Cmc05g0140181 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0140181
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein NIM1-INTERACTING 1-like
Location	CMiso1.1chr05: 24657288 .. 24658415 (+)
RNA-Seq Expression	Cmc05g0140181
Synteny	Cmc05g0140181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCACTTTTTCTCTCTACTTTGTTCATTATCCAAATTTGTAGTATACCCCAAGATGATGAGGCTATACAAATACATAAAATAACATACAGAAACCCAATTACTTTTTAATTCTTTCAGTAAAACTTTCCACATGTCTCTGCCAAAACCTGTCTTCAACAGTTCTATGTGAATCATCTCTCTCTCTCTCCCTCTCTCTCTCGCTAATCCATTTCCACCGGCTATGGAAGGAGAAAGAAAAAGAAGAAAATTACAGAATAATGAGAAAGAAGAAGAGGAAGAAAATGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATAGAATTGTTCTATGCTTTGATTCAAAACACAAAGGCCATGAGAGACAGAACGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATTAAAAGGGGTTTGGAATCCGAAGTTTCAACCAGAAGATTTCATTGAAGAAGATGGTTATTACAATAGTAAATCCAACGTAACTCCTCTTCAACTATCAGCCGCTTCATCTTCAACAACAAAACAGAGCAATGAACAGAAACAACAACAAGAACAAGGTGAAGATGAAGATAAGGTAGGAAAAGGGAAAAATGGGCTTGACCTTAATCTCTCTCTTTGATTTTTTGTTTTTGTTTTTGTTTTTGTGTTTTTTTTTTTTTTTTTTTTTTTGCTTTTCTGTGTGTTATGAACACTGTTTTATAATGGGTTGTTCCTGGTTTTCCTTTATCCAAATTTGGTCGTTATCATCTTAGCATTTTTGTTTATATGCTTTTGAGCTTGCTCTGTTACTTGTGTTCTGTTTCCATTGAGCATTTGAAGAACCTTTTTTTGGTATTCTAAGTGGCAAATTTTAATGTAACTTTCCATTGAAGACAAAGGTGATTGTGAGAATGAAGCAATGCTTTTAAAGGACCGAGAGTGAGGTTAATAAATATGAAGTTAATATGGTCGAGTTAGTATGCTTGTATTTAAGTATAGAGGTCTAAGACTGACTCGTTAGAATCGAAAGAAGTAGATTAAGAAAGTAAGATTTAACTACAAGTTTATTAGTGTTTAATATTGAAACTGAGTCATTTACGCCAACGCTCTAAGTGAAATCTCGATTTTAATCCAATCTCATCTTTCT

mRNA sequence

TTGCACTTTTTCTCTCTACTTTGTTCATTATCCAAATTTGTAGTATACCCCAAGATGATGAGGCTATACAAATACATAAAATAACATACAGAAACCCAATTACTTTTTAATTCTTTCAGTAAAACTTTCCACATGTCTCTGCCAAAACCTGTCTTCAACAGTTCTATGTGAATCATCTCTCTCTCTCTCCCTCTCTCTCTCGCTAATCCATTTCCACCGGCTATGGAAGGAGAAAGAAAAAGAAGAAAATTACAGAATAATGAGAAAGAAGAAGAGGAAGAAAATGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATAGAATTGTTCTATGCTTTGATTCAAAACACAAAGGCCATGAGAGACAGAACGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATTAAAAGGGGTTTGGAATCCGAAGTTTCAACCAGAAGATTTCATTGAAGAAGATGGTTATTACAATAGTAAATCCAACGTAACTCCTCTTCAACTATCAGCCGCTTCATCTTCAACAACAAAACAGAGCAATGAACAGAAACAACAACAAGAACAAGGTGAAGATGAAGATAAGGTAGGAAAAGGGAAAAATGGGCTTGACCTTAATCTCTCTCTTTGATTTTTTGTTTTTGTTTTTGTTTTTGTGTTTTTTTTTTTTTTTTTTTTTTTGCTTTTCTGTGTGTTATGAACACTGTTTTATAATGGGTTGTTCCTGGTTTTCCTTTATCCAAATTTGGTCGTTATCATCTTAGCATTTTTGTTTATATGCTTTTGAGCTTGCTCTGTTACTTGTGTTCTGTTTCCATTGAGCATTTGAAGAACCTTTTTTTGGTATTCTAAGTGGCAAATTTTAATGTAACTTTCCATTGAAGACAAAGGTGATTGTGAGAATGAAGCAATGCTTTTAAAGGACCGAGAGTGAGGTTAATAAATATGAAGTTAATATGGTCGAGTTAGTATGCTTGTATTTAAGTATAGAGGTCTAAGACTGACTCGTTAGAATCGAAAGAAGTAGATTAAGAAAGTAAGATTTAACTACAAGTTTATTAGTGTTTAATATTGAAACTGAGTCATTTACGCCAACGCTCTAAGTGAAATCTCGATTTTAATCCAATCTCATCTTTCT

Coding sequence (CDS)

ATGGAAGGAGAAAGAAAAAGAAGAAAATTACAGAATAATGAGAAAGAAGAAGAGGAAGAAAATGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATAGAATTGTTCTATGCTTTGATTCAAAACACAAAGGCCATGAGAGACAGAACGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATTAAAAGGGGTTTGGAATCCGAAGTTTCAACCAGAAGATTTCATTGAAGAAGATGGTTATTACAATAGTAAATCCAACGTAACTCCTCTTCAACTATCAGCCGCTTCATCTTCAACAACAAAACAGAGCAATGAACAGAAACAACAACAAGAACAAGGTGAAGATGAAGATAAGGTAGGAAAAGGGAAAAATGGGCTTGACCTTAATCTCTCTCTTTGA

Protein sequence

MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEEEKLKGVWNPKFQPEDFIEEDGYYNSKSNVTPLQLSAASSSTTKQSNEQKQQQEQGEDEDKVGKGKNGLDLNLSL

Homology

[Close]

BLAST of Cmc05g0140181 vs. NCBI nr
Match: KGN61024.1 (hypothetical protein Csa_021295 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 2.5e-33
Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEEEK 60
           ME  RKRRKLQ          EEEEEEE++K+ELFYALIQNTKAMRD  KYSKELTEEEK
Sbjct: 1   MESGRKRRKLQ----------EEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEK 60

Query: 61  LKGVWNPKFQPEDFIEEDGY-YNSKSNVTPLQLSAASSSTTKQSNEQKQQQEQGEDEDKV 120
            KGVWNPKFQPEDF EEDGY YN+KSN+ PLQLSAASSSTTKQ NE+KQQ+E  +   KV
Sbjct: 61  SKGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEE--DKHYKV 120

Query: 121 GKGKNGLDLNLSL 133
            + K GLDLNLSL
Sbjct: 121 VEVKKGLDLNLSL 121

[Close]

BLAST of Cmc05g0140181 vs. NCBI nr
Match: XP_038889660.1 (protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-22
Identity = 80/120 (66.67%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEEEK 60
           ME  RKRRKL        EE EEE+++EE +++L +ALIQN KAMR R K SKE  EEEK
Sbjct: 1   MERGRKRRKL--------EEEEEEDDDEEGEMKLVFALIQNIKAMRGRMK-SKESPEEEK 60

Query: 61  LKGVWNPKFQPEDFIEEDGYYNSKSNVTPLQLSAASSSTTKQSNEQKQQQEQGEDEDKVG 120
            KGVWNPKFQPEDFI EDGYYN+KSN+T LQL AASSSTTK SN +K+QQEQ +D+ KVG
Sbjct: 61  SKGVWNPKFQPEDFI-EDGYYNNKSNIT-LQLPAASSSTTKHSNPKKEQQEQ-QDKHKVG 108

[Close]

BLAST of Cmc05g0140181 vs. NCBI nr
Match: KAG6599168.1 (hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-21
Identity = 79/141 (56.03%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEK--EEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEE 60
           MEG RKRRKLQN E+  ++EEE+E+E+E+EE+K++LF+ALIQNTKAMRD+ K  +   E+
Sbjct: 1   MEGGRKRRKLQNIEEDDDDEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEED 60

Query: 61  EKLKGVWNPKFQPEDFIEEDGYYNSKS-NVTPLQLSAASSSTTKQSN------EQKQQQE 120
              KGVWNPKFQPEDFI EDG+   KS +   ++L AASSS TKQSN      E ++ QE
Sbjct: 61  NPTKGVWNPKFQPEDFI-EDGFDTHKSKSKAAIELGAASSSATKQSNQKEEHQEHQEHQE 120

Query: 121 QGEDEDKVGKGKNGLDLNLSL 133
             E ++++ + K GLDLNLSL
Sbjct: 121 HQEHQEQLEEPKKGLDLNLSL 140

[Close]

BLAST of Cmc05g0140181 vs. NCBI nr
Match: XP_038889662.1 (protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20
Identity = 78/118 (66.10%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEEEK 60
           ME  RKRRKL        EE EEE+++EE +++L +ALIQN KAMR R K SKE  EEEK
Sbjct: 1   MERGRKRRKL--------EEEEEEDDDEEGEMKLVFALIQNIKAMRGRMK-SKESPEEEK 60

Query: 61  LKGVWNPKFQPEDFIEEDGYYNSKSNVTPLQLSAASSSTTKQSNEQKQQQEQGEDEDK 119
            KGVWNPKFQPEDFI EDGYYN+KSN+T LQL AASSSTTK SN +K+QQEQ +D+ K
Sbjct: 61  SKGVWNPKFQPEDFI-EDGYYNNKSNIT-LQLPAASSSTTKHSNPKKEQQEQ-QDKHK 106

[Close]

BLAST of Cmc05g0140181 vs. NCBI nr
Match: XP_038889661.1 (protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20
Identity = 78/118 (66.10%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEEEK 60
           ME  RKRRKL        EE EEE+++EE +++L +ALIQN KAMR R K SKE  EEEK
Sbjct: 1   MERGRKRRKL--------EEEEEEDDDEEGEMKLVFALIQNIKAMRGRMK-SKESPEEEK 60

Query: 61  LKGVWNPKFQPEDFIEEDGYYNSKSNVTPLQLSAASSSTTKQSNEQKQQQEQGEDEDK 119
            KGVWNPKFQPEDFI EDGYYN+KSN+T LQL AASSSTTK SN +K+QQEQ +D+ K
Sbjct: 61  SKGVWNPKFQPEDFI-EDGYYNNKSNIT-LQLPAASSSTTKHSNPKKEQQEQ-QDKHK 106

[Close]

BLAST of Cmc05g0140181 vs. ExPASy TrEMBL
Match: A0A0A0LJ23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEEEK 60
           ME  RKRRKLQ          EEEEEEE++K+ELFYALIQNTKAMRD  KYSKELTEEEK
Sbjct: 1   MESGRKRRKLQ----------EEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEK 60

Query: 61  LKGVWNPKFQPEDFIEEDGY-YNSKSNVTPLQLSAASSSTTKQSNEQKQQQEQGEDEDKV 120
            KGVWNPKFQPEDF EEDGY YN+KSN+ PLQLSAASSSTTKQ NE+KQQ+E  +   KV
Sbjct: 61  SKGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEE--DKHYKV 120

Query: 121 GKGKNGLDLNLSL 133
            + K GLDLNLSL
Sbjct: 121 VEVKKGLDLNLSL 121

[Close]

BLAST of Cmc05g0140181 vs. ExPASy TrEMBL
Match: A0A6J1DQG7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia OX=3673 GN=LOC111023284 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.7e-17
Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTEEEK 60
           ME  R++RKLQ++EKE ++E+EEEEE    K++LF+ALIQNTK++RDR K  +   +++K
Sbjct: 1   MESVRRKRKLQDDEKEAQKEDEEEEE----KMKLFFALIQNTKSIRDRVKSKQSAPQQDK 60

Query: 61  LKGVWNPKFQPEDFIEEDGYYNSKSNVTPLQLSAASSSTTKQSNEQKQQQEQGEDEDKVG 120
            KGVWNPKFQPEDFIE+    + KSN TP     A+SS+TKQ N+Q +++EQG+D+    
Sbjct: 61  SKGVWNPKFQPEDFIED---CDKKSNPTP---QFAASSSTKQRNKQ-EEEEQGKDK---V 118

Query: 121 KGKNGLDLNLSL 133
           +G   LDLNLSL
Sbjct: 121 EGIEDLDLNLSL 118

[Close]

BLAST of Cmc05g0140181 vs. ExPASy TrEMBL
Match: A0A5C7GWM2 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_024772 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 66/167 (39.52%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 4   ERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYS----------- 63
           ERK+RK++N       E EEEEE EE+K+E FYAL++NTK +RDR + S           
Sbjct: 8   ERKKRKMEN-------EEEEEEENEEEKMEQFYALLRNTKDVRDRLRSSSTSSTGLHGSP 67

Query: 64  --------------------KELTEEEKLKGVWNPKFQPEDFIEEDGYYNSKSNVTPLQL 123
                               K+  EE+ L  VWNP FQPEDF+ ED    +KSN   L  
Sbjct: 68  IPSIPSMEINNNNNKQDQEKKKQLEEKALSAVWNPSFQPEDFM-EDRNVIAKSNTVNLGS 127

Query: 124 SAA---SSSTTKQSNEQKQQQEQGEDEDKVGKGKN----GLDLNLSL 133
           +++   ++S +++ NE+ QQQ+Q E++DK   GK+     LDLNLSL
Sbjct: 128 TSSTQLAASASQEKNEEPQQQQQQEEDDKKDGGKDNNNLALDLNLSL 166

[Close]

BLAST of Cmc05g0140181 vs. ExPASy TrEMBL
Match: A0A6P9EP42 (protein NIM1-INTERACTING 1-like OS=Juglans regia OX=51240 GN=LOC108987715 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.2e-10
Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKEEEEENEEEEEEEEKKIELFYALIQNTKAMRDRTKYSKELTE--- 60
           MEGERK+RK+      E EE E++E++EEKKI+ F+ LI++T+ +RDR + S    E   
Sbjct: 1   MEGERKKRKIL-----ESEEGEDDEDDEEKKIQKFFDLIRSTREVRDRLRSSTGFNESKD 60

Query: 61  --------EEKLKG--VWNPKFQPEDFIEEDGYYNSKSNVTP--LQLSAASSSTTKQSNE 120
                   E+++KG  VWNP FQPEDFI++D    S  + +P   Q    S STTK + E
Sbjct: 61  QKEEKTRVEKEIKGITVWNPTFQPEDFIQDD---KSSKSTSPGATQQPGPSKSTTKGNEE 120

Query: 121 QKQQQEQGEDEDKVGKGKNGLDLNLSL 133
                   ED+D+   G +GLDLNLSL
Sbjct: 121 --------EDQDRSEDGNHGLDLNLSL 131

[Close]

BLAST of Cmc05g0140181 vs. ExPASy TrEMBL
Match: A0A061F4Z3 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026807 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-09
Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 0


Query: 1   MEGERKRRKLQNNEKE---EEEENEEEEEEEEKKIELFYALIQNTKAMRDRTK------- 60
           ME  RK+RK+ N E+E   EEEE E++EEEEE+K+E F+ALI++T+ MRDR +       
Sbjct: 1   MESGRKKRKMGNQEEEEDDEEEEEEDDEEEEEEKVEKFFALIRSTREMRDRLRNVPNGSK 60

Query: 61  --YSKELTEEEKLKGVWNPKFQPEDFIEEDGYYNSKSNVTPLQLSAASSSTTKQSNEQKQ 120
               ++  EE+++  VWNPKFQPEDF+E+    +   N+  +  +  SS+         +
Sbjct: 61  EEEERKKQEEKQVAAVWNPKFQPEDFMED----SKPKNLLAVNEAGPSSN---------R 120

Query: 121 QQEQGEDEDKVGKGKNGLDLNLSL 133
           +QEQG+D  K G    GLDL LSL
Sbjct: 121 EQEQGQD-TKEGGEDGGLDLKLSL 130

The following BLAST results are available for this feature:

BLAST of Cmc05g0140181 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61024.1	2.5e-33	72.93	hypothetical protein Csa_021295 [Cucumis sativus]	[more]
XP_038889660.1	7.5e-22	66.67	protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]	[more]
KAG6599168.1	1.3e-21	56.03	hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038889662.1	1.4e-20	66.10	protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]	[more]
XP_038889661.1	1.4e-20	66.10	protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]	[more]

BLAST of Cmc05g0140181 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc05g0140181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ23	1.2e-33	72.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1	[more]
A0A6J1DQG7	2.7e-17	53.79	LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia...	[more]
A0A5C7GWM2	1.9e-10	39.52	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_024772 PE=3 SV=1	[more]
A0A6P9EP42	3.2e-10	42.86	protein NIM1-INTERACTING 1-like OS=Juglans regia OX=51240 GN=LOC108987715 PE=3 S...	[more]
A0A061F4Z3	1.2e-09	42.36	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026807 PE=3 SV=1	[more]

BLAST of Cmc05g0140181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR33669:SF4	PROTEIN NIM1-INTERACTING 3	coord: 3..132
IPR031425	NPR1/NH1-interacting protein	PFAM	PF15699	NPR1_interact	coord: 24..129 e-value: 3.5E-20 score: 72.7
IPR031425	NPR1/NH1-interacting protein	PANTHER	PTHR33669	PROTEIN NEGATIVE REGULATOR OF RESISTANCE	coord: 3..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0140181.1	Cmc05g0140181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010112	regulation of systemic acquired resistance
cellular_component	GO:0005634	nucleus