Homology
BLAST of Cmc05g0141701 vs. NCBI nr
Match:
KAA0039770.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24727.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 543/670 (81.04%), Postives = 602/670 (89.85%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVKGRQIIDAIL+ANEAIDYWRVKK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 388 MAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 447
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDY+SRLL+SVGE
Sbjct: 448 KWRNWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYMSRLLNSVGE 507
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+++ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 508 KIKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 567
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDA+RT+QIASQWGI+T FLPINYLGVPLGGK ITK FW N++EKINKKLASWKYSML
Sbjct: 568 INVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSML 627
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 628 SKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKI 687
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KEKGGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 688 TSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 747
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKGL WFQR VSW IKNGR+FSFWHS WHQNSPLS HYPRLYALST ++SS
Sbjct: 748 SSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSSHYPRLYALSTNKESS 807
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WE+PLWAELKNSLNASFCENG D+P W L+S+G Y VA
Sbjct: 808 IRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGNDSPMWTLNSNGLYTVA 867
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLC 540
SVKK + Q +Q +L + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +PNLC
Sbjct: 868 SVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLC 927
Query: 541 SKPNWCAMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKS 600
S+P+WC MCKRN+EDRIHLF LCPIA SIW ISS L+SNV CLSPK+LCITMCSWKQK+
Sbjct: 928 SRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLSPKELCITMCSWKQKT 987
Query: 601 KKNIILFNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQAT 660
KKN+ILFNTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+
Sbjct: 988 KKNVILFNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQAS 1047
Query: 661 SLVLNLHAFT 671
S+ LNL+AF+
Sbjct: 1048 SIALNLNAFS 1057
BLAST of Cmc05g0141701 vs. NCBI nr
Match:
XP_016902461.1 (PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo])
HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 542/670 (80.90%), Postives = 601/670 (89.70%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVKGRQIIDAIL+ANEAIDYWRVKK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 388 MAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 447
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDY+SRLL+SVGE
Sbjct: 448 KWRNWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYMSRLLNSVGE 507
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+++ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 508 KIKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 567
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDA+RT+QIASQWGI+T FLPINYLGVPLGGK ITK FW N++EKINKKLASWKYSML
Sbjct: 568 INVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSML 627
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FK P S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 628 SKGGKITLIKSSLASLPTYQLSIFKVPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKI 687
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KEKGGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 688 TSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 747
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKGL WFQR VSW IKNGR+FSFWHS WHQNSPLS HYPRLYALST ++SS
Sbjct: 748 SSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSSHYPRLYALSTNKESS 807
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WE+PLWAELKNSLNASFCENG D+P W L+S+G Y VA
Sbjct: 808 IRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGNDSPMWTLNSNGLYTVA 867
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLC 540
SVKK + Q +Q +L + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +PNLC
Sbjct: 868 SVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLC 927
Query: 541 SKPNWCAMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKS 600
S+P+WC MCKRN+EDRIHLF LCPIA SIW ISS L+SNV CLSPK+LCITMCSWKQK+
Sbjct: 928 SRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLSPKELCITMCSWKQKT 987
Query: 601 KKNIILFNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQAT 660
KKN+ILFNTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+
Sbjct: 988 KKNVILFNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQAS 1047
Query: 661 SLVLNLHAFT 671
S+ LNL+AF+
Sbjct: 1048 SIALNLNAFS 1057
BLAST of Cmc05g0141701 vs. NCBI nr
Match:
TYK06777.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1148.7 bits (2970), Expect = 0.0e+00
Identity = 540/670 (80.60%), Postives = 599/670 (89.40%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVK RQIIDAIL+ANEAIDYWR KK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 451 MAFVKDRQIIDAILVANEAIDYWRFKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 510
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDYISRLL+SVGE
Sbjct: 511 KWRSWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE 570
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+++ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 571 KIKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 630
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDA+RT+QIASQWGI+T FLPINYLGVPLGGK TK FW N++EKINKKLASWKYSML
Sbjct: 631 INVDASRTEQIASQWGISTKFLPINYLGVPLGGKQTTKAFWKNVEEKINKKLASWKYSML 690
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 691 SKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKI 750
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KEKGGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 751 TSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 810
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKGL WFQR VSW IKNGR+FSFWH WHQNSPLS HYPRLYALST ++SS
Sbjct: 811 SSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHGHWHQNSPLSSHYPRLYALSTNKESS 870
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WE PLWAELKNS+NASFCENG+D+P W L+S+G Y VA
Sbjct: 871 IRDMWNNTLMDWDLNPRRQLREWELPLWAELKNSINASFCENGKDSPMWALNSNGLYTVA 930
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLC 540
SVKKA+ Q +Q +L + + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +P LC
Sbjct: 931 SVKKALQQPEQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPKLC 990
Query: 541 SKPNWCAMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKS 600
S+P+WC MCKRN+EDRIHLF LCPIA SIW ISS LNSNV CLSPK+LCITMCSWKQK+
Sbjct: 991 SRPSWCVMCKRNDEDRIHLFILCPIAKSIWRTISSHLNSNVNCLSPKELCITMCSWKQKT 1050
Query: 601 KKNIILFNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQAT 660
KKN+ILFNTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+
Sbjct: 1051 KKNVILFNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQAS 1110
Query: 661 SLVLNLHAFT 671
S+ LNL+AF+
Sbjct: 1111 SIALNLNAFS 1120
BLAST of Cmc05g0141701 vs. NCBI nr
Match:
KAA0040037.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 933.3 bits (2411), Expect = 1.1e-267
Identity = 436/544 (80.15%), Postives = 486/544 (89.34%), Query Frame = 0
Query: 127 MKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISPINVDAA 186
M+ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISPINVDAA
Sbjct: 1 MEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISPINVDAA 60
Query: 187 RTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSMLSKGEKI 246
RT+QIASQWGI+T FLPINYLGVPLGGK ITK FW N++EKINKKLASWKYSMLSKG KI
Sbjct: 61 RTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKI 120
Query: 247 TLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKITSLKEK 306
TLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKITS KE+
Sbjct: 121 TLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKITSPKER 180
Query: 307 GGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHSSSRSPW 366
GGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHSSSRSPW
Sbjct: 181 GGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHSSSRSPW 240
Query: 367 RSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSSINDMWN 426
SICKGL WFQR VSW IKNGR+FSFWHS WHQNSPLS HYPRL+ALST +DSSI DMWN
Sbjct: 241 FSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSFHYPRLFALSTNKDSSIRDMWN 300
Query: 427 TTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVASVKKAI 486
TLMDWDL PRRQLR+WEYPLWAELKNSLNASFCENG+D+PTW L+S+G Y VASVKKA+
Sbjct: 301 NTLMDWDLNPRRQLREWEYPLWAELKNSLNASFCENGKDSPTWTLNSNGLYTVASVKKAL 360
Query: 487 HQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLCSKPNWC 546
Q DQ +L + + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +PNLCS+P+WC
Sbjct: 361 QQPDQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLCSRPSWC 420
Query: 547 AMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKSKKNIIL 606
MCKRN+EDRIHLF LCPIA SIW LISS LNSNV CLSPKDLCITMCSWKQK+KKN+IL
Sbjct: 421 VMCKRNDEDRIHLFILCPIAKSIWRLISSHLNSNVNCLSPKDLCITMCSWKQKTKKNVIL 480
Query: 607 FNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQATSLVLNL 666
+NTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+S+ LNL
Sbjct: 481 YNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQASSIALNL 540
Query: 667 HAFT 671
+AF+
Sbjct: 541 NAFS 544
BLAST of Cmc05g0141701 vs. NCBI nr
Match:
KAA0041367.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 879.0 bits (2270), Expect = 2.6e-251
Identity = 415/505 (82.18%), Postives = 457/505 (90.50%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVKGRQIIDAIL+ANEAIDYWRVKK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 212 MAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 271
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
+WRRWI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDYISRLL+SVGE
Sbjct: 272 RWRRWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE 331
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+M+ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 332 KIKGVKMEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 391
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDAART+QIASQWGI+T FLPINYLGVPLGGK TK FW N++EKINKKLASWKYSML
Sbjct: 392 INVDAARTEQIASQWGISTKFLPINYLGVPLGGKQTTKTFWKNVEEKINKKLASWKYSML 451
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 452 SKGGKITLIKSSLASLPTYQLSIFKAPVSACKNIEKTWRNFLWKNPPETHKLHLVNWAKI 511
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KE+GGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 512 TSPKERGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 571
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKG+ WFQR VSW IKNGR+FSFWHS WHQNSPLSLHYPRL+ALST +DSS
Sbjct: 572 SSRSPWFSICKGVEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSLHYPRLFALSTNKDSS 631
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WEYPLWAELKNSLNASFCENG+D+P W L+S+G Y VA
Sbjct: 632 IRDMWNNTLMDWDLNPRRQLREWEYPLWAELKNSLNASFCENGKDSPAWTLNSNGLYTVA 691
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNL 506
SVKKA+ Q DQ ++ + + NTF+ L
Sbjct: 692 SVKKALQQPDQSLIDLQSQNTFSLL 716
BLAST of Cmc05g0141701 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 1.7e-35
Identity = 105/364 (28.85%), Postives = 161/364 (44.23%), Query Frame = 0
Query: 209 VPLGGKPITKVFWNNIDEKINKKLASWKYSMLSKGEKITLIKSTLASLPTYQLSVFKAPA 268
+P+ K I K + I E+++ +++ W+ LS ++TL K+ L+S+P + +S P
Sbjct: 1 MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60
Query: 269 SIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKITSLKEKGGLGISRIKDTNFALLIKWLWR 328
SI +++ R F W S + K HLV+W+K+ S K++GGLG+ K N AL+ K WR
Sbjct: 61 SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120
Query: 329 YIHEDFPLWKKIINAKYSSKTQGDIPCDSNHSSSRSPWRSICKGL-TWFQRQVSWNIKNG 388
+ E LW ++ KY D S S WRSI GL V W +G
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDG 180
Query: 389 RNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSSINDMWNTTLMDWDLKPRRQLRDWEYPL 448
+ FW +W PL L + D+W WD L
Sbjct: 181 QQIRFWTDRWVSGKPL-LELDNGERPTDCDTVVAKDLW-IPGRGWDFAKIDPYTTNNTRL 240
Query: 449 WAELKNSLNASFCENGRDTPTWNLSSDGFYYVASVKKAIHQSDQGVLAIPNHNTFTN-LW 508
EL+ ++ RD +W S DG + SV+ A + PN +F N LW
Sbjct: 241 --ELR-AVVLDLVTGARDRLSWKFSQDGQF---SVRSAYEMLTVDEVPRPNMASFFNCLW 300
Query: 509 KSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLCSKPNWCAMCKRNEEDRIHLFSLCPIA 568
K +P++ K F+W + +V T ++ + S N C +CK E +H+ CP
Sbjct: 301 KVRVPERVKTFLWLVGNQAVMTEEERHR---RHLSASNVCQVCKGGVESMLHVLRDCPAQ 353
Query: 569 YSIW 571
IW
Sbjct: 361 LGIW 353
BLAST of Cmc05g0141701 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 117.1 bits (292), Expect = 7.7e-25
Identity = 97/325 (29.85%), Postives = 153/325 (47.08%), Query Frame = 0
Query: 24 RVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRP 83
R K +I +D EKAFDK+ F+ L K G + + I+A +II+NG+
Sbjct: 588 RAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQK 647
Query: 84 RGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGENIKGVRM-KDNLNLTHLLFADDI 143
G RQG P+SP +F +V++ ++R + E IKG+++ K+ + L+ LFADD+
Sbjct: 648 LEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKE-IKGIQLGKEEVKLS--LFADDM 707
Query: 144 LLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISPINVDAARTDQIASQWGITTHFL 203
++++E+ S NL K+IS F SG IN+ KS N + QI + T
Sbjct: 708 IVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASK 767
Query: 204 PINYLGVPL--GGKPITKVFWNNIDEKINKKLASWKYSMLSKGEKITLIKSTLASLPTYQ 263
I YLG+ L K + K + + ++I + WK S +I ++K + Y+
Sbjct: 768 RIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYR 827
Query: 264 LSV--FKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAK-ITSLKEK-GGLGISRIKD 323
+ K P + + +EK+ F WN R AK I S K K GG+ + K
Sbjct: 828 FNAIPIKLPMTFFTELEKTTLKFIWNQKR-------ARIAKSILSQKNKAGGITLPDFKL 887
Query: 324 TNFALLIK--WLWRYIHEDFPLWKK 340
A + K W W Y + D W +
Sbjct: 888 YYKATVTKTAWYW-YQNRDIDQWNR 901
BLAST of Cmc05g0141701 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 110.5 bits (275), Expect = 7.2e-23
Identity = 94/361 (26.04%), Postives = 167/361 (46.26%), Query Frame = 0
Query: 24 RVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRP 83
++K +I LD EKAFDK+ F+ +L + G + IKA S +I +NG
Sbjct: 595 KLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEK 654
Query: 84 RGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGENIKGVRM-KDNLNLTHLLFADDI 143
I G RQG P+SP++F +V++ ++R + E IKG+++ K+ + ++ L ADD+
Sbjct: 655 LEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQQKE-IKGIQIGKEEVKIS--LLADDM 714
Query: 144 LLFVEDDETSLLNLKKIISLFQLASGLNINLNKST--ISPINVDAARTDQIASQWGITTH 203
++++ D + S L +I+ F G IN NKS + N A + + + + I T+
Sbjct: 715 IVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTN 774
Query: 204 FLPINYLGVPLGG--KPITKVFWNNIDEKINKKLASWKYSMLSKGEKITLIKSTLASLPT 263
I YLGV L K + + ++ ++I + L WK S +I ++K +
Sbjct: 775 --NIKYLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAILPKAI 834
Query: 264 YQLSV--FKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKITSLKEKGGLGISRIKD 323
Y+ + K P + +E + F WN +K + + + + GG+ + +K
Sbjct: 835 YRFNAIPIKIPTQFFNELEGAICKFVWN-----NKKPRIAKSLLKDKRTSGGITMPDLKL 894
Query: 324 TNFALLIK--WLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHSSSRSPWRSICKGLT 376
A++IK W W Y W +I + + + T G + D + + SI
Sbjct: 895 YYRAIVIKTAWYW-YRDRQVDQWNRIEDPEMNPHTYGHLIFDKGAKTIQWKKDSIFNNWC 944
BLAST of Cmc05g0141701 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 2.6e-20
Identity = 87/335 (25.97%), Postives = 159/335 (47.46%), Query Frame = 0
Query: 24 RVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRP 83
++K ++ +D EKAFD + F+ L K G + + I+A S +II+NG
Sbjct: 587 KLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVK 646
Query: 84 RGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGENIKGVRM-KDNLNLTHLLFADDI 143
G RQG P+SP +F +VM+ ++ + + IKG+ + + + L+ LFADD+
Sbjct: 647 LKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIRE-EKAIKGIHIGSEEIKLS--LFADDM 706
Query: 144 LLFVEDDETSLLNLKKIISLFQLASGLNINLNKST--ISPINVDAARTDQIASQWGITTH 203
++++E+ S L ++I + SG IN +KS I N A +T + T
Sbjct: 707 IVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKT--VKDSIPFTVV 766
Query: 204 FLPINYLGVPL--GGKPITKVFWNNIDEKINKKLASWKYSMLSKGEKITLIKSTLASLPT 263
+ YLGV L K + K + + ++I + + WK S +I ++K ++
Sbjct: 767 PKKMKYLGVYLTKDVKDLYKENYETLRKEIAEDVNKWKNIPCSWLGRINIVKMSILPKAI 826
Query: 264 YQLSV--FKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKITSLKEKGGLGISRIKD 323
Y + KAP S +K +EK +F WN K + +++ + GG+ + ++
Sbjct: 827 YNFNAIPIKAPLSYFKDLEKIILHFIWN-----QKKPQIAKTLLSNKNKAGGITLPDLRL 886
Query: 324 TNFALLIK--WLWRYIHEDFPLWKKIINAKYSSKT 350
+++IK W W + + + +W +I N + T
Sbjct: 887 YYKSIVIKTAWYW-HKNREVDVWNRIENQEMDPAT 910
BLAST of Cmc05g0141701 vs. ExPASy Swiss-Prot
Match:
Q05118 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 2.6e-12
Identity = 78/316 (24.68%), Postives = 134/316 (42.41%), Query Frame = 0
Query: 13 ILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPIKWRRWIKACISS 72
I++ I R+K V+ LDI KAFD ++ I + G + +I + I+
Sbjct: 6 IIMLEHYIKLRRLKGKTYNVVSLDIRKAFDTVSHPAILRAMRAFGIDDGMQDFIMSTITD 65
Query: 73 VQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGENIKGVRMKDNLN 132
+I++ GR KI G++QGDP+SP +F +V+D L+ + + G M
Sbjct: 66 AYTNIVVGGRTTNKIYIRNGVKQGDPLSPVLFNIVLD---ELVTRLNDEQPGASMTPACK 125
Query: 133 LTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNK-STISPINVDAARTDQI 192
+ L FADD+LL +ED + + N + G+ +N K ++IS V +
Sbjct: 126 IASLAFADDLLL-LEDRDIDVPNSLATTCAYFRTRGMTLNPEKCASISAATVSGRSVPRS 185
Query: 193 ASQWGITTHFL-------PINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSMLSKGE 252
+ I ++ YLG+ + K N + + L + + + L +
Sbjct: 186 KPSFTIDGRYIKPLGGINTFKYLGLTFSSTGVAKPTVYN----LTRWLRNLEKAPLKPNQ 245
Query: 253 KITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRN-----FFWNSPTDSHKLHLVRWAK 312
K ++K+ L Y L A I + ++ R F N T S LH A+
Sbjct: 246 KFYILKTHLLPRLFYGLQSPGVTAGILQECDRLARRTTRKIFHLNVHTGSQFLH----AR 305
Query: 313 ITSLKEKGGLGISRIK 316
I GGLG+ +++
Sbjct: 306 I----RDGGLGLVQMR 305
BLAST of Cmc05g0141701 vs. ExPASy TrEMBL
Match:
A0A5D3DM72 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002870 PE=4 SV=1)
HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 543/670 (81.04%), Postives = 602/670 (89.85%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVKGRQIIDAIL+ANEAIDYWRVKK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 388 MAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 447
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDY+SRLL+SVGE
Sbjct: 448 KWRNWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYMSRLLNSVGE 507
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+++ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 508 KIKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 567
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDA+RT+QIASQWGI+T FLPINYLGVPLGGK ITK FW N++EKINKKLASWKYSML
Sbjct: 568 INVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSML 627
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 628 SKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKI 687
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KEKGGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 688 TSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 747
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKGL WFQR VSW IKNGR+FSFWHS WHQNSPLS HYPRLYALST ++SS
Sbjct: 748 SSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSSHYPRLYALSTNKESS 807
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WE+PLWAELKNSLNASFCENG D+P W L+S+G Y VA
Sbjct: 808 IRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGNDSPMWTLNSNGLYTVA 867
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLC 540
SVKK + Q +Q +L + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +PNLC
Sbjct: 868 SVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLC 927
Query: 541 SKPNWCAMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKS 600
S+P+WC MCKRN+EDRIHLF LCPIA SIW ISS L+SNV CLSPK+LCITMCSWKQK+
Sbjct: 928 SRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLSPKELCITMCSWKQKT 987
Query: 601 KKNIILFNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQAT 660
KKN+ILFNTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+
Sbjct: 988 KKNVILFNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQAS 1047
Query: 661 SLVLNLHAFT 671
S+ LNL+AF+
Sbjct: 1048 SIALNLNAFS 1057
BLAST of Cmc05g0141701 vs. ExPASy TrEMBL
Match:
A0A1S4E2K5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC107991687 PE=4 SV=1)
HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 542/670 (80.90%), Postives = 601/670 (89.70%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVKGRQIIDAIL+ANEAIDYWRVKK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 388 MAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 447
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDY+SRLL+SVGE
Sbjct: 448 KWRNWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYMSRLLNSVGE 507
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+++ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 508 KIKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 567
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDA+RT+QIASQWGI+T FLPINYLGVPLGGK ITK FW N++EKINKKLASWKYSML
Sbjct: 568 INVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSML 627
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FK P S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 628 SKGGKITLIKSSLASLPTYQLSIFKVPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKI 687
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KEKGGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 688 TSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 747
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKGL WFQR VSW IKNGR+FSFWHS WHQNSPLS HYPRLYALST ++SS
Sbjct: 748 SSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSSHYPRLYALSTNKESS 807
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WE+PLWAELKNSLNASFCENG D+P W L+S+G Y VA
Sbjct: 808 IRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGNDSPMWTLNSNGLYTVA 867
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLC 540
SVKK + Q +Q +L + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +PNLC
Sbjct: 868 SVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLC 927
Query: 541 SKPNWCAMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKS 600
S+P+WC MCKRN+EDRIHLF LCPIA SIW ISS L+SNV CLSPK+LCITMCSWKQK+
Sbjct: 928 SRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLSPKELCITMCSWKQKT 987
Query: 601 KKNIILFNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQAT 660
KKN+ILFNTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+
Sbjct: 988 KKNVILFNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQAS 1047
Query: 661 SLVLNLHAFT 671
S+ LNL+AF+
Sbjct: 1048 SIALNLNAFS 1057
BLAST of Cmc05g0141701 vs. ExPASy TrEMBL
Match:
A0A5D3C4J1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00790 PE=4 SV=1)
HSP 1 Score: 1148.7 bits (2970), Expect = 0.0e+00
Identity = 540/670 (80.60%), Postives = 599/670 (89.40%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVK RQIIDAIL+ANEAIDYWR KK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 451 MAFVKDRQIIDAILVANEAIDYWRFKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 510
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDYISRLL+SVGE
Sbjct: 511 KWRSWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE 570
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+++ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 571 KIKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 630
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDA+RT+QIASQWGI+T FLPINYLGVPLGGK TK FW N++EKINKKLASWKYSML
Sbjct: 631 INVDASRTEQIASQWGISTKFLPINYLGVPLGGKQTTKAFWKNVEEKINKKLASWKYSML 690
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 691 SKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKI 750
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KEKGGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 751 TSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 810
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKGL WFQR VSW IKNGR+FSFWH WHQNSPLS HYPRLYALST ++SS
Sbjct: 811 SSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHGHWHQNSPLSSHYPRLYALSTNKESS 870
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WE PLWAELKNS+NASFCENG+D+P W L+S+G Y VA
Sbjct: 871 IRDMWNNTLMDWDLNPRRQLREWELPLWAELKNSINASFCENGKDSPMWALNSNGLYTVA 930
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLC 540
SVKKA+ Q +Q +L + + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +P LC
Sbjct: 931 SVKKALQQPEQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPKLC 990
Query: 541 SKPNWCAMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKS 600
S+P+WC MCKRN+EDRIHLF LCPIA SIW ISS LNSNV CLSPK+LCITMCSWKQK+
Sbjct: 991 SRPSWCVMCKRNDEDRIHLFILCPIAKSIWRTISSHLNSNVNCLSPKELCITMCSWKQKT 1050
Query: 601 KKNIILFNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQAT 660
KKN+ILFNTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+
Sbjct: 1051 KKNVILFNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQAS 1110
Query: 661 SLVLNLHAFT 671
S+ LNL+AF+
Sbjct: 1111 SIALNLNAFS 1120
BLAST of Cmc05g0141701 vs. ExPASy TrEMBL
Match:
A0A5A7TES3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00040 PE=4 SV=1)
HSP 1 Score: 933.3 bits (2411), Expect = 5.5e-268
Identity = 436/544 (80.15%), Postives = 486/544 (89.34%), Query Frame = 0
Query: 127 MKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISPINVDAA 186
M+ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISPINVDAA
Sbjct: 1 MEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISPINVDAA 60
Query: 187 RTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSMLSKGEKI 246
RT+QIASQWGI+T FLPINYLGVPLGGK ITK FW N++EKINKKLASWKYSMLSKG KI
Sbjct: 61 RTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKI 120
Query: 247 TLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKITSLKEK 306
TLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKITS KE+
Sbjct: 121 TLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKITSPKER 180
Query: 307 GGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHSSSRSPW 366
GGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHSSSRSPW
Sbjct: 181 GGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHSSSRSPW 240
Query: 367 RSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSSINDMWN 426
SICKGL WFQR VSW IKNGR+FSFWHS WHQNSPLS HYPRL+ALST +DSSI DMWN
Sbjct: 241 FSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSFHYPRLFALSTNKDSSIRDMWN 300
Query: 427 TTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVASVKKAI 486
TLMDWDL PRRQLR+WEYPLWAELKNSLNASFCENG+D+PTW L+S+G Y VASVKKA+
Sbjct: 301 NTLMDWDLNPRRQLREWEYPLWAELKNSLNASFCENGKDSPTWTLNSNGLYTVASVKKAL 360
Query: 487 HQSDQGVLAIPNHNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLCSKPNWC 546
Q DQ +L + + NTF NLWK++IPKKC FFIW+LLYDSVNTA+QL K +PNLCS+P+WC
Sbjct: 361 QQPDQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLCSRPSWC 420
Query: 547 AMCKRNEEDRIHLFSLCPIAYSIWSLISSLLNSNVTCLSPKDLCITMCSWKQKSKKNIIL 606
MCKRN+EDRIHLF LCPIA SIW LISS LNSNV CLSPKDLCITMCSWKQK+KKN+IL
Sbjct: 421 VMCKRNDEDRIHLFILCPIAKSIWRLISSHLNSNVNCLSPKDLCITMCSWKQKTKKNVIL 480
Query: 607 FNTYASALWNIWLERNARIFNDKEKIVADLWEDKKALTGLWTSKSILFSNYQATSLVLNL 666
+NTYASALWNIWLERNARIFN KEK VA++WED KAL GLWTS+S LFSNYQA+S+ LNL
Sbjct: 481 YNTYASALWNIWLERNARIFNGKEKTVAEIWEDIKALAGLWTSRSSLFSNYQASSIALNL 540
Query: 667 HAFT 671
+AF+
Sbjct: 541 NAFS 544
BLAST of Cmc05g0141701 vs. ExPASy TrEMBL
Match:
A0A5A7TI93 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00120 PE=4 SV=1)
HSP 1 Score: 879.0 bits (2270), Expect = 1.2e-251
Identity = 415/505 (82.18%), Postives = 457/505 (90.50%), Query Frame = 0
Query: 1 MAFVKGRQIIDAILIANEAIDYWRVKKTKGFVIKLDIEKAFDKLNWKFIDFMLMKKGYPI 60
MAFVKGRQIIDAIL+ANEAIDYWRVKK +GFVIKLDIEKAFDKLNW+FIDFMLMKKGYP
Sbjct: 212 MAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPF 271
Query: 61 KWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE 120
+WRRWI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVL MDYISRLL+SVGE
Sbjct: 272 RWRRWIRACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE 331
Query: 121 NIKGVRMKDNLNLTHLLFADDILLFVEDDETSLLNLKKIISLFQLASGLNINLNKSTISP 180
IKGV+M+ N+NLTHLLFADDILLFVEDDE S+ NLK II+LFQLASGL+INLNKSTISP
Sbjct: 332 KIKGVKMEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISP 391
Query: 181 INVDAARTDQIASQWGITTHFLPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSML 240
INVDAART+QIASQWGI+T FLPINYLGVPLGGK TK FW N++EKINKKLASWKYSML
Sbjct: 392 INVDAARTEQIASQWGISTKFLPINYLGVPLGGKQTTKTFWKNVEEKINKKLASWKYSML 451
Query: 241 SKGEKITLIKSTLASLPTYQLSVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKI 300
SKG KITLIKS+LASLPTYQLS+FKAP S K+IEK+WRNF W +P ++HKLHLV WAKI
Sbjct: 452 SKGGKITLIKSSLASLPTYQLSIFKAPVSACKNIEKTWRNFLWKNPPETHKLHLVNWAKI 511
Query: 301 TSLKEKGGLGISRIKDTNFALLIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHS 360
TS KE+GGLGISR+KDTNFALL KWLWRYIHED PLWKKIINAKY S ++GDIPC NHS
Sbjct: 512 TSPKERGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHS 571
Query: 361 SSRSPWRSICKGLTWFQRQVSWNIKNGRNFSFWHSQWHQNSPLSLHYPRLYALSTIQDSS 420
SSRSPW SICKG+ WFQR VSW IKNGR+FSFWHS WHQNSPLSLHYPRL+ALST +DSS
Sbjct: 572 SSRSPWFSICKGVEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSLHYPRLFALSTNKDSS 631
Query: 421 INDMWNTTLMDWDLKPRRQLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVA 480
I DMWN TLMDWDL PRRQLR+WEYPLWAELKNSLNASFCENG+D+P W L+S+G Y VA
Sbjct: 632 IRDMWNNTLMDWDLNPRRQLREWEYPLWAELKNSLNASFCENGKDSPAWTLNSNGLYTVA 691
Query: 481 SVKKAIHQSDQGVLAIPNHNTFTNL 506
SVKKA+ Q DQ ++ + + NTF+ L
Sbjct: 692 SVKKALQQPDQSLIDLQSQNTFSLL 716
BLAST of Cmc05g0141701 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 102.8 bits (255), Expect = 1.1e-21
Identity = 87/371 (23.45%), Postives = 143/371 (38.54%), Query Frame = 0
Query: 202 LPINYLGVPLGGKPITKVFWNNIDEKINKKLASWKYSMLSKGEKITLIKSTLASLPTYQL 261
LP+ YLG+PL K +T + + EKI ++ W LS ++ LI S + SL + +
Sbjct: 23 LPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWM 82
Query: 262 SVFKAPASIYKSIEKSWRNFFWNSPTDSHKLHLVRWAKITSLKEKGGLGISRIKDTNFAL 321
S F+ P++ K I+ +F W+ P + K V W+ + + K++GGLGI +K+ N
Sbjct: 83 SAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKG- 142
Query: 322 LIKWLWRYIHEDFPLWKKIINAKYSSKTQGDIPCDSNHSSSRSPWRSICKGLTWFQRQVS 381
W N + W+ I K V
Sbjct: 143 -------------SFWS----------------ISGNTTLGSWMWKKILKHRALASGFVK 202
Query: 382 WNIKNGRNFSFWHSQWHQNSPL---SLHYPRLYALSTIQDSSINDMWNTTLMDWDLKPRR 441
+I NG N SFW W + L + H + T+ S + N +PRR
Sbjct: 203 HDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVVNH-------RPRR 262
Query: 442 QLRDWEYPLWAELKNSLNASFCENGRDTPTWNLSSDGFYYVASVKKAIHQSDQGVLAIPN 501
D + ++ + +G DT W + D F + K+ + + L +
Sbjct: 263 HRHDTLLRI-EDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKETWAATREPKLKV-- 322
Query: 502 HNTFTNLWKSTIPKKCKFFIWSLLYDSVNTADQLTKIIPNLCSKPNWCAMCKRNEEDRIH 561
N + +W S K W + + + T D++ S C +C E R H
Sbjct: 323 -NWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSS---CVLCHHLVETRDH 349
Query: 562 LFSLCPIAYSI 570
LF CP + +
Sbjct: 383 LFFTCPYSAEV 349
BLAST of Cmc05g0141701 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 67.4 bits (163), Expect = 5.0e-11
Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 78 IINGRPRGKIQPSRGIRQGDPISPFIFVLVMDYISRLLDSVGE--NIKGVRMKDNL-NLT 137
IING P+G + PSRG+RQGDP+SP++F+L + +S L E + G+R+ +N +
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 138 HLLFADD 142
HLLFADD
Sbjct: 73 HLLFADD 79
BLAST of Cmc05g0141701 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 50.1 bits (118), Expect = 8.3e-06
Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 2 AFVKGRQIIDAILIANEAIDYWRVKK-TKGF-VIKLDIEKAFDKLNWKFIDFMLMKKGYP 61
+F+ GR D I+ EA+ R KK KG+ ++KLD+EKA+D++ W +++ L+ G+P
Sbjct: 19 SFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAYDRIRWDYLEDTLISAGFP 78
Query: 62 IKW 63
W
Sbjct: 79 EVW 81
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0039770.1 | 0.0e+00 | 81.04 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK247... | [more] |
XP_016902461.1 | 0.0e+00 | 80.90 | PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | [more] |
TYK06777.1 | 0.0e+00 | 80.60 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0040037.1 | 1.1e-267 | 80.15 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0041367.1 | 2.6e-251 | 82.18 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P0C2F6 | 1.7e-35 | 28.85 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
O00370 | 7.7e-25 | 29.85 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P11369 | 7.2e-23 | 26.04 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P08548 | 2.6e-20 | 25.97 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
Q05118 | 2.6e-12 | 24.68 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DM72 | 0.0e+00 | 81.04 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A1S4E2K5 | 0.0e+00 | 80.90 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC1079... | [more] |
A0A5D3C4J1 | 0.0e+00 | 80.60 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TES3 | 5.5e-268 | 80.15 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TI93 | 1.2e-251 | 82.18 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
AT3G24255.1 | 1.1e-21 | 23.45 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
ATMG01250.1 | 5.0e-11 | 47.76 | RNA-directed DNA polymerase (reverse transcriptase) | [more] |
AT4G20520.1 | 8.3e-06 | 38.10 | RNA binding;RNA-directed DNA polymerases | [more] |