Cmc04g0108141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0108141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 27093983 .. 27096181 (+)
RNA-Seq Expression	Cmc04g0108141
Synteny	Cmc04g0108141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCAAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAAGATCAACGATCTATTTGACCAGTTACAGGGAGCCACAGTATTCTCTAAAATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAAACAGCGTTTCGTTCCAGATATGGGCACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCCTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTGGCAGGTTATTATCGACGGTTTGTGGAGAATTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCTAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGTAGTTTTGTGATCTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAAATATTGACGGATCATAAAAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGTAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCGGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTCGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGCCGTCAGACAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCATAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAAGATCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACTCTGAGGGGTTTCACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAGTCAGCGCACTTCATTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTATGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCCTATAATAACAGCTATCAGGCTACCATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTAG

mRNA sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCAAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAAGATCAACGATCTATTTGACCAGTTACAGGGAGCCACAGTATTCTCTAAAATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAAACAGCGTTTCGTTCCAGATATGGGCACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCCTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTGGCAGGTTATTATCGACGGTTTGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAAATATTGACGGATCATAAAAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGTAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCGGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTCGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGCCGTCAGACAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCATAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAAGATCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACTCTGAGGGGTTTCACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAGTCAGCGCACTTCATTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTATGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCCTATAATAACAGCTATCAGGCTACCATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTAG

Coding sequence (CDS)

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCAAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAAGATCAACGATCTATTTGACCAGTTACAGGGAGCCACAGTATTCTCTAAAATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAAACAGCGTTTCGTTCCAGATATGGGCACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCCTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTGGCAGGTTATTATCGACGGTTTGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAAATATTGACGGATCATAAAAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGTAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCGGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTCGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGCCGTCAGACAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCATAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAAGATCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACTCTGAGGGGTTTCACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAGTCAGCGCACTTCATTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTATGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCCTATAATAACAGCTATCAGGCTACCATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTAG

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC

Homology

[Close]

BLAST of Cmc04g0108141 vs. NCBI nr
Match: KAA0037817.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1281.9 bits (3316), Expect = 0.0e+00
Identity = 640/707 (90.52%), Postives = 651/707 (92.08%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 442  MAPAELKELKVQLQELLDKGFIRPSLSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 501

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 502  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFCLT 561

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 562  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 621

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR----- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR     
Sbjct: 622  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRKACED 681

Query: 241  -----------------------------------------FGKVVAYASRQLKSHEQNY 300
                                                      GKVVAYASRQLKSHEQNY
Sbjct: 682  SFENLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNY 741

Query: 301  PTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDC 360
            PTHDLELAA+VFALKIWRHYLYGEKIQI T HKSLKYFFTQKELNMRQRRWLELVKDYDC
Sbjct: 742  PTHDLELAAMVFALKIWRHYLYGEKIQIFTIHKSLKYFFTQKELNMRQRRWLELVKDYDC 801

Query: 361  EILYHPGKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQP 420
            EILYHPGK NVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQLAQLT+QP
Sbjct: 802  EILYHPGKANVVADALSRKVSHSAALITRQAHLHRDLERAEIAVSVGAVTMQLAQLTIQP 861

Query: 421  TLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAVKTELLSE 480
            TLRQR IDAQ NDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSAVKTELLSE
Sbjct: 862  TLRQRTIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSE 921

Query: 481  AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS 540
            AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS
Sbjct: 922  AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS 981

Query: 541  IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEI 600
            IP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEI
Sbjct: 982  IPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEI 1041

Query: 601  VRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSMAFHPQTDGQTERLNQVLEDMLR 660
            V+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFS+AFHPQTDGQTERLNQVLEDMLR
Sbjct: 1042 VKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSIAFHPQTDGQTERLNQVLEDMLR 1101

Query: 661  ACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC 662
            ACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
Sbjct: 1102 ACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC 1148

[Close]

BLAST of Cmc04g0108141 vs. NCBI nr
Match: KAA0053368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 646/732 (88.25%), Postives = 651/732 (88.93%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 768  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 827

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 828  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 887

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 888  NAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 947

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 948  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1007

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1008 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSDASKKGL 1067

Query: 301  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                    KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL
Sbjct: 1068 GCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQISTDHKSL 1127

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1128 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1187

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQAEGFSISS
Sbjct: 1188 DLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISS 1247

Query: 481  DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGL FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1248 DGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1307

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1308 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1367

Query: 601  KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KS HF+PGKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 1368 KSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 1427

Query: 661  FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
            FS AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 1428 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1487

[Close]

BLAST of Cmc04g0108141 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 643/732 (87.84%), Postives = 651/732 (88.93%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                   GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGL+FERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHF+PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLD
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLD 1239

Query: 661  FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
            FS AFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFE
Sbjct: 1240 FSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFE 1299

[Close]

BLAST of Cmc04g0108141 vs. NCBI nr
Match: KAA0040188.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1277.7 bits (3305), Expect = 0.0e+00
Identity = 642/732 (87.70%), Postives = 650/732 (88.80%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 705  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 764

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 765  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 824

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 825  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFS 884

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 885  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 944

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 945  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1004

Query: 301  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                   GKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQI TDHKSL
Sbjct: 1005 GFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIFTDHKSL 1064

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITR APLHR
Sbjct: 1065 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRHAPLHR 1124

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
            DLERAEIAVSVGA+TMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQAEGFSISS
Sbjct: 1125 DLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISS 1184

Query: 481  DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLVFERRLCVPSDSA+K ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1185 DGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMKREVAEF 1244

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1245 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1304

Query: 601  KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHF+PGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLD
Sbjct: 1305 KSAHFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWKGLQTAMGTRLD 1364

Query: 661  FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
            FS AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 1365 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1424

[Close]

BLAST of Cmc04g0108141 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1275.8 bits (3300), Expect = 0.0e+00
Identity = 640/732 (87.43%), Postives = 651/732 (88.93%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+I+DLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                  GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
           DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGL+FERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

Query: 601 KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
           KSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 698 KSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 757

Query: 661 FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
           FS AFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 758 FSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 817

[Close]

BLAST of Cmc04g0108141 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-109
Identity = 227/733 (30.97%), Postives = 372/733 (50.75%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I  L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F    
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  LTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAAL 420
            LTDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+      +  
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKR 899

Query: 481  QAEGFSISSDGGLVFER-RLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 540
              E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W
Sbjct: 900  VEENIQL-KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

Query: 541  RNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT 600
            + +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Sbjct: 960  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYN 1019

Query: 601  VIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKG 653
             ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+ WK 
Sbjct: 1020 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1079

[Close]

BLAST of Cmc04g0108141 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-109
Identity = 227/733 (30.97%), Postives = 372/733 (50.75%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I  L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F    
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  LTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAAL 420
            LTDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+      +  
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKR 899

Query: 481  QAEGFSISSDGGLVFER-RLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 540
              E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W
Sbjct: 900  VEENIQL-KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

Query: 541  RNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT 600
            + +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Sbjct: 960  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYN 1019

Query: 601  VIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKG 653
             ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+ WK 
Sbjct: 1020 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1079

[Close]

BLAST of Cmc04g0108141 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-109
Identity = 227/733 (30.97%), Postives = 372/733 (50.75%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I  L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F    
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  LTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAAL 420
            LTDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+      +  
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKR 899

Query: 481  QAEGFSISSDGGLVFER-RLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 540
              E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W
Sbjct: 900  VEENIQL-KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

Query: 541  RNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT 600
            + +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Sbjct: 960  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYN 1019

Query: 601  VIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKG 653
             ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+ WK 
Sbjct: 1020 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1079

[Close]

BLAST of Cmc04g0108141 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-109
Identity = 227/733 (30.97%), Postives = 372/733 (50.75%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I  L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F    
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  LTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAAL 420
            LTDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+      +  
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKR 899

Query: 481  QAEGFSISSDGGLVFER-RLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 540
              E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W
Sbjct: 900  VEENIQL-KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

Query: 541  RNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT 600
            + +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Sbjct: 960  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYN 1019

Query: 601  VIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKG 653
             ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+ WK 
Sbjct: 1020 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1079

[Close]

BLAST of Cmc04g0108141 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-109
Identity = 227/733 (30.97%), Postives = 372/733 (50.75%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I  L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F    
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  LTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAAL 420
            LTDH++L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+      +  
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKR 899

Query: 481  QAEGFSISSDGGLVFER-RLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 540
              E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W
Sbjct: 900  VEENIQL-KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

Query: 541  RNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT 600
            + +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Sbjct: 960  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYN 1019

Query: 601  VIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKG 653
             ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+ WK 
Sbjct: 1020 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1079

[Close]

BLAST of Cmc04g0108141 vs. ExPASy TrEMBL
Match: A0A5A7T8B6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4066G00070 PE=4 SV=1)

HSP 1 Score: 1281.9 bits (3316), Expect = 0.0e+00
Identity = 640/707 (90.52%), Postives = 651/707 (92.08%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 442  MAPAELKELKVQLQELLDKGFIRPSLSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 501

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 502  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFCLT 561

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 562  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 621

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR----- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR     
Sbjct: 622  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRKACED 681

Query: 241  -----------------------------------------FGKVVAYASRQLKSHEQNY 300
                                                      GKVVAYASRQLKSHEQNY
Sbjct: 682  SFENLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNY 741

Query: 301  PTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDC 360
            PTHDLELAA+VFALKIWRHYLYGEKIQI T HKSLKYFFTQKELNMRQRRWLELVKDYDC
Sbjct: 742  PTHDLELAAMVFALKIWRHYLYGEKIQIFTIHKSLKYFFTQKELNMRQRRWLELVKDYDC 801

Query: 361  EILYHPGKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQP 420
            EILYHPGK NVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQLAQLT+QP
Sbjct: 802  EILYHPGKANVVADALSRKVSHSAALITRQAHLHRDLERAEIAVSVGAVTMQLAQLTIQP 861

Query: 421  TLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAVKTELLSE 480
            TLRQR IDAQ NDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSAVKTELLSE
Sbjct: 862  TLRQRTIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSE 921

Query: 481  AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS 540
            AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS
Sbjct: 922  AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS 981

Query: 541  IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMSEI 600
            IP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEI
Sbjct: 982  IPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEI 1041

Query: 601  VRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSMAFHPQTDGQTERLNQVLEDMLR 660
            V+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFS+AFHPQTDGQTERLNQVLEDMLR
Sbjct: 1042 VKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSIAFHPQTDGQTERLNQVLEDMLR 1101

Query: 661  ACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC 662
            ACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
Sbjct: 1102 ACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC 1148

[Close]

BLAST of Cmc04g0108141 vs. ExPASy TrEMBL
Match: A0A5A7UE75 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00240 PE=4 SV=1)

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 646/732 (88.25%), Postives = 651/732 (88.93%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 768  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 827

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 828  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 887

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 888  NAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 947

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 948  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1007

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1008 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSDASKKGL 1067

Query: 301  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                    KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL
Sbjct: 1068 GCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQISTDHKSL 1127

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1128 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1187

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQAEGFSISS
Sbjct: 1188 DLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISS 1247

Query: 481  DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGL FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1248 DGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1307

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1308 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1367

Query: 601  KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KS HF+PGKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 1368 KSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 1427

Query: 661  FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
            FS AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 1428 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1487

[Close]

BLAST of Cmc04g0108141 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 643/732 (87.84%), Postives = 651/732 (88.93%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                   GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGL+FERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHF+PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLD
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLD 1239

Query: 661  FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
            FS AFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFE
Sbjct: 1240 FSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFE 1299

[Close]

BLAST of Cmc04g0108141 vs. ExPASy TrEMBL
Match: A0A5A7TB42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00260 PE=4 SV=1)

HSP 1 Score: 1277.7 bits (3305), Expect = 0.0e+00
Identity = 642/732 (87.70%), Postives = 650/732 (88.80%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 705  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 764

Query: 61   YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP+I+DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 765  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 824

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 825  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFS 884

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 885  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 944

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 945  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1004

Query: 301  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                   GKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQI TDHKSL
Sbjct: 1005 GFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIFTDHKSL 1064

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITR APLHR
Sbjct: 1065 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRHAPLHR 1124

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
            DLERAEIAVSVGA+TMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQAEGFSISS
Sbjct: 1125 DLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISS 1184

Query: 481  DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLVFERRLCVPSDSA+K ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1185 DGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMKREVAEF 1244

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1245 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1304

Query: 601  KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHF+PGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLD
Sbjct: 1305 KSAHFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWKGLQTAMGTRLD 1364

Query: 661  FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
            FS AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 1365 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1424

[Close]

BLAST of Cmc04g0108141 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1275.8 bits (3300), Expect = 0.0e+00
Identity = 640/732 (87.43%), Postives = 651/732 (88.93%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPKINDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP+I+DLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF---- 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF    
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSL 360
                  GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKVNVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISS 480
           DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLVFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGL+FERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

Query: 601 KSAHFIPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
           KSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 698 KSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 757

Query: 661 FSMAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 662
           FS AFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 758 FSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 817

[Close]

BLAST of Cmc04g0108141 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 5.4e-18
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 162 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 221
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLAGYYRRF----GKVVAYASRQLKSHEQNYPTHDLELAAVVF-ALK 270
            +E+R FLGL GYYRRF    GK+V   +  LK +   +     E+AA+ F ALK
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKW----TEMAALAFKALK 113

The following BLAST results are available for this feature:

BLAST of Cmc04g0108141 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037817.1	0.0e+00	90.52	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053368.1	0.0e+00	88.25	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	0.0e+00	87.84	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040188.1	0.0e+00	87.70	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	0.0e+00	87.43	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0108141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.3e-109	30.97	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-109	30.97	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.3e-109	30.97	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.3e-109	30.97	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.3e-109	30.97	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0108141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8B6	0.0e+00	90.52	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5A7UE75	0.0e+00	88.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold42...	[more]
A0A5A7U330	0.0e+00	87.84	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7TB42	0.0e+00	87.70	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]
A0A5A7UP94	0.0e+00	87.43	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]

BLAST of Cmc04g0108141 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.4e-18	44.35	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 238..312 e-value: 2.7E-26 score: 91.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 9.4E-87 score: 291.8
None	No IPR available	GENE3D	1.10.340.70		coord: 390..480 e-value: 3.7E-18 score: 67.6
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 15..238 coord: 240..657
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 237..334 e-value: 1.9096E-49 score: 166.514
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.25905E-95 score: 290.266
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 490..661 e-value: 1.8E-45 score: 156.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..335 e-value: 5.6E-11 score: 44.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 9.4E-87 score: 291.8
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 425..481 e-value: 2.9E-17 score: 62.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 1.9E-28 score: 99.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.376495
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 492..655 score: 18.854795
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 493..651
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0108141.1	Cmc04g0108141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding