Cmc04g0111121 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0111121
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr04: 30365427 .. 30366254 (-)
RNA-Seq Expression	Cmc04g0111121
Synteny	Cmc04g0111121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGTCACATTTAGCTCTACCATCACTCAACTTTGTTTTACTTCTAGTCCTCATGACACTATGCTCTTTACTCGCCACATACCCCCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGACGCTCGGACGGGTATTTATTGTCTCAAGCTAAATATGTCTCTGATCTTTTAGCTAGCTCAGGAATCACTGACTCTAACACAGCTTCAACGCCGTTAGATCTCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGACATTGCATATGTTGTTCACATTGTTAGCCAACTAATGGCTGCTCCTCGAACCATTCATTTTACTGTTGTACTACGTATCCTTCGCTATATCAAGGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCCCTCTCATATTATCTGGCTATTCTCATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAAGATACTGCTTCTACTTATGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCATGCTCTTGCTGATACTACTGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGTAG

mRNA sequence

ATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGTCACATTTAGCTCTACCATCACTCAACTTTGTTTTACTTCTAGTCCTCATGACACTATGCTCTTTACTCGCCACATACCCCCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGACGCTCGGACGGGTATTTATTGTCTCAAGCTAAATATGTCTCTGATCTTTTAGCTAGCTCAGGAATCACTGACTCTAACACAGCTTCAACGCCGTTAGATCTCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGACATTGCATATGTTGTTCACATTGTTAGCCAACTAATGGCTGCTCCTCGAACCATTCATTTTACTGTTGTACTACGTATCCTTCGCTATATCAAGGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCCCTCTCATATTATCTGGCTATTCTCATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAAGATACTGCTTCTACTTATGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCATGCTCTTGCTGATACTACTGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGTAG

Coding sequence (CDS)

ATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGTCACATTTAGCTCTACCATCACTCAACTTTGTTTTACTTCTAGTCCTCATGACACTATGCTCTTTACTCGCCACATACCCCCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGACGCTCGGACGGGTATTTATTGTCTCAAGCTAAATATGTCTCTGATCTTTTAGCTAGCTCAGGAATCACTGACTCTAACACAGCTTCAACGCCGTTAGATCTCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGACATTGCATATGTTGTTCACATTGTTAGCCAACTAATGGCTGCTCCTCGAACCATTCATTTTACTGTTGTACTACGTATCCTTCGCTATATCAAGGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCCCTCTCATATTATCTGGCTATTCTCATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAAGATACTGCTTCTACTTATGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCATGCTCTTGCTGATACTACTGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGTAG

Protein sequence

MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

Homology

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BLAST of Cmc04g0111121 vs. NCBI nr
Match: KAA0053709.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK17749.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 493.0 bits (1268), Expect = 1.6e-135
Identity = 255/269 (94.80%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 7   HELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQ 66
           HELGLSHLALPSLN VLLLVLMTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQ
Sbjct: 45  HELGLSHLALPSLNLVLLLVLMTLRSLLATYPLLLLYVDDMIITGNDPQAIFDLQHYLGQ 104

Query: 67  HFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTP 126
           HFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGI DSNTASTPLDLNVHLTP
Sbjct: 105 HFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTP 164

Query: 127 YDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKG 186
           YDGVPLEDVSLYRQLVGSLIYLTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKG
Sbjct: 165 YDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKG 224

Query: 187 TLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSS 246
           TLGHGLQFSSQS L+LSGYS ADWAGDPTDRRSTTRYCFYL D LISWRSKKQSVVSRSS
Sbjct: 225 TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTRYCFYLRDYLISWRSKKQSVVSRSS 284

Query: 247 TESEYHALADTTAELLWLRWLLADMGVPQ 276
           TESEYHALADTTAELLWL WLLADMGVPQ
Sbjct: 285 TESEYHALADTTAELLWLCWLLADMGVPQ 313

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BLAST of Cmc04g0111121 vs. NCBI nr
Match: XP_016899671.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 460.7 bits (1184), Expect = 8.9e-126
Identity = 235/248 (94.76%), Postives = 236/248 (95.16%), Query Frame = 0


Query: 28  MTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRR 87
           MTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRR
Sbjct: 1   MTLRSLLATYPLLLLYVDDMIITGNDPQAIFDLQHYLGQHFEMKDLGSLNYFLGLEVSRR 60

Query: 88  SDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIY 147
           SDGYLLSQAKY SDLLA SGI DSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIY
Sbjct: 61  SDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIY 120

Query: 148 LTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSH 207
           LTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS 
Sbjct: 121 LTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSD 180

Query: 208 ADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWL 267
           ADWAGDPTDRRSTTRYCFYL D LISWRSKKQSVVSRSSTESEYHALADTTAELLWL WL
Sbjct: 181 ADWAGDPTDRRSTTRYCFYLRDYLISWRSKKQSVVSRSSTESEYHALADTTAELLWLCWL 240

Query: 268 LADMGVPQ 276
           LADMGVPQ
Sbjct: 241 LADMGVPQ 248

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BLAST of Cmc04g0111121 vs. NCBI nr
Match: KAA0064060.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 441.4 bits (1134), Expect = 5.6e-120
Identity = 224/237 (94.51%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 39   LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 98
            LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY
Sbjct: 905  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 964

Query: 99   VSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYV 158
             SDLLA SGITDSNTASTPLD NVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAY 
Sbjct: 965  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTRPDIAYA 1024

Query: 159  VHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRR 218
            VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS ADWAGDPTDRR
Sbjct: 1025 VHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRR 1084

Query: 219  STTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ 276
            STT YCFYL DSLISWRSKKQSVVSRSSTESEY ALADTTAELLWLRWLLADMGVPQ
Sbjct: 1085 STTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQ 1141

[Close]

BLAST of Cmc04g0111121 vs. NCBI nr
Match: KAA0052097.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 441.0 bits (1133), Expect = 7.3e-120
Identity = 223/237 (94.09%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 39   LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 98
            LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY
Sbjct: 866  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 925

Query: 99   VSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYV 158
             SDLLA SGITDSNTASTPLD NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVT PDIAYV
Sbjct: 926  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYV 985

Query: 159  VHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRR 218
            VHIVSQ MAAPRTIHFTVVLRILRY+KGTLGHGLQFSSQS L+LSGYS+ADWAGDPTDR 
Sbjct: 986  VHIVSQFMAAPRTIHFTVVLRILRYVKGTLGHGLQFSSQSSLVLSGYSNADWAGDPTDRH 1045

Query: 219  STTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ 276
            STT YCFYL DSLISWRSKKQSVVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Sbjct: 1046 STTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQ 1102

[Close]

BLAST of Cmc04g0111121 vs. NCBI nr
Match: TYK00711.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 9.6e-120
Identity = 233/275 (84.73%), Postives = 238/275 (86.55%), Query Frame = 0


Query: 1   MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDL 60
           M SNRLHELGL  LALPSLN  LL VLM L SLL T+                P+AISDL
Sbjct: 1   MVSNRLHELGLPRLALPSLNLALLPVLMILHSLLVTH----------------PRAISDL 60

Query: 61  QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDL 120
           QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGITDSNTASTPLD 
Sbjct: 61  QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDP 120

Query: 121 NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRI 180
           NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVT PDIAY VHIVSQ MAAPRTIHFTVVLRI
Sbjct: 121 NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRI 180

Query: 181 LRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQS 240
           LRY+KGTLGHGLQFSSQS L+LSGYS+ADWAGDPTDR STT YCFYL DSLISWRSKKQS
Sbjct: 181 LRYVKGTLGHGLQFSSQSSLVLSGYSNADWAGDPTDRHSTTGYCFYLGDSLISWRSKKQS 240

Query: 241 VVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ 276
           VVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Sbjct: 241 VVSRSSTESEYRALADATAELLWLRWLLADMGVPQ 259

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BLAST of Cmc04g0111121 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.2e-49
Identity = 105/234 (44.87%), Postives = 143/234 (61.11%), Query Frame = 0


Query: 40   LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYV 99
            +L+YVDD++ITGNDP  + +    L Q F +KD   L+YFLG+E  R   G  LSQ +Y+
Sbjct: 1147 MLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYI 1206

Query: 100  SDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVV 159
             DLLA + +  +   +TP+  +  L+ Y G  L D + YR +VGSL YL  T PDI+Y V
Sbjct: 1207 LDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAV 1266

Query: 160  HIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRS 219
            + +SQ M  P   H   + RILRY+ GT  HG+     + L L  YS ADWAGD  D  S
Sbjct: 1267 NRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVS 1326

Query: 220  TTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGV 274
            T  Y  YL    ISW SKKQ  V RSSTE+EY ++A+T++E+ W+  LL ++G+
Sbjct: 1327 TNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI 1380

[Close]

BLAST of Cmc04g0111121 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.3e-47
Identity = 101/224 (45.09%), Postives = 141/224 (62.95%), Query Frame = 0


Query: 40  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYV 99
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 100 SDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVV 159
             +L ++G+ D    STPL L ++ +        D S +R +VG+L YLT+T PDI+Y V
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 160 HIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRS 219
           +IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  +  +DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 220 TTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLW 264
           TT +C +L  ++ISW +K+Q  VSRSSTE+EY ALA T AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc04g0111121 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.6e-47
Identity = 102/234 (43.59%), Postives = 141/234 (60.26%), Query Frame = 0


Query: 40   LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYV 99
            +L+YVDD++ITGND   +      L Q F +K+   L+YFLG+E  R   G  LSQ +Y 
Sbjct: 1130 MLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYT 1189

Query: 100  SDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVV 159
             DLLA + +  +   +TP+  +  LT + G  L D + YR +VGSL YL  T PD++Y V
Sbjct: 1190 LDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAV 1249

Query: 160  HIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRS 219
            + +SQ M  P   H+  + R+LRY+ GT  HG+     + L L  YS ADWAGD  D  S
Sbjct: 1250 NRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVS 1309

Query: 220  TTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGV 274
            T  Y  YL    ISW SKKQ  V RSSTE+EY ++A+T++EL W+  LL ++G+
Sbjct: 1310 TNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGI 1363

[Close]

BLAST of Cmc04g0111121 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.9e-36
Identity = 98/246 (39.84%), Postives = 140/246 (56.91%), Query Frame = 0


Query: 39   LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQA 98
            +LLLYVDDM+I G D   I+ L+  L + F+MKDLG     LG+++   R S    LSQ 
Sbjct: 1004 ILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQE 1063

Query: 99   KYVSDLLASSGITDSNTASTP----LDLNVHLTPYDGVPLEDVSL--YRQLVGSLIYLTV 158
            KY+  +L    + ++   STP    L L+  + P       +++   Y   VGSL+Y  V
Sbjct: 1064 KYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMV 1123

Query: 159  -THPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHAD 218
             T PDIA+ V +VS+ +  P   H+  V  ILRY++GT G  L F    P IL GY+ AD
Sbjct: 1124 CTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDP-ILKGYTDAD 1183

Query: 219  WAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLA 276
             AGD  +R+S+T Y F      ISW+SK Q  V+ S+TE+EY A  +T  E++WL+  L 
Sbjct: 1184 MAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQ 1243

[Close]

BLAST of Cmc04g0111121 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 143.7 bits (361), Expect = 3.2e-33
Identity = 87/241 (36.10%), Postives = 138/241 (57.26%), Query Frame = 0


Query: 40   LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYV 99
            +LLYVDD++I   D   +++ + YL + F M DL  + +F+G+ +  + D   LSQ+ YV
Sbjct: 1084 VLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYV 1143

Query: 100  SDLLASSGITDSNTASTPL--DLNVHLTPYDGVPLEDVSL-YRQLVGSLIYLTV-THPDI 159
              +L+   + + N  STPL   +N  L   D    ED +   R L+G L+Y+ + T PD+
Sbjct: 1144 KKILSKFNMENCNAVSTPLPSKINYELLNSD----EDCNTPCRSLIGCLMYIMLCTRPDL 1203

Query: 160  AYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPL--ILSGYSHADWAGD 219
               V+I+S+  +   +  +  + R+LRY+KGT+   L F         + GY  +DWAG 
Sbjct: 1204 TTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGS 1263

Query: 220  PTDRRSTTRYCFYLCD-SLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMG 274
              DR+STT Y F + D +LI W +K+Q+ V+ SSTE+EY AL +   E LWL++LL  + 
Sbjct: 1264 EIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSIN 1320

[Close]

BLAST of Cmc04g0111121 vs. ExPASy TrEMBL
Match: A0A5A7UJQ7 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00220 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.9e-136
Identity = 255/269 (94.80%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 7   HELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQ 66
           HELGLSHLALPSLN VLLLVLMTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQ
Sbjct: 45  HELGLSHLALPSLNLVLLLVLMTLRSLLATYPLLLLYVDDMIITGNDPQAIFDLQHYLGQ 104

Query: 67  HFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTP 126
           HFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGI DSNTASTPLDLNVHLTP
Sbjct: 105 HFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTP 164

Query: 127 YDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKG 186
           YDGVPLEDVSLYRQLVGSLIYLTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKG
Sbjct: 165 YDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKG 224

Query: 187 TLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSS 246
           TLGHGLQFSSQS L+LSGYS ADWAGDPTDRRSTTRYCFYL D LISWRSKKQSVVSRSS
Sbjct: 225 TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTRYCFYLRDYLISWRSKKQSVVSRSS 284

Query: 247 TESEYHALADTTAELLWLRWLLADMGVPQ 276
           TESEYHALADTTAELLWL WLLADMGVPQ
Sbjct: 285 TESEYHALADTTAELLWLCWLLADMGVPQ 313

[Close]

BLAST of Cmc04g0111121 vs. ExPASy TrEMBL
Match: A0A1S4DUL1 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107990614 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.3e-126
Identity = 235/248 (94.76%), Postives = 236/248 (95.16%), Query Frame = 0


Query: 28  MTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRR 87
           MTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRR
Sbjct: 1   MTLRSLLATYPLLLLYVDDMIITGNDPQAIFDLQHYLGQHFEMKDLGSLNYFLGLEVSRR 60

Query: 88  SDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIY 147
           SDGYLLSQAKY SDLLA SGI DSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIY
Sbjct: 61  SDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIY 120

Query: 148 LTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSH 207
           LTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS 
Sbjct: 121 LTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSD 180

Query: 208 ADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWL 267
           ADWAGDPTDRRSTTRYCFYL D LISWRSKKQSVVSRSSTESEYHALADTTAELLWL WL
Sbjct: 181 ADWAGDPTDRRSTTRYCFYLRDYLISWRSKKQSVVSRSSTESEYHALADTTAELLWLCWL 240

Query: 268 LADMGVPQ 276
           LADMGVPQ
Sbjct: 241 LADMGVPQ 248

[Close]

BLAST of Cmc04g0111121 vs. ExPASy TrEMBL
Match: A0A5A7V9Z8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold99G00670 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.7e-120
Identity = 224/237 (94.51%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 39   LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 98
            LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY
Sbjct: 905  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 964

Query: 99   VSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYV 158
             SDLLA SGITDSNTASTPLD NVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAY 
Sbjct: 965  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTRPDIAYA 1024

Query: 159  VHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRR 218
            VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS ADWAGDPTDRR
Sbjct: 1025 VHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRR 1084

Query: 219  STTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ 276
            STT YCFYL DSLISWRSKKQSVVSRSSTESEY ALADTTAELLWLRWLLADMGVPQ
Sbjct: 1085 STTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQ 1141

[Close]

BLAST of Cmc04g0111121 vs. ExPASy TrEMBL
Match: A0A5A7UCC7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00790 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.5e-120
Identity = 223/237 (94.09%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 39   LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 98
            LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY
Sbjct: 866  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 925

Query: 99   VSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYV 158
             SDLLA SGITDSNTASTPLD NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVT PDIAYV
Sbjct: 926  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYV 985

Query: 159  VHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRR 218
            VHIVSQ MAAPRTIHFTVVLRILRY+KGTLGHGLQFSSQS L+LSGYS+ADWAGDPTDR 
Sbjct: 986  VHIVSQFMAAPRTIHFTVVLRILRYVKGTLGHGLQFSSQSSLVLSGYSNADWAGDPTDRH 1045

Query: 219  STTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ 276
            STT YCFYL DSLISWRSKKQSVVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Sbjct: 1046 STTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQ 1102

[Close]

BLAST of Cmc04g0111121 vs. ExPASy TrEMBL
Match: A0A5D3BLM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00650 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.6e-120
Identity = 233/275 (84.73%), Postives = 238/275 (86.55%), Query Frame = 0


Query: 1   MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDL 60
           M SNRLHELGL  LALPSLN  LL VLM L SLL T+                P+AISDL
Sbjct: 1   MVSNRLHELGLPRLALPSLNLALLPVLMILHSLLVTH----------------PRAISDL 60

Query: 61  QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDL 120
           QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGITDSNTASTPLD 
Sbjct: 61  QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDP 120

Query: 121 NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRI 180
           NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVT PDIAY VHIVSQ MAAPRTIHFTVVLRI
Sbjct: 121 NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRI 180

Query: 181 LRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQS 240
           LRY+KGTLGHGLQFSSQS L+LSGYS+ADWAGDPTDR STT YCFYL DSLISWRSKKQS
Sbjct: 181 LRYVKGTLGHGLQFSSQSSLVLSGYSNADWAGDPTDRHSTTGYCFYLGDSLISWRSKKQS 240

Query: 241 VVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ 276
           VVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Sbjct: 241 VVSRSSTESEYRALADATAELLWLRWLLADMGVPQ 259

[Close]

BLAST of Cmc04g0111121 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-50
Identity = 102/235 (43.40%), Postives = 149/235 (63.40%), Query Frame = 0


Query: 40  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYV 99
           +L+YVDD+II  N+  A+ +L+  L   F+++DLG L YFLGLE++R + G  + Q KY 
Sbjct: 280 VLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYA 339

Query: 100 SDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVV 159
            DLL  +G+     +S P+D +V  + + G    D   YR+L+G L+YL +T  DI++ V
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAV 399

Query: 160 HIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRS 219
           + +SQ   APR  H   V++IL YIKGT+G GL +SSQ+ + L  +S A +      RRS
Sbjct: 400 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRS 459

Query: 220 TTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVP 275
           T  YC +L  SLISW+SKKQ VVS+SS E+EY AL+  T E++WL     ++ +P
Sbjct: 460 TNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514

[Close]

BLAST of Cmc04g0111121 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-48
Identity = 101/224 (45.09%), Postives = 141/224 (62.95%), Query Frame = 0


Query: 40  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYV 99
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 100 SDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVV 159
             +L ++G+ D    STPL L ++ +        D S +R +VG+L YLT+T PDI+Y V
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 160 HIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRS 219
           +IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  +  +DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 220 TTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLW 264
           TT +C +L  ++ISW +K+Q  VSRSSTE+EY ALA T AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc04g0111121 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-14
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 146 IYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGY 205
           +YLT+T PD+ + V+ +SQ  +A RT     V ++L Y+KGT+G GL +S+ S L L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 206 SHADWAGDPTDRRSTTRYC 225
           + +DWA  P  RRS T +C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc04g0111121 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053709.1	1.6e-135	94.80	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK17749.1 putative m...	[more]
XP_016899671.1	8.9e-126	94.76	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0064060.1	5.6e-120	94.51	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0052097.1	7.3e-120	94.09	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK00711.1	9.6e-120	84.73	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0111121 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	9.2e-49	44.87	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	2.3e-47	45.09	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZT94	6.6e-47	43.59	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	8.9e-36	39.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.2e-33	36.10	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc04g0111121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJQ7	7.9e-136	94.80	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4DUL1	4.3e-126	94.76	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7V9Z8	2.7e-120	94.51	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UCC7	3.5e-120	94.09	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BLM4	4.6e-120	84.73	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cmc04g0111121 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.7e-50	43.40	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.6e-48	45.09	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	7.5e-14	43.04	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 40..118 e-value: 1.4E-18 score: 67.4
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 48..267
None	No IPR available	PANTHER	PTHR11439:SF268	ATP-DEPENDENT DNA HELICASE	coord: 48..267
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 204..275 e-value: 4.29851E-40 score: 134.133
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 39..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0111121.1	Cmc04g0111121.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding