Cmc05g0132221 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCCTTGTTGGCACTTGTATTCTTGGTTTTACAAATAATTTTCATTAAGCTATATGCTGATGAAGAATTAATCTCACTATTGCCAGAAACAACAGTGACAACTATTAATAAATTGGTTGGCCCAGTGATAGGGGTTCACTGTAGATCAAAGGACGATGACTTAGGAGTCCATATCATAGAGTCTGAACGTAGTTACTCCTTTCACTTTAGACCTAATATTTGGGGCACAACACAATTTACTTGCAGCTTTCAATTTGTGCAAGGCGAGATACACAACTTCACCATCTACAACTTTCACAGGGATATAAACCGTTGCACAAGTTGCATATGGGAATTTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTAGAAGTTATAATATGTGCTTTCCTTGGAACTAG ATGAATTCCTTGTTGGCACTTGTATTCTTGGTTTTACAAATAATTTTCATTAAGCTATATGCTGATGAAGAATTAATCTCACTATTGCCAGAAACAACAGTGACAACTATTAATAAATTGGTTGGCCCAGTGATAGGGGTTCACTGTAGATCAAAGGACGATGACTTAGGAGTCCATATCATAGAGTCTGAACGTAGTTACTCCTTTCACTTTAGACCTAATATTTGGGGCACAACACAATTTACTTGCAGCTTTCAATTTGTGCAAGGCGAGATACACAACTTCACCATCTACAACTTTCACAGGGATATAAACCGTTGCACAAGTTGCATATGGGAATTTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTAGAAGTTATAATATGTGCTTTCCTTGGAACTAG ATGAATTCCTTGTTGGCACTTGTATTCTTGGTTTTACAAATAATTTTCATTAAGCTATATGCTGATGAAGAATTAATCTCACTATTGCCAGAAACAACAGTGACAACTATTAATAAATTGGTTGGCCCAGTGATAGGGGTTCACTGTAGATCAAAGGACGATGACTTAGGAGTCCATATCATAGAGTCTGAACGTAGTTACTCCTTTCACTTTAGACCTAATATTTGGGGCACAACACAATTTACTTGCAGCTTTCAATTTGTGCAAGGCGAGATACACAACTTCACCATCTACAACTTTCACAGGGATATAAACCGTTGCACAAGTTGCATATGGGAATTTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTAGAAGTTATAATATGTGCTTTCCTTGGAACTAG MNSLLALVFLVLQIIFIKLYADEELISLLPETTVTTINKLVGPVIGVHCRSKDDDLGVHIIESERSYSFHFRPNIWGTTQFTCSFQFVQGEIHNFTIYNFHRDINRCTSCIWEFYRDGPCLMHPKDTRSYNMCFPWN Homology
BLAST of Cmc05g0132221 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo]) HSP 1 Score: 167.5 bits (423), Expect = 7.8e-38 Identity = 76/137 (55.47%), Postives = 103/137 (75.18%), Query Frame = 0
BLAST of Cmc05g0132221 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 8.6e-37 Identity = 73/133 (54.89%), Postives = 101/133 (75.94%), Query Frame = 0
BLAST of Cmc05g0132221 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 159.1 bits (401), Expect = 2.8e-35 Identity = 68/114 (59.65%), Postives = 89/114 (78.07%), Query Frame = 0
BLAST of Cmc05g0132221 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 1.1e-34 Identity = 72/130 (55.38%), Postives = 95/130 (73.08%), Query Frame = 0
BLAST of Cmc05g0132221 vs. NCBI nr
Match: EEF44294.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 109.4 bits (272), Expect = 2.5e-20 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.1e-21 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15 Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14 Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13 Identity = 42/131 (32.06%), Postives = 66/131 (50.38%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.8e-38 Identity = 76/137 (55.47%), Postives = 103/137 (75.18%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 4.2e-37 Identity = 73/133 (54.89%), Postives = 101/133 (75.94%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35 Identity = 68/114 (59.65%), Postives = 89/114 (78.07%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 5.1e-35 Identity = 72/130 (55.38%), Postives = 95/130 (73.08%), Query Frame = 0
BLAST of Cmc05g0132221 vs. ExPASy TrEMBL
Match: B9RWP2 (S-protein homolog OS=Ricinus communis OX=3988 GN=RCOM_1023130 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of Cmc05g0132221 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Cmc05g0132221 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 87.8 bits (216), Expect = 7.3e-18 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of Cmc05g0132221 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 85.9 bits (211), Expect = 2.8e-17 Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 0
BLAST of Cmc05g0132221 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 84.3 bits (207), Expect = 8.1e-17 Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of Cmc05g0132221 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 80.9 bits (198), Expect = 8.9e-16 Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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