Cmc04g0116681 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTTAACCTATGACTCTATAAATTAACAGCCACTTTGTTCCATTTGTCCCTCACTTGTTCCCTTTTTTTTTTTTTAGCTTTTCCTTTTCTTCTTCTTCTACTACTACTAGAAGTGCTTCTTCTGTTGCAAAAATCCAGATTGTTTTTGTTTACTTCTCTCTCTGCCCAACAAACCCTCTTAAAAAGGTGATCTTTTTTGAAAAGATAAAGAAAAATCAACACATACCCACTTTCTCTTTCCTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATGTATGTATAGTTTATATATTGTTAATTTTTTTGGGTCTTTTTGTTTTGTTCTTAAGGTTCTCTTCTTGCTTCCCTTTCACCAAGAAAGGTAGACATACCCTTATGTTGTGGGGTACTTCCTTTGTTTTGTTCCTTCTTTTTTGTGTAAGTTTTTGTTTTTGTTCTTCTGAATTCCAAGTTTCTTCTTCTTCTTCTTCTTCTTCTCTTGTATATTTGTATTGGATTTTTCAATTTAATGTCCTTTTCCCCCTTAAAACAATTTACTTCCTCTGTTTTTTGTGCAAATTACAGAGGATTATTTTACAAGGAAACTTAATTCGAAGTTCAGAATTTTTAAGTTTCTTATGGTCTTATTAATGTGGTTGAATATAGCTTTAATTATCCTTTTCTTTCGTATTTGGGCAACCGAAAGAACAACCCATTTCTTTTTTTTTTTCTTTTCACAATGAGTGTACATTTTGTCATCAATTTATCCTTATTCCGTCTTTTATTTTTTTTTTCACTAAAAAATCTTTTATTTAAGTATTTTCTAATAAGAAAATCCCCTGTTTCAAAGCTGTTTTTGCCTCCTCTTTTTCCCCATTTGTTTCTGTCTCTTTCTCTTCTAACTCTCATTATTACATATGGCTAAGACCAAAGCTTCCTCTTCTTCTTCTTCTTCTTCTTCATTACTGTTGGATTTATCAATCTCTATAAATTAAACTCTCACTATTTTTTTTCAATTCCTAATACTAAAACCCATCTCAACATTTCCATCTCGTGTGCTTCTAATTCCTCTTCTTCTCTGTTTTTTCTCCTATTTTTCCTTTTTCTAATTAAATTCTTTGTCTTCTTTTACAGGGTTTTTGTTTTTGGAATTTGGTTGATGTAATATCATCATATATTTATCAACCAAATTGTGATCAATCAATAATCAAATAAGCAAGAGGAAGGAATGGAGAGGCTAAACTCAGAGTTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGATTGAGGAAGAAGGCCCAACTTTTGAACCAAGAAAATCAAGCTCTTCTTTCAGAACTGAAGCAGAAATTATCGAAAGGAAATTCAAAAGCCAATGCTTCAAAATCAATTCCTGATCTTAATCTTTCCTCCGCAAATCCTTCTAATTCTTCCAATTGAAATCATACAATATCAATGGAAGAAGAAGAAGAAGAAGAACATGATGATGATGATGTTGATGATGATATCAAGACCCCACTTAAAGTTTAATCTTATTTTTAATTTTTTTTTTTTATGTTTTTCATTTTTTGTGAATTACCATAGCCAACAGTAGCAAGTAGTTTGGGTTTTCAGTTATATAGGACAGCATGTAGCTTTAGCATCTTTTTATTTTTATTTTTTTTTAAATTTCTTAATATCTTTTTTTGGGGGGGTTAGGATATGGATTTTCTGTACTTCAAAATGATGTATCAGGCTATCTAATGGAAAAACCAATTTCACATTATAAGTTCTCTTTCTCATATC CTCTCTCTTAACCTATGACTCTATAAATTAACAGCCACTTTGTTCCATTTGTCCCTCACTTGTTCCCTTTTTTTTTTTTTAGCTTTTCCTTTTCTTCTTCTTCTACTACTACTAGAAGTGCTTCTTCTGTTGCAAAAATCCAGATTGTTTTTGTTTACTTCTCTCTCTGCCCAACAAACCCTCTTAAAAAGGGTTTTTGTTTTTGGAATTTGGTTGATGTAATATCATCATATATTTATCAACCAAATTGTGATCAATCAATAATCAAATAAGCAAGAGGAAGGAATGGAGAGGCTAAACTCAGAGTTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGATTGAGGAAGAAGGCCCAACTTTTGAACCAAGAAAATCAAGCTCTTCTTTCAGAACTGAAGCAGAAATTATCGAAAGGAAATTCAAAAGCCAATGCTTCAAAATCAATTCCTGATCTTAATCTTTCCTCCGCAAATCCTTCTAATTCTTCCAATTGAAATCATACAATATCAATGGAAGAAGAAGAAGAAGAAGAACATGATGATGATGATGTTGATGATGATATCAAGACCCCACTTAAAGTTTAATCTTATTTTTAATTTTTTTTTTTTATGTTTTTCATTTTTTGTGAATTACCATAGCCAACAGTAGCAAGTAGTTTGGGTTTTCAGTTATATAGGACAGCATGTAGCTTTAGCATCTTTTTATTTTTATTTTTTTTTAAATTTCTTAATATCTTTTTTTGGGGGGGTTAGGATATGGATTTTCTGTACTTCAAAATGATGTATCAGGCTATCTAATGGAAAAACCAATTTCACATTATAAGTTCTCTTTCTCATATC ATGGAGAGGCTAAACTCAGAGTTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGATTGAGGAAGAAGGCCCAACTTTTGAACCAAGAAAATCAAGCTCTTCTTTCAGAACTGAAGCAGAAATTATCGAAAGGAAATTCAAAAGCCAATGCTTCAAAATCAATTCCTGATCTTAATCTTTCCTCCGCAAATCCTTCTAATTCTTCCAATTGA MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSNSSN Homology
BLAST of Cmc04g0116681 vs. NCBI nr
Match: XP_008442826.1 (PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo] >XP_008442827.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo] >XP_011652008.1 protein LITTLE ZIPPER 4 [Cucumis sativus] >XP_038905261.1 protein LITTLE ZIPPER 4 [Benincasa hispida] >XP_038905262.1 protein LITTLE ZIPPER 4 [Benincasa hispida] >XP_038905263.1 protein LITTLE ZIPPER 4 [Benincasa hispida] >KGN59119.1 hypothetical protein Csa_001986 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 3.6e-26 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc04g0116681 vs. NCBI nr
Match: XP_022935644.1 (protein LITTLE ZIPPER 4 [Cucurbita moschata] >XP_022983169.1 protein LITTLE ZIPPER 4 [Cucurbita maxima] >XP_023526116.1 protein LITTLE ZIPPER 4 [Cucurbita pepo subsp. pepo] >KAG7017444.1 Protein LITTLE ZIPPER 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc04g0116681 vs. NCBI nr
Match: XP_022144704.1 (protein LITTLE ZIPPER 4 [Momordica charantia]) HSP 1 Score: 111.3 bits (277), Expect = 3.5e-21 Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of Cmc04g0116681 vs. NCBI nr
Match: XP_021639017.1 (protein LITTLE ZIPPER 4 isoform X2 [Hevea brasiliensis] >XP_021639018.1 protein LITTLE ZIPPER 4 isoform X2 [Hevea brasiliensis] >XP_021639020.1 protein LITTLE ZIPPER 4 isoform X2 [Hevea brasiliensis]) HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Cmc04g0116681 vs. NCBI nr
Match: XP_007027705.2 (PREDICTED: protein LITTLE ZIPPER 4 isoform X3 [Theobroma cacao] >XP_017976700.1 PREDICTED: protein LITTLE ZIPPER 4 isoform X3 [Theobroma cacao] >XP_017976701.1 PREDICTED: protein LITTLE ZIPPER 4 isoform X3 [Theobroma cacao]) HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Cmc04g0116681 vs. ExPASy Swiss-Prot
Match: Q56WL5 (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.2e-13 Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of Cmc04g0116681 vs. ExPASy Swiss-Prot
Match: Q9LXI8 (Protein LITTLE ZIPPER 3 OS=Arabidopsis thaliana OX=3702 GN=ZPR3 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.8e-12 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Cmc04g0116681 vs. ExPASy TrEMBL
Match: A0A1S3B7E3 (protein LITTLE ZIPPER 4 OS=Cucumis melo OX=3656 GN=LOC103486597 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc04g0116681 vs. ExPASy TrEMBL
Match: A0A0A0LE03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776310 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc04g0116681 vs. ExPASy TrEMBL
Match: A0A6J1J6J7 (protein LITTLE ZIPPER 4 OS=Cucurbita maxima OX=3661 GN=LOC111481803 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc04g0116681 vs. ExPASy TrEMBL
Match: A0A6J1F606 (protein LITTLE ZIPPER 4 OS=Cucurbita moschata OX=3662 GN=LOC111442436 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc04g0116681 vs. ExPASy TrEMBL
Match: A0A6J1CT31 (protein LITTLE ZIPPER 4 OS=Momordica charantia OX=3673 GN=LOC111014328 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-21 Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of Cmc04g0116681 vs. TAIR 10
Match: AT3G52770.1 (protein binding ) HSP 1 Score: 72.8 bits (177), Expect = 1.3e-13 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Cmc04g0116681 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 42.7 bits (99), Expect = 1.4e-04 Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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