTGCTAATCTCGTCGAAAATTCTTCCTCGGTTTCACCTGGCATATTATAGACACGTTGAGCAATATAAGGAAATGCTCTCAACTTTGATGTCCCATACAAATAACCGAGGTTGCACACAATTAAAATAGTTCAGTGACAACCAGGAAGATGATAGCGCCAGAAATGAGGACAGTCTGTGTGGAGGACAAATGGAACCGGAAGATCAAATTGTTGATGCAAAGCTGGAATACTACAATAAAATTTCCTCAGTTAATAGCGTTGCACAAGCAAGTAATAAAAACCTTTTGAAGTATTTCAAGATTTTCTTGACAAGATGTCTTTGATTATCTTCATACCCGGTAAGACTGGCTGCTACAAGTGTGGAACCATGGTACCTGAGATAGCAAAAATAGCAAGCCTTGGATGAGTGAAATGAGTGAAACATGTTTGATAAGAGCATCGGTTATTGAACATACCCTTTCAAACGAGAGATTATTTTCTTTTTTTTTGGTCGCCCCAGTGCATTATTATAATACCAGACCAGTTTTACCTACACGAGTTAGAAAATGACGTTATTCATATGATTTTACATCAAAGTAGCTAACCACATTGCAGACAAACGTCAATTGTGTTGAGTGAGCTATTGCAATTATGATCAATGCACAATTACATTCAGTTCAAATGGACACTTAATGATCTTAAATTAAGGTTTCATATTTACCTGACCTCTTTTCCTTCAGTAGTTGGCAAAAAGGTAATTATATTTTCAATAGTCAGAATATACATCTTACTGACATGATAACAATGCTGATTGAAGATGCAAAAAAGGC

Coding sequence (CDS)

ATGGTGAAATTCATCAAGCCGAACAAAGCTGTTATTGTTCTCCAAGGCCGATTTGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTCATTCGCAAAGATTCAAAGAAAAAGACAGATAAAAAATCGAGAGTGAAAGCATTCATTAAGCTTGTGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAAAGTGTCGAAGGTTGCGGCGTCGAAGGAGATCAAAAAGAGATTGGAGGACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTCACCAAACTTAGGTTCTGA

Protein sequence

MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Homology
BLAST of Cmc07g0187251 vs. NCBI nr
Match: XP_008464678.1 (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo] >KAA0032926.1 60S ribosomal protein L27-3-like [Cucumis melo var. makuwa] >TYK28074.1 60S ribosomal protein L27-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 5.4e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. NCBI nr
Match: XP_004145994.3 (60S ribosomal protein L27-3 [Cucumis sativus] >KAE8649796.1 hypothetical protein Csa_012871 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 9.3e-68
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKK
Sbjct: 1   MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVVRKDSKK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. NCBI nr
Match: XP_022940098.1 (60S ribosomal protein L27-3-like [Cucurbita moschata])

HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS K
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. NCBI nr
Match: KAG6608000.1 (60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS K
Sbjct: 78  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 137

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVN DCLQSKVSKVAASKEIKKRLEDR
Sbjct: 138 KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNADCLQSKVSKVAASKEIKKRLEDR 197

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 198 FKTGKNRWFFTKLRF 212

BLAST of Cmc07g0187251 vs. NCBI nr
Match: XP_011658974.2 (60S ribosomal protein L27 [Cucumis sativus] >KAE8646052.1 hypothetical protein Csa_015825 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 3.3e-65
Identity = 129/135 (95.56%), Postives = 134/135 (99.26%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT+KKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCLQS+VSKV+ASKEIKKRLE+R
Sbjct: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy Swiss-Prot
Match: P51419 (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-57
Identity = 108/135 (80.00%), Postives = 122/135 (90.37%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGR+AG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D LQSK  KVAA KE K +LE+R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy Swiss-Prot
Match: Q05462 (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-56
Identity = 108/135 (80.00%), Postives = 122/135 (90.37%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+KPNKAVI+LQGR+AG+KAVIV+ FD+GTR++PYGHCLVAG+KK+PSKVI+KDS K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVKAF+KLVNYQH+MPTRYTLDVDLKD V  D LQSK  KV A KE KK LE+R
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy Swiss-Prot
Match: Q8LCL3 (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 7.2e-55
Identity = 105/135 (77.78%), Postives = 120/135 (88.89%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGR+AG+KAVI+++FD+GT DR YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D L+SK  KV A KE K +LE+R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy Swiss-Prot
Match: P41101 (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 9.7e-52
Identity = 106/139 (76.26%), Postives = 116/139 (83.45%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           M KF+KPNKAVI+LQG++AGRKAVIVR FDEGTRDRPYGHCLVAG+ +YP KVIRKDS K
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDL----KDVVNVDCLQSKVSKVAASKEIKKR 120
           K  KKSRVKAFIKLVNY HIMPTRYTLD DL    KDVVN D LQ++  KV A +  K R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKAR 120

Query: 121 LEDRFKTGKNRWFFTKLRF 136
           L +RFKTGKNRWFFTKLRF
Sbjct: 121 LAERFKTGKNRWFFTKLRF 138

BLAST of Cmc07g0187251 vs. ExPASy Swiss-Prot
Match: Q9SKX8 (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.7e-51
Identity = 97/135 (71.85%), Postives = 116/135 (85.93%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVK +KP KAVI+LQGR+ G+KAVIV++FD+GT ++ YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D + SK  KV A KE K + E+R
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy TrEMBL
Match: A0A5A7SSA5 (60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003380 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.6e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy TrEMBL
Match: A0A1S3CNL3 (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103502503 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.6e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy TrEMBL
Match: A0A0A0L310 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G618420 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKK
Sbjct: 1   MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVVRKDSKK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KTDKKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR
Sbjct: 61  KTDKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy TrEMBL
Match: A0A6J1FNC2 (60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111445816 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS K
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. ExPASy TrEMBL
Match: A0A0A0K3A4 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_7G209560 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.2e-66
Identity = 129/135 (95.56%), Postives = 134/135 (99.26%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVVRKDSKK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KTDKKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCLQS+VSKV+ASKEIKKRLE+R
Sbjct: 61  KTDKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. TAIR 10
Match: AT4G15000.1 (Ribosomal L27e protein family )

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-58
Identity = 108/135 (80.00%), Postives = 122/135 (90.37%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGR+AG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D LQSK  KVAA KE K +LE+R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. TAIR 10
Match: AT3G22230.1 (Ribosomal L27e protein family )

HSP 1 Score: 214.5 bits (545), Expect = 5.1e-56
Identity = 105/135 (77.78%), Postives = 120/135 (88.89%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGR+AG+KAVI+++FD+GT DR YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D L+SK  KV A KE K +LE+R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. TAIR 10
Match: AT2G32220.1 (Ribosomal L27e protein family )

HSP 1 Score: 202.2 bits (513), Expect = 2.6e-52
Identity = 97/135 (71.85%), Postives = 116/135 (85.93%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVK +KP KAVI+LQGR+ G+KAVIV++FD+GT ++ YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D + SK  KV A KE K + E+R
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

BLAST of Cmc07g0187251 vs. TAIR 10
Match: AT4G15000.2 (Ribosomal L27e protein family )

HSP 1 Score: 195.7 bits (496), Expect = 2.5e-50
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 0

Query: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGR+AG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120
           KT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D LQSK  KVAA KE K +LE+R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKT 124
           FKT
Sbjct: 121 FKT 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008464678.15.4e-68100.00PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo] >KAA0032926.1 60S rib... [more]
XP_004145994.39.3e-6898.5260S ribosomal protein L27-3 [Cucumis sativus] >KAE8649796.1 hypothetical protein... [more]
XP_022940098.15.1e-6697.7860S ribosomal protein L27-3-like [Cucurbita moschata][more]
KAG6608000.11.5e-6597.0460S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_011658974.23.3e-6595.5660S ribosomal protein L27 [Cucumis sativus] >KAE8646052.1 hypothetical protein C... [more]
Match NameE-valueIdentityDescription
P514195.9e-5780.0060S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2[more]
Q054621.3e-5680.0060S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1[more]
Q8LCL37.2e-5577.7860S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2[more]
P411019.7e-5276.2660S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1[more]
Q9SKX83.7e-5171.8560S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7SSA52.6e-68100.0060S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3CNL32.6e-68100.0060S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103502503 PE=3 SV=1[more]
A0A0A0L3102.2e-6797.7860S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G618420 PE=3 SV=1[more]
A0A6J1FNC22.5e-6697.7860S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111445816 PE=3 SV=... [more]
A0A0A0K3A47.2e-6695.5660S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_7G209560 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G15000.14.2e-5880.00Ribosomal L27e protein family [more]
AT3G22230.15.1e-5677.78Ribosomal L27e protein family [more]
AT2G32220.12.6e-5271.85Ribosomal L27e protein family [more]
AT4G15000.22.5e-5078.05Ribosomal L27e protein family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 4..31
e-value: 0.0033
score: 26.7
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 52..135
e-value: 3.4E-31
score: 107.4
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 1..135
IPR038655Ribosomal protein L27e superfamilyGENE3D2.30.30.770coord: 1..135
e-value: 1.2E-59
score: 202.3
NoneNo IPR availablePANTHERPTHR10497:SF1760S RIBOSOMAL PROTEIN L27coord: 1..135
IPR018262Ribosomal protein L27e, conserved sitePROSITEPS01107RIBOSOMAL_L27Ecoord: 124..135
IPR041991Eukaryotic Ribosomal Protein L27, KOW domainCDDcd06090KOW_RPL27coord: 6..88
e-value: 6.54567E-37
score: 119.21
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 2..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0187251.1Cmc07g0187251.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003735 structural constituent of ribosome