Cmc04g0107091 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0107091
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr04: 25489355 .. 25490092 (+)
RNA-Seq ExpressionCmc04g0107091
SyntenyCmc04g0107091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCCTAGTCTGCGTTTATCTACAACATCAGGCATTGCATTAGATGATGAGGATGCTTCTTCATATATAAGACTAATCGGGAGACTATTGTACCTACAAATCTCAAGGCCAAACATTTCCTACTGTGTTCACAAGCTTAGTCAATTCTTGGCTAAACCTCATACTGAACACATAATAGCAGCGCATCACTTGCTACGCTACCTAAAAGGCACATCAGGACAAGGTATAATGCTTTGGGCCTCAAAAGAATTTAACATCAAAGTCTTTGTTGACTCAGATTGGGGATGTTGTTTAGACACTCGAAAATCTATCACTGGCTTTTGCATCTTTCTTGAAAAATCCCTTGTATCATGGAAAACCAAGAAGCAAGCCACGGTTTCACGCTCATCGGCAGAAGCAGAATACAGAGCTTTAGCAAGTGTATCAAGTGAGATTACATGGCTAACTCATCTACTTCAAAACTTTCAAATTCCTCATCAAGAACCAGCCTTAATATACTGTGATAACCGTGCAGCCATATCTATTGCTTCTAATCCGACATTCCATGAGCGTACCAAACACATTGAAATAGACTGCCATTTCATTCATGATAAAATTCAACAAGGACAACAAAAACTTCTATCCATTAAATCTTCACATCAACTAGCTGACATGTTCACTAAGCCACTGCCTTCATCTACTATCCATGAGTTTATGTTCAAGATGGGAATCCGTAATCTCCATACTCCATCTTGA

mRNA sequence

ATGGTGCCTAGTCTGCGTTTATCTACAACATCAGGCATTGCATTAGATGATGAGGATGCTTCTTCATATATAAGACTAATCGGGAGACTATTGTACCTACAAATCTCAAGGCCAAACATTTCCTACTGTGTTCACAAGCTTAGTCAATTCTTGGCTAAACCTCATACTGAACACATAATAGCAGCGCATCACTTGCTACGCTACCTAAAAGGCACATCAGGACAAGGTATAATGCTTTGGGCCTCAAAAGAATTTAACATCAAAGTCTTTGTTGACTCAGATTGGGGATGTTGTTTAGACACTCGAAAATCTATCACTGGCTTTTGCATCTTTCTTGAAAAATCCCTTGTATCATGGAAAACCAAGAAGCAAGCCACGGTTTCACGCTCATCGGCAGAAGCAGAATACAGAGCTTTAGCAAGTGTATCAAGTGAGATTACATGGCTAACTCATCTACTTCAAAACTTTCAAATTCCTCATCAAGAACCAGCCTTAATATACTGTGATAACCGTGCAGCCATATCTATTGCTTCTAATCCGACATTCCATGAGCGTACCAAACACATTGAAATAGACTGCCATTTCATTCATGATAAAATTCAACAAGGACAACAAAAACTTCTATCCATTAAATCTTCACATCAACTAGCTGACATGTTCACTAAGCCACTGCCTTCATCTACTATCCATGAGTTTATGTTCAAGATGGGAATCCGTAATCTCCATACTCCATCTTGA

Coding sequence (CDS)

ATGGTGCCTAGTCTGCGTTTATCTACAACATCAGGCATTGCATTAGATGATGAGGATGCTTCTTCATATATAAGACTAATCGGGAGACTATTGTACCTACAAATCTCAAGGCCAAACATTTCCTACTGTGTTCACAAGCTTAGTCAATTCTTGGCTAAACCTCATACTGAACACATAATAGCAGCGCATCACTTGCTACGCTACCTAAAAGGCACATCAGGACAAGGTATAATGCTTTGGGCCTCAAAAGAATTTAACATCAAAGTCTTTGTTGACTCAGATTGGGGATGTTGTTTAGACACTCGAAAATCTATCACTGGCTTTTGCATCTTTCTTGAAAAATCCCTTGTATCATGGAAAACCAAGAAGCAAGCCACGGTTTCACGCTCATCGGCAGAAGCAGAATACAGAGCTTTAGCAAGTGTATCAAGTGAGATTACATGGCTAACTCATCTACTTCAAAACTTTCAAATTCCTCATCAAGAACCAGCCTTAATATACTGTGATAACCGTGCAGCCATATCTATTGCTTCTAATCCGACATTCCATGAGCGTACCAAACACATTGAAATAGACTGCCATTTCATTCATGATAAAATTCAACAAGGACAACAAAAACTTCTATCCATTAAATCTTCACATCAACTAGCTGACATGTTCACTAAGCCACTGCCTTCATCTACTATCCATGAGTTTATGTTCAAGATGGGAATCCGTAATCTCCATACTCCATCTTGA

Protein sequence

MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHIIAAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWKTKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNPTFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRNLHTPS
Homology
BLAST of Cmc04g0107091 vs. NCBI nr
Match: KAA0065481.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08722.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 496.1 bits (1276), Expect = 1.7e-136
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFL KPHTEHII
Sbjct: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLVKPHTEHII 60

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK
Sbjct: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP
Sbjct: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN
Sbjct: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240

Query: 241 LHTPS 246
           LHTPS
Sbjct: 241 LHTPS 245

BLAST of Cmc04g0107091 vs. NCBI nr
Match: XP_016902992.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 8.5e-120
Identity = 219/245 (89.39%), Postives = 227/245 (92.65%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           MVPSLRLSTTSG ALDDEDASSY RLIGRLLYLQISRP++SY VHKLSQFLA+PHTEH+I
Sbjct: 1   MVPSLRLSTTSGNALDDEDASSYRRLIGRLLYLQISRPDVSYYVHKLSQFLARPHTEHLI 60

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           A HHLLRYLKGT+ QGIMLWASKEFNIKVFVD DW CCLDT+KSITGFCIFLEKSLVSWK
Sbjct: 61  AVHHLLRYLKGTTRQGIMLWASKEFNIKVFVDLDWRCCLDTKKSITGFCIFLEKSLVSWK 120

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           TKKQAT SRSS EA+YR L SVSSEITWLTHLLQ+ QIPHQEPALIYCDNRA ISIASNP
Sbjct: 121 TKKQATFSRSSTEAKYRGLTSVSSEITWLTHLLQDLQIPHQEPALIYCDNRATISIASNP 180

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEID HFI DKIQQGQQKLLSIKSSHQLA MFTKPLPSSTIHEFMFKM IRN
Sbjct: 181 TFHERTKHIEIDSHFICDKIQQGQQKLLSIKSSHQLAHMFTKPLPSSTIHEFMFKMEIRN 240

Query: 241 LHTPS 246
           LHT S
Sbjct: 241 LHTSS 245

BLAST of Cmc04g0107091 vs. NCBI nr
Match: KAA0057703.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27489.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 8.5e-120
Identity = 219/245 (89.39%), Postives = 227/245 (92.65%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           MVPSLRLSTTSG ALDDEDASSY RLIGRLLYLQISRP++SY VHKLSQFLA+PHTEH+I
Sbjct: 647 MVPSLRLSTTSGNALDDEDASSYRRLIGRLLYLQISRPDVSYYVHKLSQFLARPHTEHLI 706

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           A HHLLRYLKGT+ QGIMLWASKEFNIKVFVD DW CCLDT+KSITGFCIFLEKSLVSWK
Sbjct: 707 AVHHLLRYLKGTTRQGIMLWASKEFNIKVFVDLDWRCCLDTKKSITGFCIFLEKSLVSWK 766

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           TKKQAT SRSS EA+YR L SVSSEITWLTHLLQ+ QIPHQEPALIYCDNRA ISIASNP
Sbjct: 767 TKKQATFSRSSTEAKYRGLTSVSSEITWLTHLLQDLQIPHQEPALIYCDNRATISIASNP 826

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEID HFI DKIQQGQQKLLSIKSSHQLA MFTKPLPSSTIHEFMFKM IRN
Sbjct: 827 TFHERTKHIEIDSHFICDKIQQGQQKLLSIKSSHQLAHMFTKPLPSSTIHEFMFKMEIRN 886

Query: 241 LHTPS 246
           LHT S
Sbjct: 887 LHTSS 891

BLAST of Cmc04g0107091 vs. NCBI nr
Match: XP_031745923.1 (uncharacterized protein LOC116406346 [Cucumis sativus] >XP_031745939.1 uncharacterized protein LOC116406359 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 2.2e-83
Identity = 151/245 (61.63%), Postives = 196/245 (80.00%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           M P+L+L  + G  L +EDA+ Y RLIGRL+YLQISRP+I + VH+LSQFL KP   H+ 
Sbjct: 166 MDPNLKLCKSEGEQLTEEDATCYRRLIGRLIYLQISRPDICFSVHRLSQFLHKPTKHHLD 225

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           AAHHLL+YLKG+ GQG+++     F++K FVD+DWG CLDTR+S+TGFCIFL  S++SWK
Sbjct: 226 AAHHLLKYLKGSPGQGVLIKPIDSFHLKAFVDADWGSCLDTRRSVTGFCIFLGDSIISWK 285

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           +KKQ TVSRSSAEAEYRAL SV+SE+ W+T LL +F+I    P  ++CDN+AAI+IASNP
Sbjct: 286 SKKQPTVSRSSAEAEYRALTSVTSELVWITQLLTDFKIKTLMPTTVFCDNQAAIAIASNP 345

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEIDCHF+ DKI +G  K+L I +S QLADMFTK LPSST++  + K+G+++
Sbjct: 346 TFHERTKHIEIDCHFVRDKIIEGFLKVLPINTSLQLADMFTKALPSSTLNRHISKLGMKD 405

Query: 241 LHTPS 246
           +H P+
Sbjct: 406 IHRPT 410

BLAST of Cmc04g0107091 vs. NCBI nr
Match: XP_031744313.1 (uncharacterized protein LOC116404977 [Cucumis sativus])

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-83
Identity = 150/245 (61.22%), Postives = 197/245 (80.41%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           M P+L+L  + G  L +EDA+ Y RLIGRL+YLQISRP+I + VH+LSQFL KP   H+ 
Sbjct: 166 MDPNLKLCKSEGEQLIEEDATCYRRLIGRLIYLQISRPDICFSVHRLSQFLHKPTKHHLD 225

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           AAHHLL+YLKG+SGQG+++     F++K FV +DWG CLDTR+S+TGFCIFL  S++SWK
Sbjct: 226 AAHHLLKYLKGSSGQGVLIKPIDSFHLKAFVVADWGSCLDTRRSVTGFCIFLGDSIISWK 285

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           +KKQ TVSRSSAEAEYRALASV+SE+ W+T LL +F++    P  ++CDN+AAI+I SNP
Sbjct: 286 SKKQPTVSRSSAEAEYRALASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAAIAIDSNP 345

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEIDCHF+ DKI +G  K+L I +S QLADMFTK LPSST++ ++ K+G+++
Sbjct: 346 TFHERTKHIEIDCHFVRDKIVEGFLKVLPINTSLQLADMFTKALPSSTLNRYISKLGMKD 405

Query: 241 LHTPS 246
           +H P+
Sbjct: 406 IHRPT 410

BLAST of Cmc04g0107091 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-47
Identity = 99/238 (41.60%), Postives = 138/238 (57.98%), Query Frame = 0

Query: 1    MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
            M PS +LS  SG  L   D + Y  ++G L YL  +RP+ISY V++LSQF+  P  EH+ 
Sbjct: 1225 MAPSPKLSLYSGTKL--TDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQ 1284

Query: 61   AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
            A   +LRYL GT   GI L      ++  + D+DW    D   S  G+ ++L    +SW 
Sbjct: 1285 ALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWS 1344

Query: 121  TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
            +KKQ  V RSS EAEYR++A+ SSE+ W+  LL    I    P +IYCDN  A  + +NP
Sbjct: 1345 SKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANP 1404

Query: 181  TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGI 239
             FH R KHI ID HFI +++Q G  +++ + +  QLAD  TKPL  +    F  K+G+
Sbjct: 1405 VFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460

BLAST of Cmc04g0107091 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.7e-44
Identity = 93/238 (39.08%), Postives = 135/238 (56.72%), Query Frame = 0

Query: 1    MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
            M  S +L+  SG  L   D + Y  ++G L YL  +RP++SY V++LSQ++  P  +H  
Sbjct: 1208 MATSPKLTLHSGTKL--PDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWN 1267

Query: 61   AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
            A   +LRYL GT   GI L      ++  + D+DW    D   S  G+ ++L    +SW 
Sbjct: 1268 ALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWS 1327

Query: 121  TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
            +KKQ  V RSS EAEYR++A+ SSE+ W+  LL    I    P +IYCDN  A  + +NP
Sbjct: 1328 SKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANP 1387

Query: 181  TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGI 239
             FH R KHI +D HFI +++Q G  +++ + +  QLAD  TKPL       F  K+G+
Sbjct: 1388 VFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443

BLAST of Cmc04g0107091 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-35
Identity = 90/227 (39.65%), Postives = 135/227 (59.47%), Query Frame = 0

Query: 17   DEDASSYIR-LIGRLLYLQI-SRPNISYCVHKLSQFLAKPHTEHIIAAHHLLRYLKGTSG 76
            DED ++  R LIG L+Y+ + +RP+++  V+ LS++ +K ++E       +LRYLKGT  
Sbjct: 1174 DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTID 1233

Query: 77   QGIMLWASKEFNIKV--FVDSDWGCCLDTRKSITGFCI-FLEKSLVSWKTKKQATVSRSS 136
              ++   +  F  K+  +VDSDW      RKS TG+     + +L+ W TK+Q +V+ SS
Sbjct: 1234 MKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASS 1293

Query: 137  AEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNPTFHERTKHIEI 196
             EAEY AL     E  WL  LL +  I  + P  IY DN+  ISIA+NP+ H+R KHI+I
Sbjct: 1294 TEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDI 1353

Query: 197  DCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGI 239
              HF  +++Q     L  I + +QLAD+FTKPLP++   E   K+G+
Sbjct: 1354 KYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

BLAST of Cmc04g0107091 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.1e-32
Identity = 73/204 (35.78%), Postives = 116/204 (56.86%), Query Frame = 0

Query: 23   YIRLIGRLLYLQI-SRPNISYCVHKLSQFLAKPHTEHIIAAHHLLRYLKGTSGQGIMLWA 82
            Y   +G L+Y  + +RP+I++ V  +S+FL  P  EH  A   +LRYL+GT+G  +    
Sbjct: 1111 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1170

Query: 83   SKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWKTKKQATVSRSSAEAEYRALAS 142
            S    +K + D+D    +D RKS TG+        +SW++K Q  V+ S+ EAEY A   
Sbjct: 1171 SDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATE 1230

Query: 143  VSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNPTFHERTKHIEIDCHFIHDKIQ 202
               E+ WL   LQ   + HQ+  ++YCD+++AI ++ N  +H RTKHI++  H+I + + 
Sbjct: 1231 TGKEMIWLKRFLQELGL-HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVD 1290

Query: 203  QGQQKLLSIKSSHQLADMFTKPLP 226
                K+L I ++   ADM TK +P
Sbjct: 1291 DESLKVLKISTNENPADMLTKVVP 1312

BLAST of Cmc04g0107091 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 0

Query: 19  DASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHIIAAHHLLRYLKGTSGQGIM 78
           D S +  ++G L YL ++RP+ISY V+ + Q + +P          +LRY+KGT   G+ 
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 79  LWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWKTKKQATVSRSSAEAEYRA 138
           +  + + N++ F DSDW  C  TR+S TGFC FL  +++SW  K+Q TVSRSS E EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 139 LASVSSEITW 149
           LA  ++E+TW
Sbjct: 216 LALTAAELTW 225

BLAST of Cmc04g0107091 vs. ExPASy TrEMBL
Match: A0A5D3CBP3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00270 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.3e-137
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFL KPHTEHII
Sbjct: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLVKPHTEHII 60

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK
Sbjct: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP
Sbjct: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN
Sbjct: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240

Query: 241 LHTPS 246
           LHTPS
Sbjct: 241 LHTPS 245

BLAST of Cmc04g0107091 vs. ExPASy TrEMBL
Match: A0A5D3DVP4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00430 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.1e-120
Identity = 219/245 (89.39%), Postives = 227/245 (92.65%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           MVPSLRLSTTSG ALDDEDASSY RLIGRLLYLQISRP++SY VHKLSQFLA+PHTEH+I
Sbjct: 647 MVPSLRLSTTSGNALDDEDASSYRRLIGRLLYLQISRPDVSYYVHKLSQFLARPHTEHLI 706

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           A HHLLRYLKGT+ QGIMLWASKEFNIKVFVD DW CCLDT+KSITGFCIFLEKSLVSWK
Sbjct: 707 AVHHLLRYLKGTTRQGIMLWASKEFNIKVFVDLDWRCCLDTKKSITGFCIFLEKSLVSWK 766

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           TKKQAT SRSS EA+YR L SVSSEITWLTHLLQ+ QIPHQEPALIYCDNRA ISIASNP
Sbjct: 767 TKKQATFSRSSTEAKYRGLTSVSSEITWLTHLLQDLQIPHQEPALIYCDNRATISIASNP 826

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEID HFI DKIQQGQQKLLSIKSSHQLA MFTKPLPSSTIHEFMFKM IRN
Sbjct: 827 TFHERTKHIEIDSHFICDKIQQGQQKLLSIKSSHQLAHMFTKPLPSSTIHEFMFKMEIRN 886

Query: 241 LHTPS 246
           LHT S
Sbjct: 887 LHTSS 891

BLAST of Cmc04g0107091 vs. ExPASy TrEMBL
Match: A0A1S4E444 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991991 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.1e-120
Identity = 219/245 (89.39%), Postives = 227/245 (92.65%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           MVPSLRLSTTSG ALDDEDASSY RLIGRLLYLQISRP++SY VHKLSQFLA+PHTEH+I
Sbjct: 1   MVPSLRLSTTSGNALDDEDASSYRRLIGRLLYLQISRPDVSYYVHKLSQFLARPHTEHLI 60

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           A HHLLRYLKGT+ QGIMLWASKEFNIKVFVD DW CCLDT+KSITGFCIFLEKSLVSWK
Sbjct: 61  AVHHLLRYLKGTTRQGIMLWASKEFNIKVFVDLDWRCCLDTKKSITGFCIFLEKSLVSWK 120

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           TKKQAT SRSS EA+YR L SVSSEITWLTHLLQ+ QIPHQEPALIYCDNRA ISIASNP
Sbjct: 121 TKKQATFSRSSTEAKYRGLTSVSSEITWLTHLLQDLQIPHQEPALIYCDNRATISIASNP 180

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIEID HFI DKIQQGQQKLLSIKSSHQLA MFTKPLPSSTIHEFMFKM IRN
Sbjct: 181 TFHERTKHIEIDSHFICDKIQQGQQKLLSIKSSHQLAHMFTKPLPSSTIHEFMFKMEIRN 240

Query: 241 LHTPS 246
           LHT S
Sbjct: 241 LHTSS 245

BLAST of Cmc04g0107091 vs. ExPASy TrEMBL
Match: A0A2P5FNK4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_049120 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 7.1e-80
Identity = 151/245 (61.63%), Postives = 186/245 (75.92%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           M P L+LSTT G  L   DAS+Y   IGRLLYL +S P+I++ VHKLSQFL++P   H+ 
Sbjct: 1   MDPKLKLSTTEGDLL--PDASAYRCFIGRLLYLTLSHPDITFAVHKLSQFLSRPRLPHLK 60

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           AAHHLLRYLK   GQG+   AS    +K F D+DWG C DTRKS+TGFCIFL  SLVSWK
Sbjct: 61  AAHHLLRYLKHRPGQGLFFSASSSLQVKAFSDADWGSCPDTRKSVTGFCIFLGDSLVSWK 120

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
            KKQ+T+SRSSAEAEYRALA+ +SEI  L +LL +FQ+    PAL++CDN+AAI IASNP
Sbjct: 121 AKKQSTISRSSAEAEYRALAATTSEILCLQNLLHDFQLVVSSPALLFCDNQAAIYIASNP 180

Query: 181 TFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIRN 240
           TFHERTKHIE+DCHF+ DK+ QG  KLL I+S HQLAD+FTKPL SS +   + KM + +
Sbjct: 181 TFHERTKHIELDCHFVRDKVSQGSVKLLPIRSQHQLADIFTKPLSSSLLFPLLSKMAVHD 240

Query: 241 LHTPS 246
           +++PS
Sbjct: 241 IYSPS 243

BLAST of Cmc04g0107091 vs. ExPASy TrEMBL
Match: A0A2N9HPY5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41695 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 6.2e-76
Identity = 139/246 (56.50%), Postives = 185/246 (75.20%), Query Frame = 0

Query: 1    MVPSLRLSTTSGIALDD-EDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHI 60
            M  +L+LS T G  LDD +D + Y RL+GRLLYL ++RP++SY V KLSQF+AKP T H+
Sbjct: 941  MEQNLKLSETDGSLLDDLDDPAVYRRLVGRLLYLTMTRPDLSYSVQKLSQFMAKPTTSHL 1000

Query: 61   IAAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSW 120
             AAH +LRY+KG+ GQG+   +S    +K F DSDW  C DTR+S+TG+C+FL  SL+SW
Sbjct: 1001 TAAHKVLRYIKGSPGQGLFFSSSNNLQLKSFSDSDWASCPDTRRSVTGYCVFLGNSLISW 1060

Query: 121  KTKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASN 180
            K+KKQ T+SRSSAEAEYRA+A+V  E+ WL  LL+NFQI H + AL++CD++AAI IA+N
Sbjct: 1061 KSKKQHTISRSSAEAEYRAMAAVVCELMWLIPLLKNFQIIHSQEALLFCDSQAAIHIAAN 1120

Query: 181  PTFHERTKHIEIDCHFIHDKIQQGQQKLLSIKSSHQLADMFTKPLPSSTIHEFMFKMGIR 240
            P +HERTKHIE+DCH I +KIQ+G  + L + S +QLAD+ TKPL S   H  + KMG+ 
Sbjct: 1121 PVYHERTKHIELDCHLIREKIQEGLVRTLHVISQNQLADLMTKPLGSHQFHSLVNKMGLH 1180

Query: 241  NLHTPS 246
            N++ PS
Sbjct: 1181 NIYAPS 1186

BLAST of Cmc04g0107091 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 202.2 bits (513), Expect = 4.8e-52
Identity = 101/199 (50.75%), Postives = 134/199 (67.34%), Query Frame = 0

Query: 1   MVPSLRLSTTSGIALDDEDASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHII 60
           M PS+  S  SG   D  DA +Y RLIGRL+YLQI+R +IS+ V+KLSQF   P   H  
Sbjct: 358 MDPSVTFSAHSG--GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQ 417

Query: 61  AAHHLLRYLKGTSGQGIMLWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWK 120
           A   +L Y+KGT GQG+   +  E  ++VF D+ +  C DTR+S  G+C+FL  SL+SWK
Sbjct: 418 AVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWK 477

Query: 121 TKKQATVSRSSAEAEYRALASVSSEITWLTHLLQNFQIPHQEPALIYCDNRAAISIASNP 180
           +KKQ  VS+SSAEAEYRAL+  + E+ WL    +  Q+P  +P L++CDN AAI IA+N 
Sbjct: 478 SKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNA 537

Query: 181 TFHERTKHIEIDCHFIHDK 200
            FHERTKHIE DCH + ++
Sbjct: 538 VFHERTKHIESDCHSVRER 554

BLAST of Cmc04g0107091 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-27
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 0

Query: 19  DASSYIRLIGRLLYLQISRPNISYCVHKLSQFLAKPHTEHIIAAHHLLRYLKGTSGQGIM 78
           D S +  ++G L YL ++RP+ISY V+ + Q + +P          +LRY+KGT   G+ 
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 79  LWASKEFNIKVFVDSDWGCCLDTRKSITGFCIFLEKSLVSWKTKKQATVSRSSAEAEYRA 138
           +  + + N++ F DSDW  C  TR+S TGFC FL  +++SW  K+Q TVSRSS E EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 139 LASVSSEITW 149
           LA  ++E+TW
Sbjct: 216 LALTAAELTW 225

BLAST of Cmc04g0107091 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-17
Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 0

Query: 31  LYLQISRPNISYCVHKLSQFLAKPHTEHIIAAHHLLRYLKGTSGQGIMLWASKEFNIKVF 90
           +YL I+RP++++ V++LSQF +   T  + A + +L Y+KGT GQG+   A+ +  +K F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 91  VDSDWGCCLDTRKSITGFC 110
            DSDW  C DTR+S+TGFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065481.11.7e-13699.59putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08722.1 putative m... [more]
XP_016902992.18.5e-12089.39PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
KAA0057703.18.5e-12089.39putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27489.1 putative m... [more]
XP_031745923.12.2e-8361.63uncharacterized protein LOC116406346 [Cucumis sativus] >XP_031745939.1 uncharact... [more]
XP_031744313.16.4e-8361.22uncharacterized protein LOC116404977 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q94HW21.5e-4741.60Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.7e-4439.08Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041461.8e-3539.65Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109789.1e-3235.78Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P925191.5e-2643.85Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5D3CBP38.3e-13799.59Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3DVP44.1e-12089.39Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S4E4444.1e-12089.39uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
A0A2P5FNK47.1e-8061.63Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_049120 PE=4 SV... [more]
A0A2N9HPY56.2e-7656.50Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41695 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G23160.14.8e-5250.75cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.1e-2743.85DNA/RNA polymerases superfamily protein [more]
ATMG00240.13.8e-1745.57Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 110..232
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 110..232
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 88..226
e-value: 2.54789E-75
score: 222.729
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 21..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0107091.1Cmc04g0107091.1mRNA