Cmc05g0128311 (gene) Melon (Charmono) v1.1

Overview
NameCmc05g0128311
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr05: 5934609 .. 5938643 (-)
RNA-Seq ExpressionCmc05g0128311
SyntenyCmc05g0128311
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTTTCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAAAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTGGAGAGCCTTTATTTGACAAAGTCATTGCTAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCTTTGAAAACTAGAAACCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAACTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACATGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATTCTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAAGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCCTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTCTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAAGAACATTGGAAAGCTGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGACGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGATCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

mRNA sequence

ATGGCTTCTACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTTTCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAAAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTGGAGAGCCTTTATTTGACAAAGTCATTGCTAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCTTTGAAAACTAGAAACCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAACTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACATGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATTCTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAAGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCCTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTCTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAAGAACATTGGAAAGCTGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGACGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGATCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Coding sequence (CDS)

ATGGCTTCTACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTTTCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAAAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTGGAGAGCCTTTATTTGACAAAGTCATTGCTAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCTTTGAAAACTAGAAACCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAACTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACATGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATTCTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAAGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCCTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTCTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAAGAACATTGGAAAGCTGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGACGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGATCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Protein sequence

MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Homology
[Close]
BLAST of Cmc05g0128311 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2675.6 bits (6934), Expect = 0.0e+00
Identity = 1339/1344 (99.63%), Postives = 1341/1344 (99.78%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDI DAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLS HIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

Query: 1321 DMLTKALSAHRFKYLLDELNVKSG 1345
            DMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1321 DMLTKALSAHRFKYLLDELNVKSG 1344

[Close]
BLAST of Cmc05g0128311 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 2553.1 bits (6616), Expect = 0.0e+00
Identity = 1287/1331 (96.69%), Postives = 1291/1331 (96.99%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDI DAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLS HIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1303

[Close]
BLAST of Cmc05g0128311 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2504.2 bits (6489), Expect = 0.0e+00
Identity = 1269/1331 (95.34%), Postives = 1273/1331 (95.64%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDI DAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1283

[Close]
BLAST of Cmc05g0128311 vs. NCBI nr
Match: TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2353.6 bits (6098), Expect = 0.0e+00
Identity = 1170/1174 (99.66%), Postives = 1172/1174 (99.83%), Query Frame = 0 

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDI DAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1070
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLS HIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1310
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1311 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1345
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]
BLAST of Cmc05g0128311 vs. NCBI nr
Match: KAA0043826.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1071/1226 (87.36%), Postives = 1082/1226 (88.25%), Query Frame = 0 

Query: 111  MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMVSHRDI DAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 951  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 1010
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 1011 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1070
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1071 REKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1130
            +EKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1131 NAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1190
            NAVGSIMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1191 DKSTLLEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1250
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1251 AVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1310
            AVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

Query: 1311 KDVELVKVHTVENLSDMLTKALSAHR 1332
            KDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1201 KDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]
BLAST of Cmc05g0128311 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 1022.3 bits (2642), Expect = 4.9e-297
Identity = 563/1346 (41.83%), Postives = 826/1346 (61.37%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILD-EERLPDNITESEKRDMDEMAY 60
            M+  ++EV+KFNG   FS W++++R +L+Q  + K+LD + + PD +   +  D+DE A 
Sbjct: 1    MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 61   STILLYLSDEVL-RLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLE 120
            S I L+LSD+V+  ++DE T  G +W +LESLY++K+L NK+Y+K++ +   M +  +  
Sbjct: 61   SAIRLHLSDDVVNNIIDEDTARG-IWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFL 120

Query: 121  ENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDAL 180
             +L+ F  ++  L N+G K+ +E++A++LLNSLP +Y  +   I +G+ ++ +  V  AL
Sbjct: 121  SHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 180

Query: 181  KTRNLEIKKERKDGELLM--ARGRSEKKSWKGKERS-----FRSKSKGKSRKCFLCHKEG 240
                   KK    G+ L+   RGRS ++S     RS      +++SK + R C+ C++ G
Sbjct: 181  LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPG 240

Query: 241  HFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGY-ESAEVLMVSHRDIHDAWI 300
            HFK++CP  +  +  TS     D  N+A +    D+      E  E + +S  +    W+
Sbjct: 241  HFKRDCPNPRKGKGETSGQKNDD--NTAAMVQNNDNVVLFINEEEECMHLSGPE--SEWV 300

Query: 301  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 360
            +D+  + H TP RD    +   D G V +G+     + G G + I T+ G   +L +VR+
Sbjct: 301  VDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRH 360

Query: 361  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 420
            VP L+ NLIS   LDR G      N   ++TKGSLV  KG  R  LY        G    
Sbjct: 361  VPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNA 420

Query: 421  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 480
            A  +++    LWHKR+ H+SE+GLQ L+++ L+   K   +  C++C+ GK  RV F   
Sbjct: 421  AQDEIS--VDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTS 480

Query: 481  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 540
                  ILD V+SD+ GP +  SMGG++YF++ IDD SRK+W+Y LK KD+ F  F ++ 
Sbjct: 481  SERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFH 540

Query: 541  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 600
              VE +TGRK+K LR+DNG E+ + +F ++C S GI    TV  TPQ NG+AER NRTI+
Sbjct: 541  ALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIV 600

Query: 601  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 660
            E+ R +L  A LP  FWGEA QTACYLINRSPS  L  + P+ VWT K  S  HL+VFGC
Sbjct: 601  EKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGC 660

Query: 661  TAYAHV---KDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPY 720
             A+AHV   +  KL+ +++ C+FIGY     GY+LW  +    K I SRDV F E+E+  
Sbjct: 661  RAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLW--DPVKKKVIRSRDVVFRESEVRT 720

Query: 721  CVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILI 780
                 +K + G  +   V I S        ++    VSE     Q E  G   +Q   L 
Sbjct: 721  AADMSEKVKNG-IIPNFVTIPSTSNNPTSAESTTDEVSE-----QGEQPGEVIEQGEQL- 780

Query: 781  DEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFE 840
            DEG    E  +  + Q+  L R   +R R    RY   + V         S + EP + +
Sbjct: 781  DEGVEEVEHPTQGEEQHQPLRRS--ERPRVESRRYPSTEYVLI-------SDDREPESLK 840

Query: 841  EAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRY 900
            E +    K Q   AM+EE+ SL KN T+ LV  P  ++ ++ KW++K+K   G     RY
Sbjct: 841  EVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK-DGDCKLVRY 900

Query: 901  KARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEE 960
            KARLV KG+ QK+G+DF EIFSPVV+ +SIR ILS+A   D+ +EQ+DV TAFLHG+LEE
Sbjct: 901  KARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEE 960

Query: 961  VIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYW 1020
             IYM QP+G+EV GK+ MVC+L+KSLYGLKQ+PRQWY++FD+F+  Q + +   D CVY+
Sbjct: 961  EIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYF 1020

Query: 1021 KQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDRE 1080
            K+  +  +I LLLYVDDM++V KD   I +LK  LS  F+MKDLG  ++ILGM + R+R 
Sbjct: 1021 KRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERT 1080

Query: 1081 KGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNA 1140
               L +SQE Y+ ++LE++NM  +K VSTPLA H +LS   CP T +E+  M+ +PY +A
Sbjct: 1081 SRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSA 1140

Query: 1141 VGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDK 1200
            VGS+MY M+CTRPD+ +A+ ++SRF+ NPGKEHW+AVKW+LRYL+G+    LC+      
Sbjct: 1141 VGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG---GS 1200

Query: 1201 STLLEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAV 1260
              +L+G+TDAD A D+D R+S + ++F   G  +SW+  LQ  VALSTTE+EYI+  E  
Sbjct: 1201 DPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETG 1260

Query: 1261 KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKD 1320
            KE +WLKR + EL   +   +++CDSQSAI L+KN  +H R+KHIDV++H+IR ++  + 
Sbjct: 1261 KEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDES 1317

Query: 1321 VELVKVHTVENLSDMLTKALSAHRFK 1334
            ++++K+ T EN +DMLTK +  ++F+
Sbjct: 1321 LKVLKISTNENPADMLTKVVPRNKFE 1317

[Close]
BLAST of Cmc05g0128311 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 634.4 bits (1635), Expect = 2.9e-180
Identity = 444/1449 (30.64%), Postives = 744/1449 (51.35%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            M   +  +  F+G   +++W+ +IRA+L +  V K++D   +P+ + +S K+  +  A S
Sbjct: 1    MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVD-GLMPNEVDDSWKK-AERCAKS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120
            TI+ YLSD  L       T  ++ + L+++Y  KSL +++ ++++    K+    SL  +
Sbjct: 61   TIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSH 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK-YGRDSLTMSIVLDALK 180
               F +++ +L   G K+ + ++   LL +LP  Y  +  AI+    ++LT++ V + L 
Sbjct: 121  FHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLL 180

Query: 181  TRNLEIKKERKD--GELLMARGRSEKKSWKG---KERSFRSKS--KGKSR---KCFLCHK 240
             + ++IK +  D   +++ A   +   ++K    K R  + K   KG S+   KC  C +
Sbjct: 181  DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGR 240

Query: 241  EGHFKKNC-----PLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRD 300
            EGH KK+C      LN   + +  +      +  A            +   EV   S  D
Sbjct: 241  EGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIA------------FMVKEVNNTSVMD 300

Query: 301  IHDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRI 360
             +  +++DSG + H+       T+  +V     +        V   G    AT  G+VR+
Sbjct: 301  -NCGFVLDSGASDHLINDESLYTDSVEVVPPLKIA-------VAKQGEFIYATKRGIVRL 360

Query: 361  -------LTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLY 420
                   L +V +  +   NL+S+  L  +G +I+ +   + ++K  L+ +K +   G+ 
Sbjct: 361  RNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNS---GM- 420

Query: 421  VLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNVEL--P 480
            +     ++  A   + K  +   LWH+R  H+S+  L  + ++ +      + N+EL   
Sbjct: 421  LNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE 480

Query: 481  FCEHCIMGKSTRVKFGKGKHTT--KGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK 540
             CE C+ GK  R+ F + K  T  K  L  VHSD+ GP   V++    YF+  +D F+  
Sbjct: 481  ICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHY 540

Query: 541  VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHF 600
               Y +K K + F  F ++  + E     KV YL  DNG E+++N+  QFC  +GI+ H 
Sbjct: 541  CVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHL 600

Query: 601  TVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTAL--NL 660
            TV +TPQ NG++ER  RTI E+ R +++ A L   FWGEA  TA YLINR PS AL  + 
Sbjct: 601  TVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSS 660

Query: 661  KTPQEVWTGKAPSLEHLRVFGCTAYAHVKD--GKLNKRALKCMFIGYPQGVKGYKLWCIE 720
            KTP E+W  K P L+HLRVFG T Y H+K+  GK + ++ K +F+GY     G+KLW  +
Sbjct: 661  KTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFKLW--D 720

Query: 721  KGMNKCIISRDVTFNETEM---------PYCVKEQQKQQTGDHVVTEVRIASEVRP--SI 780
                K I++RDV  +ET M            +K+ ++ +  +      +I     P  S 
Sbjct: 721  AVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESK 780

Query: 781  DLDNQPPLVSEIEDTQQSEFDGIQSQQERIL----------IDEGAFIEESSSNNDL--- 840
            + DN    +  ++D+++SE     +   +I+           D   F+++S  +N     
Sbjct: 781  ECDN----IQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLN 840

Query: 841  -------------------------------------------QNYQLTRDRVQRERHAP 900
                                                          ++   R +R +  P
Sbjct: 841  ESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKP 900

Query: 901  -IRYGYADLVAYALTCAADSIEAE-PLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSL 960
             I Y   D     +   A +I  + P +F+E    D K  W++A+  EL +   N TW++
Sbjct: 901  QISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTI 960

Query: 961  VPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSI 1020
              +P N+ ++ S+W++ +K    GN   RYKARLVA+G+TQK  +D+ E F+PV R SS 
Sbjct: 961  TKRPENKNIVDSRWVFSVKYNELGN-PIRYKARLVARGFTQKYQIDYEETFAPVARISSF 1020

Query: 1021 RLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLK 1080
            R ILS+ + +++ + QMDV TAFL+G L+E IYM  P+G  +    D VC+L+K++YGLK
Sbjct: 1021 RFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLK 1080

Query: 1081 QSPRQWYIRFDTFILKQGFHRNSYDACVY-WKQSQKGTYIYLLLYVDDMILVSKDYAEIC 1140
            Q+ R W+  F+  + +  F  +S D C+Y   +      IY+LLYVDD+++ + D   + 
Sbjct: 1081 QAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMN 1140

Query: 1141 ELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSGSKAVST 1200
              K+ L  +F M DL E+K  +G+ ++   +K  + +SQ +YV K+L K+NM    AVST
Sbjct: 1141 NFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDK--IYLSQSAYVKKILSKFNMENCNAVST 1200

Query: 1201 PLAS--HFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMS 1260
            PL S  ++ L +S          E  N P  + +G +MY+M+CTRPDL  A++++SR+ S
Sbjct: 1201 PLPSKINYELLNSD---------EDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSS 1260

Query: 1261 NPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSDHIF 1320
                E W+ +K VLRYLKG+  + L + ++      + G+ D+D+A     R+S + ++F
Sbjct: 1261 KNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLF 1320

Query: 1321 RLYG-NVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPI-IHCD 1342
            +++  N++ W    Q  VA S+TE+EY++L EAV+EA+WLK ++  +  +   PI I+ D
Sbjct: 1321 KMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYED 1380

[Close]
BLAST of Cmc05g0128311 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 8.2e-143
Identity = 427/1470 (29.05%), Postives = 678/1470 (46.12%), Query Frame = 0 

Query: 16   DFSLWRKKIRAILVQHKVAKILD-----------EERLPD-NITESEKRDMDEMAYSTIL 75
            ++ +W +++ A+   +++A  LD            + +P  N   +  R  D++ YS IL
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSL--LNKIYIKEKF-----FGYKMDQSKS 135
              +S  V   V  ATT  ++W+ L  +Y   S   + ++    +F      G  MD  + 
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQLALLGKPMDHDEQ 149

Query: 136  LE---ENLDEFQKIVVD----------LNNIGEKMSDENQAVILLNSLPETYREVKAAIK 195
            +E   ENL +  K V+D          L  I E++ +    ++ LNS       + A + 
Sbjct: 150  VERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVV--PITANVV 209

Query: 196  YGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRK 255
              R++ T          RN   + + ++      R  S + S  G  RS   + K    +
Sbjct: 210  THRNTNT---------NRNQNNRGDNRNYNNNNNRSNSWQPSSSG-SRSDNRQPKPYLGR 269

Query: 256  CFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHR 315
            C +C  +GH  K CP     +++T++   T  +             T ++    L V+  
Sbjct: 270  CQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPF-------------TPWQPRANLAVNSP 329

Query: 316  DIHDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMV 375
               + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS  + T    +
Sbjct: 330  YNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSL 389

Query: 376  RILTNVRYVPKLKRNLISLGEL---DRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLY-- 435
              L  V YVP + +NLIS+  L   +R        +  +K     +  L+G  +  LY  
Sbjct: 390  D-LNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEW 449

Query: 436  -VLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPFCE 495
             +     VS  A+  S K T  S  WH RL H S   L + +S   L     + +L  C 
Sbjct: 450  PIASSQAVSMFASPCS-KATHSS--WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCS 509

Query: 496  HCIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYP 555
             C + KS +V F     T+   L+Y++SD+W  +  +S+   RY++  +D F+R  W+YP
Sbjct: 510  DCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYP 569

Query: 556  LKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYT 615
            LKQK +    F+ +K  VEN+   ++  L +DNG EFV      +    GI+   +  +T
Sbjct: 570  LKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHT 629

Query: 616  PQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVW 675
            P+ NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+  L L++P +  
Sbjct: 630  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 689

Query: 676  TGKAPSLEHLRVFGCTAYAHVKD---GKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKC 735
             G+ P+ E L+VFGC  Y  ++     KL  ++ +C F+GY      Y   C+     + 
Sbjct: 690  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAY--LCLHIPTGRL 749

Query: 736  IISRDVTFNETEMPYC-----VKEQQKQQT-------------------------GDHVV 795
              SR V F+E   P+      V   Q+Q++                         G H+ 
Sbjct: 750  YTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLD 809

Query: 796  TEVRIASEVRP----------------SIDLDNQPPLVSEIEDTQQSEFDGIQSQQERIL 855
            T  R  S   P                S    ++P   S       ++    Q+      
Sbjct: 810  TSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSP 869

Query: 856  IDEGAFIEESSSNNDLQNYQLTRDR----------------------------------- 915
            I         S N+  QN  L +                                     
Sbjct: 870  ILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPA 929

Query: 916  ---VQRERHAPIR-YGYA-----------DLVAYALTCAADSIEAEPLTFEEAIVSDSKK 975
               +Q    AP+  +  A              +YA + AA+S   EP T  +A+  D   
Sbjct: 930  PPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANS---EPRTAIQAMKDD--- 989

Query: 976  QWKDAMEEELFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKG 1035
            +W+ AM  E+ +   N TW LV P PP+  ++  +WI+  K  + G S  RYKARLVAKG
Sbjct: 990  RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKG 1049

Query: 1036 YTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPK 1095
            Y Q+ G+D+ E FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +YM+QP 
Sbjct: 1050 YNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPP 1109

Query: 1096 GYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTY 1155
            G+  K + D VCRL K++YGLKQ+PR WY+   T++L  GF  +  D  ++  Q  + + 
Sbjct: 1110 GFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGR-SI 1169

Query: 1156 IYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQ 1215
            IY+L+YVDD+++   D   +      LS  F +K+  +L   LG++ KR  +   L +SQ
Sbjct: 1170 IYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQ 1229

Query: 1216 ESYVIKLLEKYNMSGSKAVSTPLASHFRL---SSSQCPVTKQERIEMSNIPYCNAVGSIM 1275
              Y + LL + NM  +K V+TP+A+  +L   S ++ P   +         Y   VGS+ 
Sbjct: 1230 RRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE---------YRGIVGSLQ 1289

Query: 1276 YLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLE 1335
            YL   TRPDL YA++ +S++M  P  +HW A+K VLRYL G+    +   +    +  L 
Sbjct: 1290 YLAF-TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK--GNTLSLH 1349

Query: 1336 GFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1342
             ++DAD+A D D   S + +I  L  + +SW    Q  V  S+TE+EY S+     E  W
Sbjct: 1350 AYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQW 1409

[Close]
BLAST of Cmc05g0128311 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.1e-139
Identity = 415/1473 (28.17%), Postives = 685/1473 (46.50%), Query Frame = 0 

Query: 16   DFSLWRKKIRAILVQHKVAKILD-EERLPD-----------NITESEKRDMDEMAYSTIL 75
            ++ +W +++ A+   +++A  LD    +P            N   +  +  D++ YS +L
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENLDE 135
              +S  V   V  ATT  ++W+ L  +Y   S  +   ++ +   +    +K++++ +  
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG-TKTIDDYMQG 149

Query: 136  FQKIVVDLNNIGEKMSDENQAVILLNSLPETYREV--KAAIKYGRDSLT----------- 195
                   L  +G+ M  + Q   +L +LPE Y+ V  + A K    +LT           
Sbjct: 150  LVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHES 209

Query: 196  ----------MSIVLDALKTRNLEIKKERKDG----ELLMARGRSEKKSWKGKERSF--- 255
                      + I  +A+  RN        +G            +  K W+    +F   
Sbjct: 210  KILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN 269

Query: 256  RSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYE 315
             ++SK    KC +C  +GH  K C         +   +     NS +    +    T ++
Sbjct: 270  NNQSKPYLGKCQICGVQGHSAKRC---------SQLQHFLSSVNSQQPPSPF----TPWQ 329

Query: 316  SAEVLMVSHRDIHDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGS 375
                L +      + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS
Sbjct: 330  PRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGS 389

Query: 376  VQIATHDGMVRILTNVRYVPKLKRNLISLGEL-DRSGCTIK--SENGVMKVTKGSLVKLK 435
              ++T    +  L N+ YVP + +NLIS+  L + +G +++    +  +K     +  L+
Sbjct: 390  TSLSTKSRPLN-LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQ 449

Query: 436  GTLRHGLY---VLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGV 495
            G  +  LY   +     VS  A+  S K T  S  WH RL H +   L ++     L  V
Sbjct: 450  GKTKDELYEWPIASSQPVSLFAS-PSSKATHSS--WHARLGHPAPSILNSVISNYSL-SV 509

Query: 496  KNVELPF--CEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISII 555
             N    F  C  C++ KS +V F +    +   L+Y++SD+W  +  +S    RY++  +
Sbjct: 510  LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFV 569

Query: 556  DDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSE 615
            D F+R  W+YPLKQK +    F+ +K  +EN+   ++    +DNG EFV     ++    
Sbjct: 570  DHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQH 629

Query: 616  GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPST 675
            GI+   +  +TP+ NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+ 
Sbjct: 630  GISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTP 689

Query: 676  ALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVK---DGKLNKRALKCMFIGYPQGVKGYK 735
             L L++P +   G +P+ + LRVFGC  Y  ++     KL+ ++ +C+F+GY      Y 
Sbjct: 690  LLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAY- 749

Query: 736  LWCIEKGMNKCIISRDVTFNETEMPYC--------VKEQQKQQT---GDHVVTEVR---- 795
              C+    ++  ISR V F+E   P+         V+EQ+++ +     H     R    
Sbjct: 750  -LCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVL 809

Query: 796  -----------IASEVRPSIDLDNQPPLVSEIEDTQQSEF-----------DGIQSQQER 855
                             PS    N     S ++ +  S F           +G Q   + 
Sbjct: 810  PAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQP 869

Query: 856  ILIDEGAFIEESSSNNDLQN---YQLTRDR------------------------------ 915
                      +++S N+  N    QL +                                
Sbjct: 870  TQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSIL 929

Query: 916  ----------VQRERHAPIR------YGYADLV----AYALTCAADSIEAEPLTFEEAIV 975
                      V     AP+          A ++     Y+L  +  + E+EP T   AI 
Sbjct: 930  IHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSL-AAESEPRT---AIQ 989

Query: 976  SDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIKPGTGGNSKPRYKAR 1035
            +   ++W++AM  E+ +   N TW LVP PP+   ++  +WI+  K  + G S  RYKAR
Sbjct: 990  ALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG-SLNRYKAR 1049

Query: 1036 LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 1095
            LVAKGY Q+ G+D+ E FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +Y
Sbjct: 1050 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVY 1109

Query: 1096 MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 1155
            M+QP G+  K + + VC+L K+LYGLKQ+PR WY+    ++L  GF  +  D  ++  Q 
Sbjct: 1110 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1169

Query: 1156 QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1215
             K + +Y+L+YVDD+++   D   +      LS  F +KD  EL   LG++ KR      
Sbjct: 1170 GK-SIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG-- 1229

Query: 1216 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLS-SSQCPVTKQERIEMSNIPYCNAVG 1275
            L +SQ  Y++ LL + NM  +K V+TP+A   +LS  S   +T           Y   VG
Sbjct: 1230 LHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE-------YRGIVG 1289

Query: 1276 SIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKST 1335
            S+ YL   TRPD+ YA++ +S+FM  P +EH +A+K +LRYL G+ +  +   +    + 
Sbjct: 1290 SLQYLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK--GNTL 1349

Query: 1336 LLEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKE 1342
             L  ++DAD+A D D   S + +I  L  + +SW    Q  V  S+TE+EY S+     E
Sbjct: 1350 SLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSE 1409

[Close]
BLAST of Cmc05g0128311 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.7e-40
Identity = 272/1343 (20.25%), Postives = 513/1343 (38.20%), Query Frame = 0 

Query: 281  SHRDIHDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDG 340
            S+ ++ D  ++DSG +  +     +L +        ++        +   G++     +G
Sbjct: 446  SNDELPDHLLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNG 505

Query: 341  MVRILTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLE 400
              +      + P +  +L+SL EL     T       ++ + G++  L   ++HG +   
Sbjct: 506  -TKTSIKALHTPNIAYDLLSLSELANQNITACFTRNTLERSDGTV--LAPIVKHGDFYWL 565

Query: 401  GTTVSGSAAIASGKVTDMSM----------LWHKRLAHVSERGLQALSQQGLLGGVKNVE 460
                   + I+   + +++           L H+ L H + R +Q   ++  +  +K  +
Sbjct: 566  SKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESD 625

Query: 461  LPF-------CEHCIMGKSTRVKFGKGK----HTTKGILDYVHSDLWGPTKEVSMGGSRY 520
            + +       C  C++GKST+ +  KG       +     Y+H+D++GP   +      Y
Sbjct: 626  IEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSY 685

Query: 521  FISIIDDFSRKVWIYPL--KQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKF 580
            FIS  D+ +R  W+YPL  ++++     F      ++NQ   +V  ++ D G E+ N   
Sbjct: 686  FISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTL 745

Query: 581  NQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYL 640
            ++F  + GIT  +T T   + +G+AER NRT++   R LL  + LP   W  A + +  +
Sbjct: 746  HKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFST-I 805

Query: 641  INRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYA--HVKDGKLNKRALKCMFIGYPQ 700
            I  S  +  N K+ ++        +  +  FG       H  D K++ R +    +   +
Sbjct: 806  IRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSR 865

Query: 701  GVKGYKLW--CIEKGMN--KCIISRD------------VTF-----------------NE 760
               GY ++   ++K ++    +I +D            +TF                 NE
Sbjct: 866  NSYGYIIYLPSLKKTVDTTNYVILQDNQSKLDQFNYDTLTFDDDLNRLTAHNQSFIEQNE 925

Query: 761  TEMPYCVKEQQKQQTGDHVVTEVRI---------ASEVRPSIDLDNQP----PLVSEIED 820
            TE  Y     Q  ++     +E+ I         +S+    + LD++P      + E+ D
Sbjct: 926  TEQSY----DQNTESDHDYQSEIEINSDPLVNDFSSQSMNPLQLDHEPVQKVRALKEV-D 985

Query: 821  TQQSEFD----GIQSQQERILIDE----GAFIEESSS----------------------- 880
               SE++     ++S+   I+  E    G  IE  ++                       
Sbjct: 986  ADISEYNILPSPVRSRTPHIINKESTEMGGTIESDTTSPRHSSTFTARNQKRPGSPNDMI 1045

Query: 881  --------NNDLQNYQLTR------DRVQRERHAPIRY-----------------GYADL 940
                    N +L+N + TR        +QR     I+Y                     +
Sbjct: 1046 DLTSQDRVNYELENIKTTRLGGTEEPYIQRNSDTNIKYRTTNSTPSIDDRSPDSDSTTPI 1105

Query: 941  VAYALTCAAD---SIEAEPLTFEEA------IVSD--SKKQWKDAMEEEL---------- 1000
            ++     A D   SI+ +P  +  +      I+ D  SK    D++ ++L          
Sbjct: 1106 ISIETKAACDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTNKSP 1165

Query: 1001 --------------------------------------FSLHKNQTWSLVPK-------- 1060
                                                   SL  N+T   V +        
Sbjct: 1166 TDTSDVSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNM 1225

Query: 1061 ----PPNQK-----LIQSKWIYKIKP-------------GTGGNSKPRY----------- 1120
                PP  K     +   K +  IKP                   K RY           
Sbjct: 1226 RSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRYDEAITYNEDNKEKDRYIEAYHKEINQL 1285

Query: 1121 -------------------------------------KARLVAKGYTQKEGVDFHEIFSP 1180
                                                 KAR VA+G  Q       ++ S 
Sbjct: 1286 LRMNTWDTNKYYDRNDIDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSN 1345

Query: 1181 VVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 1240
             V H ++   LSIA+  D +I Q+D+++A+L+ +++E +Y+  P      G  D + RL 
Sbjct: 1346 TVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHL---GLNDKLLRLR 1405

Query: 1241 KSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY--WKQSQKGTYIYLLLYVDDMILV 1300
            KSLYGLKQS   WY    ++++      N  D      W    K + + + L+VDDMIL 
Sbjct: 1406 KSLYGLKQSGANWYETIKSYLI------NCCDMQEVRGWSCVFKNSQVTICLFVDDMILF 1465

Query: 1301 SKDYAEICELKKQLSNEFEMK--DLGELKR-----ILGMDVKRDREKGLLTISQESYVIK 1339
            SKD     ++   L  +++ K  +LGE        ILG+++K  R K  + +  E  + +
Sbjct: 1466 SKDLNANEKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSK-YMKLGMEKSLTE 1525

[Close]
BLAST of Cmc05g0128311 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 2675.6 bits (6934), Expect = 0.0e+00
Identity = 1339/1344 (99.63%), Postives = 1341/1344 (99.78%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDI DAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLS HIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

Query: 1321 DMLTKALSAHRFKYLLDELNVKSG 1345
            DMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1321 DMLTKALSAHRFKYLLDELNVKSG 1344

[Close]
BLAST of Cmc05g0128311 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 2553.1 bits (6616), Expect = 0.0e+00
Identity = 1287/1331 (96.69%), Postives = 1291/1331 (96.99%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDI DAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLS HIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1303

[Close]
BLAST of Cmc05g0128311 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 2504.2 bits (6489), Expect = 0.0e+00
Identity = 1269/1331 (95.34%), Postives = 1273/1331 (95.64%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDI DAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1283

[Close]
BLAST of Cmc05g0128311 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 2353.6 bits (6098), Expect = 0.0e+00
Identity = 1170/1174 (99.66%), Postives = 1172/1174 (99.83%), Query Frame = 0 

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDI DAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1070
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLS HIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1310
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1311 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1345
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]
BLAST of Cmc05g0128311 vs. ExPASy TrEMBL
Match: A0A5A7TP18 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001600 PE=4 SV=1)

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1071/1226 (87.36%), Postives = 1082/1226 (88.25%), Query Frame = 0 

Query: 111  MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIHDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMVSHRDI DAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 951  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 1010
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 1011 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1070
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1071 REKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1130
            +EKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1131 NAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1190
            NAVGSIMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1191 DKSTLLEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1250
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1251 AVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1310
            AVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

Query: 1311 KDVELVKVHTVENLSDMLTKALSAHR 1332
            KDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1201 KDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]
BLAST of Cmc05g0128311 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 302.8 bits (774), Expect = 1.4e-81
Identity = 182/494 (36.84%), Postives = 287/494 (58.10%), Query Frame = 0 

Query: 812  LTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKW 871
            L C A +   EP T+ EA        W  AM++E+ ++    TW +   PPN+K I  KW
Sbjct: 77   LVCIAKA--KEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKW 136

Query: 872  IYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFI 931
            +YKIK  + G  + RYKARLVAKGYTQ+EG+DF E FSPV + +S++LIL+I+  ++  +
Sbjct: 137  VYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 196

Query: 932  EQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDM----VCRLHKSLYGLKQSPRQWYIRF 991
             Q+D++ AFL+G+L+E IYM  P GY  +  + +    VC L KS+YGLKQ+ RQW+++F
Sbjct: 197  HQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKF 256

Query: 992  DTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFE 1051
               ++  GF ++  D   Y+ +     ++ +L+YVDD+I+ S + A + ELK QL + F+
Sbjct: 257  SVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 316

Query: 1052 MKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSS 1111
            ++DLG LK  LG+++ R      + I Q  Y + LL++  + G K  S P+      S+ 
Sbjct: 317  LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 376

Query: 1112 QCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWV 1171
                +  + ++     Y   +G +MYL I TR D+ +A++ +S+F   P   H +AV  +
Sbjct: 377  ----SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 436

Query: 1172 LRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSDHIFRLYGNVVSWKVNL 1231
            L Y+KG+    L YS   +    L+ F+DA + +  D RRS + +   L  +++SWK   
Sbjct: 437  LHYIKGTVGQGLFYSSQAEMQ--LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 496

Query: 1232 QPVVALSTTESEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNPSHH 1291
            Q VV+ S+ E+EY +L  A  E +WL +   EL L      ++ CD+ +AIH+A N   H
Sbjct: 497  QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 552

Query: 1292 ERSKHIDVKFHYIR 1301
            ER+KHI+   H +R
Sbjct: 557  ERTKHIESDCHSVR 552

[Close]
BLAST of Cmc05g0128311 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-25
Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = 0 

Query: 376 GVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQ 435
           GV+KV KG    LKG     LY+L+G+  +G + +A     D + LWH RLAH+S+RG++
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86

Query: 436 ALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWG 488
            L ++G L   K   L FCE CI GK+ RV F  G+HTTK  LDYVHSDLWG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]
BLAST of Cmc05g0128311 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 7.2e-25
Identity = 80/237 (33.76%), Postives = 124/237 (52.32%), Query Frame = 0 

Query: 1016 IYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQ 1075
            +YLLLYVDD++L       +  L  QLS+ F MKDLG +   LG+ +K     GL  +SQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIK-THPSGLF-LSQ 60

Query: 1076 ESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLM 1135
              Y  ++L    M   K +STPL    +L+SS       +  +  +I     VG++ YL 
Sbjct: 61   TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQYLT 120

Query: 1136 ICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFT 1195
            + TRPD+ YA++++ + M  P    +  +K VLRY+KG+    L   ++   +  ++ F 
Sbjct: 121  L-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFC 180

Query: 1196 DADYAADLDKRRSLSDHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1253
            D+D+A     RRS +     L  N++SW    QP V+ S+TE+EY +L     E  W
Sbjct: 181  DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Cmc05g0128311 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-17
Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 0 

Query: 810 YALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQS 869
           Y+LT    +I+ EP   +  I +     W  AM+EEL +L +N+TW LVP P NQ ++  
Sbjct: 16  YSLTITT-TIKKEP---KSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGC 75

Query: 870 KWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDM 929
           KW++K K  + G +  R KARLVAKG+ Q+EG+ F E +SPVVR ++IR IL++A   ++
Sbjct: 76  KWVFKTKLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130

[Close]
BLAST of Cmc05g0128311 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.4e-17
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 586 NRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHL 645
           NRTI+E+ R +L    LP  F  +AA TA ++IN+ PSTA+N   P EVW    P+  +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 646 RVFGCTAYAHVKDGKLNKRALK 668
           R FGC AY H  +GKL  RA K
Sbjct: 62  RRFGCVAYIHCDEGKLKPRAKK 83

The following BLAST results are available for this feature:
BLAST of Cmc05g0128311 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050719.10.0e+0099.63putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0047995.10.0e+0096.69retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... [more]
TYK25306.10.0e+0095.34putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYK13826.10.0e+0099.66putative polyprotein [Cucumis melo var. makuwa][more]
KAA0043826.10.0e+0087.36putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
BLAST of Cmc05g0128311 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109784.9e-29741.83Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.9e-18030.64Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT948.2e-14329.05Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.1e-13928.17Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q124917.7e-4020.25Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Cmc05g0128311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UB250.0e+0099.63Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A5A7U2U70.0e+0096.69Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... [more]
A0A5D3DNU10.0e+0095.34Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A5D3CTV20.0e+0099.66Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488... [more]
A0A5A7TP180.0e+0087.36Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
BLAST of Cmc05g0128311 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.11.4e-8136.84cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00300.11.9e-2550.00Gag-Pol-related retrotransposon family protein [more]
ATMG00810.17.2e-2533.76DNA/RNA polymerases superfamily protein [more]
ATMG00820.11.9e-1743.33Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00710.19.4e-1748.78Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availableGENE3D4.10.60.10coord: 196..251
e-value: 2.1E-6
score: 29.5
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 54..179
e-value: 1.0E-30
score: 106.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 2..1217
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1192..1329
e-value: 1.36829E-64
score: 213.099
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 223..239
e-value: 0.004
score: 26.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 222..238
score: 9.553822
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 395..462
e-value: 2.3E-16
score: 59.4
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 481..576
e-value: 1.5E-10
score: 41.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 471..639
score: 24.214426
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 852..1098
e-value: 8.2E-72
score: 241.7
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 470..650
e-value: 4.9E-45
score: 155.2
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 479..648
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 851..1297
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 208..243

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc05g0128311.1Cmc05g0128311.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding