Cmc06g0170361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0170361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ATP-dependent zinc metalloprotease FtsH
Location	CMiso1.1chr06: 25625977 .. 25637046 (-)
RNA-Seq Expression	Cmc06g0170361
Synteny	Cmc06g0170361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTTCGAACACTATATTACTACTTTTTTCAAATTTACCAAATTATTAGTATTCAACAAATTTTGCTAATTATTTTTTTTTTACTTACAACGATGGATCAATTTTGCTTTGTCTTCTTCATCCTCTTCCTATCTCGGATTTCCACTTTTCAAGCTTCAGGCCGCAGAGAAATGGAAGTGGTTTCCATAGCTATATTGAGTTCTCTCATTGTCTTCACTTTAAAACTCTCTAATATTTGATTCCTCTTTTTTGTTCTTCACAAATGGCCTCCATTGATTCACTGTTATCTCCAAGGGCCTTCCTTCAAAATCCTCCTTCAACCAACTCACTCCTCGTCTGAACCATCTACAAACTAAGCGTTTCAATTTCACTCGGAATTCCAGAACGGCATTTTTGTTTCTTCACCGAAACAGGTTTGCTTTCTGTTTGGCAATTTCAAATTCTTCGGATTCACCGTCACAGTCCTCCGGTGGGCCGTGGCGATAAAGCTGCCCGAGATGATTTTGTAACCAGGGTTTTGAAGGAAAATCCCAGCCAATTGGAACCCAGGTATTTATTGGCGATAAATTGTGTACTTCGAAAGAGAAAGAGTATTTGAGTCCATAATCGGAGGTGGGTTTGTTTGATTTTGTGGTCAAGTGGTTGGATTCGAGAAAGAAATCGAAGGAGGAGGTAATTGAGGGTCATAATGAGGGTGGAAATAAGAGTGAGAACGTGTATTTGAAAGACATTTTGAGATATAAAGGGAAGCTTTATGTGCCTAAGCAGGTTTTCAATACAGAGTTATCGGAGGAAGAAGAATTTTATAGAAGTCTTGAGGCGTTGCCGAAAATGAGCTTCGAGGATTTTGTGAAAGCCATGGAGAGCGAAAAAGTCAAATTGTTAATTTCAAAGGAGAATAGCTACCTCTTATGGCAACAGGTTCAGAGAATTTATTGTGGATTTAAAGGAAATTCCAGGCGAAAAGAGCTTGCAAAGAACTAGATGGTAAACTTGACTAGCTTACATCCTTTCTTCTTGATTCTTTCTCCATTTGTTCTAATAAATATGCTTTTACCAGGGCGTTAAGGCTTGATGAGAGTAAAGCCCAAACAGTATTGGAGCAGTATACAGGTCCGCAATACCAAATTGAGGCGCATACCTCGGTGGGCAATCAATTCCTCAAACTATTTCTAGTTTTGACAGGTTGAGTTAAGATTTTTAATGTTGCAGAATCTCTTTGCTCTGAATTTTTTTTCACTTTTATTAGGAATTGCCATTTCATGTACGATCTTACTTGAAGACGACATGTTCTGTAGATTGTACGGTTATCTTTATTCATCCAAACCCGATAGTGAGGGGTTTTTCTCTTATACAAAATAATATACATGCGTTTTTTCTAATCAGAGTTTAACCTTTCCTGGGATTGTGTGTTTCAATTGGAATGTGTATCCTAGCTTTTGTACCGGGTTTTTCATCATTAGTCTATCCCTTCTTTACATAAAAATGATTTTCTATTTCCTTTTGTCCAAAAGGAATATGAAAAGAGGCTAGAAGATTTTCTGTTTATCTTCCTTGATATCTTGATTCTTATGATACAAGTGTTAGAGATAAAAATAATATTGACATCTTTCTTACTTCTTCGTCACCTTCTTCAAAGATCAATGAGAAAGAAAGAATTTCTTATTTTGATGGAAAGTGTATGAAATATTATCGTTTCCTTTCTCTCTTTATCATGTAGGAATTTTTGCAAGGGATTGATTTTTCACGCTCCAGCTCCAAAGCAGAAGCTCGTGTTAATGTTAGTACTCATTTCAAGTTCTTATAGTCCTCTTAGAGTAGAGGATGTAAATCCTAAGCATCATCCTATTGCTCTTGAATGAAAAATTGCAGGGTTCAGCCGGAGTCAAGTTCAGTGATGTAGCAGGAATTGACGAAGCTGTAGAGGATCTCCAAGAGGTACATAGCCATCAGTTGAGGCCTTGTCCATCGTTCCTTTCCTTTATTAATTTCATTTCTATCACTCTATGCTCAAAATAAACAATGGGATCTTTCATAATTTTGTCTTACAAAGAGAGAATCACATTTCAACCATTATCTCATAATATTTAGGATGAAATTTGAACCAGTATGTGGAACTTTCTTTCCTTGCTTGTAATGTGAGTGCTCAGGCTCTTTATTATATTTTTAATGTTATATAGATGAAGATGCATGGGAAATGGGAAAGGATGGGAATGATGGAAGAGTTGGAATTCGTAAGCCAGATGTCCTGATACTGACAACAACTACATTTTTCTTAACAGAAATGGAAATGTAAACTTTTATTAGGACATATGAAAGAGGAGCCGTGCAAAATTAAAAAAAGAAAAAGAAAAGAATACAAGTCACAATAAAAGGCTTCAGTTGTTGATAAAACTATATTCGTTCCTAAGTATTAAAGGATTTCAATCCGAATTTTACGCCTTCTCCATGTGAATTCCCTGGGAATAAGAGTTCACTTCTATGGCATTTATCTTGTCGTGGGTTGTAATTTTGTATCTGGTTGATAGGCTTCTCACCTCAATTTACTATTTCAACAATGTACATTGATATATTTATTGTTGATTGAAAGCCATAAGTTTTAATCAAGTGGTGGATTTACCCTTTTATTATTTTCCTGTTTAGTTGGTGAGATACTAAGAATCCTGAAGTGCTTGACAAAGTAGGAATAAAGCCTCCTCATGGAGTTCTTTCTGAAGGACCTCCCGGCTGTGGTAAGGTTAGTTTCACTTCCTCTAGATCTGGAAATATTTGAGCTGTACAATATTTCATTTACACAAGTTTAACTCCAGTCACATATTTCAGACGTTGGTAGCAAAGGCCATAGCTGGTGAAGCTGGCGTTCCATTTTACCAATGGCTGGATCTGAGATTGTTGAGGTTGTAGTTGGTGTTGGTTCTGCTCGTATTAGAGATCTATTTTAGAGAGCGAAGGTGATACTTCAGTTCTTGGAACCTTGGCACTTTTCTATTAACAGTATGAAGTATCCTCTTATATTCAATAAGTTATATGAGTTCAAGCCATCAGTAAAAGCAACTTTAACTCTTCCAATAGTATATTAGTTTCTTGGGTCATTCATTATCATTTTTGGAAATCCTTAACTGTGATAAGCTAGTAGGACCTTGTATAAGGTTTTTGTTTTTAAGGTTTGACGGTTTGCCTCATTGGCTAATCTTTGTCCGGCTTTTGGAGAAAGTTGGGGTCTTCCCAGTAGTAGTTTGGAAATGAAAAAATTTCTCAGCTTACCTGTTATCAAATAACTATGTATGTAGTTTAAGTGCAGAGTTTCACTTGTCCATTGTTTCTAAAGTCAGTTCTCTATGTTATCTCTATGCAGGTCAGTTATCTTCATGGATGGAATTCATGCCTTGGCGACTAGGTATTCAGGACATTGAACTTCTTTGGTTTATTTTAGTTAATAGATTACATTTAATGCATCACACTATATGACATGTTATCTTATGACTAAGGCAAGTGTCTATCATAGGGCCTTTGGGGTCCACGCCCCCATGTTGAGAACTTAATAATTTGGTGAAATCTCTCTGAAAATTAGTGGGGTCTCAACATCCCATGTTATTGGATATTAGATGTCATTTATTCTGTTAATCTTTTTCATGTCTTTTCTTTTAAGCAACAGCCAAAAGATCAGACTATTTATTTTCATCCGTCTTCATTCTTATAAATACTATTATGTCTCAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTCAACTTTTTGATTCATGAATCATGAATGTGCAATTGCTTGTTTTTCTGCCTGGGGAAAATGAATACAGAAAGATATCAAGTGTGCTTTTCAAATATTCTTGAAATCAATTGTTTCTAAATGCATGACATCATTTAAGAATTTGAATACCTGCATTTCTTGTGATAGAGAAATTGCAGTGCAATTCAAATTAAAGATTATTCATGATAATGACCTTCTAATTCTTTTAAATATGTTTTCCCTCGGCAAGTAAACTAAATTTTCTTGCTAATGTTAGGTGTTGTGTTCATACATGTAATATATAAAACTTAAAAGGTATACAGCATGTGAGCATACTTTTATGATTCTATATCTTGTTTGTCTATAATGTTGAGTACCTTCATGGGGCATTCTGTGCAGACAAAAATTCGTCCCCGGGCGCAAAAGGGAGACTCGGTATCTTGAAAATTCATGCAAGCAAAGTGAAGATGTCGCACTCTGTTGATCTAAGCACCACGAAATTTACCTGGTTTGTTCTTTTTTTGCTTTTTATTATTGATCTGTAACTTTGTTTCTTGAAATGATATATCAAATGACCAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGATGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAAGTCTGTTCAAATGTGCTAGGCCACCAATCCTATTTACATACCATAGGAAAAATAAGAAGAAACATGAAGCCAACGAAAGAGAGACAAGTGGCAAGAAGGATCATGGCCATGAGACCAACCCAGAGGTAACACGTGTTGAAGGGGAGGAAAGCAAGGAGGATGGGGGACCAGAAAGTGGGACCCACAGTTAGTTAGTCGTGGGCAATAAAAAGGGGACAGGAGGGCAGAGAAGGGTACGAATGTTTTGATGCGTTAGTGCAGGAGCAGGCACCTCCAGAAAGGGGAGGGTGGCACCAGGTTACCGTTTCTTTTTGTGTGCTTAAGTAGCCGTAGATTGTAGGAGAGGAGGAAGGCATTATTCCGAGTGTTCTTGTTTACGTCTGTGTTCTTGGTTATTACATACTGTGTGTGTTTTACTTTATCAGCTGGGTTGTTTTGTCAATCTTAGAAAGGCTATTGTCATTAGTCTTTGAAGTGTTTTATTTCTTGATTTTGTGCTGTACTCTGTTCTTCTGGAAAGTAAAAGAAAGGAACGAGGAAGTGTCTTAACATTTTGGTATCAGAGCTTCATACCTGGGCAGATCATGTCAACGACGAAGGCAACGGAGGAACGGTTGGAGGCGGTTGAGATGGAAATGAAAAGGCTGCCGATGATCGAGGAGAATATAGCATTACTAGCCAAAAGCATCACGGAAATGAACTCTCAAATTGATAAGCAGGCACAGCAGCAACAAGTGATACTGAAGTATATTGAAGGAATCGTTAAGGATGATTCTCCTGTACGAAGGACCGAAGAAGGGTCCACGAGCAAGGTCACCATGGCCGAAGCAATATATCCAGCGACTGTTGAAGAGCCGAAGTTAGAAGTAAAAACAGAGGAGGAGCGACCCGTGGATCGGAGCAAATTTAAGAAAGTTGAAATGCCAGTCTTCGACGGGACAGACCCCGACTCGTGGCTGTTCCGGGCCGACCGATACTTCAAGATACATAACTTGACGGATTCAGAGAGACTTACCGTGGCAGTAATCAGCTTCGATGGGCCGGCGTTGGACTGGTATCGATCACAAGAAGAGAGGGAAGCTTTCACCGGTTGGGATGACTTGAAGCTAAAGATGCTGGTGAGGTTCCGCGCAACTAGGGAAGGTACATTGGTGGGCCGGTTCTTAACGATCAAACAGGAGTCCACTGTCGAGGAGTACCGGAATCGTTTCGATAAACTATTGGCACCGGTGGCTTCCCTGCCGACGGTGGTGCTAGAGGAAACATTCATGAATGGGTTAAATCCATGGTTGAAGTTGGAGGTAGAAACACTGGAGCCCATTGGGCTGGCCCAAATGATGAAGTTGGCCTTGAAGATAGAAAATAGAGAGCTGGTCCGAAGGGAATGCGGGCTGATCAGCGCCTACGACAGCAAAATGGGCCATAAACAACAGCAGGCTAAGAGCCCCATCACAGCAGCCACGAAGGAAGGAACGGTCAGTGGGAGTTGGCCAATGAGAACGATAACACTGAGAGAGGTGGGTACGGGAGACAACCGTCGGGAAGGGCCCATGAAACGATTATCTGACGCCGAGTTCCAAGCTCGAAGGGAAAAAGGGTTATGTTTTCGCTGTGGGGAGAAGTATTTCGCCGGACATCGGTGCAAGTCGAAGGAGCATAAGGAGCTTCGAATGCTGGTAGTCAAAGAAGGAGGGGAGGAACTGGAAATTGTGGAGGAAGAGTTTTTCGATGCCGAAACTGAGATGAAACCAGCTGAAGTACCGAACGTGGAAAATTTAAACATAGAACTGTCGCTCAACTCCGTGGTGGGACTGAACAATCCGGGAACCATGAAAGTAAAAGGGAAGGTGGGAGAAGAAGAAGTGGTGATCTTGATCGATTGTGGGGCGACCCACAACTTCATCGCAGAAGACTTGGTGACCAGGTTAGTATTGACATTGCAGGAGACTCCAAACTATGGAGTAATCCTGGGCTCAGGAACGGCAGTAAAAGGTAAGGGGATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACTGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGCCTGATTAAGACAAGGGTGAGTTTGAAGAATCTAGTGAAAACGTGGGGGGCGGACGATCAGGGATTCCTGGTGGAATGCCGAACATTAGAATGCGGGAAGTTGGAAGATGAACAGGATCAGGGGCGGGGAAAGGTCGACGCTGAACCCATAGCGACACTACTCCAGCAATTCGCCCGCGTGTTTGAATGGCCTGCGACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATATCGATACGCGCATCATCAGAAGGAGGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGACCGAGTAAAAGCCCATACTCTAGCCCTGTGCTGTTAGTAAGGAAGAAAGACGGGAGTTGGAGGTTCTGCGTAGATTACCGAGCTTTGAACAATGTCACGATACCAGACAAATTTCCCATACCAGTGATAGAAGAATTATTTGACGAACTAAAGGGGGCCAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCTGAAGATATCGAAAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCGTTCGGATTAACAAATGCCCCCTCTACATTCCAGGCACTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCCTAATCTACAGCCAAGGGATGGACGAACATGTTCAGCACTTAGAAGTGGTTTTAGGACTACTGCAAGACCGGGAGTTATATGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTGAGTGACTGGCCAACCCCAACCAATGTGAGAGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTATAGGCGTTTCGTTAAGAACTATGGGGCCATAGCCGCACCACTCACCCAACTACTTAAGAAAGGAGCGTACAAATGGGATGCAGAAGCCGAGGGCGCTTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTGCCTTTCGAAATTAAATCAGATGCTTCGGGAGTGGGAGTGGGGGCTGTGCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACCTTAAGTATGCGGGACAGAGCACGACCTGTATACGAAAGAGAATTACTTTCTGTAGTGCTTGCAGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACAGACCAAAGGTCGCTTAAGTTCTTATTGGAACAACGGGTTGTGCAGCCTCAATATCAAAAATGGGTAGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCATTATCCAGGATATCCCCAGCAGTACACTTGAGTCAAATTACAGCTCCCCCGATGATAGACATGGAAATTATTAAGGAAGAAACAAGGCTTGACCCTGCACTGCGAGAAATCACCCGAATACTAGAAGAAGGGATGGAGATACCCCATTACACCCTGCAGCAAGGGGTATTGAAGTTTAAGGGCCGTTTGGTGATTCCAAGCAAGTTTACGTTGCTACCTACGATACTCCACACATACCACGACTCTGTGTTTGGGGGGCACTCAGGATTCTTGAGAACTTATAAACAGTTGACCGGAGAAATCTATTGGAAGGGAATGAAGAAAGACATCATGCGGTACTGTGAAGAATGTGCAATCTGCCAGCGTAATAAGTCATCGGCTCTATCTCCAGCTGGGTTACTGATGCCCTTAGAGATTCCAGACGCCATATGGAGTGATATATCCATGGATTTCATAGAAGGACTGCCAAAATCCAAGGGATGGGATGTGATATTCGTGGTGGTAGATAGGCTGAGTAAATATGGGCATTTTCTGTTGCTTAAGCACCCGTTTTCGGCCAAGATGGTAGCTGAAACATTTGTAAAGGAGGTGGTCCGACTTCATGGATACCCAAGATCGATAGTGTCTGACAGGGACAAGGTTTTTTTAAGCCATTTCTGGAAGGAACTCTTCCGCTTGGCAGGAACTAAGTTGAACCGGAGCTCTTCCTATCACCCCCAATCAGATGGCCAAACCGAGGTGGTAAATAAGAGTATTGAAACCTATCTAAGGTGTTTTTGTGGGGAAAAACCGAAAGAGTGGAGCCAATGGTTACATTGGGCAGAATATTGGTATAATACAACCTATCATAGTTCCATTGGAATTACACCTTTTCAAGCTGTGTATGGACGCCTTCCCCCTCCTTTGATTTACTATGGGGATATGGAGACACCTAACTCAACACTAGACCAGCAGCTGAAAGACAGAGATATAACATTGGGAGCCCTGAAGGAACATTTGAAACTAGCCCAAGAAAGGATGAAGAAACACGCTGACAATAAGAGAAGAGAAGTCGAGTTCCAGGAAGGGGATCTGGTATTCCTCAAACTGCGGCCTTACCGGCAGACCTCCCTCAGAAAGAAGAGAAATGAAAAGCTATCACCTAAGTATTTCGGGCCTTATCGAGTCTTAGAAAGGATCGGAAAGGTAGCATATAAACTAGAACTCCCCGCAGCTGCTGCTATTCACCCCGTGTTCCATGTATCACAATTGAAGAAGGCTGTAGGAAGAGGAGAGACTGCACAACCACTGAACCCGTACATGAATGCAAACCATGAATGGATCACACGACCGGAGGAGGTATATAGTTATCGCAAGAATCCAGTAACGAAGGAGTGGGAAGCCCTGATCAGTTGGAAGGGATTACCCCCACACGAGGCAACATGGGAAAGCTGCAATGACATGAAATATCAGTTTCCAGATTTTCACCTTGAGGACAAGGTGGATTTGGAAGAGGAGAGTGATGCTAGGCCACCAATCCTATTTACATACCATAGGAAAAATAAGAAGAAACATGAAGCCAACGAAAGAGAGACAAGTGGCAAGAAGGATCATGGCCATGAGACCAACCCAAAGGTAACACGTGTTGAAGGGGAGGAAAGCAAGGAGGATGGGGGACCAGAAAGTGGGACCCACAGTTAGTTAGTCGTGGGCAATAAAAAGGGGACAGGAGGGCAGAGAAGGGTACGAATGTTTTGATGCGTTAGTGCAGGAGCAGGCACCTCCAGAAAGGGGAGGGTGGCACCAGGTTACCGTTTCTTTTTGTGTGCTTAAGTAGCCGTAGATTGTAGGAGAGGAGGAAGGCATTATTCCGAGTGTTCTTGTTTACGTCTGTGTTCTTGGTTATTACATACTGTGTGTGTTTTACTTTATCAGCTGGGTTGTTTTGTCAATCTTAGAAAGGCTATTGTCATTAGTCTTTGAAGTGTTTTATTTCTTGATTTTGTGCTGTACTCTGTTCTTCTGGAAAGTAAAAGAAAGGAACGAGGAAGTGTCTTAACAAAATGCTTCCTTATTTGTTTGTTGTGATAAAATTTTCTTTACTTGCATCGGTGTCAAACTGACATGCTCGGCTTAAATAATCCAACCGTGTCTAAAAGCAGTCATGGTTTGAGTCTTTTGTTTTACAGTTCGTTTTTGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGATGATGAGGCTCCATGACCTCTCTTTTCCCTTCATGCCCTTGCGTTACATTAGCAGTTTTTTTAGGCTCGAAGATGGTAGCAGAGATGGCATGTATTATTGCCATATTATTTTCTCAAAATTCACATTTTTTATAACAAATTCTCATAGGTTAAATTTACAATTATGAAGTCAATTTTATATATTCTGCACTTTTGATCTTTATATACTATATTTAATATATTGTTTTTCTTATATACTTGGTAGTTTCAAATTCAACTTCTTGGTTCAA

mRNA sequence

AAAGTTCGAACACTATATTACTACTTTTTTCAAATTTACCAAATTATTAGTATTCAACAAATTTTGCTAATTATTTTTTTTTTACTTACAACGATGGATCAATTTTGCTTTGTCTTCTTCATCCTCTTCCTATCTCGGATTTCCACTTTTCAAGCTTCAGGCCGCAGAGAAATGGAAGTGGTTTCCATAGCTATATTGAGTTCTCTCATTGTCTTCACTTTAAAACTCTCTAATATTTGATTCCTCTTTTTTGTTCTTCACAAATGGCCTCCATTGATTCACTGTTATCTCCAAGGGCCTTCCTTCAAAATCCTCCTTCAACCAACTCACTCCTCGTCTGAACCATCTACAAACTAAGCGTTTCAATTTCACTCGGAATTCCAGAACGGCATTTTTGTTTCTTCACCGAAACAGGTTTGCTTTCTGTTTGGCAATTTCAAATTCTTCGGATTCACCGTCACAGTCCTCCGGTGGGCCGTGGCGATAAAGCTGCCCGAGATGATTTTGTAACCAGGGTTTTGAAGGAAAATCCCAGCCAATTGGAACCCAGGTATTTATTGGCGATAAATTGTGTACTTCGAAAGAGAAAGAGTATTTGAGTCCATAATCGGAGGTGGGTTTGTTTGATTTTGTGGTCAAGTGGTTGGATTCGAGAAAGAAATCGAAGGAGGAGGTAATTGAGGGTCATAATGAGGGTGGAAATAAGAGTGAGAACGTGTATTTGAAAGACATTTTGAGATATAAAGGGAAGCTTTATGTGCCTAAGCAGGTTTTCAATACAGAGTTATCGGAGGAAGAAGAATTTTATAGAAGTCTTGAGGCGTTGCCGAAAATGAGCTTCGAGGATTTTGTGAAAGCCATGGAGAGCGAAAAAGTCAAATTGTTAATTTCAAAGGAGAATAGCTACCTCTTATGGCAACAGGTTCAGAGAATTTATTGTGGATTTAAAGGAAATTCCAGGCGAAAAGAGCTTGCAAAGAACTAGATGGGCGTTAAGGCTTGATGAGAGTAAAGCCCAAACAGTATTGGAGCAGTATACAGGTCCGCAATACCAAATTGAGGCGCATACCTCGGTGGGCAATCAATTCCTCAAACTATTTCTAGTTTTGACAGGAATTTTTGCAAGGGATTGATTTTTCACGCTCCAGCTCCAAAGCAGAAGCTCGTGTTAATGGTTCAGCCGGAGTCAAGTTCAGTGATGTAGCAGGAATTGACGAAGCTGTAGAGGATCTCCAAGAGTTGGTGAGATACTAAGAATCCTGAAGTGCTTGACAAAGTAGGAATAAAGCCTCCTCATGGAGTTCTTTCTGAAGGACCTCCCGGCTGTGGTAAGACGTTGGTAGCAAAGGCCATAGCTGGTGAAGCTGGCGTTCCATTTTACCAATGGCTGGATCTGAGATTGTTGAGGTTGTAGTTGGTGTTGGTTCTGCTCGTATTAGAGATCTATTTTAGAGAGCGAAGGTCAGTTATCTTCATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGACAAAAATTCGTCCCCGGGCGCAAAAGGGAGACTCGGTATCTTGAAAATTCATGCAAGCAAAGTGAAGATGTCGCACTCTGTTGATCTAAGCACCACGAAATTTACCTGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGATGATGAGGCTCCATGACCTCTCTTTTCCCTTCATGCCCTTGCGTTACATTAGCAGTTTTTTTAGGCTCGAAGATGGTAGCAGAGATGGCATGTATTATTGCCATATTATTTTCTCAAAATTCACATTTTTTATAACAAATTCTCATAGGTTAAATTTACAATTATGAAGTCAATTTTATATATTCTGCACTTTTGATCTTTATATACTATATTTAATATATTGTTTTTCTTATATACTTGGTAGTTTCAAATTCAACTTCTTGGTTCAA

Coding sequence (CDS)

ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGACAAAAATTCGTCCCCGGGCGCAAAAGGGAGACTCGGTATCTTGAAAATTCATGCAAGCAAAGTGAAGATGTCGCACTCTGTTGA

Protein sequence

MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERQKFVPGRKRETRYLENSCKQSEDVALC

Homology

[Close]

BLAST of Cmc06g0170361 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 3.8e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 216 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 275

Query: 61  LLDPPLLRP 70
           LLDPPLLRP
Sbjct: 276 LLDPPLLRP 284

[Close]

BLAST of Cmc06g0170361 vs. NCBI nr
Match: KAA0060543.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 3.8e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 227 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 286

Query: 61  LLDPPLLRP 70
           LLDPPLLRP
Sbjct: 287 LLDPPLLRP 295

[Close]

BLAST of Cmc06g0170361 vs. NCBI nr
Match: XP_038877975.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 131.0 bits (328), Expect = 6.0e-27
Identity = 72/105 (68.57%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STDLLYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 539 IDEIDALATRRQGIFKESTDLLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 598

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + K  P    GR    R   +  K S+ V L
Sbjct: 599 LLDPALLRPGRFDRKIKIRPPGAKGRLDILRIHASKVKMSDSVDL 643

[Close]

BLAST of Cmc06g0170361 vs. NCBI nr
Match: MBA0826401.1 (hypothetical protein [Gossypium armourianum])

HSP 1 Score: 128.3 bits (321), Expect = 3.9e-26
Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK++TD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 533 IDEIDALATRRQGIFKETTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 592

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + K  P    GR +  +   +  K SE V L
Sbjct: 593 LLDPALLRPGRFDRKIKIRPPNAKGRLQILKIHASKVKMSESVDL 637

[Close]

BLAST of Cmc06g0170361 vs. NCBI nr
Match: EOY25060.1 (FtsH extracellular protease family isoform 1 [Theobroma cacao])

HSP 1 Score: 128.3 bits (321), Expect = 3.9e-26
Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 533 IDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 592

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + +  P    GR +  +   +  K SE V L
Sbjct: 593 LLDPALLRPGRFDRKIRIRPPNAKGRLQILKIHASKVKMSESVDL 637

[Close]

BLAST of Cmc06g0170361 vs. ExPASy Swiss-Prot
Match: O22993 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI1 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.8e-27
Identity = 66/105 (62.86%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 528 IDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 587

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + +  P    GR    +   +  K S+ V L
Sbjct: 588 LLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDL 632

[Close]

BLAST of Cmc06g0170361 vs. ExPASy Swiss-Prot
Match: B4U7U4 (ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp. (strain Y04AAS1) OX=380749 GN=ftsH PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-13
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERQKFVPGRKRETRY 88
           ERE TLNQLLVE+DGFDT +G++++AAT R D+LDP LLRPG FD RQ F+P    + RY
Sbjct: 281 EREQTLNQLLVEMDGFDTSEGILIIAATNRPDILDPALLRPGRFD-RQIFIPKPDVKGRY 339

[Close]

BLAST of Cmc06g0170361 vs. ExPASy Swiss-Prot
Match: O67077 (ATP-dependent zinc metalloprotease FtsH OS=Aquifex aeolicus (strain VF5) OX=224324 GN=ftsH PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-13
Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERQKFVPGRKRETRY 88
           ERE TLNQLLVE+DGFDT  G+I++AAT R D+LDP LLRPG FD RQ F+P      RY
Sbjct: 274 EREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFD-RQIFIPKPDVRGRY 332

[Close]

BLAST of Cmc06g0170361 vs. ExPASy Swiss-Prot
Match: Q67LC0 (ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=ftsH1 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13
Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALA RR+G+            T ERE T+NQLLVE+DGFD+G+GVI++AAT R D
Sbjct: 244 IDEIDALA-RRRGVGA-------GGGTEEREQTINQLLVEMDGFDSGEGVIVVAATNRPD 303

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           +LDP +LRPG FD      P    GR++         + S+ VAL
Sbjct: 304 VLDPAVLRPGRFDRHLTVDPPDRKGREQILAVHAREKRLSQAVAL 340

[Close]

BLAST of Cmc06g0170361 vs. ExPASy Swiss-Prot
Match: C1F8X6 (ATP-dependent zinc metalloprotease FtsH OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161) OX=240015 GN=ftsH PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER----QKFVPGRKR 88
           ERE TLNQLLVE+DGF+   GVIL+AAT R D+LDP LLRPG FD R    +  V GR+ 
Sbjct: 274 EREQTLNQLLVEMDGFEANDGVILVAATNRPDVLDPALLRPGRFDRRVVVGRPDVRGREE 333

Query: 89  ETRYLENSCKQSEDVAL 102
             R        +EDV L
Sbjct: 334 VLRVHAKKVPLAEDVDL 350

[Close]

BLAST of Cmc06g0170361 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.8e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 227 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 286

Query: 61  LLDPPLLRP 70
           LLDPPLLRP
Sbjct: 287 LLDPPLLRP 295

[Close]

BLAST of Cmc06g0170361 vs. ExPASy TrEMBL
Match: A0A5D3BRA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00550 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.8e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 216 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 275

Query: 61  LLDPPLLRP 70
           LLDPPLLRP
Sbjct: 276 LLDPPLLRP 284

[Close]

BLAST of Cmc06g0170361 vs. ExPASy TrEMBL
Match: A0A6J1B8A4 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Herrania umbratica OX=108875 GN=LOC110425161 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26
Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 533 IDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 592

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + +  P    GR +  +   +  K SE V L
Sbjct: 593 LLDPALLRPGRFDRKIRIRPPNAKGRLQILKVHASKVKMSESVDL 637

[Close]

BLAST of Cmc06g0170361 vs. ExPASy TrEMBL
Match: A0A061G6M0 (FtsH extracellular protease family isoform 4 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_016490 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26
Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 490 IDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 549

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + +  P    GR +  +   +  K SE V L
Sbjct: 550 LLDPALLRPGRFDRKIRIRPPNAKGRLQILKIHASKVKMSESVDL 594

[Close]

BLAST of Cmc06g0170361 vs. ExPASy TrEMBL
Match: A0A061G668 (FtsH extracellular protease family isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_016490 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26
Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 533 IDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 592

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + +  P    GR +  +   +  K SE V L
Sbjct: 593 LLDPALLRPGRFDRKIRIRPPNAKGRLQILKIHASKVKMSESVDL 637

[Close]

BLAST of Cmc06g0170361 vs. TAIR 10
Match: AT4G23940.1 (FtsH extracellular protease family )

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-28
Identity = 66/105 (62.86%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 528 IDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 587

Query: 61  LLDPPLLRPGPFDERQKFVP----GRKRETRYLENSCKQSEDVAL 102
           LLDP LLRPG FD + +  P    GR    +   +  K S+ V L
Sbjct: 588 LLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDL 632

[Close]

BLAST of Cmc06g0170361 vs. TAIR 10
Match: AT3G47060.1 (FTSH protease 7 )

HSP 1 Score: 68.6 bits (166), Expect = 3.4e-12
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I A+A  R G F+  ++        ERE TLNQLL E+DGFD+   VI+L AT R D
Sbjct: 423 IDEIDAVAKSRDGKFRMGSN-------DEREQTLNQLLTEMDGFDSNSAVIVLGATNRAD 482

Query: 61  LLDPPLLRPGPFD 74
           +LDP L RPG FD
Sbjct: 483 VLDPALRRPGRFD 488

[Close]

BLAST of Cmc06g0170361 vs. TAIR 10
Match: AT5G58870.1 (FTSH protease 9 )

HSP 1 Score: 68.2 bits (165), Expect = 4.5e-12
Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I A+A  R G F+         +  ERE TLNQLL E+DGFD+   VI+L AT R D
Sbjct: 427 IDEIDAVAKSRDGKFRM-------VSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRAD 486

Query: 61  LLDPPLLRPGPFD 74
           +LDP L RPG FD
Sbjct: 487 VLDPALRRPGRFD 492

[Close]

BLAST of Cmc06g0170361 vs. TAIR 10
Match: AT1G07510.1 (FTSH protease 10 )

HSP 1 Score: 65.1 bits (157), Expect = 3.8e-11
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER 76
           ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD +
Sbjct: 446 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQ 492

[Close]

BLAST of Cmc06g0170361 vs. TAIR 10
Match: AT2G29080.1 (FTSH protease 3 )

HSP 1 Score: 65.1 bits (157), Expect = 3.8e-11
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER 76
           ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD +
Sbjct: 440 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQ 486

The following BLAST results are available for this feature:

BLAST of Cmc06g0170361 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00786.1	3.8e-29	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060543.1	3.8e-29	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_038877975.1	6.0e-27	68.57	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Ben...	[more]
MBA0826401.1	3.9e-26	66.67	hypothetical protein [Gossypium armourianum]	[more]
EOY25060.1	3.9e-26	66.67	FtsH extracellular protease family isoform 1 [Theobroma cacao]	[more]

BLAST of Cmc06g0170361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22993	4.8e-27	62.86	Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=A...	[more]
B4U7U4	1.4e-13	63.33	ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp. (strain Y04AAS1)...	[more]
O67077	2.3e-13	65.00	ATP-dependent zinc metalloprotease FtsH OS=Aquifex aeolicus (strain VF5) OX=2243...	[more]
Q67LC0	5.1e-13	45.71	ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium thermophilum (strai...	[more]
C1F8X6	1.1e-12	54.55	ATP-dependent zinc metalloprotease FtsH OS=Acidobacterium capsulatum (strain ATC...	[more]

BLAST of Cmc06g0170361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UX59	1.8e-29	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BRA0	1.8e-29	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1B8A4	1.9e-26	66.67	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=H...	[more]
A0A061G6M0	1.9e-26	66.67	FtsH extracellular protease family isoform 4 (Fragment) OS=Theobroma cacao OX=36...	[more]
A0A061G668	1.9e-26	66.67	FtsH extracellular protease family isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_0...	[more]

BLAST of Cmc06g0170361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23940.1	3.4e-28	62.86	FtsH extracellular protease family	[more]
AT3G47060.1	3.4e-12	50.68	FTSH protease 7	[more]
AT5G58870.1	4.5e-12	50.68	FTSH protease 9	[more]
AT1G07510.1	3.8e-11	65.96	FTSH protease 10	[more]
AT2G29080.1	3.8e-11	65.96	FTSH protease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 1..78 e-value: 5.3E-10 score: 39.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..79 e-value: 6.8E-13 score: 50.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 29..80
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 2..77
None	No IPR available	PANTHER	PTHR23076:SF111	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATED	coord: 2..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0170361.1	Cmc06g0170361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0015074	DNA integration
biological_process	GO:0043572	plastid fission
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0003676	nucleic acid binding