Cmc05g0146541 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0146541
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	40S ribosomal S3-like protein
Location	CMiso1.1chr05: 28983481 .. 28986265 (-)
RNA-Seq Expression	Cmc05g0146541
Synteny	Cmc05g0146541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGCTTGTTGGGCCGTATCTAAAAACCAATCGCCTCCGTTCATCTTGGAAACCCTAGATCCAATTTTGCTATCACAATCTCATAACATTTGCATGCAGCCATATAAAGTTCAATCCGCGGCAGCGCGGCACAGAGGCTTCCCTTCCCACATCTTAGATCTTTTTTGAGCGGCTTCATTGCTCTCTTTCCAGCCTCTCTTTGAATATGGCGACCCAGATGAGTAAGAAGAGAAAGGTCAGTACACAAATTTTCTCGATCTGTACTTTTTTCCTCCCATTATCTGCAACGATTGACCTCTTTCATCTTCTATTGATTGTTTTTTCTTTTCGATTTTGTTTCAGTTCGTAGCCGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCCGAGAGTTGGCAGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTCAGTTTACTTTCATTTATAAATTCAATTGATTAAAGTTATTTGAACAACCTACCTTATTCATTCATTGGACTTAACGTATTGGATTAACGTTCGCACTTTTTCTGTTATATAGGTGAAAAAGGTAGGAGGATTAGGGAGCTAACCTCTGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCCATTGCCCAAGCCGAGTCACTTCGTTATAAGCTACTTGGTGGCCTTGCTGTTCGTAGGTACTTTTTCGTTTTTCTTCCCATAACTACTAGTAGCATTATTTTTATTAATTTAAATTGAAATGGGAATATTATTTACGATTATGAAAGAATAAAAATCACAGAAATCTTATTTCTAGCGCAAATCTTTGACATCTTGTTTAAAATGCAGTATTTGACTAACTATATAAAATCTCACCCAATGGGAGCTTCGTTTTAGATTCATAAAAATGGTTTCCTTTTCTTGGATTTGTGATTACGTCATCTACAAAGCAGATTGGTTTTTTTGGTACCAACCTCGTGTCGGAAGGTGACAATATAAATTGAGCTCTTCCATTTGTTAATCGTTGTGGAATCATTTTGTTTCACACTGTAACCTTAGGGAAGATACATGCGCTTCCTGGTAGTATCTTTAGTCTCTTCTTGTCACATTATTTTTGGAGGCTAAAGATAGTATTGAGACGTTTTCTTAAAATAGGTGAGAACTAAGTCTCAATATTAGTCAATATAAACTATACTGATAATAAGAACGTATAATCCAGTTTTGTCCAGCACAATGTTTGTAGGAAAGTACTTGCAGGTAACACCTATCAACTAACACTTTCTTGTAAACAGATTCTACAAGGTTAGTCTCAATTCTCTGGTAGCAAGGAAGCGTGGTCTGTGCTTGAAAAGGAATCTTCTAGTTTTTTTCCCCTTGTGTGCGTGTGTGCGTTCTTTCTTAAATTTTCGGCAGGGGACATTCATACATGTCTTCCTATGAAAATCTACAAGAGAAGAACTGCATTCCACCTTGTCCGCATTTTAAGCCTACTGTCCGCCCCAATACTTATCTTACCATGAACGTCCCTATAATTTAATCCAATCTTGGAAACCCATTTGACATATAAATTAAAATCACTAGGCAGTGTATACACCGATCAAAGCTCACTGATGTGCTACAAGTCAACTCTCGAGTTTCCGTTTTGTTTAATCTACATGTTTTTTTCTAATCCAAAGTATTCAATGTCAACTTTTTTTCAAGTTTTTGTGTTCATATTATCTGTTAGACAGTCTAAATGTTTATATATGTACTTCTTCCATCAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCGAAGGGTTGTGAGGTTAGTTTGTAGCTCAATCCGCTATTATTATCAACATATGAAAAAATTGTATAGCTATGTTAACATGCAATTTGTAAATCGCAACAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCAAAATCTATGAAGTTCAAAGATGGATATATGATCTCTTCGGGTCAACCAGTCAGAGATTATATTGACTCGGCTGTTAGACATGTTCTTCTCAGACAGGTTAGCCTCGAGTATTAATATATAGAACAATTGCTTACACAATACATCCGTCACTCTGTTAATGTTATTTTGTTTTTCTGGCTCAGGGAGTTCTTGGTATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTCGTCACAATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCACCAGCAGTTTTGACCGCTGATATTGAGGTTCCAGTAGCAGTACCACCAGTACCAGTAGCTTGAGAGGGCTCTATTCTAGATATTAATGTATGGAATCAATCATCGTCCATTTTGTACTTTCTTTCCCAAAGATTTCGTTATGTCTCAGTGATCTGTTGGTTTGGGCCTCCCGACTGCAGAGCGTTCTTTTTGATAATCGAACAAAATGCATATGGAGAACAGTCTTTTTGAGATATTAATTTTCAATTTTTGCCTAATGATTATTTATTCTGAACCCTGTTTGAACTAAATCCCATCTTTTAGGTGCATACTTTCGTCAAGGACTTGACATTTGACTGCCATTTATTTTGTATTTTTTAGTACATTTGAGCTTATAATTGTATTATGTTTTTCAATGCTTTGGAAGAGCATTATTAGATATAATGTCAGACAGGTATGTCCTTTGTTTGAT

mRNA sequence

TGGGCTTGTTGGGCCGTATCTAAAAACCAATCGCCTCCGTTCATCTTGGAAACCCTAGATCCAATTTTGCTATCACAATCTCATAACATTTGCATGCAGCCATATAAAGTTCAATCCGCGGCAGCGCGGCACAGAGGCTTCCCTTCCCACATCTTAGATCTTTTTTGAGCGGCTTCATTGCTCTCTTTCCAGCCTCTCTTTGAATATGGCGACCCAGATGAGTAAGAAGAGAAAGTTCGTAGCCGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCCGAGAGTTGGCAGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTGAAAAAGGTAGGAGGATTAGGGAGCTAACCTCTGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCCATTGCCCAAGCCGAGTCACTTCGTTATAAGCTACTTGGTGGCCTTGCTGTTCGTAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCGAAGGGTTGTGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCAAAATCTATGAAGTTCAAAGATGGATATATGATCTCTTCGGGTCAACCAGTCAGAGATTATATTGACTCGGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTTGGTATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTCGTCACAATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCACCAGCAGTTTTGACCGCTGATATTGAGGTTCCAGTAGCAGTACCACCAGTACCAGTAGCTTGAGAGGGCTCTATTCTAGATATTAATGTATGGAATCAATCATCGTCCATTTTGTACTTTCTTTCCCAAAGATTTCGTTATGTCTCAGTGATCTGTTGGTTTGGGCCTCCCGACTGCAGAGCGTTCTTTTTGATAATCGAACAAAATGCATATGGAGAACAGTCTTTTTGAGATATTAATTTTCAATTTTTGCCTAATGATTATTTATTCTGAACCCTGTTTGAACTAAATCCCATCTTTTAGGTGCATACTTTCGTCAAGGACTTGACATTTGACTGCCATTTATTTTGTATTTTTTAGTACATTTGAGCTTATAATTGTATTATGTTTTTCAATGCTTTGGAAGAGCATTATTAGATATAATGTCAGACAGGTATGTCCTTTGTTTGAT

Coding sequence (CDS)

ATGGCGACCCAGATGAGTAAGAAGAGAAAGTTCGTAGCCGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCCGAGAGTTGGCAGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTGAAAAAGGTAGGAGGATTAGGGAGCTAACCTCTGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCCATTGCCCAAGCCGAGTCACTTCGTTATAAGCTACTTGGTGGCCTTGCTGTTCGTAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCGAAGGGTTGTGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCAAAATCTATGAAGTTCAAAGATGGATATATGATCTCTTCGGGTCAACCAGTCAGAGATTATATTGACTCGGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTTGGTATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTCGTCACAATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCACCAGCAGTTTTGACCGCTGATATTGAGGTTCCAGTAGCAGTACCACCAGTACCAGTAGCTTGA

Protein sequence

MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA

Homology

[Close]

BLAST of Cmc05g0146541 vs. NCBI nr
Match: XP_004141068.1 (40S ribosomal protein S3-2 [Cucumis sativus] >XP_008459686.1 PREDICTED: 40S ribosomal protein S3-2 [Cucumis melo] >KGN60514.1 hypothetical protein Csa_019414 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240

Query: 241 PVA 244
           PVA
Sbjct: 241 PVA 243

[Close]

BLAST of Cmc05g0146541 vs. NCBI nr
Match: XP_038890738.1 (40S ribosomal protein S3-2 [Benincasa hispida])

HSP 1 Score: 457.2 bits (1175), Expect = 8.7e-125
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVP 239
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP AVLT DIEVPVAVP
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVAVP 238

[Close]

BLAST of Cmc05g0146541 vs. NCBI nr
Match: KAA0061472.1 (40S ribosomal protein S3-3 [Cucumis melo var. makuwa] >TYK10802.1 40S ribosomal protein S3-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 452.6 bits (1163), Expect = 2.2e-123
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 9   RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
           R FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE
Sbjct: 569 RVFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 628

Query: 69  LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME 128
           LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME
Sbjct: 629 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME 688

Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI 188
           SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI
Sbjct: 689 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI 748

Query: 189 MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA 244
           MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA
Sbjct: 749 MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA 803

[Close]

BLAST of Cmc05g0146541 vs. NCBI nr
Match: XP_023546322.1 (40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 9.0e-122
Identity = 233/238 (97.90%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP-PAVLTADIEVPVAV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP  AVLT DIEVPV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVV 238

[Close]

BLAST of Cmc05g0146541 vs. NCBI nr
Match: KAG6599520.1 (40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-121
Identity = 233/240 (97.08%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 651 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 710

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 711 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 770

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 771 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 830

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP---PAVLTADIEVPVAV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP    AVLT DIEVPV V
Sbjct: 831 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAVLTTDIEVPVVV 890

[Close]

BLAST of Cmc05g0146541 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 4.8e-110
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVH----RPPAVLTAD-----I 239
           VLGIKVK+MLDWDPKG  GP TPLPDVV IHSPKEEE I        PA L AD     +
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Cmc05g0146541 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.4e-109
Identity = 209/249 (83.94%), Postives = 225/249 (90.36%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVA---- 240
           VLG+KVKIMLDWDPKGKQGP TPLPDVV IH+PKE++  +  P  V+T    VP A    
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYI-APAQVVTQAAFVPEAPLTT 240

Query: 241 --VPPVPVA 244
              P +PVA
Sbjct: 241 TDYPAMPVA 248

[Close]

BLAST of Cmc05g0146541 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.2e-108
Identity = 206/251 (82.07%), Postives = 222/251 (88.45%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTA----------- 240
           VLGIKVKIMLDWDP GK GP TPLPDVV IH+PK  +++V+  PA   A           
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPK--DDVVYSAPAQAAAPVTLVQEAPLT 240

[Close]

BLAST of Cmc05g0146541 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 8.0e-97
Identity = 183/216 (84.72%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 217
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Cmc05g0146541 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.0e-97
Identity = 183/216 (84.72%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 217
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Cmc05g0146541 vs. ExPASy TrEMBL
Match: A0A0A0LHQ6 (KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.3e-129
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240

Query: 241 PVA 244
           PVA
Sbjct: 241 PVA 243

[Close]

BLAST of Cmc05g0146541 vs. ExPASy TrEMBL
Match: A0A1S3CAV4 (40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.3e-129
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240

Query: 241 PVA 244
           PVA
Sbjct: 241 PVA 243

[Close]

BLAST of Cmc05g0146541 vs. ExPASy TrEMBL
Match: A0A5A7UZY3 (40S ribosomal protein S3-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001180 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 9   RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
           R FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE
Sbjct: 569 RVFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 628

Query: 69  LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME 128
           LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME
Sbjct: 629 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME 688

Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI 188
           SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI
Sbjct: 689 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI 748

Query: 189 MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA 244
           MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA
Sbjct: 749 MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA 803

[Close]

BLAST of Cmc05g0146541 vs. ExPASy TrEMBL
Match: A0A6J1DMD4 (40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.5e-122
Identity = 230/237 (97.05%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR PA+L+ DIE+PV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR-PAILSTDIEIPVVV 236

[Close]

BLAST of Cmc05g0146541 vs. ExPASy TrEMBL
Match: A0A6J1G4R4 (40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.3e-121
Identity = 233/242 (96.28%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP-----PAVLTADIEVPV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP      AVLT DIEVPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPV 240

[Close]

BLAST of Cmc05g0146541 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-111
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVH----RPPAVLTAD-----I 239
           VLGIKVK+MLDWDPKG  GP TPLPDVV IHSPKEEE I        PA L AD     +
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Cmc05g0146541 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-110
Identity = 209/249 (83.94%), Postives = 225/249 (90.36%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVA---- 240
           VLG+KVKIMLDWDPKGKQGP TPLPDVV IH+PKE++  +  P  V+T    VP A    
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYI-APAQVVTQAAFVPEAPLTT 240

Query: 241 --VPPVPVA 244
              P +PVA
Sbjct: 241 TDYPAMPVA 248

[Close]

BLAST of Cmc05g0146541 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 394.0 bits (1011), Expect = 8.5e-110
Identity = 206/251 (82.07%), Postives = 222/251 (88.45%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTA----------- 240
           VLGIKVKIMLDWDP GK GP TPLPDVV IH+PK  +++V+  PA   A           
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPK--DDVVYSAPAQAAAPVTLVQEAPLT 240

The following BLAST results are available for this feature:

BLAST of Cmc05g0146541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141068.1	1.3e-128	100.00	40S ribosomal protein S3-2 [Cucumis sativus] >XP_008459686.1 PREDICTED: 40S ribo...	[more]
XP_038890738.1	8.7e-125	99.16	40S ribosomal protein S3-2 [Benincasa hispida]	[more]
KAA0061472.1	2.2e-123	99.57	40S ribosomal protein S3-3 [Cucumis melo var. makuwa] >TYK10802.1 40S ribosomal ...	[more]
XP_023546322.1	9.0e-122	97.90	40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6599520.1	1.5e-121	97.08	40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cmc05g0146541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M339	4.8e-110	84.62	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9FJA6	2.4e-109	83.94	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9SIP7	1.2e-108	82.07	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	8.0e-97	84.72	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
P47835	8.0e-97	84.72	40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1	[more]

BLAST of Cmc05g0146541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHQ6	6.3e-129	100.00	KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 P...	[more]
A0A1S3CAV4	6.3e-129	100.00	40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1	[more]
A0A5A7UZY3	1.0e-123	99.57	40S ribosomal protein S3-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1DMD4	7.5e-122	97.05	40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 P...	[more]
A0A6J1G4R4	1.3e-121	96.28	40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE...	[more]

BLAST of Cmc05g0146541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53870.1	3.4e-111	84.62	Ribosomal protein S3 family protein	[more]
AT5G35530.1	1.7e-110	83.94	Ribosomal protein S3 family protein	[more]
AT2G31610.1	8.5e-110	82.07	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..219 e-value: 9.2E-67 score: 224.8
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 93..191
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..93 e-value: 1.1E-12 score: 47.6
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 11.333969
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 106..188 e-value: 2.4E-25 score: 88.8
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..91 e-value: 2.0E-48 score: 164.3
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 8..211 e-value: 3.3E-71 score: 237.0
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 2..234
None	No IPR available	PANTHER	PTHR11760:SF51	RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED	coord: 2..234
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..95 e-value: 2.63699E-51 score: 159.695
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 147..183
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0146541.1	Cmc05g0146541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome