Cmc04g0107591 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCATCATCTCCTTTGAAGAAAAGTAATAATAGTAATGAAAGGTCCATCACTGAAGTAAAATTAGAAGATTTACCAGCAGATCCTGGTCTAAGGATTAGAATTCTTGATTACAATTGTAATATTCGTGATGAAGTTCGTAGAGCATATCTACAAAAAGGACCTTGCCAACCTCGAAATCATACTTTTCCGTTGAAGAAATTCGGGTCACAGTCAAGAAGATTTAATCCAATTTGGTTTACTGGATATCCTAATTGGTTGGAATATAGTATTTCAAAAGATGCTGCCTACTGTTTATGTTGTTATTTATTCAAACAAGAAGTTGGAGAACAATCAGGACGTGACCATTTTGTTGGTGAAGGATTTTCAAATTGGAAGAAAAAAGAGAAATTGCAAACTCATGTTGGAGGACCAAATAGTGCACATAACCAAGCTTGGGGCAAATGTGAAGCTCTTTTAAATCAAAAACAACCAATTGCAACATTTTTTAATAAGATGTCTAATCAAGCAAGAATTGACTATCAGATTTGA ATGGAACCATCATCTCCTTTGAAGAAAAGTAATAATAGTAATGAAAGGTCCATCACTGAAGTAAAATTAGAAGATTTACCAGCAGATCCTGGTCTAAGGATTAGAATTCTTGATTACAATTGTAATATTCGTGATGAAGTTCGTAGAGCATATCTACAAAAAGGACCTTGCCAACCTCGAAATCATACTTTTCCGTTGAAGAAATTCGGGTCACAGTCAAGAAGATTTAATCCAATTTGGTTTACTGGATATCCTAATTGGTTGGAATATAGTATTTCAAAAGATGCTGCCTACTGTTTATGTTGTTATTTATTCAAACAAGAAGTTGGAGAACAATCAGGACGTGACCATTTTGTTGGTGAAGGATTTTCAAATTGGAAGAAAAAAGAGAAATTGCAAACTCATGTTGGAGGACCAAATAGTGCACATAACCAAGCTTGGGGCAAATGTGAAGCTCTTTTAAATCAAAAACAACCAATTGCAACATTTTTTAATAAGATGTCTAATCAAGCAAGAATTGACTATCAGATTTGA ATGGAACCATCATCTCCTTTGAAGAAAAGTAATAATAGTAATGAAAGGTCCATCACTGAAGTAAAATTAGAAGATTTACCAGCAGATCCTGGTCTAAGGATTAGAATTCTTGATTACAATTGTAATATTCGTGATGAAGTTCGTAGAGCATATCTACAAAAAGGACCTTGCCAACCTCGAAATCATACTTTTCCGTTGAAGAAATTCGGGTCACAGTCAAGAAGATTTAATCCAATTTGGTTTACTGGATATCCTAATTGGTTGGAATATAGTATTTCAAAAGATGCTGCCTACTGTTTATGTTGTTATTTATTCAAACAAGAAGTTGGAGAACAATCAGGACGTGACCATTTTGTTGGTGAAGGATTTTCAAATTGGAAGAAAAAAGAGAAATTGCAAACTCATGTTGGAGGACCAAATAGTGCACATAACCAAGCTTGGGGCAAATGTGAAGCTCTTTTAAATCAAAAACAACCAATTGCAACATTTTTTAATAAGATGTCTAATCAAGCAAGAATTGACTATCAGATTTGA MEPSSPLKKSNNSNERSITEVKLEDLPADPGLRIRILDYNCNIRDEVRRAYLQKGPCQPRNHTFPLKKFGSQSRRFNPIWFTGYPNWLEYSISKDAAYCLCCYLFKQEVGEQSGRDHFVGEGFSNWKKKEKLQTHVGGPNSAHNQAWGKCEALLNQKQPIATFFNKMSNQARIDYQI Homology
BLAST of Cmc04g0107591 vs. NCBI nr
Match: XP_021799956.1 (zinc finger MYM-type protein 1-like, partial [Prunus avium]) HSP 1 Score: 259.6 bits (662), Expect = 1.9e-65 Identity = 116/177 (65.54%), Postives = 144/177 (81.36%), Query Frame = 0
BLAST of Cmc04g0107591 vs. NCBI nr
Match: XP_008245511.1 (PREDICTED: zinc finger MYM-type protein 1-like [Prunus mume]) HSP 1 Score: 248.8 bits (634), Expect = 3.4e-62 Identity = 111/169 (65.68%), Postives = 133/169 (78.70%), Query Frame = 0
BLAST of Cmc04g0107591 vs. NCBI nr
Match: XP_012854489.1 (PREDICTED: zinc finger MYM-type protein 1-like [Erythranthe guttata]) HSP 1 Score: 247.7 bits (631), Expect = 7.7e-62 Identity = 111/172 (64.53%), Postives = 133/172 (77.33%), Query Frame = 0
BLAST of Cmc04g0107591 vs. NCBI nr
Match: XP_028091346.1 (zinc finger MYM-type protein 1-like [Camellia sinensis]) HSP 1 Score: 247.3 bits (630), Expect = 1.0e-61 Identity = 115/178 (64.61%), Postives = 137/178 (76.97%), Query Frame = 0
BLAST of Cmc04g0107591 vs. NCBI nr
Match: XP_012835791.1 (PREDICTED: zinc finger MYM-type protein 1-like [Erythranthe guttata]) HSP 1 Score: 242.3 bits (617), Expect = 3.2e-60 Identity = 106/167 (63.47%), Postives = 130/167 (77.84%), Query Frame = 0
BLAST of Cmc04g0107591 vs. ExPASy TrEMBL
Match: A0A6P5RGN5 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110744291 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 9.4e-66 Identity = 116/177 (65.54%), Postives = 144/177 (81.36%), Query Frame = 0
BLAST of Cmc04g0107591 vs. ExPASy TrEMBL
Match: M5X9M6 (TTF-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa026809mg PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.7e-62 Identity = 113/174 (64.94%), Postives = 134/174 (77.01%), Query Frame = 0
BLAST of Cmc04g0107591 vs. ExPASy TrEMBL
Match: A0A6P8C3P9 (zinc finger MYM-type protein 1 OS=Punica granatum OX=22663 GN=LOC116193539 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55 Identity = 98/177 (55.37%), Postives = 133/177 (75.14%), Query Frame = 0
BLAST of Cmc04g0107591 vs. ExPASy TrEMBL
Match: A0A2G9HL30 (Tam3-transposase (Ac family) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09097 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55 Identity = 104/182 (57.14%), Postives = 129/182 (70.88%), Query Frame = 0
BLAST of Cmc04g0107591 vs. ExPASy TrEMBL
Match: A0A6P5TRV9 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110769922 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.8e-54 Identity = 105/177 (59.32%), Postives = 127/177 (71.75%), Query Frame = 0
BLAST of Cmc04g0107591 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 163.7 bits (413), Expect = 1.4e-40 Identity = 77/159 (48.43%), Postives = 99/159 (62.26%), Query Frame = 0
BLAST of Cmc04g0107591 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 151.8 bits (382), Expect = 5.3e-37 Identity = 70/138 (50.72%), Postives = 86/138 (62.32%), Query Frame = 0
BLAST of Cmc04g0107591 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 104.4 bits (259), Expect = 9.7e-23 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of Cmc04g0107591 vs. TAIR 10
Match: AT2G06541.2 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 104.4 bits (259), Expect = 9.7e-23 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of Cmc04g0107591 vs. TAIR 10
Match: AT1G42710.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 45.4 bits (106), Expect = 5.4e-05 Identity = 23/50 (46.00%), Postives = 29/50 (58.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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