Cmc05g0136521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0136521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr05: 19765458 .. 19766545 (-)
RNA-Seq Expression	Cmc05g0136521
Synteny	Cmc05g0136521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGGAAGTACCCCGATGTTTTCCCTTATGAGCTCTCTGGACTTCCATCTCACAGGGAGATAGAATTCGCCATCGAGTTAGAGCCAGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTGAAAGAGCTGAAGGTACAACTGCAGAAGTTGCTGGACAAGGGTTTCATCCAAACCAATGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAAAGCTGAACAAGGTGACAGTCAAGAACCGTTACCCCTTGTCCAGGATTGATGACTTGTTTGATTAGTTGCATGAAGCCACCGTCTTTTCTAAGATCGACCTGGATCAGGCTATCACCAGTTGAGGATCAGGGATAGTGATATCCCTAAGACGGCTTTCCGTTCCAGATACGGACACTACGAGTTCATCGTGGTGTCCTTTGGTTTGACTAATGCTTCTGCGGTATTCATAGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTTTCATAGTTTTCATTGACGACATTTTGATTTACTCTAAGACTGAGGCTGAGCACCTGGAGCATTTGCATCGGGTTTTGAAGACTCTTCGAGCCAATAAACTGTATGTCAAGTTCTCCAAGTGTGAGTTCTGGTTGAAGAAGGTGACTTTCCTCGGCCACATGGTTTTCAGTGAGGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAGTTGGCCTCGACCGTCGACAGTTAGCGAGATTCGTAGTTTTTTGGGTTTGGCAGGCTACTACAGGAGGTTCATGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACTCAGTTGACTAGGAAGGGGACCCCTTTTGTTTGGAGCCCAACTTGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAACTTGTGTCTGCACCAGTTCTGACAGTGCCAGATGGATCGGGGAGCTTTGTGATCTACAGTGATACCTCCAAGAAAGGACTGGGTTGCGTGATGATGCAGCAGGGCACGGTAGTTGTTTATGCCTTCCGTCAGTTGAAGAGTCACTAA

mRNA sequence

ATGGTAAGGAAGTACCCCGATGTTTTCCCTTATGAGCTCTCTGGACTTCCATCTCACAGGGAGATAGAATTCGCCATCGAGTTAGAGCCAGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTGAAAGAGCTGAAGGTACAACTGCAGAAGTTGCTGGACAAGGGTTTCATCCAAACCAATGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAAAGCTGAACAAGGTGACAGTCAAGAACCGCTATCACCAGTTGAGGATCAGGGATAGTGATATCCCTAAGACGGCTTTCCGTTCCAGATACGGACACTACGAGTTCATCGTGGTGTCCTTTGGTTTGACTAATGCTTCTGCGGTATTCATAGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTTTCATAGTTTTCATTGACGACATTTTGATTTACTCTAAGACTGAGGCTGAGCACCTGGAGCATTTGCATCGGGTTTTGAAGACTCTTCGAGCCAATAAACTGTATGTCAAGTTCTCCAAGTGTGAGTTCTGGTTGAAGAAGGTGACTTTCCTCGGCCACATGGTTTTCAGTGAGGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAGTTGGCCTCGACCGTCGACAGTTAGCGAGATTCGTAGTTTTTTGGGTTTGGCAGGCTACTACAGGAGGTTCATGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACTCAGTTGACTAGGAAGGGGACCCCTTTTGTTTGGAGCCCAACTTGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAACTTGTGTCTGCACCAGTTCTGACAGTGCCAGATGGATCGGGGAGCTTTGTGATCTACAGTGATACCTCCAAGAAAGGACTGGGTTGCGTGATGATGCAGCAGGGCACGGTAGTTGTTTATGCCTTCCGTCAGTTGAAGAGTCACTAA

Coding sequence (CDS)

ATGGTAAGGAAGTACCCCGATGTTTTCCCTTATGAGCTCTCTGGACTTCCATCTCACAGGGAGATAGAATTCGCCATCGAGTTAGAGCCAGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTGAAAGAGCTGAAGGTACAACTGCAGAAGTTGCTGGACAAGGGTTTCATCCAAACCAATGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAAAGCTGAACAAGGTGACAGTCAAGAACCGCTATCACCAGTTGAGGATCAGGGATAGTGATATCCCTAAGACGGCTTTCCGTTCCAGATACGGACACTACGAGTTCATCGTGGTGTCCTTTGGTTTGACTAATGCTTCTGCGGTATTCATAGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTTTCATAGTTTTCATTGACGACATTTTGATTTACTCTAAGACTGAGGCTGAGCACCTGGAGCATTTGCATCGGGTTTTGAAGACTCTTCGAGCCAATAAACTGTATGTCAAGTTCTCCAAGTGTGAGTTCTGGTTGAAGAAGGTGACTTTCCTCGGCCACATGGTTTTCAGTGAGGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAGTTGGCCTCGACCGTCGACAGTTAGCGAGATTCGTAGTTTTTTGGGTTTGGCAGGCTACTACAGGAGGTTCATGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACTCAGTTGACTAGGAAGGGGACCCCTTTTGTTTGGAGCCCAACTTGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAACTTGTGTCTGCACCAGTTCTGACAGTGCCAGATGGATCGGGGAGCTTTGTGATCTACAGTGATACCTCCAAGAAAGGACTGGGTTGCGTGATGATGCAGCAGGGCACGGTAGTTGTTTATGCCTTCCGTCAGTTGAAGAGTCACTAA

Protein sequence

MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDKGFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNRYHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSEGVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLKSH

Homology

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BLAST of Cmc05g0136521 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 595.1 bits (1533), Expect = 3.7e-166
Identity = 299/362 (82.60%), Postives = 320/362 (88.40%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 518 VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 577

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 578 GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 637

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRDSDIPKTAFR RYGHYEFIV+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 638 SKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD 697

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 698 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 757

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVSVDPAKIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTR+GTPFVW
Sbjct: 758 GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTREGTPFVW 817

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SPTCESSFQ+LKQKLV+APVLTVPDGSGSFVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 818 SPTCESSFQKLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 877

[Close]

BLAST of Cmc05g0136521 vs. NCBI nr
Match: KAA0056047.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 593.2 bits (1528), Expect = 1.4e-165
Identity = 299/362 (82.60%), Postives = 319/362 (88.12%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  REI+FAIELEPGTAPISRAPYRMAP ELKELKVQLQ+LLDK
Sbjct: 445 VVREYPDVFPDELPGLPPPREIDFAIELEPGTAPISRAPYRMAPVELKELKVQLQELLDK 504

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 505 GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVF 564

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRDSDIPKTAFRSRY HYEFIV+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 565 SKIDLQSGYHQLRIRDSDIPKTAFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD 624

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLYVKFSKCEFWLKKVTFLGH+V SE
Sbjct: 625 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSE 684

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVS+DPAKIEAVT+WPRPSTVSEI+SFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVW
Sbjct: 685 GVSMDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW 744

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SP CESSFQELKQKLV+APVLT+PDGSGSFVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 745 SPACESSFQELKQKLVTAPVLTLPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 804

[Close]

BLAST of Cmc05g0136521 vs. NCBI nr
Match: KAA0063946.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 592.8 bits (1527), Expect = 1.8e-165
Identity = 298/362 (82.32%), Postives = 319/362 (88.12%), Query Frame = 0


Query: 1    MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
            +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 784  VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 843

Query: 61   GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
            GFI+++VSPWGA VLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 844  GFIRSSVSPWGARVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 903

Query: 121  --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                    YHQLRIRDSDIPKTAFRSRYGHYEF+V+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 904  SKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD 963

Query: 181  TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
            +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 964  SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 1023

Query: 241  GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
            GVSVDPAKIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSR ASPLTQLTRKGTPFVW
Sbjct: 1024 GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRKASPLTQLTRKGTPFVW 1083

Query: 301  SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
            SP CESSFQELKQKLV+APVLTVPDGSGSFVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 1084 SPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 1143

[Close]

BLAST of Cmc05g0136521 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 592.0 bits (1525), Expect = 3.1e-165
Identity = 297/362 (82.04%), Postives = 317/362 (87.57%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 530 VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 589

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 590 GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVF 649

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRD DIPKTAFRSRYGHYEF+V+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 650 SKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD 709

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 710 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 769

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVSVDPAKIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVW
Sbjct: 770 GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW 829

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SP CESSFQELKQKLV APVLTVPDGSG+FVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 830 SPACESSFQELKQKLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 889

[Close]

BLAST of Cmc05g0136521 vs. NCBI nr
Match: TYK05193.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 590.5 bits (1521), Expect = 9.1e-165
Identity = 296/362 (81.77%), Postives = 317/362 (87.57%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 601 VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 660

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGA VLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 661 GFIRPSVSPWGARVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 720

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRD DIPKTAFRSRYGHYEF+V+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 721 SKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD 780

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 781 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 840

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVSVDP KIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVW
Sbjct: 841 GVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW 900

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SP CESSFQELKQKLV+APVLTVPDGSG+FVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 901 SPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 960

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BLAST of Cmc05g0136521 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.6e-55
Identity = 123/368 (33.42%), Postives = 204/368 (55.43%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +++KY D+  +E   L    + +  I  +      S+  Y  A  +  E++ Q+Q +L++
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQ--EVESQIQDMLNQ 235

Query: 61  GFIQTNVSPWGAPVLFV-KKKDGS----MRLCIDYRKLNKVTVKNR-------------- 120
           G I+T+ SP+ +P+  V KK+D S     R+ IDYRKLN++TV +R              
Sbjct: 236 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 295

Query: 121 -------------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVF 180
                        +HQ+ +    + KTAF +++GHYE++ + FGL NA A F   MN + 
Sbjct: 296 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDIL 355

Query: 181 KDFLDTFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGH 240
           +  L+   +V++DDI+++S +  EHL+ L  V + L    L ++  KCEF  ++ TFLGH
Sbjct: 356 RPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGH 415

Query: 241 MVFSEGVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKG 300
           ++  +G+  +P KIEA+  +P P+   EI++FLGL GYYR+F+ +F+ IA P+T+  +K 
Sbjct: 416 VLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKN 475

Query: 301 TPF-VWSPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVY 336
                 +P  +S+F++LK  +   P+L VPD +  F + +D S   LG V+ Q G  + Y
Sbjct: 476 MKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSY 535

[Close]

BLAST of Cmc05g0136521 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.2e-52
Identity = 114/336 (33.93%), Postives = 182/336 (54.17%), Query Frame = 0


Query: 33  APISRAPYRMAPAELKELKVQLQKLLDKGFIQTNVSPWGAPVLFVKKKD-----GSMRLC 92
           +PI    Y +A     E++ Q+Q++L++G I+ + SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 93  IDYRKLNKVTVKNRY---------------------------HQLRIRDSDIPKTAFRSR 152
           IDYRKLN++T+ +RY                           HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 153 YGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHLEHLHRV 212
            GHYE++ + FGL NA A F   MN + +  L+   +V++DDI+I+S +  EHL  +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 213 LKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSEGVSVDPAKIEAVTSWPRPSTVSEIRSF 272
              L    L ++  KCEF  K+  FLGH+V  +G+  +P K++A+ S+P P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 273 LGLAGYYRRFMEDFSRIASPLTQLTRKGTPF-VWSPTCESSFQELKQKLVSAPVLTVPDG 332
           LGL GYYR+F+ +++ IA P+T   +K T           +F++LK  ++  P+L +PD 
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 333 SGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLKSH 336
              FV+ +D S   LG V+ Q G  + +  R L  H
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDH 540

[Close]

BLAST of Cmc05g0136521 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 8.0e-47
Identity = 113/346 (32.66%), Postives = 181/346 (52.31%), Query Frame = 0


Query: 3   RKYPDVFPYELSGLP---SHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLD 62
           +KY ++   +L   P   ++  ++  IE++PG       PY +     +E+   +QKLLD
Sbjct: 588 QKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLD 647

Query: 63  KGFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVK-------------------- 122
             FI  + SP  +PV+ V KKDG+ RLC+DYR LNK T+                     
Sbjct: 648 NKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQI 707

Query: 123 -------NRYHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFL 182
                  + YHQ+ +   D  KTAF +  G YE+ V+ FGL NA + F   M   F+D  
Sbjct: 708 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL- 767

Query: 183 DTFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFS 242
             F  V++DDILI+S++  EH +HL  VL+ L+   L VK  KC+F  ++  FLG+ +  
Sbjct: 768 -RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGI 827

Query: 243 EGVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFV 302
           + ++    K  A+  +P P TV + + FLG+  YYRRF+ + S+IA P+       +   
Sbjct: 828 QKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ-- 887

Query: 303 WSPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVM 319
           W+   + + ++LK  L ++PVL   +   ++ + +D SK G+G V+
Sbjct: 888 WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVL 929

[Close]

BLAST of Cmc05g0136521 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-46
Identity = 112/366 (30.60%), Postives = 190/366 (51.91%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGT---APISRAPYRMAPAELKELKVQLQKL 60
           ++ ++P +F   LSG+     +E A++ E  T    PI    Y        E++ Q+ +L
Sbjct: 91  LLGEFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDEL 150

Query: 61  LDKGFIQTNVSPWGAPVLFVKKK-----DGSMRLCIDYRKLNKVTVKNRY---------- 120
           L  G I+ + SP+ +P+  V KK     +   R+ +D+++LN VT+ + Y          
Sbjct: 151 LQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLA 210

Query: 121 -----------------HQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMN 180
                            HQ+ +++SDIPKTAF +  G YEF+ + FGL NA A+F  +++
Sbjct: 211 SLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMID 270

Query: 181 RVFKDFLDTFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTF 240
            + ++ +     V+IDDI+++S+    H ++L  VL +L    L V   K  F   +V F
Sbjct: 271 DILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEF 330

Query: 241 LGHMVFSEGVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLT 300
           LG++V ++G+  DP K+ A++  P P++V E++ FLG+  YYR+F++D++++A PLT LT
Sbjct: 331 LGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLT 390

Query: 301 R-----------KGTPFVWSPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGL 321
           R              P     T   SF +LK  L S+ +L  P  +  F + +D S   +
Sbjct: 391 RGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAI 450

[Close]

BLAST of Cmc05g0136521 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-46
Identity = 113/346 (32.66%), Postives = 180/346 (52.02%), Query Frame = 0


Query: 3   RKYPDVFPYELSGLP---SHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLD 62
           +KY ++   +L   P   ++  ++  IE++PG       PY +     +E+   +QKLLD
Sbjct: 562 QKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLD 621

Query: 63  KGFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVK-------------------- 122
             FI  + SP  +PV+ V KKDG+ RLC+DYR LNK T+                     
Sbjct: 622 NKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQI 681

Query: 123 -------NRYHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFL 182
                  + YHQ+ +   D  KTAF +  G YE+ V+ FGL NA + F   M   F+D  
Sbjct: 682 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL- 741

Query: 183 DTFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFS 242
             F  V++DDILI+S++  EH +HL  VL+ L+   L VK  KC+F  ++  FLG+ +  
Sbjct: 742 -RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGI 801

Query: 243 EGVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFV 302
           + ++    K  A+  +P P TV + + FLG+  YYRRF+ + S+IA P+       +   
Sbjct: 802 QKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ-- 861

Query: 303 WSPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVM 319
           W+   + +  +LK  L ++PVL   +   ++ + +D SK G+G V+
Sbjct: 862 WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVL 903

[Close]

BLAST of Cmc05g0136521 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.8e-166
Identity = 299/362 (82.60%), Postives = 320/362 (88.40%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 518 VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 577

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 578 GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 637

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRDSDIPKTAFR RYGHYEFIV+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 638 SKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD 697

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 698 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 757

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVSVDPAKIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTR+GTPFVW
Sbjct: 758 GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTREGTPFVW 817

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SPTCESSFQ+LKQKLV+APVLTVPDGSGSFVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 818 SPTCESSFQKLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 877

[Close]

BLAST of Cmc05g0136521 vs. ExPASy TrEMBL
Match: A0A5A7UN68 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G002110 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 6.8e-166
Identity = 299/362 (82.60%), Postives = 319/362 (88.12%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  REI+FAIELEPGTAPISRAPYRMAP ELKELKVQLQ+LLDK
Sbjct: 445 VVREYPDVFPDELPGLPPPREIDFAIELEPGTAPISRAPYRMAPVELKELKVQLQELLDK 504

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 505 GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVF 564

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRDSDIPKTAFRSRY HYEFIV+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 565 SKIDLQSGYHQLRIRDSDIPKTAFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD 624

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLYVKFSKCEFWLKKVTFLGH+V SE
Sbjct: 625 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSE 684

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVS+DPAKIEAVT+WPRPSTVSEI+SFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVW
Sbjct: 685 GVSMDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW 744

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SP CESSFQELKQKLV+APVLT+PDGSGSFVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 745 SPACESSFQELKQKLVTAPVLTLPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 804

[Close]

BLAST of Cmc05g0136521 vs. ExPASy TrEMBL
Match: A0A5A7VBY3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00920 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.9e-166
Identity = 298/362 (82.32%), Postives = 319/362 (88.12%), Query Frame = 0


Query: 1    MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
            +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 784  VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 843

Query: 61   GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
            GFI+++VSPWGA VLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 844  GFIRSSVSPWGARVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 903

Query: 121  --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                    YHQLRIRDSDIPKTAFRSRYGHYEF+V+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 904  SKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD 963

Query: 181  TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
            +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 964  SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 1023

Query: 241  GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
            GVSVDPAKIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSR ASPLTQLTRKGTPFVW
Sbjct: 1024 GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRKASPLTQLTRKGTPFVW 1083

Query: 301  SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
            SP CESSFQELKQKLV+APVLTVPDGSGSFVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 1084 SPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 1143

[Close]

BLAST of Cmc05g0136521 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.5e-165
Identity = 297/362 (82.04%), Postives = 317/362 (87.57%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 530 VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 589

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 590 GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVF 649

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRD DIPKTAFRSRYGHYEF+V+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 650 SKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD 709

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 710 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 769

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVSVDPAKIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVW
Sbjct: 770 GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW 829

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SP CESSFQELKQKLV APVLTVPDGSG+FVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 830 SPACESSFQELKQKLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 889

[Close]

BLAST of Cmc05g0136521 vs. ExPASy TrEMBL
Match: A0A5D3BZN1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00670 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.4e-165
Identity = 296/362 (81.77%), Postives = 317/362 (87.57%), Query Frame = 0


Query: 1   MVRKYPDVFPYELSGLPSHREIEFAIELEPGTAPISRAPYRMAPAELKELKVQLQKLLDK 60
           +VR+YPDVFP EL GLP  RE++FAIELEPGTAPISRAPYRMAPAELKELKVQLQ+LLDK
Sbjct: 601 VVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDK 660

Query: 61  GFIQTNVSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNR------------------- 120
           GFI+ +VSPWGA VLFVKKKDGSMRLCIDYR+LNKVTVKNR                   
Sbjct: 661 GFIRPSVSPWGARVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 720

Query: 121 --------YHQLRIRDSDIPKTAFRSRYGHYEFIVVSFGLTNASAVFIDLMNRVFKDFLD 180
                   YHQLRIRD DIPKTAFRSRYGHYEF+V+SFGLTNA AVF+DLMNRVFKDFLD
Sbjct: 721 SKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD 780

Query: 181 TFFIVFIDDILIYSKTEAEHLEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLGHMVFSE 240
           +F IVFIDDILIYSKTEAEH EHLH+VL+TLRANKLY KFSKCEFWL+KVTFLGH+V SE
Sbjct: 781 SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSE 840

Query: 241 GVSVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW 300
           GVSVDP KIEAVT+WPRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVW
Sbjct: 841 GVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW 900

Query: 301 SPTCESSFQELKQKLVSAPVLTVPDGSGSFVIYSDTSKKGLGCVMMQQGTVVVYAFRQLK 336
           SP CESSFQELKQKLV+APVLTVPDGSG+FVIYSD SKKGLGCV+MQQG VV YA RQLK
Sbjct: 901 SPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 960

[Close]

BLAST of Cmc05g0136521 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-24
Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 174 LEHLHRVLKTLRANKLYVKFSKCEFWLKKVTFLG--HMVFSEGVSVDPAKIEAVTSWPRP 233
           + HL  VL+    ++ Y    KC F   ++ +LG  H++  EGVS DPAK+EA+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 234 STVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSA 293
              +E+R FLGL GYYRRF++++ +I  PLT+L +K +   W+     +F+ LK  + + 
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTL 120

Query: 294 PVLTVPDGSGSFV 305
           PVL +PD    FV
Sbjct: 121 PVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc05g0136521 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01306.1	3.7e-166	82.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056047.1	1.4e-165	82.60	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0063946.1	1.8e-165	82.32	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	3.1e-165	82.04	pol protein [Cucumis melo var. makuwa]	[more]
TYK05193.1	9.1e-165	81.77	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0136521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	3.6e-55	33.42	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.2e-52	33.93	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q7LHG5	8.0e-47	32.66	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	1.0e-46	30.60	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	1.0e-46	32.66	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc05g0136521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSV9	1.8e-166	82.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5A7UN68	6.8e-166	82.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7VBY3	8.9e-166	82.32	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]
A0A5A7V4E4	1.5e-165	82.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5D3BZN1	4.4e-165	81.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14...	[more]

BLAST of Cmc05g0136521 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.0e-24	39.85	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 273..333 e-value: 1.0E-13 score: 51.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 220..303 e-value: 3.2E-32 score: 112.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 101..210 e-value: 1.4E-39 score: 137.6
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 22..100 e-value: 4.0E-28 score: 100.2 coord: 103..135 e-value: 1.4E-39 score: 137.6
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 34..102 coord: 100..322
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 34..102 coord: 100..322
None	No IPR available	CDD	cd01647	RT_LTR	coord: 61..210 e-value: 2.14975E-68 score: 210.144
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 120..209 e-value: 3.2E-16 score: 59.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0136521.1	Cmc05g0136521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding