Cmc05g0141731 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0141731
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase
Location	CMiso1.1chr05: 25778339 .. 25779493 (+)
RNA-Seq Expression	Cmc05g0141731
Synteny	Cmc05g0141731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAATGGTAACATGTTGCAACACCAACTTCCAAGGTTCAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAATAAAGACAAAAAGGCTTTATTTTTCATTTATCAAGCTGTTGATGAATTTATTTCCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCTGCTTGGGATATTTTACGATCTACCTATCAAGGAGAAGATAAGGTAAAGATGATAAGGTTACAAGCTCTCAGATCCGAATTTGATTGCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCATATTCTTGTAATTGTCAATAGTTTAAGATCAAATGGTGAAGAAGTAGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAAATTTGAGCATATCGTCGTTGCAATTGAAGAATCGAAAGACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAACCCCGAGGAAGCTTTTCAAATGCAAACTTCATTTAGAGGCGGTTCACGTGGAAGACGTGGTGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAGCGGAGCAAATTCTGAAAATTCACAAGAAAGCTCTTCTTTATCTCGAGGAAGAGGAAGCGGAAGAAGAAGAGGCTTTGGCAGAAACCAAGGAGGTGGTCGTGGTAATTTCTCTCAAATTCAATGCTTTAATTGCAGAAAGTATGGTCATTTTCAAGCAGATTGTTGGGCACTAAAAAATGGAGTTGGAAATACCACCATGAATATGCATAAAGAACAAAAGAAAAATGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAAAGCCTACATGGTATCTTGATAGTGGTTGTAGTAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTTGATGAATCTTTCCAAAGTGAAGTGAAGACGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGA

mRNA sequence

ATGGCTTCAAATGGTAACATGTTGCAACACCAACTTCCAAGGTTCAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAATAAAGACAAAAAGGCTTTATTTTTCATTTATCAAGCTGTTGATGAATTTATTTCCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCTGCTTGGGATATTTTACGATCTACCTATCAAGGAGAAGATAAGGTAAAGATGATAAGGTTACAAGCTCTCAGATCCGAATTTGATTGCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCATATTCTTGTAATTGTCAATAGTTTAAGATCAAATGGTGAAGAAGTAGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAAATTTGAGCATATCGTCGTTGCAATTGAAGAATCGAAAGACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAACCCCGAGGAAGCTTTTCAAATGCAAACTTCATTTAGAGGCGGTTCACGTGGAAGACGTGGTGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAGCGGAGCAAATTCTGAAAATTCACAAGAAAGCTCTTCTTTATCTCGAGGAAGAGGAAGCGGAAGAAGAAGAGGCTTTGGCAGAAACCAAGGAGGTGGTCGTGGTAATTTCTCTCAAATTCAATGCTTTAATTGCAGAAAGTATGGTCATTTTCAAGCAGATTGTTGGGCACTAAAAAATGGAGTTGGAAATACCACCATGAATATGCATAAAGAACAAAAGAAAAATGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAAAGCCTACATGGTATCTTGATAGTGGTTGTAGTAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTTGATGAATCTTTCCAAAGTGAAGTGAAGACGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGA

Coding sequence (CDS)

ATGGCTTCAAATGGTAACATGTTGCAACACCAACTTCCAAGGTTCAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAATAAAGACAAAAAGGCTTTATTTTTCATTTATCAAGCTGTTGATGAATTTATTTCCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCTGCTTGGGATATTTTACGATCTACCTATCAAGGAGAAGATAAGGTAAAGATGATAAGGTTACAAGCTCTCAGATCCGAATTTGATTGCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCATATTCTTGTAATTGTCAATAGTTTAAGATCAAATGGTGAAGAAGTAGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAAATTTGAGCATATCGTCGTTGCAATTGAAGAATCGAAAGACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAACCCCGAGGAAGCTTTTCAAATGCAAACTTCATTTAGAGGCGGTTCACGTGGAAGACGTGGTGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAGCGGAGCAAATTCTGAAAATTCACAAGAAAGCTCTTCTTTATCTCGAGGAAGAGGAAGCGGAAGAAGAAGAGGCTTTGGCAGAAACCAAGGAGGTGGTCGTGGTAATTTCTCTCAAATTCAATGCTTTAATTGCAGAAAGTATGGTCATTTTCAAGCAGATTGTTGGGCACTAAAAAATGGAGTTGGAAATACCACCATGAATATGCATAAAGAACAAAAGAAAAATGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAAAGCCTACATGGTATCTTGATAGTGGTTGTAGTAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTTGATGAATCTTTCCAAAGTGAAGTGAAGACGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGA

Protein sequence

MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWALKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFDESFQSEVKTVIIPDYKSKAKVIFL

Homology

[Close]

BLAST of Cmc05g0141731 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 698.0 bits (1800), Expect = 4.6e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 361 ESFQSEVKT 369

[Close]

BLAST of Cmc05g0141731 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 698.0 bits (1800), Expect = 4.6e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 361 ESFQSEVKT 369

[Close]

BLAST of Cmc05g0141731 vs. NCBI nr
Match: KAA0057291.1 (integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. makuwa] >KAA0062702.1 integrase [Cucumis melo var. makuwa] >TYJ98712.1 integrase [Cucumis melo var. makuwa] >TYK13441.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 698.0 bits (1800), Expect = 4.6e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 361 ESFQSEVKT 369

[Close]

BLAST of Cmc05g0141731 vs. NCBI nr
Match: TYK24556.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 698.0 bits (1800), Expect = 4.6e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 361 ESFQSEVKT 369

[Close]

BLAST of Cmc05g0141731 vs. NCBI nr
Match: KAA0051603.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 698.0 bits (1800), Expect = 4.6e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 41  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 100

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 101 LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 160

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 161 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 220

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 221 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 280

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 281 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 340

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 341 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 400

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 401 ESFQSEVKT 409

[Close]

BLAST of Cmc05g0141731 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.2e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 361 ESFQSEVKT 369

[Close]

BLAST of Cmc05g0141731 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.2e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 361 ESFQSEVKT 369

[Close]

BLAST of Cmc05g0141731 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.2e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 361 ESFQSEVKT 369

[Close]

BLAST of Cmc05g0141731 vs. ExPASy TrEMBL
Match: A0A5D3CXM6 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.2e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 466 MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 525

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 526 LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 585

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 586 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 645

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 646 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 705

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 706 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 765

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 766 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 825

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 826 ESFQSEVKT 834

[Close]

BLAST of Cmc05g0141731 vs. ExPASy TrEMBL
Match: A0A5A7U6S3 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001490 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.2e-197
Identity = 359/369 (97.29%), Postives = 361/369 (97.83%), Query Frame = 0


Query: 1   MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
           MASNGNMLQ QLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 41  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 100

Query: 61  LRENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120
           LRENR KDKKALFFIYQAVDEFI ERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS
Sbjct: 101 LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 160

Query: 121 EFDCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180
           EFDCIKMKETETIEEFFN ILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 161 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 220

Query: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 221 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 280

Query: 241 DNRSGANSENSQESSSLSRGRGSGRRRGFGRNQGGGRGNFSQIQCFNCRKYGHFQADCWA 300
           DNRSGANSENSQESSSLSRGRGSGR RGFGRNQGGGRGNFSQIQCFNC KYGHFQA+CWA
Sbjct: 281 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 340

Query: 301 LKNGVGNTTMNMHKEQKKNDEGILFLACSVQDNVVKPTWYLDSGCSNHMTGNRSIFVTFD 360
           LKNGVGNTTMNMHKEQKK DEGILFLACSVQDNVV+PTWYLDSGCSNHMTGNRSIFVT D
Sbjct: 341 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 400

Query: 361 ESFQSEVKT 370
           ESFQSEVKT
Sbjct: 401 ESFQSEVKT 409

[Close]

BLAST of Cmc05g0141731 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-16
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 1  MASNGNMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60
          MASN   +  Q+P  +  N++ WS++MK + G+ ++W+IVE+G+ E EN+  L+  Q   
Sbjct: 1  MASNN--VPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDG 60

Query: 61 LRENRNKDKKALFFIYQAVDEFISERISTATSAK 95
          LR++R +DKKAL  IYQ +DE   E++  ATSAK
Sbjct: 61 LRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAK 92

The following BLAST results are available for this feature:

BLAST of Cmc05g0141731 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95504.1	4.6e-197	97.29	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0039947.1	4.6e-197	97.29	integrase [Cucumis melo var. makuwa]	[more]
KAA0057291.1	4.6e-197	97.29	integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. ...	[more]
TYK24556.1	4.6e-197	97.29	integrase [Cucumis melo var. makuwa]	[more]
KAA0051603.1	4.6e-197	97.29	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0141731 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc05g0141731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV1	2.2e-197	97.29	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	2.2e-197	97.29	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]
A0A5D3E3T2	2.2e-197	97.29	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5D3CXM6	2.2e-197	97.29	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=...	[more]
A0A5A7U6S3	2.2e-197	97.29	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001490 PE=...	[more]

BLAST of Cmc05g0141731 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48720.1	8.6e-16	43.62	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..64
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 66..205 e-value: 1.3E-26 score: 93.0
None	No IPR available	GENE3D	4.10.60.10		coord: 248..319 e-value: 2.9E-6 score: 29.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..261
None	No IPR available	PANTHER	PTHR34222:SF30	SUBFAMILY NOT NAMED	coord: 26..368
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 26..368
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 284..300 e-value: 0.0072 score: 24.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 285..298 score: 9.158235
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 271..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0141731.1	Cmc05g0141731.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding