Cmc06g0148241 (gene) Melon (Charmono) v1.1

Overview
NameCmc06g0148241
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr06: 760822 .. 763648 (-)
RNA-Seq ExpressionCmc06g0148241
SyntenyCmc06g0148241
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTTCGTACTAACTCCAATTTACTACTTACCACAAAAGTATTATTTAAGAAATGCGTGAACTCCCCAATTTATTTCATCATCTTGTTGAGTTGTTATTGTTAGGTGAGATTGAGATTGGATGAGTGAGTCGTGGACGTAGGTCGTCGTCATTGTTGATGGAAGCAACAGTAGCCGCTGGCGACGGAATGGCAAAGTCGGCTGGAAATTTGGAGATTGAAATCGGAGACGACAGCTACCGTCCAGCTGTGTTTAATTAAATGCGTCAGATAATGGCAAAGGTAAATTCCAACTTCTGTTAATATATAATTTGTGAATCGACGATCTCAGAATTTGAAATTGACGTCTATATATATATATGTGTGTGTGTGTGTGTGATCTCCATCCATCTCTGGTGTTTGTCCCAATCAATCAATCAATCAATCATTCATGTCAATTCCATCTCATTTCGAACCCTAATTCCTATCTATGCTCATCTTAGGGTTTCTTTCTCCCAAAACCCAAACTGCGTCGTTCTTCTAGGTTTCCAGTTCATGAAAATTAGTTTCGGGTTGAATTGCAAATTACGCAATTCAGTTTTTTGATTTTGACGGATGAGATTCCATTACACCATAAACATCTGTCCTATCTCAAATATATATATATATACACACATACATACATACTAAATTTCCTCAATCCTCCCTTCTACACTTTTTGTTTTATTTGTATTATATTTGTTTGAAATAAGTAATTGACTTATCACTACATTTCTAAATTTTCTTTTATTATTAAAAGATTAACGGTATAATTGTAACTACCACGATAATTTAGAAATCTTTTACCCAATCAAATACCAATTTTCTCTTTGTTATTTTGAAACTAAAAAAAGTTATATAATTGATTGTAAATTCAAATGTTTAAAATATAAAATTCAAGGCTACTAACATTCAGTGAAAAATAGATTAATAAAGTAGAACAATGAGTGGTAAATTTGATTATCATTTCTAATTGTTGTTGTACGAAAACATTATGTTAAAATACTAAAAAAAAACATAGGAGCAAACTTAGTTTTAAAACCAAGAGAAGGATATTTTTTATATATATACAACAAAATGTCCATGAAAGTACAAGTTGAATTATATTTATCAGGTGAAAATTTATTTATAGTAGAATTAAAATTATATATGTTATATTTAATGTAAAAAGGGAAAAAGTAAAGTTGGTAAGGTGTATTATATTGGTCATTTAAATAGTAATCCATGCAAATATAAGGTTAGGTGGGCATGCAAAATTATTCACACACGAAAATACTAAAAACATATTTTATAATCCAAACAATTACTCAAACTAAATTATATTCATCTTTTTTTATTTTCAATTTTTTTATGTTTTAATGATTTTTTAAAAATGAAAATGTCAGATACGAATGAATTGGATTGCAGGTGCGTTCATGAAACTCTCTCTTTCAGTGGCACGAAGGGGAGGCGGGGGGTGGAAGGAATTTCGAAAATGTCTCCCATTCTTAATTTCTTTGGAATCAAATGAACTGATGAAAGCTAATTCAATACAAATCACAATTGAATTGAGATTCAATTTCATAGCAATCGCATCCTCCACCACTGAAGTTCTGATTTTGGATTTTCTTACCTTTCCATGTCCGGCGTTCCCGTAGTAACCTTGAAGCTCTTCTGCGATCCACGGAGGTCGGACGTCGTCGTTGTCGTCGTCTTCTTCTGCATCACCAAACCGCACAAGAACCCTGAACTCTTTGATGGTTTTAGGGTTTTCGTTCCCCCCAAATTCCTAATCGCGTTCAAATCCCTAAGCACATTCGGTTTCCCCGACGGAGAACAAGCAGAGGAACTCGAAGATTCACTACCATCCGAAATTTCCGACGATTCTGGATCATGAGATTCAAGTGAAGTTTCAGAACCCCAAACCTTGGATCTCGTCCTCCGTCGCCGATTCAAACTTTCCCCCATCAAATCGCGGTAACCAATGGCAGAAACCCCATTCAAGGAAGCGAAATCAGAGTTCCCATTAACCATAACCCCAATGTTTAAAACCCCATGGAATCTTCCAGAAGGACGACGAACCTGTACGGCGGTGAAAGCAGGGGTAGCGGAACAGTCGTTAGAGGCGACGACGTTACCGATCAGGAAGCGGACCGTACCGACGAGAGTATCGCAGAAACGGCCGAGGGAGTAAATCTCGATGGAGACACCGGAGGTTTCGCGGGCAAGAAACTCAGGGGAGACACGGAAGAGGAACTTGTCGTTCCAGGTGGGGTTTTCGCCGCCGATGGTGTCGAGACGAGTACGGAGGCGGTGGGAAGGGTGAATCCAGGCGACGGCGTAGGTGTGTTTGGGGTTGAAAGGGTTGGAAGGGACTTTGAGGTCCTGGGCAGAGATGAGGTTGATCTCCAAGACAGGCATGGGGGTAGCCGGGGGGTTCTTGGGAACCCAGTCTCCGGCGACCTCCATGGAATCAAGAATGTGGAGTAAAGTGAAAGGGAAGGAAAGGGGGAGTATTAATAATGGGGTTGAAGTTCAAGAATGAAGGAAATTGTGGTTGCCATGGCCAGAGGTGCAGAATTTGTAAGGGTTAAAAAAAGGAAAGAGAGTGGGTGATGCTGTTCTTAGGCTGGAATTGAACTGGTATTCTCGCCGTCTATTCTCTCACTCCGACGATTTTTAAACTGTAACCTCCCGTTTCTTTCCTTCTTTTTCATTTCATTTCAATTTATAACTTTGGGTCAAAGTTTTTATCACACATTATATAACAAAAAGAAATGGTGGATTTTTTTCTTCCATTTTTTCTAATTTTTTATTTTTAAAAAAGTTAC

mRNA sequence

TTTGTTCGTACTAACTCCAATTTACTACTTACCACAAAAGTATTATTTAAGAAATGCGTGAACTCCCCAATTTATTTCATCATCTTGTTGAGTTGTTATTGTTAGGTGAGATTGAGATTGGATGAGTGAGTCGTGGACGTAGGTCGTCGTCATTGTTGATGGAAGCAACAGTAGCCGCTGGCGACGGAATGGCAAAGTCGGCTGGAAATTTGGAGATTGAAATCGGAGACGACAGCTACCGTCCAGCTGTGTTTAATTAAATGCGTCAGATAATGGCAAAGATACGAATGAATTGGATTGCAGGTGCGTTCATGAAACTCTCTCTTTCAGTGGCACGAAGGGGAGGCGGGGGGTGGAAGGAATTTCGAAAATGTCTCCCATTCTTAATTTCTTTGGAATCAAATGAACTGATGAAAGCTAATTCAATACAAATCACAATTGAATTGAGATTCAATTTCATAGCAATCGCATCCTCCACCACTGAAGTTCTGATTTTGGATTTTCTTACCTTTCCATGTCCGGCGTTCCCGTAGTAACCTTGAAGCTCTTCTGCGATCCACGGAGGTCGGACGTCGTCGTTGTCGTCGTCTTCTTCTGCATCACCAAACCGCACAAGAACCCTGAACTCTTTGATGGTTTTAGGGTTTTCGTTCCCCCCAAATTCCTAATCGCGTTCAAATCCCTAAGCACATTCGGTTTCCCCGACGGAGAACAAGCAGAGGAACTCGAAGATTCACTACCATCCGAAATTTCCGACGATTCTGGATCATGAGATTCAAGTGAAGTTTCAGAACCCCAAACCTTGGATCTCGTCCTCCGTCGCCGATTCAAACTTTCCCCCATCAAATCGCGGTAACCAATGGCAGAAACCCCATTCAAGGAAGCGAAATCAGAGTTCCCATTAACCATAACCCCAATGTTTAAAACCCCATGGAATCTTCCAGAAGGACGACGAACCTGTACGGCGGTGAAAGCAGGGGTAGCGGAACAGTCGTTAGAGGCGACGACGTTACCGATCAGGAAGCGGACCGTACCGACGAGAGTATCGCAGAAACGGCCGAGGGAGTAAATCTCGATGGAGACACCGGAGGTTTCGCGGGCAAGAAACTCAGGGGAGACACGGAAGAGGAACTTGTCGTTCCAGGTGGGGTTTTCGCCGCCGATGGTGTCGAGACGAGTACGGAGGCGGTGGGAAGGGTGAATCCAGGCGACGGCGTAGGTGTGTTTGGGGTTGAAAGGGTTGGAAGGGACTTTGAGGTCCTGGGCAGAGATGAGGTTGATCTCCAAGACAGGCATGGGGGTAGCCGGGGGGTTCTTGGGAACCCAGTCTCCGGCGACCTCCATGGAATCAAGAATGTGGAGTAAAGTGAAAGGGAAGGAAAGGGGGAGTATTAATAATGGGGTTGAAGTTCAAGAATGAAGGAAATTGTGGTTGCCATGGCCAGAGGTGCAGAATTTGTAAGGGTTAAAAAAAGGAAAGAGAGTGGGTGATGCTGTTCTTAGGCTGGAATTGAACTGGTATTCTCGCCGTCTATTCTCTCACTCCGACGATTTTTAAACTGTAACCTCCCGTTTCTTTCCTTCTTTTTCATTTCATTTCAATTTATAACTTTGGGTCAAAGTTTTTATCACACATTATATAACAAAAAGAAATGGTGGATTTTTTTCTTCCATTTTTTCTAATTTTTTATTTTTAAAAAAGTTAC

Coding sequence (CDS)

ATGGAATCTTCCAGAAGGACGACGAACCTGTACGGCGGTGAAAGCAGGGGTAGCGGAACAGTCGTTAGAGGCGACGACGTTACCGATCAGGAAGCGGACCGTACCGACGAGAGTATCGCAGAAACGGCCGAGGGAGTAAATCTCGATGGAGACACCGGAGGTTTCGCGGGCAAGAAACTCAGGGGAGACACGGAAGAGGAACTTGTCGTTCCAGGTGGGGTTTTCGCCGCCGATGGTGTCGAGACGAGTACGGAGGCGGTGGGAAGGGTGAATCCAGGCGACGGCGTAGGTGTGTTTGGGGTTGAAAGGGTTGGAAGGGACTTTGAGGTCCTGGGCAGAGATGAGGTTGATCTCCAAGACAGGCATGGGGGTAGCCGGGGGGTTCTTGGGAACCCAGTCTCCGGCGACCTCCATGGAATCAAGAATGTGGAGTAA

Protein sequence

MESSRRTTNLYGGESRGSGTVVRGDDVTDQEADRTDESIAETAEGVNLDGDTGGFAGKKLRGDTEEELVVPGGVFAADGVETSTEAVGRVNPGDGVGVFGVERVGRDFEVLGRDEVDLQDRHGGSRGVLGNPVSGDLHGIKNVE
Homology
[Close]
BLAST of Cmc06g0148241 vs. NCBI nr
Match: KAG9445699.1 (hypothetical protein H6P81_011827 [Aristolochia fimbriata])

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-11
Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 0 

Query: 1   MESSRRTTNLYGGESRGSGTVVRGDDVTDQEADRTDESIAETAEGVNLDGDTGGFAGKKL 60
           +E++    +L  GE RG           D+E D  DE + E  EGV+LDGD GG  G+++
Sbjct: 90  VEAAGGAADLQRGE-RGDAAAGEEVGAADEEPDCADEGVPEVPEGVDLDGDGGGVGGEEV 149

Query: 61  RGDTEEELVVPGGVFAADGVETSTEAVGRVNPGDGVGVFGVERVGRDFEVLGR 114
           RGD E+ELVVPGGVF  D ++  +E  G V+ G+GVGV  V R   + +++ R
Sbjct: 150 RGDPEDELVVPGGVFEPDAIDARSELGGGVDQGNGVGVGFVVRFCAEIKLISR 201

The following BLAST results are available for this feature:
BLAST of Cmc06g0148241 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG9445699.11.0e-1141.59hypothetical protein H6P81_011827 [Aristolochia fimbriata][more]
BLAST of Cmc06g0148241 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc06g0148241 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc06g0148241 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..40

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc06g0148241.1Cmc06g0148241.1mRNA