Cmc04g0096681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0096681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr04: 11192118 .. 11194493 (-)
RNA-Seq Expression	Cmc04g0096681
Synteny	Cmc04g0096681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAGTGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTAGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCAATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGATTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATCGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

mRNA sequence

ATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAGTGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTAGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCAATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGATTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATCGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAGTGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTAGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCAATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGATTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATCGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Protein sequence

MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

Homology

[Close]

BLAST of Cmc04g0096681 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1588.5 bits (4112), Expect = 0.0e+00
Identity = 788/791 (99.62%), Postives = 790/791 (99.87%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 445  MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 504

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR
Sbjct: 505  PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN
Sbjct: 565  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 624

Query: 181  ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
            ATFLEEDHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR
Sbjct: 625  ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
            SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV
Sbjct: 685  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
            WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK
Sbjct: 745  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 804

Query: 361  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
            SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 805  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 864

Query: 421  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
            LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT
Sbjct: 865  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 924

Query: 481  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
            DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRY MQNSKKGLL
Sbjct: 925  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLL 984

Query: 541  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
            PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP
Sbjct: 985  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 1044

Query: 601  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
            GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG
Sbjct: 1045 GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 1104

Query: 661  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
            AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 1105 AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 1164

Query: 721  VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 780
            VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL
Sbjct: 1165 VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 1224

Query: 781  ESLGLRDMYIR 792
            ESLGLRDMYIR
Sbjct: 1225 ESLGLRDMYIR 1235

[Close]

BLAST of Cmc04g0096681 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1588.5 bits (4112), Expect = 0.0e+00
Identity = 788/791 (99.62%), Postives = 790/791 (99.87%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 319  MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 378

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR
Sbjct: 379  PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 438

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN
Sbjct: 439  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 498

Query: 181  ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
            ATFLEEDHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR
Sbjct: 499  ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 558

Query: 241  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
            SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV
Sbjct: 559  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 618

Query: 301  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
            WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK
Sbjct: 619  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 678

Query: 361  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
            SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 679  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 738

Query: 421  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
            LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT
Sbjct: 739  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 798

Query: 481  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
            DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRY MQNSKKGLL
Sbjct: 799  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLL 858

Query: 541  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
            PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP
Sbjct: 859  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 918

Query: 601  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
            GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG
Sbjct: 919  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 978

Query: 661  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
            AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 979  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 1038

Query: 721  VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 780
            VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL
Sbjct: 1039 VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 1098

Query: 781  ESLGLRDMYIR 792
            ESLGLRDMYIR
Sbjct: 1099 ESLGLRDMYIR 1109

[Close]

BLAST of Cmc04g0096681 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1566.2 bits (4054), Expect = 0.0e+00
Identity = 776/791 (98.10%), Postives = 784/791 (99.12%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            MEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQLSAPGT
Sbjct: 445  MEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGT 504

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR
Sbjct: 505  PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTN
Sbjct: 565  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTN 624

Query: 181  ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
            ATFLEEDHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR
Sbjct: 625  ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
            SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV
Sbjct: 685  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
            WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLK
Sbjct: 745  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLK 804

Query: 361  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
            SIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 805  SIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 864

Query: 421  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
            LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT
Sbjct: 865  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 924

Query: 481  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
            DVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRY MQNSKKGLL
Sbjct: 925  DVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLL 984

Query: 541  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
            PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP
Sbjct: 985  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 1044

Query: 601  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
            GLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGG
Sbjct: 1045 GLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGG 1104

Query: 661  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
            AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL+KFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 1105 AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGA 1164

Query: 721  VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 780
            VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL
Sbjct: 1165 VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 1224

Query: 781  ESLGLRDMYIR 792
            ESLGLRDMYIR
Sbjct: 1225 ESLGLRDMYIR 1235

[Close]

BLAST of Cmc04g0096681 vs. NCBI nr
Match: KAA0033121.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1430.6 bits (3702), Expect = 0.0e+00
Identity = 707/748 (94.52%), Postives = 728/748 (97.33%), Query Frame = 0


Query: 1   MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           MEHKSEALEKFKEYK EVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQ QLSAPGT
Sbjct: 55  MEHKSEALEKFKEYKNEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQIQLSAPGT 114

Query: 61  PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
           PQQ+GV ERRNRT+LDMVRSMMSYAQLPSSFWGYAVETAVHILNNV SKSVSETPFELWR
Sbjct: 115 PQQNGVLERRNRTMLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWR 174

Query: 121 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
           GRKPSLSHF+I GCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQ+NRV VSTN
Sbjct: 175 GRKPSLSHFKILGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTN 234

Query: 181 ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
           ATFLEEDHMR+HKP++KLVL+EA D+STRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRR
Sbjct: 235 ATFLEEDHMRDHKPQNKLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRR 294

Query: 241 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
           SGR+VSQPNRYLGLTETQVVIPDDGVEDPLSY QAMNDVDKDQWVKAMDLEMESMYFN +
Sbjct: 295 SGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLM 354

Query: 301 WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
           WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK
Sbjct: 355 WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 414

Query: 361 SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
           SIRILLSIATFYDYEIW+MDV TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 415 SIRILLSIATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 474

Query: 421 LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
           LKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKV FLVLYVDDILLIGNDVGYLT
Sbjct: 475 LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLT 534

Query: 481 DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
           DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLL
Sbjct: 535 DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLL 594

Query: 541 PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
           PFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY + CTR +ICYAV IVSRYQSN 
Sbjct: 595 PFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVSRYQSNL 654

Query: 601 GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
           GLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQT+KDSRKSTS SVFTLNGG
Sbjct: 655 GLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTNKDSRKSTSRSVFTLNGG 714

Query: 661 AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
           A+VWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 715 AIVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 774

Query: 721 VANSKEPRSHKRGKHIERKYHLIREIVQ 749
           VANSKEPRSHKR KHIERKYHLI+EIVQ
Sbjct: 775 VANSKEPRSHKREKHIERKYHLIQEIVQ 802

[Close]

BLAST of Cmc04g0096681 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1329.7 bits (3440), Expect = 0.0e+00
Identity = 654/792 (82.58%), Postives = 714/792 (90.15%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            M+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI SQLSAPGT
Sbjct: 547  MQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT 606

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAV+ILN VPSKSVSETP +LW 
Sbjct: 607  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWN 666

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N+VFVSTN
Sbjct: 667  GRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTN 726

Query: 181  ATFLEEDHMRNHKPRSKLVLS----EATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLR 240
            ATFLEEDH+R HKPRSK+VL+    E T+ STRVV+E    +RV    +S ++H  QSLR
Sbjct: 727  ATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR 786

Query: 241  MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 300
             PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM+LE+ESMY
Sbjct: 787  EPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMY 846

Query: 301  FNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPV 360
            FNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDYEETFSPV
Sbjct: 847  FNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV 906

Query: 361  AMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNR 420
            AMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+I+M QPEGFI  GQEQK+CKLNR
Sbjct: 907  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNR 966

Query: 421  SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV 480
            SIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDILLIGND+
Sbjct: 967  SIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI 1026

Query: 481  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSK 540
            G LTD+K WLA QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+Y MQNSK
Sbjct: 1027 GLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK 1086

Query: 541  KGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRY 600
            +GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICYAVGIVSRY
Sbjct: 1087 RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRY 1146

Query: 601  QSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFT 660
            QSNPGL HWTAVK +LKYLRRTRDY LVYG+KDLILTGYTDSDFQTD+DSRKSTSGSVFT
Sbjct: 1147 QSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFT 1206

Query: 661  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCD 720
            LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR FL DLEVVPNM+ PITLYCD
Sbjct: 1207 LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCD 1266

Query: 721  NSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVF 780
            NSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT+IAS HN+ADPFTK LTAKVF
Sbjct: 1267 NSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVF 1326

Query: 781  EGHLESLGLRDM 789
            EGHLESLGLRDM
Sbjct: 1327 EGHLESLGLRDM 1338

[Close]

BLAST of Cmc04g0096681 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 5.5e-179
Identity = 340/815 (41.72%), Postives = 503/815 (61.72%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            ++ K +  + F+++   VE    +K+K LRSD GGEY    F++Y   HGI+ + + PGT
Sbjct: 519  LKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGT 578

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELW 120
            PQ +GV+ER NRT+++ VRSM+  A+LP SFWG AV+TA +++N  PS  ++ E P  +W
Sbjct: 579  PQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVW 638

Query: 121  RGRKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFV 180
              ++ S SH +++GC   AHV      KL+ +S  C F+GY  E  G   +DP + +V  
Sbjct: 639  TNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIR 698

Query: 181  STNATFLEEDHM----RNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQ----- 240
            S +  F E +       + K ++ ++ +  T  ST   +     S  DE +  G+     
Sbjct: 699  SRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTS-NNPTSAESTTDEVSEQGEQPGEV 758

Query: 241  --------------SHPSQSLRMP---RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLS 300
                           HP+Q        RRS R   +  RY   +   V+I DD   +P S
Sbjct: 759  IEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY--PSTEYVLISDD--REPES 818

Query: 301  YKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQT 360
             K+ ++  +K+Q +KAM  EMES+  N  ++LV+LP+G +P+ CKW++K K+D   K+  
Sbjct: 819  LKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVR 878

Query: 361  FKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLE 420
            +KARLV KG+ Q++G+D++E FSPV  + SIR +LS+A   D E+ Q+DVKTAFL+G+LE
Sbjct: 879  YKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLE 938

Query: 421  ESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY 480
            E I+M QPEGF   G++  VCKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY
Sbjct: 939  EEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVY 998

Query: 481  -KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDR 540
             K+ ++     L+LYVDD+L++G D G +  +K  L+  F MKDLG AQ +LG++I+R+R
Sbjct: 999  FKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRER 1058

Query: 541  KNKTLALSQATYIDKLLVRYLMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYAS 600
             ++ L LSQ  YI+++L R+ M+N+K    P    + LSK+  P T +E  +M ++PY+S
Sbjct: 1059 TSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSS 1118

Query: 601  AVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDL 660
            AVGSLMYAM+CTRPDI +AVG+VSR+  NPG +HW AVK +L+YLR T    L +G  D 
Sbjct: 1119 AVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDP 1178

Query: 661  ILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE 720
            IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE
Sbjct: 1179 ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKE 1238

Query: 721  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRG 780
             +WL++FL +L +         +YCD+  A+  SK    H R KHI+ +YH IRE+V   
Sbjct: 1239 MIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDE 1298

Query: 781  DVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL 786
             + V KI++  N AD  TK +    FE   E +G+
Sbjct: 1299 SLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc04g0096681 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 426.4 bits (1095), Expect = 7.0e-118
Identity = 276/897 (30.77%), Postives = 450/897 (50.17%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            +++KS+    F+++  + E   + K+  L  D G EY+    + + ++ GI   L+ P T
Sbjct: 519  IKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHT 578

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSV---SETPFE 120
            PQ +GVSER  RT+ +  R+M+S A+L  SFWG AV TA +++N +PS+++   S+TP+E
Sbjct: 579  PQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYE 638

Query: 121  LWRGRKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFVGYPKETRGGLFFDPQENRVF 180
            +W  +KP L H R++G   +V + N + K + +S    FVGY  E  G   +D    +  
Sbjct: 639  MWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFI 698

Query: 181  VSTNATFLEEDHMRNHKPRSKLVL----SEATDK-----STRVVDEVGP--SSRVDETTT 240
            V+ +    E + + +   + + V      E+ +K     S +++    P  S   D    
Sbjct: 699  VARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQF 758

Query: 241  SGQSHPSQSLRMPRRSGRVV--------------------SQPNRYL------------- 300
               S  S++   P  S +++                     + N+Y              
Sbjct: 759  LKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHL 818

Query: 301  ------------GLTETQVVIPDDGVEDP---------------------LSYKQ----- 360
                          +ET   + + G+++P                     +SY +     
Sbjct: 819  NESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSL 878

Query: 361  ---------AMNDV-----------DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIG 420
                       NDV           DK  W +A++ E+ +   N+ W +   PE    + 
Sbjct: 879  NKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVD 938

Query: 421  CKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDY 480
             +W++  K +  G    +KARLVA+G+TQ+  +DYEETF+PVA + S R +LS+   Y+ 
Sbjct: 939  SRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNL 998

Query: 481  EIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDT 540
            ++ QMDVKTAFLNG L+E I+M  P+G         VCKLN++IYGLKQA+R W   F+ 
Sbjct: 999  KVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQ 1058

Query: 541  AIKSYGFDQNVDEPCVY--KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQM 600
            A+K   F  +  + C+Y   K N  +  +++LYVDD+++   D+  + + K +L  +F+M
Sbjct: 1059 ALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRM 1118

Query: 601  KDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLLPFRHGVHLSKEQ 660
             DL E ++ +GI+I  + +   + LSQ+ Y+ K+L ++ M+N      P    ++     
Sbjct: 1119 TDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLN 1178

Query: 661  SPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVL 720
            S       ++    P  S +G LMY MLCTRPD+  AV I+SRY S    + W  +K VL
Sbjct: 1179 S-------DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVL 1238

Query: 721  KYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSIK 780
            +YL+ T D  L++    A +  + GY DSD+   +  RKST+G +F + +   + W + +
Sbjct: 1239 RYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKR 1298

Query: 781  QGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPR 786
            Q  +A S+ EAEY+A  EA +EA+WL+  L  + +   +  PI +Y DN G ++ +  P 
Sbjct: 1299 QNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNPS 1358

[Close]

BLAST of Cmc04g0096681 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-107
Identity = 273/917 (29.77%), Postives = 426/917 (46.46%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            ++ KS+  + F  +K+ VEN    +I  L SD GGE++ LR  DY+ +HGI    S P T
Sbjct: 540  LKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHT 599

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELW 120
            P+ +G+SER++R +++M  +++S+A +P ++W YA   AV+++N +P+  +  ++PF+  
Sbjct: 600  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 659

Query: 121  RGRKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFV 180
             G+ P+    +++GC  +  +   N  KLE +S+ C F+GY       L       R++ 
Sbjct: 660  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 719

Query: 181  STNATFLEE----------------------DHMRNHK--PRSKLVL------------- 240
            S +  F E                        +  +H   P + LVL             
Sbjct: 720  SRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTS 779

Query: 241  -----SEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQS--------------------L 300
                 S +   +T+V     PSS +   ++S  + PS +                    L
Sbjct: 780  PRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPIL 839

Query: 301  RMPRRSGRVVSQPNRYLGLTETQVVIP--------------------------------- 360
              P  +    + PN+   L ++ +  P                                 
Sbjct: 840  NNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPP 899

Query: 361  -------------------DDGVEDP---LSY----------KQAMNDVDKDQWVKAMDL 420
                                DG+  P    SY          + A+  +  D+W +AM  
Sbjct: 900  IIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGS 959

Query: 421  EMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDY 480
            E+ +   N  W+LV   P  V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY
Sbjct: 960  EINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDY 1019

Query: 481  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ 540
             ETFSPV    SIRI+L +A    + I Q+DV  AFL G L + ++MSQP GF+ + +  
Sbjct: 1020 AETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPD 1079

Query: 541  KVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDI 600
             VC+L ++IYGLKQA R+W +   T + + GF  ++ +  ++       + ++++YVDDI
Sbjct: 1080 YVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDI 1139

Query: 601  LLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVR 660
            L+ GND   L      L+ +F +K+  +  Y LGI+    R  + L LSQ  Y   LL R
Sbjct: 1140 LITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLAR 1199

Query: 661  YLMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYA 720
              M  +K    P      L+     K P   E      Y   VGSL Y +  TRPD+ YA
Sbjct: 1200 TNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYA 1259

Query: 721  VGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRK 780
            V  +S+Y   P  DHW A+K VL+YL  T D+ + +     L L  Y+D+D+  D D   
Sbjct: 1260 VNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYV 1319

Query: 781  STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMN 786
            ST+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   L +L +   ++
Sbjct: 1320 STNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLS 1379

[Close]

BLAST of Cmc04g0096681 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-105
Identity = 270/913 (29.57%), Postives = 408/913 (44.69%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            ++ KS+  E F  +K  +EN    +I    SD GGE++ L   +Y  +HGI    S P T
Sbjct: 561  LKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHT 620

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELW 120
            P+ +G+SER++R +++   +++S+A +P ++W YA   AV+++N +P+  +  E+PF+  
Sbjct: 621  PEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKL 680

Query: 121  RGRKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFV 180
             G  P+    R++GC  +  +   N  KL+ +SR C F+GY       L    Q +R+++
Sbjct: 681  FGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYI 740

Query: 181  STNATFLEE-----------DHMRNHKPRSKLVLSEATDKSTR----------------- 240
            S +  F E              ++  +  S  V S  T   TR                 
Sbjct: 741  SRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAAT 800

Query: 241  ----------------------------------VVDEVGPSSRVDETTTSGQSHPS--- 300
                                                 + GP      T T  Q+H S   
Sbjct: 801  PPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNT 860

Query: 301  --------------QSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMND 360
                          QSL  P +S      P      + T    P   +  P    Q +N+
Sbjct: 861  SQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNN 920

Query: 361  --------------------------------------------VDKDQWVKAMDLEMES 420
                                                        +  ++W  AM  E+ +
Sbjct: 921  NNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINA 980

Query: 421  MYFNSVWELVDLPEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETF 480
               N  W+LV  P   V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY ETF
Sbjct: 981  QIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETF 1040

Query: 481  SPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCK 540
            SPV    SIRI+L +A    + I Q+DV  AFL G L + ++MSQP GFI + +   VCK
Sbjct: 1041 SPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCK 1100

Query: 541  LNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIG 600
            L +++YGLKQA R+W +     + + GF  +V +  ++       + ++++YVDDIL+ G
Sbjct: 1101 LRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITG 1160

Query: 601  NDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQ 660
            ND   L +    L+ +F +KD  E  Y LGI+    R    L LSQ  YI  LL R  M 
Sbjct: 1161 NDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMI 1220

Query: 661  NSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIV 720
             +K    P      LS     K     E      Y   VGSL Y +  TRPDI YAV  +
Sbjct: 1221 TAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRL 1280

Query: 721  SRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSG 780
            S++   P  +H  A+K +L+YL  T ++ + +     L L  Y+D+D+  DKD   ST+G
Sbjct: 1281 SQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNG 1340

Query: 781  SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPIT 786
             +  L    + W S KQ  +  S+ EAEY +    + E  W+   L +L +   +  P  
Sbjct: 1341 YIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTRPPV 1400

[Close]

BLAST of Cmc04g0096681 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-36
Identity = 106/314 (33.76%), Postives = 147/314 (46.82%), Query Frame = 0


Query: 379 MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 438
           MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 439 YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 498
            GF ++  E  +Y +       ++ +YVDD+L+          VK  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 499 QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLLPFRHGVHLSKEQSPKTPQ 558
              LG+  I    N  + LS   YI K      +   K    P  +   L +  SP    
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180

Query: 559 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 618
            ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + VL+YL  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 619 RDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST 678
           R   L Y     L LT Y D+      D   ST G V  L G  V W S K +G I   +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 679 MEAEYVAACEAAKE 691
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

[Close]

BLAST of Cmc04g0096681 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 1588.5 bits (4112), Expect = 0.0e+00
Identity = 788/791 (99.62%), Postives = 790/791 (99.87%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 445  MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 504

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR
Sbjct: 505  PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN
Sbjct: 565  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 624

Query: 181  ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
            ATFLEEDHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR
Sbjct: 625  ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
            SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV
Sbjct: 685  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
            WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK
Sbjct: 745  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 804

Query: 361  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
            SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 805  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 864

Query: 421  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
            LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT
Sbjct: 865  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 924

Query: 481  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
            DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRY MQNSKKGLL
Sbjct: 925  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLL 984

Query: 541  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
            PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP
Sbjct: 985  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 1044

Query: 601  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
            GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG
Sbjct: 1045 GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 1104

Query: 661  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
            AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 1105 AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 1164

Query: 721  VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 780
            VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL
Sbjct: 1165 VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 1224

Query: 781  ESLGLRDMYIR 792
            ESLGLRDMYIR
Sbjct: 1225 ESLGLRDMYIR 1235

[Close]

BLAST of Cmc04g0096681 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 1588.5 bits (4112), Expect = 0.0e+00
Identity = 788/791 (99.62%), Postives = 790/791 (99.87%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 319  MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 378

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR
Sbjct: 379  PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 438

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN
Sbjct: 439  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 498

Query: 181  ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
            ATFLEEDHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR
Sbjct: 499  ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 558

Query: 241  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
            SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV
Sbjct: 559  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 618

Query: 301  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
            WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK
Sbjct: 619  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 678

Query: 361  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
            SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 679  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 738

Query: 421  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
            LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT
Sbjct: 739  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 798

Query: 481  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
            DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRY MQNSKKGLL
Sbjct: 799  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLL 858

Query: 541  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
            PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP
Sbjct: 859  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 918

Query: 601  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
            GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG
Sbjct: 919  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 978

Query: 661  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
            AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 979  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 1038

Query: 721  VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 780
            VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL
Sbjct: 1039 VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 1098

Query: 781  ESLGLRDMYIR 792
            ESLGLRDMYIR
Sbjct: 1099 ESLGLRDMYIR 1109

[Close]

BLAST of Cmc04g0096681 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 1566.2 bits (4054), Expect = 0.0e+00
Identity = 776/791 (98.10%), Postives = 784/791 (99.12%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            MEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQLSAPGT
Sbjct: 445  MEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGT 504

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR
Sbjct: 505  PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTN
Sbjct: 565  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTN 624

Query: 181  ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
            ATFLEEDHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR
Sbjct: 625  ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
            SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV
Sbjct: 685  SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
            WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLK
Sbjct: 745  WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLK 804

Query: 361  SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
            SIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 805  SIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 864

Query: 421  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
            LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT
Sbjct: 865  LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 924

Query: 481  DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
            DVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRY MQNSKKGLL
Sbjct: 925  DVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLL 984

Query: 541  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
            PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP
Sbjct: 985  PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 1044

Query: 601  GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
            GLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGG
Sbjct: 1045 GLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGG 1104

Query: 661  AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
            AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL+KFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 1105 AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGA 1164

Query: 721  VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 780
            VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL
Sbjct: 1165 VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHL 1224

Query: 781  ESLGLRDMYIR 792
            ESLGLRDMYIR
Sbjct: 1225 ESLGLRDMYIR 1235

[Close]

BLAST of Cmc04g0096681 vs. ExPASy TrEMBL
Match: A0A5D3CZY3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00460 PE=4 SV=1)

HSP 1 Score: 1430.6 bits (3702), Expect = 0.0e+00
Identity = 707/748 (94.52%), Postives = 728/748 (97.33%), Query Frame = 0


Query: 1   MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           MEHKSEALEKFKEYK EVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQ QLSAPGT
Sbjct: 55  MEHKSEALEKFKEYKNEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQIQLSAPGT 114

Query: 61  PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
           PQQ+GV ERRNRT+LDMVRSMMSYAQLPSSFWGYAVETAVHILNNV SKSVSETPFELWR
Sbjct: 115 PQQNGVLERRNRTMLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWR 174

Query: 121 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
           GRKPSLSHF+I GCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQ+NRV VSTN
Sbjct: 175 GRKPSLSHFKILGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTN 234

Query: 181 ATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 240
           ATFLEEDHMR+HKP++KLVL+EA D+STRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRR
Sbjct: 235 ATFLEEDHMRDHKPQNKLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRR 294

Query: 241 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 300
           SGR+VSQPNRYLGLTETQVVIPDDGVEDPLSY QAMNDVDKDQWVKAMDLEMESMYFN +
Sbjct: 295 SGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLM 354

Query: 301 WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 360
           WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK
Sbjct: 355 WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLK 414

Query: 361 SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 420
           SIRILLSIATFYDYEIW+MDV TAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG
Sbjct: 415 SIRILLSIATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 474

Query: 421 LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 480
           LKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKV FLVLYVDDILLIGNDVGYLT
Sbjct: 475 LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLT 534

Query: 481 DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLL 540
           DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLL
Sbjct: 535 DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLL 594

Query: 541 PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 600
           PFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY + CTR +ICYAV IVSRYQSN 
Sbjct: 595 PFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVSRYQSNL 654

Query: 601 GLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGG 660
           GLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQT+KDSRKSTS SVFTLNGG
Sbjct: 655 GLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTNKDSRKSTSRSVFTLNGG 714

Query: 661 AVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 720
           A+VWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA
Sbjct: 715 AIVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGA 774

Query: 721 VANSKEPRSHKRGKHIERKYHLIREIVQ 749
           VANSKEPRSHKR KHIERKYHLI+EIVQ
Sbjct: 775 VANSKEPRSHKREKHIERKYHLIQEIVQ 802

[Close]

BLAST of Cmc04g0096681 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1329.7 bits (3440), Expect = 0.0e+00
Identity = 654/792 (82.58%), Postives = 714/792 (90.15%), Query Frame = 0


Query: 1    MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
            M+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI SQLSAPGT
Sbjct: 548  MQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT 607

Query: 61   PQQSGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 120
            PQQ+GVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAV+ILN VPSKSVSETP +LW 
Sbjct: 608  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWN 667

Query: 121  GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 180
            GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N+VFVSTN
Sbjct: 668  GRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTN 727

Query: 181  ATFLEEDHMRNHKPRSKLVLS----EATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLR 240
            ATFLEEDH+R HKPRSK+VL+    E T+ STRVV+E    +RV    +S ++H  QSLR
Sbjct: 728  ATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR 787

Query: 241  MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 300
             PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM+LE+ESMY
Sbjct: 788  EPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMY 847

Query: 301  FNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPV 360
            FNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDYEETFSPV
Sbjct: 848  FNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV 907

Query: 361  AMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNR 420
            AMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+I+M QPEGFI  GQEQK+CKLNR
Sbjct: 908  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNR 967

Query: 421  SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV 480
            SIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDILLIGND+
Sbjct: 968  SIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI 1027

Query: 481  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSK 540
            G LTD+K WLA QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+Y MQNSK
Sbjct: 1028 GLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK 1087

Query: 541  KGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRY 600
            +GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICYAVGIVSRY
Sbjct: 1088 RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRY 1147

Query: 601  QSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFT 660
            QSNPGL HWTAVK +LKYLRRTRDY LVYG+KDLILTGYTDSDFQTD+DSRKSTSGSVFT
Sbjct: 1148 QSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFT 1207

Query: 661  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCD 720
            LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR FL DLEVVPNM+ PITLYCD
Sbjct: 1208 LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCD 1267

Query: 721  NSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVF 780
            NSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT+IAS HN+ADPFTK LTAKVF
Sbjct: 1268 NSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVF 1327

Query: 781  EGHLESLGLRDM 789
            EGHLESLGLRDM
Sbjct: 1328 EGHLESLGLRDM 1339

[Close]

BLAST of Cmc04g0096681 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 305.8 bits (782), Expect = 9.9e-83
Identity = 175/484 (36.16%), Postives = 275/484 (56.82%), Query Frame = 0


Query: 267 EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSA 326
           ++P +Y +A   +    W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 327 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 386
           G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 387 NGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 446
           NG+L+E I+M  P G+   QG       VC L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 447 QNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL 506
           Q+  +   + KI       +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 507 GIQIIRDRKNKTLALSQATYIDKLLVRYLMQNSKKGLLPFRHGVHLSKEQSPKTPQEVED 566
           G++I R      + + Q  Y   LL    +   K   +P    V  S         +  D
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVD 383

Query: 567 MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYM 626
            +   Y   +G LMY  + TR DI +AV  +S++   P L H  AV  +L Y++ T    
Sbjct: 384 AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 627 LVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 686
           L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    + W+S KQ  ++ S+ EAEY
Sbjct: 444 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 687 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 746
            A   A  E +WL +F  +L++   ++ P  L+CDN+ A+  +     H+R KHIE   H
Sbjct: 504 RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553

[Close]

BLAST of Cmc04g0096681 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-21
Identity = 79/234 (33.76%), Postives = 115/234 (49.15%), Query Frame = 0


Query: 461 FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA 520
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 521 TYIDKLLVRYLMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAML 580
            Y +++L    M + K    P    + L+   S     +  D R     S VG+L Y  L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFR-----SIVGALQYLTL 121

Query: 581 CTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSD 640
            TRPDI YAV IV +    P L  +  +K VL+Y++ T  + + ++    L +  + DSD
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 181

Query: 641 FQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 694
           +     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc04g0096681 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-15
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 237 MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 296
           M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++ 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALS 60

Query: 297 FNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPV 356
            N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q EG+ + ET+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 357 AMLKSIRILLSIA 370
               +IR +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]

BLAST of Cmc04g0096681 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 6.5e-10
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 71  NRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHF 130
           NRT+++ VRSM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 131 RIWGCPAHVLVTNPKKLEPRSR 152
           R +GC A++   +  KL+PR++
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

[Close]

BLAST of Cmc04g0096681 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 44.3 bits (103), Expect = 5.3e-04
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 582 TRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGA-KDLILTGYTDSDF 641
           TRPD+ +AV  +S++ S        AV  VL Y++ T    L Y A  DL L  + DSD+
Sbjct: 6   TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDW 65

Query: 642 QTDKDSRKSTSG 653
            +  D+R+S +G
Sbjct: 66  ASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of Cmc04g0096681 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	0.0e+00	99.62	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	0.0e+00	99.62	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	0.0e+00	98.10	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0033121.1	0.0e+00	94.52	gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis ...	[more]
KAA0048404.1	0.0e+00	82.58	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0096681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.5e-179	41.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.0e-118	30.77	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.1e-107	29.77	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.8e-105	29.57	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	4.0e-36	33.76	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc04g0096681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	0.0e+00	99.62	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	0.0e+00	99.62	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	0.0e+00	98.10	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5D3CZY3	0.0e+00	94.52	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G004...	[more]
A0A5A7SMH8	0.0e+00	82.58	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]

BLAST of Cmc04g0096681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	9.9e-83	36.16	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.8e-21	33.76	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.8e-15	36.09	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	6.5e-10	39.02	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00240.1	5.3e-04	37.50	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..242
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..244 coord: 267..625
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 633..774 e-value: 1.88616E-66 score: 215.025
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 298..540 e-value: 2.3E-74 score: 250.0
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 3..131 e-value: 1.5E-26 score: 94.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..123 score: 17.87594
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 298..741
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 4..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0096681.1	Cmc04g0096681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding